Metagenome / Metatranscriptome Family F089221

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089221
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	98 residues
Representative Sequence	MFLRHPSDRPSVVVDPAAFGVVAPQDGSFVGRAGPLGRERVMSALPLDPGPALLSPPTVVRDPGSAFLADPDGNLIGEAAVWVGRMLTARWTEDTRRF
Number of Associated Samples	50
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	15.60 %
% of genes near scaffold ends (potentially truncated)	23.85 %
% of genes from short scaffolds (< 2000 bps)	54.13 %
Associated GOLD sequencing projects	45
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.890 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.284 % of family members)
Environment Ontology (ENVO)	Unclassified (72.477 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (93.578 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.38% β-sheet: 20.63% Coil/Unstructured: 76.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF05272	VirE	13.76
PF13884	Peptidase_S74	9.17
PF00196	GerE	3.67
PF13481	AAA_25	2.75
PF08291	Peptidase_M15_3	1.83
PF04404	ERF	1.83
PF06067	DUF932	1.83
PF08706	D5_N	0.92
PF11752	DUF3309	0.92
PF01391	Collagen	0.92
PF00182	Glyco_hydro_19	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG5545	Predicted P-loop ATPase and inactivated derivatives	Mobilome: prophages, transposons [X]	13.76
COG3179	Chitinase, GH19 family	Carbohydrate transport and metabolism [G]	0.92
COG3979	Chitodextrinase	Carbohydrate transport and metabolism [G]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.89 %
All Organisms	root	All Organisms	32.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.89 %
cellular organisms	root	All Organisms → cellular organisms	22.02 %
Viruses	superkingdom	All Organisms → Viruses	10.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.89 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	22.02 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	10.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.84 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	10.09 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.89 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	10.09 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.17 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.89 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	10.09 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.50 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.89 %
Mieseafarmvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Mieseafarmvirus	5.50 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	2.75 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.83 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.92 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.89 %
Mieseafarmvirus RSL1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Mieseafarmvirus → Mieseafarmvirus RSL1	5.50 %
Ralstonia phage RsoM2USA	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Ralstonia phage RsoM2USA	2.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.83 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.92 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.89 %
Mieseafarmvirus RSL1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Mieseafarmvirus → Mieseafarmvirus RSL1	5.50 %
Ralstonia phage RsoM2USA	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Ralstonia phage RsoM2USA	2.75 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.83 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.92 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.89 %
Mieseafarmvirus RSL1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Mieseafarmvirus → Mieseafarmvirus RSL1	5.50 %
Ralstonia phage RsoM2USA	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Ralstonia phage RsoM2USA	2.75 %
Bradyrhizobium sp. Leo170	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo170	1.83 %
Sinorhizobium meliloti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	0.92 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100028716	Not Available	4896	Open in IMG/M
3300003505\|JGIcombinedJ51221_10017518	Not Available	2466	Open in IMG/M
3300003505\|JGIcombinedJ51221_10047179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1625	Open in IMG/M
3300003505\|JGIcombinedJ51221_10090850	Not Available	1207	Open in IMG/M
3300003505\|JGIcombinedJ51221_10094162	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300004629\|Ga0008092_10814868	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005591\|Ga0070761_10029640	Not Available	3053	Open in IMG/M
3300005602\|Ga0070762_10002197	Not Available	9161	Open in IMG/M
3300005602\|Ga0070762_10004155	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Mieseafarmvirus → Mieseafarmvirus RSL1	6966	Open in IMG/M
3300005602\|Ga0070762_10060500	Not Available	2109	Open in IMG/M
3300005602\|Ga0070762_10449592	Not Available	838	Open in IMG/M
3300005610\|Ga0070763_10001618	All Organisms → cellular organisms → Bacteria	7597	Open in IMG/M
3300005610\|Ga0070763_10005387	All Organisms → cellular organisms → Bacteria → Proteobacteria	4932	Open in IMG/M
3300005610\|Ga0070763_10025192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2671	Open in IMG/M
3300005610\|Ga0070763_10378124	Not Available	792	Open in IMG/M
3300005712\|Ga0070764_10080392	All Organisms → cellular organisms → Bacteria → Proteobacteria	1714	Open in IMG/M
3300005921\|Ga0070766_10040715	All Organisms → cellular organisms → Bacteria	2575	Open in IMG/M
3300006176\|Ga0070765_100004442	Not Available	9146	Open in IMG/M
3300006176\|Ga0070765_100008005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7195	Open in IMG/M
3300006176\|Ga0070765_100013136	All Organisms → cellular organisms → Bacteria → Proteobacteria	5915	Open in IMG/M
3300006176\|Ga0070765_100691246	Not Available	963	Open in IMG/M
3300006176\|Ga0070765_100790881	Not Available	896	Open in IMG/M
3300006176\|Ga0070765_102072565	Not Available	532	Open in IMG/M
3300010379\|Ga0136449_103044797	Not Available	653	Open in IMG/M
3300020579\|Ga0210407_10001888	Not Available	18776	Open in IMG/M
3300020579\|Ga0210407_10049548	All Organisms → cellular organisms → Bacteria	3135	Open in IMG/M
3300020580\|Ga0210403_10011999	Not Available	7019	Open in IMG/M
3300020581\|Ga0210399_10394785	Not Available	1154	Open in IMG/M
3300020581\|Ga0210399_11154165	Not Available	617	Open in IMG/M
3300020582\|Ga0210395_10155984	Not Available	1705	Open in IMG/M
3300020582\|Ga0210395_10550926	Not Available	867	Open in IMG/M
3300020583\|Ga0210401_10010765	All Organisms → cellular organisms → Bacteria	8941	Open in IMG/M
3300021168\|Ga0210406_10007777	Not Available	10825	Open in IMG/M
3300021170\|Ga0210400_10119386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo170	2103	Open in IMG/M
3300021171\|Ga0210405_10011409	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7475	Open in IMG/M
3300021180\|Ga0210396_10941306	Not Available	734	Open in IMG/M
3300021180\|Ga0210396_11116507	Not Available	663	Open in IMG/M
3300021180\|Ga0210396_11692694	Not Available	514	Open in IMG/M
3300021181\|Ga0210388_10308398	Not Available	1390	Open in IMG/M
3300021181\|Ga0210388_10771107	Not Available	835	Open in IMG/M
3300021401\|Ga0210393_10057932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo170	3049	Open in IMG/M
3300021401\|Ga0210393_10087732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2469	Open in IMG/M
3300021401\|Ga0210393_10427614	Not Available	1080	Open in IMG/M
3300021401\|Ga0210393_11129091	Not Available	632	Open in IMG/M
3300021401\|Ga0210393_11330977	Not Available	575	Open in IMG/M
3300021403\|Ga0210397_10116540	Not Available	1826	Open in IMG/M
3300021403\|Ga0210397_10210762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1393	Open in IMG/M
3300021403\|Ga0210397_10806966	Not Available	724	Open in IMG/M
3300021403\|Ga0210397_11100100	Not Available	617	Open in IMG/M
3300021403\|Ga0210397_11279794	Not Available	570	Open in IMG/M
3300021404\|Ga0210389_10357617	Not Available	1147	Open in IMG/M
3300021405\|Ga0210387_10007723	All Organisms → cellular organisms → Bacteria	8233	Open in IMG/M
3300021406\|Ga0210386_10024683	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4697	Open in IMG/M
3300021406\|Ga0210386_10076727	Not Available	2700	Open in IMG/M
3300021406\|Ga0210386_10080945	Not Available	2631	Open in IMG/M
3300021406\|Ga0210386_10105105	Not Available	2320	Open in IMG/M
3300021406\|Ga0210386_10720648	Not Available	859	Open in IMG/M
3300021406\|Ga0210386_10892201	Not Available	761	Open in IMG/M
3300021406\|Ga0210386_11200659	Not Available	641	Open in IMG/M
3300021433\|Ga0210391_10563795	Not Available	894	Open in IMG/M
3300021433\|Ga0210391_10788643	Not Available	743	Open in IMG/M
3300021475\|Ga0210392_10007185	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Mieseafarmvirus → Mieseafarmvirus RSL1	5814	Open in IMG/M
3300021475\|Ga0210392_10035241	Not Available	2979	Open in IMG/M
3300021475\|Ga0210392_10696745	Not Available	756	Open in IMG/M
3300021477\|Ga0210398_10135137	Not Available	2005	Open in IMG/M
3300021477\|Ga0210398_10791125	Not Available	764	Open in IMG/M
3300021479\|Ga0210410_10304444	Not Available	1430	Open in IMG/M
3300021559\|Ga0210409_10778491	Not Available	829	Open in IMG/M
3300022724\|Ga0242665_10352129	Not Available	527	Open in IMG/M
3300027029\|Ga0208731_1007091	Not Available	1108	Open in IMG/M
3300027029\|Ga0208731_1009433	Not Available	989	Open in IMG/M
3300027064\|Ga0208724_1027437	Not Available	579	Open in IMG/M
3300027064\|Ga0208724_1035810	Not Available	513	Open in IMG/M
3300027066\|Ga0208236_1000758	Not Available	1382	Open in IMG/M
3300027069\|Ga0208859_1004213	All Organisms → cellular organisms → Bacteria	1519	Open in IMG/M
3300027069\|Ga0208859_1004504	Not Available	1477	Open in IMG/M
3300027069\|Ga0208859_1043945	Not Available	522	Open in IMG/M
3300027096\|Ga0208099_1032057	Not Available	752	Open in IMG/M
3300027109\|Ga0208603_1043138	Not Available	693	Open in IMG/M
3300027117\|Ga0209732_1002495	Not Available	2966	Open in IMG/M
3300027165\|Ga0208608_100395	Not Available	1722	Open in IMG/M
3300027168\|Ga0208239_1000195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2789	Open in IMG/M
3300027168\|Ga0208239_1006923	Not Available	980	Open in IMG/M
3300027795\|Ga0209139_10100504	Not Available	1018	Open in IMG/M
3300027855\|Ga0209693_10008006	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Mieseafarmvirus → Mieseafarmvirus RSL1	4890	Open in IMG/M
3300027855\|Ga0209693_10099650	Not Available	1438	Open in IMG/M
3300027879\|Ga0209169_10028004	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Mieseafarmvirus → Mieseafarmvirus RSL1	3003	Open in IMG/M
3300027884\|Ga0209275_10000882	Not Available	12142	Open in IMG/M
3300027884\|Ga0209275_10002310	Not Available	7893	Open in IMG/M
3300027884\|Ga0209275_10005882	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Ralstonia phage RsoM2USA	5110	Open in IMG/M
3300027884\|Ga0209275_10032617	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Mieseafarmvirus → Mieseafarmvirus RSL1	2412	Open in IMG/M
3300027884\|Ga0209275_10222338	Not Available	1028	Open in IMG/M
3300027889\|Ga0209380_10006653	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Ralstonia phage RsoM2USA	6923	Open in IMG/M
3300028906\|Ga0308309_10001316	All Organisms → cellular organisms → Bacteria	14789	Open in IMG/M
3300028906\|Ga0308309_10003595	Not Available	9283	Open in IMG/M
3300028906\|Ga0308309_10003716	Not Available	9156	Open in IMG/M
3300028906\|Ga0308309_10004255	Not Available	8619	Open in IMG/M
3300028906\|Ga0308309_10005155	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Mieseafarmvirus → Mieseafarmvirus RSL1	7880	Open in IMG/M
3300028906\|Ga0308309_10684310	Not Available	891	Open in IMG/M
3300028906\|Ga0308309_10766245	Not Available	839	Open in IMG/M
3300028906\|Ga0308309_11569137	Not Available	561	Open in IMG/M
3300031708\|Ga0310686_116185299	Not Available	568	Open in IMG/M
3300031715\|Ga0307476_10002335	All Organisms → cellular organisms → Bacteria → Proteobacteria	11347	Open in IMG/M
3300031715\|Ga0307476_10081090	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Ralstonia phage RsoM2USA	2265	Open in IMG/M
3300031715\|Ga0307476_10086427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	2195	Open in IMG/M
3300031718\|Ga0307474_10047013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3183	Open in IMG/M
3300031718\|Ga0307474_10171653	Not Available	1643	Open in IMG/M
3300031823\|Ga0307478_10004014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10645	Open in IMG/M
3300031823\|Ga0307478_10016654	Not Available	5133	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.08%
Aquatic	Environmental → Aquatic	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.08%
Freshwater	Environmental → Aquatic → Freshwater	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.46%
Loam	Environmental → Terrestrial → Soil → Loam	48.62%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	48.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.92%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.28%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	31.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	17.43%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.42%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.92%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027029	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF045 (SPAdes)	Environmental	Open in IMG/M
3300027064	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF003 (SPAdes)	Environmental	Open in IMG/M
3300027066	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF005 (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027165	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF035 (SPAdes)	Environmental	Open in IMG/M
3300027168	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF037 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1000287165	3300002245	Forest Soil	MQHLRHPSPRPSVVVDPAAFGVVDPSPAFVGRPGPLGRERVMSALPLNPGPALLAPPHVVRDAGSSFLADPDGALIGEPAVWVNRMLTARWTEDTRRLG*
JGIcombinedJ51221_100175183	3300003505	Forest Soil	MLGNLSRKAGAPIAVENLRHPSLRPSVVVDPAAFGVVAPDSSFFGRPAPLGRERVLFALPLDPGPALVSPPTVVRDPGSSYLADPDGALIGVAATWVSRMQTARWVEDTRRLAG*
JGIcombinedJ51221_100471791	3300003505	Forest Soil	MFLRHPSDRPSVVVDPAAFGVVAPQDGSFVGRAGPLGRERVMSALPLDPGPALLSPPTVVRDPGSAFLADPDGNLIGEAAVWVGRMLTARW
JGIcombinedJ51221_100908502	3300003505	Forest Soil	MKHLRHPSPRPGVVLDPAGFAISDPTNSTILGPQGPFGRERVLSALPLEPGPMPFAPPVCVNDGVAFLADPDGNLIGMPGLWIPRMLKATYAADTRRLG*
JGIcombinedJ51221_100941621	3300003505	Forest Soil	MLLLPASRASGLNVEHLRHPSPRPSVVVDPAAFGVVDQTGGFVGRAGPLGRERVLFALPLDPGPALLSPPTVVHDPGAAYLADPEGGLIGEAAVWVERMLTARWTEDTRRF*
Ga0008092_108148681	3300004629	Tropical Rainforest Soil	VDPAAGALIDPANQGIGRQGPLGRERVLFALPLSPGPALLSPPTVVRDAGPALAVDPLETFIGRPAIWVSRMLTAVPTEDTRRL*
Ga0070761_100296403	3300005591	Soil	MKHLRNPSPRPGVVLDPAGFAIGDPTNSTILGPQGPFGRERILSALPLEPGPMPFAPPVCVNDGVAFLADPDGNLIGMPGLWIPRMLKATYAADTRRLG*
Ga0070762_100021977	3300005602	Soil	MEHLRHPSSRPAVVVDPAAFGVVDPTGGFLGRPNPLGRERVMSALPLDPGPALLSPPTVVHDNGPAFLADPDGALIGEPAVWVNRMLTARWVEDTRRF*
Ga0070762_100041553	3300005602	Soil	VVDPAAFGVVAPQDGSFVGRPGPLGRERVMSALPLDPGPALLSPPTVVRDPGSAFLADADGNLIGEGAVWVGRMLTARWTEDTRRF*
Ga0070762_100605002	3300005602	Soil	MFLRPPSDRPSVVVDPAAFGVGFPPPSGQVIGRPGPFGRERVMSALPLDPPPTLLSPPTVVRDAGSAYFADPDGALIGEPAVWVDRMLTARWAEDTRRF*
Ga0070762_104495922	3300005602	Soil	VVDPAAFGVVAPIGRPGPLGRERVMSALPLDPGPALLSPPTVVRDPGSAYLADPDGALIGEAAVWVGRMLTARWVEDTRRF*
Ga0070763_100016184	3300005610	Soil	MKHLRHPSPRPGVIVDPANFGIGDPATGTIVGPQGPFGRERVLSALPLDPGPSLLAPPTCVFDGVAFLADPDNNLIGAPAVWVGRMLTAQWTEDTRRF*
Ga0070763_100053874	3300005610	Soil	VVDPAAFGVVAPQDGSFVGRPRPLGRERVMSALPLDPGPALLSPPTVVRDPGAAFLADPDGNLIGEAAVWVGRMLTARWTEDTRRF*
Ga0070763_100251925	3300005610	Soil	VVDPAAFGVLDPLTPAIVGRPGPFGRERVMSALPLDPGPALLSPPTVVRDPGSAFLADPDGALIGDPAVWVGRMLTARWTEDTRRF*
Ga0070763_103781243	3300005610	Soil	MSFLRHPSPRPSVVVDPAAYGIVAPQDGSFVGRAGPLGRERVMSALPLDPGPALLSPPTVVRDPGSAYLADPDGALIGEAAVWVGRMLTARWTEDTRRLG*
Ga0070764_100803923	3300005712	Soil	VVDPAAFGVVDPSPAFVGRPGPLGRERVMSALPLNPGPALLAPPHVVRDAGSSFLADPDGALIGEPAVWVNRMLTARWTEDTRRLG*
Ga0070766_100407154	3300005921	Soil	VVDPAAFGVVAPQDGSFVGRAGPLGRERVMSALPLDPGPALLSPPTVVRDPGSAFLADPDGNLIGEAAVWVGRMLTARWTEDTRRL*
Ga0070765_1000044427	3300006176	Soil	MLCCPPHRAKDRAPIAVENLRHPSLSPSVVVDPAAFGVVAPDSAFVGRPAPLGRERVLFALPLDPGPALLSPPIVVRDPGSAYLADPDGALIGVAATWVSRMQTARWVEDTRRLAG*
Ga0070765_10000800510	3300006176	Soil	MEHLRDPSPRPSVVVDPAAFGVVAPADGSFVGLPGPLGRERVMSALPLDPGPALLSPPTVVRDASSAYLADPDGALIGEAAVWVNRMLTARWTEATRRF*
Ga0070765_1000131361	3300006176	Soil	MEHLRHPSDRPSVVVDPAAYGIGVGRPGPFGRERVMSALPLDPGPCLLSPPTVVRDPGAAYLADPDGALIGEAAVWVGRMLTARWTEDTRRF*
Ga0070765_1006912462	3300006176	Soil	MFLRHPSDRPSVVVDPAAYGVLDPLTPAIVGRPGPFGRERVMSALPLDPGPALLSPPTVVHDPGSAFLADPDGALIGEAAVWVNRMLTARWVEDTRRF*
Ga0070765_1007908813	3300006176	Soil	MFLRHPSDRPSVVVDPAAFGVLDPLTPAIVGRPGPFGRERVMSALPLDPGPALLSPPTVVRDPGSAFLADPDGALIGDPAVWVGRMLTARWTEDTRRF*
Ga0070765_1020725652	3300006176	Soil	MSFLRHPSPRPSIVVDPADFGVVAPQDGSFVGRSGPFGRERVMSALPLDPGPALLSPPTVVRDPGAAYLADPDGNLIGEAAVWVGRMLTARWTEDTRRF*
Ga0136449_1030447972	3300010379	Peatlands Soil	VVDPAAYGLVDPATGTSVGRPGPLGRERVMSALPLDPGPALLAPPTVLHDHGSNYLADPDGALIGEAALWVDRC*
Ga0210407_100018887	3300020579	Soil	MEHLRHPSARPSVVVDPADFGVGFPPGQVVGRPGPFGRERVMSALPLDPGPALLSPPTVVRDPGAAYLADPDGNLIGEAAVWVGRMLTARWTEDTRRF
Ga0210407_100495484	3300020579	Soil	MFLRHPSDRPAVVVDPAAFGVVDPSGGFVGRPGPFGRERVMSALPLDPGPCLLSPPTVVRDPGSSYLADPDNNLIGEPAVWVNRILTARWVEDTRRF
Ga0210403_1001199910	3300020580	Soil	MFLRHPSDRPSVVVDPAAYGVGFPPGQVVGRPGPLGRERVMSALPLDPGPALLSPPTVVRDPGSAFLADPDGNLIGEAAVWVGRMLTARWTEDTRRF
Ga0210399_103947853	3300020581	Soil	MLLLPASRASGLNVEHLRHPSPRPSVVVDPAAFGVVDQTGGFVGRAGPLGRERVLFALPLDPGPALLSPPTVVHDPGAAYLADPEGGLIGEAAVWVERMLTARWTEDTRRF
Ga0210399_111541651	3300020581	Soil	MLAISSRKDRAPIAVENLRHPSLRPSVVVDPAAFGVFAPDSSLLGRPGPFGRERCLFALPLEPGPALVSPPTVVHDPGSAYLADPDGNLIGVAATWVSRMLTARWTEDTRRLAG
Ga0210395_101559843	3300020582	Soil	ENLRHPSLRPSVVVDPAAFGIVAPDSSLVGCPAPLGRERVLFALPLEPGPSLLSPPTVLRDPGSAYVADPQGALIGTPAVWVSRMQTARWVEDTRRLAG
Ga0210395_105509262	3300020582	Soil	VVVDPAAFGVVAPDVSIVGRPGPFGRERVMSALPLDPGPCLLSPPTVVHDNGPAFLADPDGALIGEPAVWVGRMLTARWVEDTRRF
Ga0210401_100107653	3300020583	Soil	MKHLRNPSPRPGVVLDPAGFAIGDPTNSTILGPQGPFGRERILSALPLEPGPMPFAPPVCVNDGVAFLADPDGNLIGMPGLWIPRMLKATYAADTRRLG
Ga0210406_100077773	3300021168	Soil	MFLRHPSDRPSVVVDPAAYGVGFPPGGPLGRERVMSALPLDPGPALLSPPTVVRDPGSAFLADPDGNLIGEAAVWVGRMLTARWTEDTRRF
Ga0210400_101193861	3300021170	Soil	RSGLPSGFRGRDARRGLSRLMLLLPASRASGLNVEHLRHPSPRPSVVVDPAAFGVVDQTGGFVGRAGPLGRERVLFALPLDPGPALLSPPTVVHDPGAAYLADPEGGLIGEAAVWVERMLTARWTEDTRRF
Ga0210405_100114099	3300021171	Soil	MFLRHPSDRPAVVVDPAAFGVVDPSGGFVGRPGPFGRERVMSALPLDPGPCLLSPPTVVRDPGSSYLADPDNNLIGEPAVWVNRMLTARWVEDTRRF
Ga0210396_109413062	3300021180	Soil	CLPKLGSRRTSRPLFIDAMLAVAPRRDASNSVNMFLRHPSDRPAVVVDPAAFGVVDPSGGVVGRPGPFGRERVMSALPLDPGPCLLSPPTVVRDNGPAYLADPDGALIGEPAVWVNRMLTARWTEDTRRF
Ga0210396_111165072	3300021180	Soil	MLLLPASRASGLNVEHLRHPSPRPSVVVDPAAFGVVDQTGGFVGRAGPLGRERVLFALPLDPGPALLSPPTVVHDPGAAYLADPEGGLIGEAAVWVERMLTARWTEDT
Ga0210396_116926941	3300021180	Soil	MFLRHPSDRPSVVVDPAAYGVGFPPGQVVGRPGPLGRERVMSALPLDPGPALLSPPTVVRDPGAAYLADPDGNLIGEAAVWVGRMLT
Ga0210388_103083982	3300021181	Soil	MFLRHPSDRPSVVVDPAAFGVVDPPGDFVGRPGPFGRERVMSALPLDPGPTLLSPPTVVHDAGSSYLADPDGALIGDPAVWVERMLTARWVEDTRRF
Ga0210388_107711072	3300021181	Soil	MGPWLAPWPLSFVDAMLPRVTRRGASDCVMEHLRHPSDRPSVVVDPAAFGVAIKPPPTIVGRDGPFGRERVMSALPLDPGPALLSPPTVLRDNGSVYLADPDGALIGEPALWVDRMLTARYTEDTRRLG
Ga0210393_100579324	3300021401	Soil	VVVDPAAFGVVDQTGGFVGRAGPLGRERVLFALPLDPGPALLSPPTVVHDPGAAYLADPEGGLIGEAAVWVERMLTARWTEDTRRF
Ga0210393_100877324	3300021401	Soil	MEHLRHPSSRPAVVVDPAAFGVVAPQDGSFVGRSGPLGRERVMSALPLDPGPALLSPPTVVRDPGSAFLADPDGNLIGEAAVWVGRMLTARWTEDTRRF
Ga0210393_104276142	3300021401	Soil	MLGNLSRKAGAPIAVENLRHPSLRPSVVVDPAAFGIVAPDSSFLGRPGPFGRERVLFALPLDPGPALVSPPTVVHDAGSAYLADPDGALIGTPATWVSRMQTARWVEDTRRLAG
Ga0210393_111290911	3300021401	Soil	RDASNSVNMFLRHPSDRPAVVVDPAAFGVVDPSGGVVGRPGPFGRERVMSALPLDPGPCLLSPPTVVRDNGPAYLADPDGALIGEPAVWVNRMLTARWTEDTRRF
Ga0210393_113309772	3300021401	Soil	SIGAGSVMFLRHPSSRPAVVVDPAAFGIVAPDASIVGRPGPFGRERVMSALPLDPGPALLSPPTVVRDPGSAYLADPDGALIGEAAVWVNRMLTARWTEDTRRF
Ga0210397_101165401	3300021403	Soil	MLAVAPRRDASNSVNMFLRHPSDRPAVVVDPAAFGVVDPSGGFVGRPGPFGRERVMSALPLDPGPCLLSPPTVVRDNGPAYLADPDGALIGEPAVWVNRMLTARWTEDTRRF
Ga0210397_102107621	3300021403	Soil	MEHLRHTSDRPAVVVDPAEFGVADSAGQLVGRPGPFGRERVLSALPLDPGPCLLSPPAVVRDPGAAFLADADGNLIGEAAVWVDRMLTARWTEDTR
Ga0210397_108069661	3300021403	Soil	MFLRHPSDRPSVVVDPAAFGVVAPQDGSFVGRAGPLGRERVMSALPLDPGPALLSPPTVVRDPGSAFLADPDGNLIGEAAVWVGRMLTARWTEDTRRF
Ga0210397_111001001	3300021403	Soil	MKHLRHPSPRPGVIVDPANFGIGDPATGTIVGPQGPFGRERVLSALPLDPGPSLLAPPTCVFDGVAFLADPDNNLIGAPAVWVGRMLTAQWTEDTRRF
Ga0210397_112797941	3300021403	Soil	DARRGLSRLMLLLPASRASGLNVEHLRHPSPRPSVVVDPAAFGVVDQTGGFVGRAGPLGRERVLFALPLDPGPALLSPPTVVHDPGAAYLADPEGGLIGEAAVWVERMLTARWTEDTRRF
Ga0210389_103576171	3300021404	Soil	MEHLRHPSPRPSVVVDPAAFGVIDETGGFVGEPGPLGRERVMSALPLDPGPALLSPPTVIRDAGSAFLSDPDGALIGEPAVWVERMLTARFVEDTRRF
Ga0210387_100077232	3300021405	Soil	MFLRHPSDRPSVVVDPAAYGVLDPSSGGLVGRPGPFGRERVMSALPLDPGPCLLSPPTVVHDPGSAYLADPDGALIGEAAVWVDRMLTARWTEDTRRF
Ga0210386_100246838	3300021406	Soil	YACRRPAQGASDSVNMFLRHPSDRPSVVVDPAAYGIIAPDVSIVGRPGPFGRERVMSALPLEPGPALLSPPTVVHDAGSAFLADPDGALIGEPAVWVERMLTARWTEDTRRF
Ga0210386_100767273	3300021406	Soil	VVDPAAFGVVDPTGTFVGRQGPFGRERVLSALPLDPGPSLLSPPTVVRDAGSSFLADPDGALIGEPAVWVQRMLTARWVEDTRRF
Ga0210386_100809453	3300021406	Soil	VVDPAAFGVLDPPSGSFVGRPGPFGRERVMSALPLDPGPALLSPPTVVHDAGSAYLADPDGALIGEAAVWVNRLLTARWTEDTRRF
Ga0210386_101051051	3300021406	Soil	VVDPAAFGVVAPQDGSFVGRSGPLGRERVMSALPLDPGPALLSPPTVVRDPGSAFLADPDGNLIGEAAVWVGRMLTARWTEDTRRF
Ga0210386_107206482	3300021406	Soil	VENLRHPSLRPSVVVDPAAFGIVDPATGDSIGRPAPLGRERVLFALPLDPGPALVSPPTVVRDPGSAYLADPEGALIGTPAIWVSRMQTARWVEDTRRLAG
Ga0210386_108922013	3300021406	Soil	SGLNVEHLRHPSPRPSVVVDPAAFGVVDPARSFVGRPGPLGRERVLFALPLDPGPALLSPPTVVRDPGAAYLADPDGALIGEAAVWVERMLTARWTEDTRRF
Ga0210386_112006591	3300021406	Soil	MLRSPSSPSIGAGSVMFLRHPSSRPAVVVDPAAFGVVAPADGSIVGRPGPFGRERVMSALPLDPGPALLSPPTVVRDPGSAYLADPDGALIGEAAVWVGRMLTARWTEDTRRF
Ga0210391_105637953	3300021433	Soil	SPRPSVVVDPAAFGVVAPDVSIVGRPGPFGRERVMSALPLDPGPCLLSPPTVVRDPGSSYLADPDNNLIGEPAVWVNRILTARWVEDTRRF
Ga0210391_107886432	3300021433	Soil	VVDPAAFGVVAPQDGSFVGRSGPLGRERVMSALPLDPGPALLSPPTVVRDPGSAYLADPDGALIGEAAVWVGRMLTARWTEDTRRF
Ga0210392_100071859	3300021475	Soil	MFLRHPSDRPSVVVDPAAFGVVDPPGDFVGRPGPFGRERVMSALPLDPGPALLSPSTVIRDPGSSFLADPDGALIGEPAVWVERMLTARWVEDTRRF
Ga0210392_100352413	3300021475	Soil	MEHLRHPSPRPSVVVDPAAFGVIDETGGFVGEPGPFGRERVMSALPLDPGPALLSPPTVIRDAGSAFLSDPDGALIGEPAVWVERMLTARFVEDTRRF
Ga0210392_106967452	3300021475	Soil	VENLRHPSLRPSVVVDPAAFGIVDPATGDSIGRPAPLGRERVLFALPLDPGPALVSPPTVVRDPGSAYLADPQGALIGTPAIWVSRMQTARWVEDTRRLAG
Ga0210398_101351373	3300021477	Soil	VVDPAAFGVVDPTGTFVGRQGPFGRERVLSALPLDPGPALLSPPTVVRDAGSSFLADPDGALIGEPAVWVQRMLTARWVEDTRRF
Ga0210398_107911252	3300021477	Soil	MLAVAPRRDASNSVNMFLRHPSDRPAVVVDPAAFGVVDPSGGFVGRPGPFGRERVMSALPLDPGPCLLSPPTVVRDPGSSYLADPDNNLIGEPAVWVNRMLTARWVEDTRRF
Ga0210410_103044442	3300021479	Soil	MEHLRHPSPRPSVVVDPADFGVGFPPGQVVGRPGPFGRERVMSALPLDPGPALLSPPTVVRDPGAAYLADPDGNLIGEAAVWVGRMLTARWTEDTRRF
Ga0210409_107784911	3300021559	Soil	EHLRHPSPRPSVVVDPAAYGVGFPLPSGQVIGRPGPFGRERVMSALPLDPGPALLSPPTVVRDPGAAYLADPDGNLIGEAAVWVGRMLTARWTEDTRRF
Ga0242665_103521292	3300022724	Soil	VVDPAAYGVGFPPGQVVGRPGPFGRERVMSALPLDPGPALLSPPTVVRDPGAAYLADPDGALIGEAAVWVGRMLTARWTEDTRRF
Ga0208731_10070912	3300027029	Forest Soil	MLGNLSRKAGAPIAVENLRHPSLRPSVVVDPAAFGVVAPDSSFFGRPAPLGRERVLFALPLDPGPALVSPPTVVRDPGSSYLADPDGALIGVAATWVSRMQTARWVEDTRRLAG
Ga0208731_10094331	3300027029	Forest Soil	VVVDPAAFGVVAPQDGSFVGRAGPLGRERVMSALPLDPGPALLSPPTVVRDPGSAFLADPDGNLIGEAAVWVGRMLTARWTEDTRRL
Ga0208724_10274371	3300027064	Forest Soil	VAPQDWSFVGRAGPLGRERVMSALPLDPGPALLSPPTVVRDPGSAFLADPDGNLIGEAAVWVGRMLTARWTEDTRRF
Ga0208724_10358101	3300027064	Forest Soil	RHAQGASDSVMEHLRHPSSRPAVVVDPAAFGVVDPTGGFLGRPNPLGRERVMSALPLDPGPALLSPPTVVHDNGPAFLADPDGALIGEPAVWVNRMLTARWVEDTRRF
Ga0208236_10007582	3300027066	Forest Soil	MKHLRHPSPRPGVVLDPAGFAISDPTNSTILGPQGPFGRERVLSALPLEPGPMPFAPPVCVNDGVAFLADPDGNLIGMPGLWIPRMLKATYAADTRRLG
Ga0208859_10042133	3300027069	Forest Soil	MFLRHPSDRPAVVVDPAAFGVVDPSGGFVGRPGPFGRERVMSALPLDPGPCLLSPPTVVRDPGSSYLADPDNNLIGEPAVWVNRMLTARWTEDTRRF
Ga0208859_10045043	3300027069	Forest Soil	MLGNLSRKAGAPIAVENLRHPSLRPSVVVDPAAFGIVAPDSSLVGCPAPLGRERVLFALPLEPGPSLLSPPTVLRDPGSAYVADPQGALIGTPAVWVSRMQTARWVEDTRRLAG
Ga0208859_10439451	3300027069	Forest Soil	VVDPAAFGVVAPQDGSFVGRAGPLGRERVMSALPLDPGPALLSPPTVVRDPGSAFLADPDGNLIGEAAVWVGRMLTARWTEDTRRF
Ga0208099_10320571	3300027096	Forest Soil	IGLWICLPKLGPWRTSRPLSFDATLAAVGRRDASDSVNMFLRHPSDRPSVVVDPADFGVGFPPGQVVGRPGPFGRERVMSALPLDPGPALLSPPTVVRDPGAAYLADPDGNLIGEAAVWVGRMLTARWVEDTRRF
Ga0208603_10431381	3300027109	Forest Soil	MLLLPASRASGLNVEHLRHPSPRPSVVVDPAAFGVVDQTGGFVGRAGPLGRERVLFALPLDPGPALLSPPTVVHDPGAAYLADPEGGLIGEAAVWVERMLTARWT
Ga0209732_10024953	3300027117	Forest Soil	VVDPAAFGVVDPSPAFVGRPGPLGRERVMSALPLNPGPALLAPPHVVRDAGSSFLADPDGALIGEPAVWVNRMLTARWTEDTRRLG
Ga0208608_1003953	3300027165	Forest Soil	MFLRHPSDRPSVVVDPAAFGVGFPPGQVVGRPGPLGRERVMSALPLDPGPALLSPPTVVRDPGSAYLADPDGNLIGEAAVWVGRMLTARWTEDTRRF
Ga0208239_10001952	3300027168	Forest Soil	MKHLRNPSPRPGVVLDPAGFAIGDPTNSTILGPQGPFGRERVLSALPLEPGPMPFAPPVCVNDGVAFLADPDGNLIGMPGLWIPRMLKATYAADTRRLG
Ga0208239_10069232	3300027168	Forest Soil	MQHLRHPSPRPSVVVDPAAFGVVDPSPAFVGRPGPLGRERVMSALPLNPGPALLAPPHVVRDAGSSFLADPDGALIGEPAVWVNRMLTARWTEDTRRLG
Ga0209139_101005042	3300027795	Bog Forest Soil	VVDPAAFGVVDPATGTFVGRPGPLGRERVMSALPLDPGPALLSPPTVVHDAGSAFLADPDGALIGDPAVWVNRMLSARWTEDTRRLG
Ga0209693_100080066	3300027855	Soil	MFLRHPSDRPSVVVDPAAFGVVAPQDGSFVGRPRPLGRERVMSALPLDPGPALLSPPTVVRDPGAAFLADPDGNLIGEAAVWVGRMLTARWTEDTRRF
Ga0209693_100996503	3300027855	Soil	VVDPAAFGVLDPLTPAIVGRPGPFGRERVMSALPLDPGPALLSPPTVVRDPGSAFLADPDGALIGDPAVWVGRMLTARWTEDTRRF
Ga0209169_100280043	3300027879	Soil	VVDPAAFGVVAPQDGSFVGRPRPLGRERVMSALPLDPGPALLSPPTVVRDPGSAFLADPDGALIGDPAVWVGRMLTARWTEDTRRF
Ga0209275_100008829	3300027884	Soil	MEHLRHPSSRPAVVVDPAAFGVVDPTGGFLGRPNPLGRERVMSALPLDPGPALLSPPTVVHDNGPAFLADPDGALIGEPAVWVNRMLTARWVEDTRRF
Ga0209275_100023109	3300027884	Soil	MFLRHPSDRPSVVVDPAAFGVVAPQDGSFVGRPGPLGRERVMSALPLDPGPALLSPPTVVRDPGSAFLADADGNLIGEGAVWVGRMLTARWTEDTRRF
Ga0209275_100058824	3300027884	Soil	MEHLRHPSDRPSVVVDPAAFGVVAPIGRPGPLGRERVMSALPLDPGPALLSPPTVVRDPGSAYLADPDGALIGEAAVWVGRMLTARWVEDTRRF
Ga0209275_100326173	3300027884	Soil	VDPASGSLVGRPGPFGRERVMSALPLDPGPALLSPPTVVHDPGSSYLADPDGALIGEPAVWVGRMLTARWTEDTRRLWG
Ga0209275_102223383	3300027884	Soil	MFLRPPSDRPSVVVDPAAFGVGFPPPSGQVIGRPGPFGRERVMSALPLDPPPTLLSPPTVVRDAGSAYFADPDGALIGEPAVWVDRMLTARWAEDTRRF
Ga0209380_1000665314	3300027889	Soil	MFLRHPSDRPSVVVDPAAFGVVAPQDGSFVGRAGPLGRERVMSALPLDPGPALLSPPTVVRDPGSAFLADPDGNLIGEAAVWVGRMLTARWTEDTRRL
Ga0308309_100013169	3300028906	Soil	MFLRHPSDRPSVVVDPAAYGVLDPLTPAIVGRPGPFGRERVMSALPLDPGPALLSPPTVVHDPGSAFLADPDGALIGEAAVWVNRMLTARWVEDTRRF
Ga0308309_100035955	3300028906	Soil	MEHLRHPSDRPSVVVDPAAYGIGVGRPGPFGRERVMSALPLDPGPCLLSPPTVVRDPGAAYLADPDGALIGEAAVWVGRMLTARWTEDTRRF
Ga0308309_1000371610	3300028906	Soil	MLCCPPHRAKDRAPIAVENLRHPSLSPSVVVDPAAFGVVAPDSAFVGRPAPLGRERVLFALPLDPGPALLSPPIVVRDPGSAYLADPDGALIGVAATWVSRMQTARWVEDTRRLAG
Ga0308309_1000425510	3300028906	Soil	MEHLRDPSPRPSVVVDPAAFGVVAPADGSFVGLPGPLGRERVMSALPLDPGPALLSPPTVVRDASSAYLADPDGALIGEAAVWVNRMLTARWTEATRRF
Ga0308309_100051554	3300028906	Soil	VVDPAAFGVVAPQDGSFVGRPRPLGRERVMSALPLDPGPALLSPPTVVRDPGAAFLADPDGNLIGEAAVWVGRMLTARWTEDTRRF
Ga0308309_106843102	3300028906	Soil	MSFLRHPSPRPSIVVDPADFGVVAPQDGSFVGRSGPFGRERVMSALPLDPGPALLSPPTVVRDPGAAYLADPDGNLIGEAAVWVGRMLTARWTEDTRRF
Ga0308309_107662453	3300028906	Soil	FLRHPSDRPSVVVDPAAFGVLDPLTPAIVGRPGPFGRERVMSALPLDPGPALLSPPTVVRDPGSAFLADPDGALIGDPAVWVGRMLTARWTEDTRRF
Ga0308309_115691371	3300028906	Soil	KHLRHPSPRPGVIVDPANFGIGDPATGTIVGPQGPFGRERVLSALPLDPGPSLLAPPTCVFDGVAFLADPDNNLIGAPAVWVGRMLTAQWTEDTRRF
Ga0310686_1161852991	3300031708	Soil	PSPTVTVDPAAFGVVDQTGDFLGRPGPFGRERVMSALPLDPGPALLAPPTVIHDGSSSFLADPDDNLIGEPAVWVSRMLTARWTEDTRRLG
Ga0307476_100023359	3300031715	Hardwood Forest Soil	VVVDPAAFGVVAPDSSFFGRPAPLGRERVLFALPLDPGPALVSPPTVVRDPGSSYLADPDGALIGVAATWVSRMQTARWVEDTRRLAG
Ga0307476_100810903	3300031715	Hardwood Forest Soil	MLPRVAVNPGAGCVMSFLRGPSPRPSVVVDPAAFGIEDPTGDFVGRQGPFGRERVMSALPLDPGPALLSPPTVVHDAGPAYLADPDGALIGEPAVWVERMLTARWTEDTRRF
Ga0307476_100864273	3300031715	Hardwood Forest Soil	MEHLRHPSPRPSVVVDPAAFGVIDETGGFVGEPGPLGRERVMSALPLDPGPALLSPPTVIRDAGSAFLADPDGALIGEPAVWVERMLTARFVEDTRRF
Ga0307474_100470133	3300031718	Hardwood Forest Soil	MEHLRHPSPRPSVVVDPAAFGVIDETGGFVGEPGPLGRERVMSALPLDPGPALLSPPTVIRDPGSAFLADPDGALIGEPAVWVERMLTARFVEDTRRF
Ga0307474_101716533	3300031718	Hardwood Forest Soil	MFLRHPSDRPSVVVDPAAYGVLDPTGGVVGRAGPFGRERVMSALPLEPGPALLSPPTVVRDAGSAYLADPDGALIGEAALWVERMLTARWTEDTRRF
Ga0307478_100040149	3300031823	Hardwood Forest Soil	MKHLRNPSPRPGVVLDPAGFAISDPTTSTILGPQGPFGRERVLSALPLEPGPMPFAPPVCVNDGVAFLADPDGNLIGMPGLWIPRMLKATYAADTRRLG
Ga0307478_100166541	3300031823	Hardwood Forest Soil	GVIDETGGFVGEPGPLGRERVMSALPLDPGPALLSPPTVIRDPGSAFLADPDGALIGEPAVWVERMLTARFVEDTRRF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089221

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences