Metagenome / Metatranscriptome Family F089279

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089279
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	92 residues
Representative Sequence	LLTLTIVTIVGGAVLGLRYKVFILLAVATFVLVFVIGVGVAQGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRSGEHITQADVNSGT
Number of Associated Samples	83
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.48 %
% of genes near scaffold ends (potentially truncated)	45.87 %
% of genes from short scaffolds (< 2000 bps)	85.32 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (65.138 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.358 % of family members)
Environment Ontology (ENVO)	Unclassified (45.872 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.972 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 74.47% β-sheet: 0.00% Coil/Unstructured: 25.53%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF13551	HTH_29	3.67
PF04892	VanZ	2.75
PF13727	CoA_binding_3	1.83
PF13586	DDE_Tnp_1_2	0.92
PF01972	SDH_sah	0.92
PF01381	HTH_3	0.92
PF13565	HTH_32	0.92
PF02706	Wzz	0.92
PF00775	Dioxygenase_C	0.92
PF02796	HTH_7	0.92
PF01527	HTH_Tnp_1	0.92
PF00872	Transposase_mut	0.92
PF07228	SpoIIE	0.92
PF03466	LysR_substrate	0.92
PF12706	Lactamase_B_2	0.92
PF06463	Mob_synth_C	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.83
COG2896	GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)	Coenzyme transport and metabolism [H]	0.92
COG3206	Exopolysaccharide export protein/domain GumC/Wzc1	Cell wall/membrane/envelope biogenesis [M]	0.92
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.92
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.92
COG3524	Capsule polysaccharide export protein KpsE/RkpR	Cell wall/membrane/envelope biogenesis [M]	0.92
COG3765	LPS O-antigen chain length determinant protein, WzzB/FepE family	Cell wall/membrane/envelope biogenesis [M]	0.92
COG3944	Capsular polysaccharide biosynthesis protein YveK	Cell wall/membrane/envelope biogenesis [M]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.14 %
All Organisms	root	All Organisms	34.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.14 %
cellular organisms	root	All Organisms → cellular organisms	34.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.14 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.14 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.18 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.14 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.34 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.42 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.92 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.14 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.42 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.50 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.92 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.92 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.14 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.42 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.59 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.92 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	0.92 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.14 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.42 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.83 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	0.92 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.92 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.14 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.42 %
Bradyrhizobium sp. WSM1253	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1253	1.83 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.92 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.92 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10159414	Not Available	540	Open in IMG/M
3300001081\|JGI12662J13196_1014443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1253	650	Open in IMG/M
3300001545\|JGI12630J15595_10004390	All Organisms → cellular organisms → Bacteria → Proteobacteria	3067	Open in IMG/M
3300001545\|JGI12630J15595_10011306	Not Available	1928	Open in IMG/M
3300001661\|JGI12053J15887_10406457	Not Available	654	Open in IMG/M
3300002245\|JGIcombinedJ26739_100062081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3429	Open in IMG/M
3300002245\|JGIcombinedJ26739_100170588	Not Available	2058	Open in IMG/M
3300002245\|JGIcombinedJ26739_100207980	Not Available	1849	Open in IMG/M
3300002245\|JGIcombinedJ26739_100313165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1453	Open in IMG/M
3300002245\|JGIcombinedJ26739_101328172	Not Available	611	Open in IMG/M
3300004633\|Ga0066395_10775159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	574	Open in IMG/M
3300005332\|Ga0066388_100562417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1768	Open in IMG/M
3300005434\|Ga0070709_10763595	Not Available	756	Open in IMG/M
3300005435\|Ga0070714_100389318	Not Available	1315	Open in IMG/M
3300005436\|Ga0070713_100370108	Not Available	1333	Open in IMG/M
3300005602\|Ga0070762_10642449	Not Available	708	Open in IMG/M
3300005713\|Ga0066905_100685730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1253	877	Open in IMG/M
3300005713\|Ga0066905_101726270	Not Available	576	Open in IMG/M
3300006028\|Ga0070717_10099373	Not Available	2469	Open in IMG/M
3300006046\|Ga0066652_101243462	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300006175\|Ga0070712_100279418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1344	Open in IMG/M
3300009792\|Ga0126374_11890845	Not Available	502	Open in IMG/M
3300010046\|Ga0126384_10017717	All Organisms → cellular organisms → Bacteria → Proteobacteria	4551	Open in IMG/M
3300010046\|Ga0126384_10746950	Not Available	871	Open in IMG/M
3300010047\|Ga0126382_10262648	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300010047\|Ga0126382_11671528	Not Available	593	Open in IMG/M
3300010358\|Ga0126370_10551045	Not Available	985	Open in IMG/M
3300010358\|Ga0126370_12038989	Not Available	562	Open in IMG/M
3300010359\|Ga0126376_10205992	Not Available	1634	Open in IMG/M
3300010359\|Ga0126376_10499337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1126	Open in IMG/M
3300010361\|Ga0126378_10227346	Not Available	1952	Open in IMG/M
3300010361\|Ga0126378_10494035	Not Available	1339	Open in IMG/M
3300010362\|Ga0126377_10369670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1436	Open in IMG/M
3300010375\|Ga0105239_13502425	Not Available	510	Open in IMG/M
3300010376\|Ga0126381_101745933	Not Available	899	Open in IMG/M
3300010398\|Ga0126383_10102077	All Organisms → cellular organisms → Bacteria	2567	Open in IMG/M
3300010398\|Ga0126383_13508439	Not Available	512	Open in IMG/M
3300012198\|Ga0137364_10625615	Not Available	811	Open in IMG/M
3300012202\|Ga0137363_10397848	Not Available	1147	Open in IMG/M
3300012202\|Ga0137363_10753345	Not Available	825	Open in IMG/M
3300012362\|Ga0137361_10256476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1594	Open in IMG/M
3300012582\|Ga0137358_10675947	Not Available	691	Open in IMG/M
3300012923\|Ga0137359_10443000	Not Available	1149	Open in IMG/M
3300012948\|Ga0126375_10208948	Not Available	1289	Open in IMG/M
3300016270\|Ga0182036_10685958	Not Available	828	Open in IMG/M
3300016445\|Ga0182038_10424487	Not Available	1120	Open in IMG/M
3300018431\|Ga0066655_10835962	Not Available	627	Open in IMG/M
3300019887\|Ga0193729_1117722	Not Available	992	Open in IMG/M
3300019890\|Ga0193728_1299220	Not Available	612	Open in IMG/M
3300020579\|Ga0210407_10519543	Not Available	930	Open in IMG/M
3300020579\|Ga0210407_10633462	Not Available	832	Open in IMG/M
3300020581\|Ga0210399_10639673	Not Available	878	Open in IMG/M
3300020581\|Ga0210399_11193342	Not Available	605	Open in IMG/M
3300020583\|Ga0210401_11348506	Not Available	571	Open in IMG/M
3300021168\|Ga0210406_10221538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1562	Open in IMG/M
3300021168\|Ga0210406_10455431	Not Available	1017	Open in IMG/M
3300021178\|Ga0210408_10999335	Not Available	647	Open in IMG/M
3300021432\|Ga0210384_10381311	Not Available	1270	Open in IMG/M
3300021432\|Ga0210384_11883262	Not Available	504	Open in IMG/M
3300021444\|Ga0213878_10045912	All Organisms → cellular organisms → Bacteria → Proteobacteria	1696	Open in IMG/M
3300021475\|Ga0210392_11008782	Not Available	623	Open in IMG/M
3300021478\|Ga0210402_10951154	Not Available	786	Open in IMG/M
3300021479\|Ga0210410_11364747	Not Available	601	Open in IMG/M
3300021560\|Ga0126371_10033008	All Organisms → cellular organisms → Bacteria → Proteobacteria	4861	Open in IMG/M
3300022531\|Ga0242660_1133413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	637	Open in IMG/M
3300025906\|Ga0207699_10997604	Not Available	619	Open in IMG/M
3300025916\|Ga0207663_10112378	Not Available	1850	Open in IMG/M
3300025939\|Ga0207665_10019524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4456	Open in IMG/M
3300027383\|Ga0209213_1068799	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300027537\|Ga0209419_1058987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	750	Open in IMG/M
3300027583\|Ga0209527_1006568	All Organisms → cellular organisms → Bacteria → Proteobacteria	2406	Open in IMG/M
3300027591\|Ga0209733_1130664	Not Available	620	Open in IMG/M
3300027603\|Ga0209331_1001253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8476	Open in IMG/M
3300027603\|Ga0209331_1002837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5122	Open in IMG/M
3300027603\|Ga0209331_1007808	Not Available	2844	Open in IMG/M
3300027603\|Ga0209331_1104137	Not Available	692	Open in IMG/M
3300027610\|Ga0209528_1011660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1904	Open in IMG/M
3300027610\|Ga0209528_1052739	Not Available	901	Open in IMG/M
3300027651\|Ga0209217_1132462	Not Available	698	Open in IMG/M
3300027727\|Ga0209328_10085826	Not Available	963	Open in IMG/M
3300027738\|Ga0208989_10128436	Not Available	857	Open in IMG/M
3300027903\|Ga0209488_10640076	Not Available	767	Open in IMG/M
3300028047\|Ga0209526_10068804	All Organisms → cellular organisms → Bacteria → Proteobacteria	2489	Open in IMG/M
3300028047\|Ga0209526_10115083	Not Available	1890	Open in IMG/M
3300028047\|Ga0209526_10160277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1573	Open in IMG/M
3300028814\|Ga0307302_10104940	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300029636\|Ga0222749_10125481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1229	Open in IMG/M
3300031543\|Ga0318516_10128836	Not Available	1446	Open in IMG/M
3300031573\|Ga0310915_10137402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1682	Open in IMG/M
3300031573\|Ga0310915_10415662	Not Available	955	Open in IMG/M
3300031719\|Ga0306917_11334079	Not Available	554	Open in IMG/M
3300031765\|Ga0318554_10651013	Not Available	592	Open in IMG/M
3300031781\|Ga0318547_10300676	Not Available	975	Open in IMG/M
3300031781\|Ga0318547_10397945	Not Available	845	Open in IMG/M
3300031795\|Ga0318557_10417041	Not Available	617	Open in IMG/M
3300031833\|Ga0310917_10089970	All Organisms → cellular organisms → Bacteria	1959	Open in IMG/M
3300031879\|Ga0306919_10713774	All Organisms → cellular organisms → Bacteria → Proteobacteria	772	Open in IMG/M
3300031897\|Ga0318520_11088154	Not Available	506	Open in IMG/M
3300031942\|Ga0310916_10740492	Not Available	830	Open in IMG/M
3300031945\|Ga0310913_10559803	Not Available	811	Open in IMG/M
3300031947\|Ga0310909_10101037	All Organisms → cellular organisms → Bacteria	2318	Open in IMG/M
3300031954\|Ga0306926_10015388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8640	Open in IMG/M
3300031954\|Ga0306926_10149961	All Organisms → cellular organisms → Bacteria	2887	Open in IMG/M
3300032035\|Ga0310911_10695236	Not Available	589	Open in IMG/M
3300032059\|Ga0318533_10103275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1975	Open in IMG/M
3300032065\|Ga0318513_10430818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	644	Open in IMG/M
3300032066\|Ga0318514_10749623	Not Available	519	Open in IMG/M
3300032076\|Ga0306924_11097314	Not Available	867	Open in IMG/M
3300032091\|Ga0318577_10559060	Not Available	544	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.08%
Host-Associated	Host-Associated	0.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.08%
Plants	Host-Associated → Plants	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.22%
Loam	Environmental → Terrestrial → Soil → Loam	34.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	27.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.34%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	22.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.60%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.75%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300001081	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_101594141	3300000597	Forest Soil	LLLTLTIVTIVGGAVLGLRYKVFILLAVATFVLVFVIGVGVAQGAGIWKIALDMMVATTALQLGYAGGSAFAAARKRRKLRSGEHITQADVNSGT*
JGI12662J13196_10144431	3300001081	Forest Soil	MLTLTIVTILCGAVLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWRIALDMMVAMTALQLGYAGGSAFAAARERCKNGVTHINQRGAFSAQR*
JGI12630J15595_100043903	3300001545	Forest Soil	MLTLTIVTILCGAMLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWGIALDMMVATTALQLGYAGVSAFAAARKRCKNGVTHINQRGALSAVR*
JGI12630J15595_100113061	3300001545	Forest Soil	MLTLTIVTILCGAVLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWRIALDMMVAMTALQLGYAGGSAFAAARERCKNGV
JGI12053J15887_104064572	3300001661	Forest Soil	MLTLTIVTILGGAVLGLRYKIFILLPAATFMLVFVIGVDVARGAGIWRIALDMMVAMTALQLGYAGGSAFAAARERCKNGVTHINQRGAVSAVR*
JGIcombinedJ26739_1000620817	3300002245	Forest Soil	MLTLTIVTILCGILCGAVLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWRIALDMMVATTALQLGYAGGSAFAAARALQAPQWRAHHVY*
JGIcombinedJ26739_1001705881	3300002245	Forest Soil	MLTLTIVTILGGAVLGLRYKIFILLPAATFMLVFVIGVDVARGAGIWRIALDMMVAMTALQLGYAGGSAFAAARERCKNGVTHINQRGAVSAVR
JGIcombinedJ26739_1002079802	3300002245	Forest Soil	MLTLTIVTILVGAVLGLRYKVFTLLPAVTFVLVFVIGVGVARGAGIWRIALDMMVATTALQLGYAGGSAFAAARERRKLHSGEHTT*
JGIcombinedJ26739_1003131653	3300002245	Forest Soil	MLGLRYKIFILLPAATFMLVFVIGFGVARGAGNWRIALDMMVAMTALQLGYAGGSAFAAARERCKNGVTHINQRGAVSAVR
JGIcombinedJ26739_1013281722	3300002245	Forest Soil	MLTLTIVTILCGAVLGLRYKIFILLPAATFMLVFVIGFGVAREAGIWRIALDMMVATTALQLGYAGGSAFAAA
Ga0066395_107751591	3300004633	Tropical Forest Soil	RQGGNVYLTKDTRIFEDKEHAHSGARLLLTLTIVTIVGGAVLGLRYKVFILLAVATFVLVFVIGVGVARGAGIWRIALEMMVAMTALQLGYAGGSAFTAARKRCKLRRDEHITQEDVNSGT*
Ga0066388_1005624172	3300005332	Tropical Forest Soil	LLTLTIVTIVGGAVLGLRYKVFILLAVATFVLVFVIGVGVAQGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRSAEHITQADVNSGT*
Ga0070709_107635951	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LLLILTVVTMLGGAVLGLRYKVFILLPAATFVLVFVIGVGVAYGAGIWSIALDMMIAAMALQLGYAGGSAFAAAWKRRKLRRGEHSIEADVNSDI*
Ga0070714_1003893182	3300005435	Agricultural Soil	LLLILTVVTMLGGAVLGLRYKVFILLPAATFVLLFVIGVGVAHGADIWSIALDMMVAATALQLGYAGGSAFAAAWKRRKLRRGEHSIEADVNSDI*
Ga0070713_1003701082	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MLGGAVLGLRYKVFILLPAATFVLVFVIGVGVAYGAGIWSIALDMMIAAMALQLGYAGGSAFAAAWKRRKLRRGEHSIEADVNSDI*
Ga0070762_106424492	3300005602	Soil	MLTLTIVTILCGAVLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWGIALDMMVAMTALQLGYAGGSAFAAARERCKNGVTHINQRGAVSAVR*
Ga0066905_1006857301	3300005713	Tropical Forest Soil	LLTLTIVTIVGGAVLGLRYKVFILLAVATFVLVFVIGVGVAQGAGIWKIALDMMVATTALQLGYAGGSAFAAARKRRKLRS
Ga0066905_1017262702	3300005713	Tropical Forest Soil	TLIRGLRLLLTLTIVTVLGGAVLGLRYKVFILLPVATFVLVFVIGVAVARGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRSGENIAQRRM*
Ga0070717_100993731	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LLILTVVTMLGGAVLGLRYKVFILLPAATFVLVFVIGVGVAYGAGIWSIALDMMIAAMALQLGYAGGSAFAAAWKRRKLRRGEHSIEADVNSDI*
Ga0066652_1012434622	3300006046	Soil	TILGGAVLGLRYKVFILLPAGTFVLVFVIGVGVAHGAGIWSIALDMMVATTALQLGYAGGSAFAAARKRRKLRREEHTIEADVNSDI*
Ga0070712_1002794182	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LLILTVITILGGAVLGLRYKVFILLPAATFVLVFVIGVGVAYGAGIWSIALDMMIAAMALQLGYAGGSAFAAAWKRRKLRRGEHSIEADVNSDI*
Ga0126374_118908451	3300009792	Tropical Forest Soil	LLLTLTIVTIVGGAVLGLRYKVFILLAVATFVLVFVIGVGVAQGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRSAEHITQADVNSGT*
Ga0126384_100177172	3300010046	Tropical Forest Soil	VSIPQKTQGYRKIKSSTLIRGLRLLLTLTIVTVLGGAGLGLRYKVFILLPAATFVLVFVIGVGVARGAGIWRIALEMMVAMTALQLGYAGGSAFTAARKRCKLRRDEHITQEDVNSGT*
Ga0126384_107469501	3300010046	Tropical Forest Soil	TIVTVLGGAVLGLRYKVFILLPVATFVLVFVIGVAVARGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRSGENIAQRRM*
Ga0126382_102626483	3300010047	Tropical Forest Soil	VSIPQKTQGYRKIKSSTLIRGLRLLLTLTIVTVLGGAGLGLRYKVFILLPAATFVLVFVIGVGVARGAGIWRIALEMMVAMTALQLGYAGGSAFTAARQRCKLRRDEHITQEDVNSGT*
Ga0126382_116715281	3300010047	Tropical Forest Soil	LLLTLTIVTIVGGAVLGLRYKVFILLAVATFVLVFVIGVGVAQGAGIWKIALDMMVATTALQLGYAGGSAFAAARKRRKLRSGEHITQ
Ga0126370_105510452	3300010358	Tropical Forest Soil	LLLTLTIVTIVGGAVLGLRYKVFILLAVATFVLVFVIGVGVAQGAGIWKIALDMMVATTALQLGYAGGSAFAAARKRRKLRSAEHITQADVNSGT*
Ga0126370_120389891	3300010358	Tropical Forest Soil	FYLIKDTKMSQEKSSTLIRGLRLLLTLTIVTVLGGAVLGLRYKVYILLLAATFVLVFVIGVGVARGAGIWRIALEMMVAMTALQLGYAGGSAFTAARKRCKLRRDEHITQEDVNSGT*
Ga0126376_102059921	3300010359	Tropical Forest Soil	VLGLRYKVYILLLAATFVLVFVIGVGVARGAGIWRIALEMMVAMTALQLGYAGGSAFTAARKRCKLRRDEHITQEDVNSGT*
Ga0126376_104993373	3300010359	Tropical Forest Soil	LLLTLTIVTIVGGAVLGLRYKVFILLAVATFVLVFVIGVGVAQGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRSGENIAQRRM*
Ga0126378_102273461	3300010361	Tropical Forest Soil	VLGLRYKVFILLAVATFVLVFVIGVGVAQGAGIWKIALDMMVATTALQLGYAGGSAFAAARKRRKLRSGENIAQRRM*
Ga0126378_104940354	3300010361	Tropical Forest Soil	VLGLRYKVFILLAVATFVLVFVIGVGVAQGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRSGEHITQADVNSGT*
Ga0126377_103696701	3300010362	Tropical Forest Soil	VSIPQKTQGYRKIKSSTLIRGLRLLLTLTIVTVLGGAVLGLRYKVFILLPAATFVLVFVIGVGVARGAGIWRIALEMMVAMTALYAGGSAFTAARKRRKLRSGEDTIEADVNSGT*
Ga0105239_135024251	3300010375	Corn Rhizosphere	LLILTVVTMLGGAVLGLRYKVFILLPAATFVLVFVIGVGVAYGAGIWSIALDMMIAAMALQLGYAGGSAFAAAWKRRKLRRGEHSIEADVN
Ga0126381_1017459331	3300010376	Tropical Forest Soil	LLLTLTIVTVLGGAVLGLRYKVYILLLAATFVLVFVIGVGVARGAGIWRIALEMMVAMTALQLGYAGGSAFTAARKRCKLRRDEHITQEDVNSGT*
Ga0126383_101020773	3300010398	Tropical Forest Soil	LLLTLTIVTVLGGAGLGLRYKVFILLPAATFVLVFVIGVGVARGAGIWRIALEMMVAMTALQLGYAGGSAFTAARQRCKLSRDEHITQEDVNSGT*
Ga0126383_135084392	3300010398	Tropical Forest Soil	IPQKTRGYRKIRAATLIRGLRLLLTLTIVTVLGGAVLGLRYKVFILLPAATFVLVFVIGVGVAHGAGIWSIALDMMVAAAALQLGYAGGSAFAAAWKRRKLRRGEHTIEADVNSDI*
Ga0137364_106256152	3300012198	Vadose Zone Soil	LGLRYKIFILLPAATFVLVFVIGVGIARGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRREEHTIEADVNSDI*
Ga0137363_103978483	3300012202	Vadose Zone Soil	LLLTLTIVTILGGVVLGLRYKVFILLPAATFVLGFVIGVGVAQGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRRGEDITQADVNSGT*
Ga0137363_107533451	3300012202	Vadose Zone Soil	KIFILLPAATFMLVFVIGFGVAREAGIWRIALDMMVATTALQLGYAGGSAFAAVRERRKLHRGEHTTQADVALFASFFTLLGEQLPTLLAT*
Ga0137361_102564763	3300012362	Vadose Zone Soil	LLLTLTIVTILGGVVLGLRYKVFILLPAATFVLVFVIGVGVAQGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRRGEDITQADVNSGT*
Ga0137358_106759471	3300012582	Vadose Zone Soil	LLLILTVVTILGGALLGLRYKVFILLPAATFVLVFVIGVGVAHGAGIWSIALDMMVAATALQLGYAGGSAFAAARKRRKLRSGEEHIIDADVNSDT*
Ga0137359_104430001	3300012923	Vadose Zone Soil	LLLTLTIVAILSGAVLGLRYKVFILLPAATFVLMFVIGVGVARGAGIWGIALDMMVATTALQLGYAGGSAFAAARKRRKLRSGEHINEADVNSDT*
Ga0126375_102089481	3300012948	Tropical Forest Soil	LLLTLTIVTVLGGAVLGLRYKVFILLPVATFVLVFVIGVAVARGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRSGENIAQRRM*
Ga0182036_106859581	3300016270	Soil	LLGLRYKVFILLPASTSVLVCVIGIGVARGAGIWRIAPDVIVATTALQLGYVGGSAFAAVRERRKLHRGEHTTQADVALFASFFALLGEQLPTLLAT
Ga0182038_104244871	3300016445	Soil	MLTLTIVTMVGGALIGLRYKVFILLPASTSVLVCVIGIGVARGAGIWRIAPDVIVATTALQLGYVGGSAFAAVRERRKLHRGEHTTQADVALFASFFALLGEQLPTLLAT
Ga0066655_108359621	3300018431	Grasslands Soil	LLLILTVITILGGAVLGLRYKVFILLPAATFVLVFVIGVGIARGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRREEHTIEADVNSDI
Ga0193729_11177222	3300019887	Soil	MLTLTIVTILCGILCGAVLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWRIALDMMVATTALQLGYAGVSAFAAARKRCKNGVTHINQRGALSAVR
Ga0193728_12992201	3300019890	Soil	MLTLTIVTILCGILCGAVLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWRIALDMMVATTALQLGYAGGSAFAAARALQAPQWRAHHVY
Ga0210407_105195432	3300020579	Soil	MLTLTIVTILVGAVLGLRYKVFTLLPAVTFVLVFVIGVGVARGAGIWRIALDMMVATAALQLGYAGGSAFAAARERRKLHSGEHTT
Ga0210407_106334622	3300020579	Soil	MLTLTIVTILCGAVLGLRYKIFILLPAATFMLVFVIGFGVAREAGIWRIALDMMVATTALQLGYAGGSAFAAARALKAPQWRAHHVY
Ga0210399_106396732	3300020581	Soil	MLTLTIVTILFGAVLGLRYKVFTLLPAVTFVLVFVIGVGVARGAGIWRIALDMMVATAALQLGYAGGSAFAAARERRKLHSGEHTT
Ga0210399_111933421	3300020581	Soil	MLTLIIVTILCGAVLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWRIALDMMVAMTALQLGYAGGSAFAAARERCKNGVTHINQRGAF
Ga0210401_113485062	3300020583	Soil	PAATFMLVFVIGVGVARGAGIWRIALDMMVAMTALQLGYAGASAFAAARERCKNGVSHINQRGAVSAVR
Ga0210406_102215381	3300021168	Soil	MLTLTIVTILCGAVLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWRIALDMMVATTALQLGYAGGSAFAAARALQAPQLIAHHVY
Ga0210406_104554312	3300021168	Soil	MLTLTIVTILVGAVLGLRYKVFTLLPAVTFVLVFVIGVGVARGAGIWRIALDMMVATAALQLGYAGGSAFAAARE
Ga0210408_109993351	3300021178	Soil	MLTLTIVTILCGAVLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWRIALDMMVAMTALQLGYAGGSAFAAARERCKNGVTHINQRGAFSAQR
Ga0210384_103813114	3300021432	Soil	MLTLTIVTILCGAVLGLRYKIFILLPAATFMLVFVIGLGVARGAGIWRIALDMMVAMTALQLGYAGGSAFAAARERCKNGVTQINQRGA
Ga0210384_118832621	3300021432	Soil	LLLILTVVTILGGAVLGLRYKVFILLPAATFVLVFVIGVGVAHGAGIWSIALDMMVAATALQLGYAGGSAFAAARKRRKL
Ga0213878_100459122	3300021444	Bulk Soil	LLLTLTVVTLLGGAVLGLRYKVLILLPAATFVLVFVIGVDVARGAGIWRIALDMVVATTALQLGYAGGSAFAAARKRRKLRSGEHIIESDVDSDT
Ga0210392_110087821	3300021475	Soil	MLTLTIVTILCGILCGAVLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWRIALDMMVATTALQLGYAGGSAFAAARALQAPQLIAHHVY
Ga0210402_109511541	3300021478	Soil	LRRGSVYPTKDTRISEDKEQHPYSGARLLLILTVVTILGGAVLGLRYKVFILLPAATFVLVFVIGVGVAHGAGIWSIALDMMVAATALQLGYAGGSAFAAARKRRKLRSGEHIIEADVNSDT
Ga0210410_113647472	3300021479	Soil	RNIKSSSLITRERGCMLTLTIVTILVGAVLGLRYKVFTLLPAVMFVLAFVIGVDVARGAGIWRIALDMMVATTALQLGYAGGSAFAAARERRKLHSGEHTT
Ga0126371_100330081	3300021560	Tropical Forest Soil	LLTLTIVTVLGGAVLGLRYKVFILLPAATFVLVFVIGVGVARGAGIWRIALEMMVAMTALQLGYAGGSAFTAARKRCKLRRDEHITQEDVNSGT
Ga0242660_11334131	3300022531	Soil	RGRGCMLTLTIVTILCGILCGAVLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWRIALDMMVAMTALQLGYAGGSAFAAARERCKNGVTQINQRGAVSAVR
Ga0207699_109976042	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LLLILTVVTMLGGAVLGLRYKVFILLPAATFVLVFVIGVGVAYGAGIWSIALDMMIAAMALQLGYAGGSAFAAAWKRRKLRRGEHSIEADVNSD
Ga0207663_101123781	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	ESAPTPDRLRPTPSLRLAVSISQKTQPHRNIKSSSLIAGERGCMLTLTIVTILVGAVLGLRYKVFTLLPAVTFVLVFVIGVGVAHGADIWSIALDMMVAATALQLGYAGGSAFAAAWKRRKLRRGEHSIEADVNSDI
Ga0207665_100195241	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VLGLRYKVFILLPAATFVLVFVIGVGVAYGAGIWSIALDMMIAAMALQLGYAGGSAFAAAWKRRKLRRGEHSIEADVNSDI
Ga0209213_10687992	3300027383	Forest Soil	HYRGRGCMLTLTIVTILGGAVLGLRYKIFILLPAATFMLVFVIGVDVARGAGIWRIALDMMVAMTALQLGYAGGSAFAAARERCKNGVTHINQRGAVSAVR
Ga0209419_10589871	3300027537	Forest Soil	MLTLTIVTILGGAVLGLRYKIFILLPAAMFMLVFVIGVDVARGAGIWRIALDMMVAMTALQLGYAGGSAFAAARERCKNGVTHINQRGAVSAVR
Ga0209527_10065682	3300027583	Forest Soil	MLTLTIVTILCGILCGAVLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWGIALDMMVATTAMQLGYAGVSAFAAARKRCKNGVTHINQRGALSAVR
Ga0209733_11306641	3300027591	Forest Soil	LGLRYKIFILLPAATFILVFVIGVGVARGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRCKNGVTHINQRGALSAVR
Ga0209331_10012531	3300027603	Forest Soil	MLTLTIVTILVGAVLGLRYKVFILLPAVTFVLVFVIGVGVARGAGIWRIALDMMVATAALQLGYAGGSAFAAARKRRKLHSGEHTTQADVALFASFFALLSERLPTLLAT
Ga0209331_10028374	3300027603	Forest Soil	MLTLTIVTILCGILCGAVLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWRIALDMMVATTALQLGYAGGSAFAAARALQAPQWRAHQVY
Ga0209331_10078084	3300027603	Forest Soil	MLTLTIVTILCGAMLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWGIALDMMVATTAMQLGYAGVSAFAAARKRCKNGVTHINQRGALSAVR
Ga0209331_11041372	3300027603	Forest Soil	MLTLTIVTILCGAVLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWRIALDMMVAMTALQLGYAGGSAFAAARERCKNGVTHINQRGA
Ga0209528_10116602	3300027610	Forest Soil	MLTLTIVTILCGAVLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWRIALDMMVAMTALQLGYAGGSAFAAARERCKNGVTHINQRGAVSAVR
Ga0209528_10527392	3300027610	Forest Soil	LYMLTLTIVTILCGAMLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWGIALDMMVATTAMQLGYAGVSAFAAARKRCKNGVTHINQRGALSAVR
Ga0209217_11324621	3300027651	Forest Soil	RYKIFILLPAATFMLVFVIGVGVARGAGIWGIALDMMVATTALQLGYAGVSAFAAARKRCKNGVTHINQRGALSAVR
Ga0209328_100858262	3300027727	Forest Soil	MLTLTIVTILCGAVLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWRIALDMMVTMTALQLGYAGGSAFAAARERCKNGVTHINQRGAVSAVR
Ga0208989_101284361	3300027738	Forest Soil	MLTLTIVTILCGAVLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWRIALDMMVAMTALQLGYAGVSAFAAARERCKWS
Ga0209488_106400761	3300027903	Vadose Zone Soil	MLTLTIVTILGGAVLGLRYKIFILLAAAMFMLVFVIGVDVARGAGIWRIALDMMVAMTALQLGYAGGSAFAAARERCKNGVTHINQRGAVSAVRFSWIRAPDTRPKYHLL
Ga0209526_100688043	3300028047	Forest Soil	MLTLTIVTILCGAMLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWGIALDMMVATTALQLGYAGVSAFAAARKRCKNGVTHINQRGALSAVR
Ga0209526_101150834	3300028047	Forest Soil	MLTLTIVTILVGAVLGLRYKVFILLPAVTFVLVFVIGVGVARGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLHSGEHTT
Ga0209526_101602771	3300028047	Forest Soil	MLTLTIVTILCGILCGAVLGLRYKIFILLPAATFMLVFVIGVGVARGAGIWRIALDMMVATTALQLGYAGGSAFAAARA
Ga0307302_101049402	3300028814	Soil	MLTHTVVAMLSGAVLGLRYKVLILAPAIMFALVFVVGLAREAGIWWLALDMVVVTTALQLGYL
Ga0222749_101254812	3300029636	Soil	MLTLTIVTILVGAVLGLRYKVFTLLPAVMFVLAFVIGVDVARGAGIWRIALDMMVATTALQLGYAGGSAFAAARERRKLHSGEHTT
Ga0318516_101288363	3300031543	Soil	LLLTLTIVTVLGGAGLGLRYKVFILLPAATFVLVFVIGVGVARGAGIWRIALEMMVAMTALQLGYAGGSAFTAARQRCKLRRDEHITQEDVNSGT
Ga0310915_101374021	3300031573	Soil	MLTLTIVTMLGGALLGLRYKVFILLPASTSVLVCVIGIGVARGAGIWRIAPDVIVATTALQLGYVGGSAFAAVRERRKLHRGEHTTQADVALFASFFALLGEQLPTLLAT
Ga0310915_104156621	3300031573	Soil	LLTLTIVTIVGGAVLGLRYKVFILLAVATFVLVFVIGVGVAQGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRSGEHITQADVNSGT
Ga0306917_113340791	3300031719	Soil	SHKRHKNVARKEQHPHSGARLLLTLTIVTIVGGAVLGLRYKVFILLAVATFVLVFVIGVGVAQGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRSGEHITQADVNSGT
Ga0318554_106510131	3300031765	Soil	LLLTLTIVTVLGGAGLGLRYKVFILLPAATFVLVFVIGVGVARGAGIWRIALEMMVAMTALQLGYAGGSAFTAARQRCKLRRDEHITQEDVNSGTR
Ga0318547_103006761	3300031781	Soil	MLTLTIVTMLGGALLGLRYKVFILLPASTSVLVCVIGIGVARGAGIWRIAPDVIVATTALQLGYVGGSAFAAVRERRKLHRGEHTTQAD
Ga0318547_103979453	3300031781	Soil	LLTLTIVTIVGGAVLGLRYKVFILLAVATFVLVFVIGVGVAQGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRSAEHITQADVNSGT
Ga0318557_104170411	3300031795	Soil	LLLTLTIVTVLGGAGLGLRYKVFILLPAATFVLVFVIGVGVARGAGIWRIALEMMVAMTALQLGYAGGSAFTAARQRCKLRRDEHITQEDVNS
Ga0310917_100899704	3300031833	Soil	LLLTLTIVTIVGGAVLGLRYKVFILLAVATFVLVFVIGVGVAQGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRSGEHITQADVNSGT
Ga0306919_107137742	3300031879	Soil	LLLTLTIVTIVGGAVLGLRYKVFILLAVATFVLVFVIGVGVAQGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRSAEHITQADVNSGT
Ga0318520_110881541	3300031897	Soil	MLTLTIVTMLGGALLGLRYKVFILLPASTSVLVCVIGIGVARGAGIWRIAPDVIVATTALQLGYVGGSAFAAVRERRKLHRG
Ga0310916_107404921	3300031942	Soil	TIVTMLGGALLGLRYKVFILLPASTSVLVCVIGIGVARGAGIWRIAPDVIVATTALQLGYVGGSAFAAVRERRKLHRGEHTTQADVALFASFFALLGEQLPTLLAT
Ga0310913_105598032	3300031945	Soil	LTLTIVTIVGGAVLGLRYKVFILLAVATFVLVFVIGVGVAQGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRSGEHITQADVNSGT
Ga0310909_101010371	3300031947	Soil	DTRMFEDKEQHPHSGARLLLTLTIVTIVGGAVLGLRYKVFILLAVATFVLVFVIGVGVAQGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRSGEHITQADVNSGT
Ga0306926_1001538813	3300031954	Soil	LGLRYKVFILLPAATFVLVFVIGVGVARGAGIWRIALEMMVAMTALQLGYAGGSAFTAARQRCKLRRDEHITQEDVNSGT
Ga0306926_101499615	3300031954	Soil	VLGLRYKVFILLAVATFVLVFVIGVGVAQGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRSGEHITQADVNSGT
Ga0310911_106952362	3300032035	Soil	LLLTLTIVTIVGGAVLGLRYKVFILLAVATFVLVFVIGVGVAQGAGIWRIALDMMVATTALQLGYAGGS
Ga0318533_101032754	3300032059	Soil	MLTLTIVTMLGGALLGLRYKVFILLPASTSVLVCVIGIGVARGAGIWRIAPDVIVATTALQLGYVGGSAFAAVRE
Ga0318513_104308182	3300032065	Soil	LLLTLTIVTVLGGAGLGLRYKVFILLPAATFVLVFVIGVGVARGAGIWRIALEMMVAMTALQLGYAGGSAF
Ga0318514_107496231	3300032066	Soil	LLLTLTIVTIVGGAVLGLRYKVFILLAVATFVLVFVIGVGVAQGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRSGEHITQADVN
Ga0306924_110973142	3300032076	Soil	YKVFILLAVATFVLVFVIGVGVAQGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRSGEHITQADVNSGT
Ga0318577_105590601	3300032091	Soil	RYKVFILLAVATFVLVFVIGVGVAQGAGIWRIALDMMVATTALQLGYAGGSAFAAARKRRKLRSGEHITQADVNSGT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089279

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences