Metagenome / Metatranscriptome Family F089202

Basic Information
Family ID	F089202
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	42 residues
Representative Sequence	MKNAGMKIKHPKLRGEWAELRFMTRAAEHGLCVTKPWGE
Number of Associated Samples	93
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.67 %
% of genes near scaffold ends (potentially truncated)	94.50 %
% of genes from short scaffolds (< 2000 bps)	87.16 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Most Common Taxonomy
Group	Bacteria (87.156 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.349 % of family members)
Environment Ontology (ENVO)	Unclassified (25.688 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.303 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.84% β-sheet: 0.00% Coil/Unstructured: 67.16%
Feature Viewer

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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF02604	PhdYeFM_antitox	2.75
PF01642	MM_CoA_mutase	1.83
PF01541	GIY-YIG	1.83
PF13302	Acetyltransf_3	1.83
PF01381	HTH_3	1.83
PF12762	DDE_Tnp_IS1595	1.83
PF12760	Zn_Tnp_IS1595	1.83
PF07883	Cupin_2	1.83
PF00670	AdoHcyase_NAD	1.83
PF00575	S1	0.92
PF02597	ThiS	0.92
PF01797	Y1_Tnp	0.92
PF12867	DinB_2	0.92
PF00773	RNB	0.92
PF03129	HGTP_anticodon	0.92
PF01569	PAP2	0.92
PF11645	PDDEXK_5	0.92
PF15780	ASH	0.92
PF02371	Transposase_20	0.92
PF05163	DinB	0.92
PF13517	FG-GAP_3	0.92
PF13671	AAA_33	0.92
PF01011	PQQ	0.92
PF03989	DNA_gyraseA_C	0.92
PF00296	Bac_luciferase	0.92
PF05221	AdoHcyase	0.92
PF13413	HTH_25	0.92
PF14534	DUF4440	0.92
PF03745	DUF309	0.92
PF13424	TPR_12	0.92
PF05198	IF3_N	0.92
PF13520	AA_permease_2	0.92
PF10017	Methyltransf_33	0.92
PF00483	NTP_transferase	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0499	S-adenosylhomocysteine hydrolase	Coenzyme transport and metabolism [H]	2.75
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	2.75
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	2.75
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	1.83
COG0124	Histidyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.92
COG0188	DNA gyrase/topoisomerase IV, subunit A	Replication, recombination and repair [L]	0.92
COG0290	Translation initiation factor IF-3	Translation, ribosomal structure and biogenesis [J]	0.92
COG0423	Glycyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.92
COG0441	Threonyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.92
COG0442	Prolyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.92
COG0557	Exoribonuclease R	Transcription [K]	0.92
COG1547	Predicted metal-dependent hydrolase	Function unknown [S]	0.92
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.92
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.92
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.92
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.92
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.92
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.92
COG4776	Exoribonuclease II	Transcription [K]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.07 %
Unclassified	root	N/A	11.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.07 %
Unclassified	root	N/A	11.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.16 %
Unclassified	root	N/A	11.93 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	65.14 %
Unclassified	root	N/A	11.93 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.92 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	37.61 %
Unclassified	root	N/A	11.93 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.50 %
bacterium F11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium F11	0.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.92 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.70 %
Unclassified	root	N/A	11.93 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.50 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.92 %
bacterium F11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium F11	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.70 %
Unclassified	root	N/A	11.93 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.59 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.92 %
Haloferacales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales	0.92 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.92 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.92 %
bacterium F11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium F11	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.70 %
Unclassified	root	N/A	11.93 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	1.83 %
Haloferacaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae	0.92 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.92 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.92 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.92 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.92 %
bacterium F11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium F11	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.70 %
Unclassified	root	N/A	11.93 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.83 %
Haloferax	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Haloferax	0.92 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.92 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.92 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.92 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.92 %
bacterium F11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium F11	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.70 %
Unclassified	root	N/A	11.93 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.83 %
Haloferax sulfurifontis	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Haloferax → Haloferax sulfurifontis	0.92 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.92 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.92 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.92 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.92 %
bacterium F11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium F11	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001154\|JGI12636J13339_1004691	All Organisms → cellular organisms → Bacteria	2240	Open in IMG/M
3300004114\|Ga0062593_100586271	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300004153\|Ga0063455_101101069	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300004635\|Ga0062388_101740027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300005186\|Ga0066676_10845829	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Haloferax → Haloferax sulfurifontis	617	Open in IMG/M
3300005436\|Ga0070713_100047451	All Organisms → cellular organisms → Bacteria → Acidobacteria	3530	Open in IMG/M
3300005468\|Ga0070707_101504256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300005526\|Ga0073909_10519658	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300005534\|Ga0070735_10291024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300005537\|Ga0070730_10704434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300005538\|Ga0070731_10272009	Not Available	1125	Open in IMG/M
3300005541\|Ga0070733_10258623	All Organisms → cellular organisms → Bacteria → Acidobacteria	1146	Open in IMG/M
3300005598\|Ga0066706_11020758	Not Available	636	Open in IMG/M
3300005610\|Ga0070763_10550394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300005610\|Ga0070763_10867483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300005712\|Ga0070764_10056104	All Organisms → cellular organisms → Bacteria	2030	Open in IMG/M
3300005712\|Ga0070764_10255695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999	Open in IMG/M
3300005938\|Ga0066795_10021713	All Organisms → cellular organisms → Bacteria → Acidobacteria	1831	Open in IMG/M
3300006028\|Ga0070717_10512502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1085	Open in IMG/M
3300006046\|Ga0066652_101649294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300006052\|Ga0075029_100104566	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300006176\|Ga0070765_100271747	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300006176\|Ga0070765_100589971	All Organisms → cellular organisms → Bacteria → Acidobacteria	1047	Open in IMG/M
3300006854\|Ga0075425_100157474	All Organisms → cellular organisms → Bacteria	2604	Open in IMG/M
3300009012\|Ga0066710_104187857	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300009137\|Ga0066709_100725500	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300009137\|Ga0066709_104344677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300009143\|Ga0099792_10054688	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300009143\|Ga0099792_11250661	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300009700\|Ga0116217_10795752	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium F11	582	Open in IMG/M
3300010326\|Ga0134065_10204385	All Organisms → cellular organisms → Bacteria → Acidobacteria	717	Open in IMG/M
3300010339\|Ga0074046_10685003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300012209\|Ga0137379_10537532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1076	Open in IMG/M
3300012210\|Ga0137378_10776674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300012350\|Ga0137372_10016516	All Organisms → cellular organisms → Bacteria	6986	Open in IMG/M
3300012351\|Ga0137386_10529765	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300012362\|Ga0137361_11866397	Not Available	518	Open in IMG/M
3300012929\|Ga0137404_10159949	All Organisms → cellular organisms → Bacteria → Acidobacteria	1881	Open in IMG/M
3300012958\|Ga0164299_10223505	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300012976\|Ga0134076_10289557	Not Available	707	Open in IMG/M
3300014968\|Ga0157379_12365276	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300015193\|Ga0167668_1050152	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300015374\|Ga0132255_100339730	All Organisms → cellular organisms → Bacteria → Acidobacteria	2171	Open in IMG/M
3300017943\|Ga0187819_10211328	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300017975\|Ga0187782_10747167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300018088\|Ga0187771_11332077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300018090\|Ga0187770_11783556	Not Available	504	Open in IMG/M
3300018482\|Ga0066669_10020031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3714	Open in IMG/M
3300020580\|Ga0210403_11102395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300020583\|Ga0210401_11108206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300021170\|Ga0210400_11037127	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300021171\|Ga0210405_10978804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300021180\|Ga0210396_10492441	All Organisms → cellular organisms → Bacteria → Acidobacteria	1073	Open in IMG/M
3300021401\|Ga0210393_10175057	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300021402\|Ga0210385_11523250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300021405\|Ga0210387_10704106	All Organisms → cellular organisms → Bacteria → Acidobacteria	895	Open in IMG/M
3300021406\|Ga0210386_11058381	Not Available	690	Open in IMG/M
3300021406\|Ga0210386_11069170	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300021420\|Ga0210394_10067854	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3093	Open in IMG/M
3300021420\|Ga0210394_11732779	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300021432\|Ga0210384_10652595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300021432\|Ga0210384_10886141	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	792	Open in IMG/M
3300021433\|Ga0210391_11419365	Not Available	533	Open in IMG/M
3300021477\|Ga0210398_10230997	All Organisms → cellular organisms → Bacteria → Acidobacteria	1508	Open in IMG/M
3300021479\|Ga0210410_10280528	All Organisms → cellular organisms → Bacteria → Acidobacteria	1495	Open in IMG/M
3300021479\|Ga0210410_11024271	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	715	Open in IMG/M
3300021559\|Ga0210409_10824397	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	801	Open in IMG/M
3300021858\|Ga0213852_1212084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300021861\|Ga0213853_11121426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850	Open in IMG/M
3300025916\|Ga0207663_10422081	All Organisms → cellular organisms → Bacteria → Acidobacteria	1024	Open in IMG/M
3300026078\|Ga0207702_12462468	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300026313\|Ga0209761_1298439	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300026342\|Ga0209057_1036248	All Organisms → cellular organisms → Bacteria	2513	Open in IMG/M
3300026356\|Ga0257150_1053848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300027432\|Ga0209421_1095557	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300027660\|Ga0209736_1045628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1259	Open in IMG/M
3300027795\|Ga0209139_10367749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300027826\|Ga0209060_10259614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300027842\|Ga0209580_10506874	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300027862\|Ga0209701_10437924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300027867\|Ga0209167_10269472	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300027882\|Ga0209590_10466386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300027882\|Ga0209590_10870163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300027882\|Ga0209590_11037636	Not Available	510	Open in IMG/M
3300027986\|Ga0209168_10160005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1139	Open in IMG/M
3300028010\|Ga0265358_102297	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300028015\|Ga0265353_1011826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	801	Open in IMG/M
3300028016\|Ga0265354_1003342	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1807	Open in IMG/M
3300028652\|Ga0302166_10073285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300028828\|Ga0307312_10829996	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300028906\|Ga0308309_10353955	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300028906\|Ga0308309_10521761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300030706\|Ga0310039_10037736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2195	Open in IMG/M
3300031446\|Ga0170820_15506849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300031708\|Ga0310686_101225214	All Organisms → cellular organisms → Bacteria	3859	Open in IMG/M
3300031715\|Ga0307476_10976415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300031718\|Ga0307474_10703069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300032770\|Ga0335085_12350949	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300032782\|Ga0335082_10616953	Not Available	946	Open in IMG/M
3300032783\|Ga0335079_10693169	Not Available	1065	Open in IMG/M
3300032783\|Ga0335079_12076394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300032805\|Ga0335078_10443666	All Organisms → cellular organisms → Bacteria → Acidobacteria	1688	Open in IMG/M
3300032892\|Ga0335081_10276234	Not Available	2244	Open in IMG/M
3300032892\|Ga0335081_10803914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	1123	Open in IMG/M
3300032892\|Ga0335081_12087534	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300033158\|Ga0335077_10162056	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2553	Open in IMG/M
3300033158\|Ga0335077_10750344	Not Available	999	Open in IMG/M
3300033826\|Ga0334847_036429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.50%
Host-Associated	Host-Associated	5.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.99%
Aquatic	Environmental → Aquatic	5.50%
Plants	Host-Associated → Plants	5.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.16%
Freshwater	Environmental → Aquatic → Freshwater	4.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.67%
Peat	Environmental → Terrestrial → Peat	1.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.83%
Sediment	Environmental → Aquatic → Sediment	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.72%
Loam	Environmental → Terrestrial → Soil → Loam	14.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.76%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.75%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.10%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.67%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.17%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	8.26%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.75%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.83%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.92%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.92%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.92%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.92%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028010	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA6	Host-Associated	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028652	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_3	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033826	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089202

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12636J13339_10046911	3300001154	Forest Soil	MKNHGMKIKHSKLRGEWAEMCFMIRAAEHGLSVTKPWSELSRYDFVVEYK
Ga0062593_1005862712	3300004114	Soil	MKIKHAKRRGEWAELCFMARAAEHGLCISKPWGETAHYDFVVETG
Ga0063455_1011010691	3300004153	Soil	MNEKAMEIKHPKRRGEWAEMRFMAAAAEHGLSVMKPWGETAQY
Ga0062388_1017400272	3300004635	Bog Forest Soil	MTNQGIDIAHAKLRGEWAELRFMSRAAEHGLTITKPWGDSAR
Ga0066676_108458291	3300005186	Soil	LISPGMSIRHPKARGEWAELRFMLRATELGLRVTKPWGDNSPYDL
Ga0070713_1000474511	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MMSPGMLIRHPKARGEWAELRFMTRATELGLRVTKPWGDN
Ga0070707_1015042562	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTNKGIDIKHPKLRGEWAELRFMARAAEHGLCVTKPWGDTARYDFA
Ga0073909_105196583	3300005526	Surface Soil	MKNLGMYIRHPKARGEWAELRFMTRATELGFIVTKPWGDSAP
Ga0070735_102910241	3300005534	Surface Soil	MTIDGLNIKHPKIRGEWAELRFMARAAEQGFAVNKPWGES
Ga0070730_107044342	3300005537	Surface Soil	MSIRHAKARGEWAELRFMERATELGLRVTKPWGDNAPYDFAV
Ga0070731_102720092	3300005538	Surface Soil	LKNEGMKIKHPKLRGEWAELRFMTRAAERGLRVSK
Ga0070733_102586231	3300005541	Surface Soil	MTNQGIDIQHPKLRGEWAELRFMARAAEHGLCIAKPWGDMARYDFAVEHN
Ga0066706_110207582	3300005598	Soil	MTKKNGINPKHSKLRGELAELRFMTRAAELGLRVIKPWGDS
Ga0070763_105503942	3300005610	Soil	MTNQGIDIQHPKLRGEWAELRFMARAAEHGLCIAKPWGDMARYDFAVEHNG
Ga0070763_108674831	3300005610	Soil	VRKTTGEKIKHHKLRGEWAELRFMAMAAEHGLQVTKPWGEMA
Ga0070764_100561041	3300005712	Soil	MKNDGMKIKHAKLRGEWAEMCFMTRAAEHGLSVTRPWGEMSRYDFAVEYK
Ga0070764_102556951	3300005712	Soil	MTNQGIDIQHPKLRGEWAELRFMARAAEHGLCIAKPWGDMARYDFAV
Ga0066795_100217133	3300005938	Soil	MKIRLPKERGEWAELRFMTKATEHGFKLTKPWEEV*
Ga0070717_105125021	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MMSPGMLIRHPKARGEWAELRFMTRATELGLRVTKPWGDNAPYD
Ga0066652_1016492941	3300006046	Soil	MNELAMQIKQPKRRGEWVELRFMAAAAENGLHVTKPWG
Ga0075029_1001045661	3300006052	Watersheds	MKNPGMYIRHPKARGEWAELRFMTRATELGLIVTKPWGD
Ga0070765_1002717474	3300006176	Soil	VRKTTGEKIKHHKRRGEWAELRFMAMAAEHGLQVTKPWGEMAR
Ga0070765_1005899713	3300006176	Soil	MKNDGMKIKHPKRRGEWAELRFMTRAAEQGLCVTKPWGETARYDF
Ga0075425_1001574741	3300006854	Populus Rhizosphere	MKNKGMKIKHPKLRGEWAELRFMTRAAEHGLCVTKP
Ga0066710_1041878571	3300009012	Grasslands Soil	MKIKHPKLRGEWAELRFMSCAAEHGLCVTKPWGETARYDFAVEH
Ga0066709_1007255001	3300009137	Grasslands Soil	MKNKGMKIKHPKLRGEWAELRFMTCAAEHGLCVTKPWGETAHYDFAVENQG
Ga0066709_1043446772	3300009137	Grasslands Soil	MTNEGRDIKNHKKRGEWAELQFMARAAEHGLNVARPWGDSQRYDVGIEY
Ga0099792_100546884	3300009143	Vadose Zone Soil	MPNRGIDIQQSKARGEWAELRFMARTAEHGLYITKPWGDSAPYDFAVDHNG
Ga0099792_112506611	3300009143	Vadose Zone Soil	MPNRGIDIQQAKARGEWAELRFMARTAEHGLYITKPWGDSAPYDFAVDHNG
Ga0116217_107957522	3300009700	Peatlands Soil	MKNPGMYIRHPKARGEWAELRFMTRATELDFIVAKPWGDMA
Ga0134065_102043851	3300010326	Grasslands Soil	MNELAMQIKQPKRRGEWVELRFMAAAAENGLHVTKPWGDSAQ
Ga0074046_106850031	3300010339	Bog Forest Soil	MTISRTTLRHAKARGEWAELRFMTRAAEQGVRVTKPWGDNSPYDFAV
Ga0137388_109496091	3300012189	Vadose Zone Soil	MKKRRSHIKKPKQRGEWAELRFMMLAAERGLSVAKPWG
Ga0137379_105375322	3300012209	Vadose Zone Soil	MNELAMKIKQPKRRGEWVELRFMAAAAENDLHVTKPWGDSAQYDFILEY
Ga0137378_107766741	3300012210	Vadose Zone Soil	MTNEGRDIKNHKKRGEWAELQFMARAAEHGLNVARPWGDSQRYDVGIEYK
Ga0137372_1001651613	3300012350	Vadose Zone Soil	MTNFGAKIKHPKLRGEWAKLCFMVQAAEHGLQVG*
Ga0137386_105297652	3300012351	Vadose Zone Soil	LKIRDPKQRGEWAELRFMAKAMEHGYRLTRPWGGYLPYDV
Ga0137361_118663971	3300012362	Vadose Zone Soil	MTKKSGINPKHSKLRGEVAELRFMTRAAELGLRVIKPWGD
Ga0137404_101599493	3300012929	Vadose Zone Soil	MNNEGMNIRHAKSRGEWAELRFMTRATALGFRVTKPWGD
Ga0164299_102235052	3300012958	Soil	MGNPGMKIKHAKRRGEWAELCFMARAAEHGLCISKPWGETAHYDFVV
Ga0134076_102895571	3300012976	Grasslands Soil	MTKKNGINPKHSKLRGELAELRFMTRAAELGLRVI
Ga0157379_123652761	3300014968	Switchgrass Rhizosphere	MANQGIDIQHPMLRGEWAELCFMVKAAEHGLFVTKPWGDMAPYDFAVEYR
Ga0167668_10501521	3300015193	Glacier Forefield Soil	VEIYKKEIMKNYGMKIKHPKRRGEWAELRFMARAAEEGLQVSK
Ga0132255_1003397304	3300015374	Arabidopsis Rhizosphere	MLIRHPKARGEWAELRFMTRATELGLRVTKPWGDN
Ga0187819_102113282	3300017943	Freshwater Sediment	MTNRGIDIKHPKQRGEWAELRFMTRAAEHGLSITKPWGEMTHYDF
Ga0187782_107471671	3300017975	Tropical Peatland	MKNNGMKIKHPKLRGEWAELCFMTRAAEHGLCVTKPW
Ga0187771_113320771	3300018088	Tropical Peatland	MQNPGTTIPHAKARGEWAELRFMARAAELGLRVTKPW
Ga0187770_117835561	3300018090	Tropical Peatland	MNHVPSPGGQRILNPKLRGEWAELRFLQTAIERGFRVTKPWGE
Ga0066669_100200314	3300018482	Grasslands Soil	MNELAMQIKQPKRRGEWVELRFMAAAAENGLHVTKPWGDSAQI
Ga0210403_111023951	3300020580	Soil	MTNQGIDIQHPKLRGEWAELRFMARAAEHGLCIAKPWG
Ga0210401_111082061	3300020583	Soil	MTNKGIDIKPAKERGEWAELRFMARAAEEGLVVTKPWGESSRYDF
Ga0210400_110371272	3300021170	Soil	MFCPGMSIRYPKQRGEWAELLFMARATEHGLVVAKPWGESSHYDF
Ga0210405_109788042	3300021171	Soil	MTIDGTSIKHCKMRGEWAELRFMARAAEHGLCVSKPWGDSARYDFAVEYGG
Ga0210396_104924411	3300021180	Soil	MKNNGMKIKHPKLRGEWAEMCFMARAAEHGLCVTRPWGEMSRYDFAVE
Ga0210393_101750571	3300021401	Soil	MNLHHAKTRGEWAELRFMTRATELGLRVIKPWGDNSAYDL
Ga0210385_115232502	3300021402	Soil	MTNRGIDIKHPKQRGEWAELRFMARAAEHGLCITKPWGEMAHYDFCH
Ga0210387_107041061	3300021405	Soil	MTDNGSNIHHPKARGEWAELRFMARASERGLYVAKPWGDTAPYDLAV
Ga0210386_110583811	3300021406	Soil	MKNNGMKIKHPKLRGEWAEMCFMARAAEHGLCVTRPWGEM
Ga0210386_110691702	3300021406	Soil	MTNQGIDIQHPKLRGEWAELRFMARAAEHGLCIAKPWGDMARYDF
Ga0210394_100678541	3300021420	Soil	VRKTTGEKIKHHKLRGEWAELRFMAMAAEHGLQVTKPWGEMAR
Ga0210394_117327791	3300021420	Soil	MECPGMNIKHPKQRGEWAEMRFMARAAEHGLVVTKPWGESTHYDFAV
Ga0210384_106525951	3300021432	Soil	MKITGASIKAPKQRGEWAELRFMARASEHGLSISKPWGDS
Ga0210384_108861412	3300021432	Soil	MKITGASIKEPKQRGEWAELRFMARASEHGLSISKPWGDS
Ga0210391_114193652	3300021433	Soil	MKNNGMKIKHPKLRGEWAEMCFMTRAAEHGLCVTRPW
Ga0210398_102309971	3300021477	Soil	MTNQGIDIQHPKLRGEWAELRFMARAAEHGLCIAKPWGDMARYDFA
Ga0210410_102805283	3300021479	Soil	MKNNGMKIKHPKLRGEWAEMCFMTRAAEHGLCVTRPWGEMSRYDFAVEYKG
Ga0210410_110242712	3300021479	Soil	MTSRGADIKNHKMRGEWAELRFMARAAEFGLRVTKPWGDSAHYDFAVEHKG
Ga0210409_108243971	3300021559	Soil	MTNRGVDIKNRKQRGEWAEMCFMARAAAHGLCVAKPYGDS
Ga0213852_12120841	3300021858	Watersheds	MPNPSCPIRHAKARGEWAELRFMTRAAELGLRVTKPWGDNAPYDLAV
Ga0213853_111214261	3300021861	Watersheds	MQNPSCPIRHAKARGEWAELRFMTRAAELGLRVTKPWGDNAPYDLAV
Ga0207663_104220811	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTSPGMLIRHPKARGEWAELRFMTRATELGLRVTKPWG
Ga0207702_124624681	3300026078	Corn Rhizosphere	MKIKHAKRRGEWAELCFMARAAEHGLCISKPWGETAHYD
Ga0209761_12984392	3300026313	Grasslands Soil	MTKKSGINPKHSKLRGEVAELRFMTRAAELGLRVIKPWGDSARYDF
Ga0209057_10362484	3300026342	Soil	MTKKNGINPKHSKLRGELAELRFMTRAAELGLRVIKPWGDSAR
Ga0257150_10538481	3300026356	Soil	MPKGKYIQHPKLRGEWAELRFMQRATEHGFRVTKPWGE
Ga0209421_10955571	3300027432	Forest Soil	MSLHQVNIENSKQRGEWAELLFMARAAEQGLAIARPW
Ga0209736_10456281	3300027660	Forest Soil	MNQGIDIQHHKLRGEWAELRFMARATEHGLSIAKPWGE
Ga0209139_103677491	3300027795	Bog Forest Soil	MTNKGIDIQHPKLRGEWAELRFMARAAEHGLCIAKPWGDMAR
Ga0209060_102596141	3300027826	Surface Soil	LKNKGMKIKHPKLRGEWAELRFMTRAAEHGLRVSKPWGETAHYD
Ga0209580_105068742	3300027842	Surface Soil	MNDLGMSIKHAKRRGEWAELRFMACAAERGLCVSKPWGDTSHYDFV
Ga0209701_104379243	3300027862	Vadose Zone Soil	MPNRGIDIQQAKARGEWAELRFMARTAEHGLYITKPWGDSA
Ga0209167_102694722	3300027867	Surface Soil	MTNRGIDIKHPKQRGEWAELIFMARAAEHGLCITKPWGEMAHYDFAIEHHGHF
Ga0209590_104663861	3300027882	Vadose Zone Soil	MAKKGINIKHSKLRGEVAELRFMARAADQGLRVIKPWGDSS
Ga0209590_108701631	3300027882	Vadose Zone Soil	MKNKGMKIKHPKLRGEWAELRFMTCAAEHGLCVTKPWGE
Ga0209590_110376362	3300027882	Vadose Zone Soil	MTNEGRDIKNHKKRGEWAELQFMARAAEHGLNVARP
Ga0209168_101600051	3300027986	Surface Soil	LKNEGMKIKHPKLRGEWAELRFMTRAAEHGLRVSKPWGETAHYDFAVEHEGH
Ga0265358_1022972	3300028010	Rhizosphere	MKNRGIDIKHPKQRGEWAELRFMARAAEHGLCITKPW
Ga0265353_10118262	3300028015	Soil	MKNRGIDIKHPKQRGEWAELRFMARAAEHGLCITKPWGEMSH
Ga0265354_10033425	3300028016	Rhizosphere	MINKGSQIKNSKLRGEWAELRFLTRAVEHGLMVSKPWGDSA
Ga0302166_100732851	3300028652	Fen	MRIRKPKERGEWAELRFMAKAAELGFKLSKPWGDSAPYDVAIEHR
Ga0307312_108299962	3300028828	Soil	MKNKGNNIKHAKQRGEWAEMRFMARAAERGLQVSKPWGESASYDF
Ga0308309_103539551	3300028906	Soil	VRKTTGEKIKHHKRRGEWAELRFMAMAAEHGLQVTKPWGEMARYDFAVEY
Ga0308309_105217613	3300028906	Soil	MLIRHAKARGEWAELRFMTRATELGFRVTKPWGDCAPY
Ga0310039_100377361	3300030706	Peatlands Soil	MTNSINIPHAKARGEWAELRFMARAAELGLRVTKPWGDNAPY
Ga0170820_155068491	3300031446	Forest Soil	MKNPGINIPHAKARGEWAELRFMTRATELGFRVTKPW
Ga0310686_1012252144	3300031708	Soil	MTNRGIDIKHPKQRGEWAELRFMTRAAEHGLSITKP
Ga0307476_109764151	3300031715	Hardwood Forest Soil	MTNRGIDIKHPKQRGEWAELIFMARAAEHGLCITKPWG
Ga0307474_107030691	3300031718	Hardwood Forest Soil	MKNNGMKIKHPKLRGEWAEMCFMTRAAEHGFSVTRPWGEMSRYDFA
Ga0335085_123509491	3300032770	Soil	MENRGMRIKHPKLRGEWAELRFMARAAEQGLQVTKPWGE
Ga0335082_106169533	3300032782	Soil	MANPGLNIKLPKARGEWAELRFMARAAEQGLTVTKPW
Ga0335079_106931692	3300032783	Soil	VRKTTGEKIKHHKLRGEWAELRFMAMAAEHGLQVT
Ga0335079_120763941	3300032783	Soil	MQIPGMHIRLAKARGEWAELRFMQRALELGFIVTKPWGD
Ga0335078_104436661	3300032805	Soil	MASEERFIQLPKARGEWAELRFMARAAEHGLTVSKRWGESKHYDFVVEYDR
Ga0335081_102762342	3300032892	Soil	LSGEEDWVRKTTGEKIKHHKLRGEWAELRFMAMAAEHG
Ga0335081_108039142	3300032892	Soil	MYIRHPKARGEWAELCFMIRATVLGFIVAKPWGDMAPFDLI
Ga0335081_120875342	3300032892	Soil	MKNAGMKIKHPKLRGEWAELRFMTRAAEHGLCVTKPWGETAKYDFAVEYDGHF
Ga0335077_101620563	3300033158	Soil	MKNAGMKIKHPKLRGEWAELRFMTRAAEHGLCVTKPWGE
Ga0335077_107503441	3300033158	Soil	VRKTTGEKIKHHKLRGEWAELRFMAMAAEHGLQVTKP
Ga0334847_036429_407_559	3300033826	Soil	MTNTGSEIQHTKKRGEWAELRFMARAAEYGLCVAKPWGDSSEYDVAVEYEG

Hidden Markov Model


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