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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F089288 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 109 |
| Average Sequence Length | 65 residues |
| Representative Sequence | MTLEQIKDEIRSLRSSERIELYKWLDYGVVADYGVATDFCPRIGVDRSLEIRHAIEQKFPKSH |
| Number of Associated Samples | 87 |
| Number of Associated Scaffolds | 109 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 85.32 % |
| % of genes near scaffold ends (potentially truncated) | 26.61 % |
| % of genes from short scaffolds (< 2000 bps) | 77.06 % |
| Associated GOLD sequencing projects | 78 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (56.881 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.596 % of family members) |
| Environment Ontology (ENVO) | Unclassified (24.771 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (63.303 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 65.08% β-sheet: 0.00% Coil/Unstructured: 34.92% | Feature Viewer |
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| Powered by Feature Viewer | |||||
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| Pfam ID | Name | % Frequency in 109 Family Scaffolds |
|---|---|---|
| PF04041 | Glyco_hydro_130 | 26.61 |
| PF02735 | Ku | 3.67 |
| PF01850 | PIN | 1.83 |
| PF00939 | Na_sulph_symp | 1.83 |
| PF07167 | PhaC_N | 0.92 |
| PF13610 | DDE_Tnp_IS240 | 0.92 |
| PF04430 | DUF498 | 0.92 |
| PF01494 | FAD_binding_3 | 0.92 |
| PF04986 | Y2_Tnp | 0.92 |
| PF01740 | STAS | 0.92 |
| PF06808 | DctM | 0.92 |
| PF01638 | HxlR | 0.92 |
| PF14534 | DUF4440 | 0.92 |
| PF01526 | DDE_Tnp_Tn3 | 0.92 |
| PF12838 | Fer4_7 | 0.92 |
| PF06863 | DUF1254 | 0.92 |
| PF01568 | Molydop_binding | 0.92 |
| PF02913 | FAD-oxidase_C | 0.92 |
| PF02894 | GFO_IDH_MocA_C | 0.92 |
| COG ID | Name | Functional Category | % Frequency in 109 Family Scaffolds |
|---|---|---|---|
| COG2152 | Predicted glycosyl hydrolase, GH43/DUF377 family | Carbohydrate transport and metabolism [G] | 26.61 |
| COG1273 | Non-homologous end joining protein Ku, dsDNA break repair | Replication, recombination and repair [L] | 3.67 |
| COG0471 | Di- and tricarboxylate antiporter | Carbohydrate transport and metabolism [G] | 1.83 |
| COG0654 | 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases | Energy production and conversion [C] | 1.83 |
| COG1055 | Na+/H+ antiporter NhaD or related arsenite permease | Inorganic ion transport and metabolism [P] | 1.83 |
| COG0277 | FAD/FMN-containing lactate dehydrogenase/glycolate oxidase | Energy production and conversion [C] | 0.92 |
| COG0578 | Glycerol-3-phosphate dehydrogenase | Energy production and conversion [C] | 0.92 |
| COG0644 | Dehydrogenase (flavoprotein) | Energy production and conversion [C] | 0.92 |
| COG0665 | Glycine/D-amino acid oxidase (deaminating) | Amino acid transport and metabolism [E] | 0.92 |
| COG0673 | Predicted dehydrogenase | General function prediction only [R] | 0.92 |
| COG1504 | Uncharacterized conserved protein, DUF498 domain | Function unknown [S] | 0.92 |
| COG1733 | DNA-binding transcriptional regulator, HxlR family | Transcription [K] | 0.92 |
| COG3243 | Poly-beta-hydroxybutyrate synthase | Lipid transport and metabolism [I] | 0.92 |
| COG3737 | Uncharacterized protein, contains Mth938-like domain | Function unknown [S] | 0.92 |
| COG4644 | Transposase and inactivated derivatives, TnpA family | Mobilome: prophages, transposons [X] | 0.92 |
| COG5361 | Uncharacterized conserved protein | Mobilome: prophages, transposons [X] | 0.92 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 56.88 % |
| All Organisms | root | All Organisms | 43.12 % |
| Visualization |
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| Habitat | Taxonomy | Distribution |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 15.60% |
| Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 11.93% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 11.93% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 10.09% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 8.26% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 6.42% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 5.50% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 4.59% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 4.59% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 3.67% |
| Iron-Sulfur Acid Spring | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring | 2.75% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 2.75% |
| Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil | 2.75% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.83% |
| Bog Forest Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil | 1.83% |
| Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 0.92% |
| Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil | 0.92% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.92% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.92% |
| Simulated | Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated | 0.92% |
| Boreal Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil | 0.92% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2166559005 | Simulated microbial communities from Lyon, France | Engineered | Open in IMG/M |
| 2170459007 | Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm | Environmental | Open in IMG/M |
| 2170459009 | Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm | Environmental | Open in IMG/M |
| 2189573000 | Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms) | Environmental | Open in IMG/M |
| 2209111022 | Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment | Environmental | Open in IMG/M |
| 3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300000789 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300001593 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 | Environmental | Open in IMG/M |
| 3300002245 | Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027) | Environmental | Open in IMG/M |
| 3300003219 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 | Environmental | Open in IMG/M |
| 3300004082 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3 | Environmental | Open in IMG/M |
| 3300004468 | Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 74 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Environmental | Open in IMG/M |
| 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Environmental | Open in IMG/M |
| 3300006041 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 | Environmental | Open in IMG/M |
| 3300006174 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014 | Environmental | Open in IMG/M |
| 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
| 3300006176 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 | Environmental | Open in IMG/M |
| 3300006893 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG | Environmental | Open in IMG/M |
| 3300007258 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 | Environmental | Open in IMG/M |
| 3300009088 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG | Environmental | Open in IMG/M |
| 3300009090 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG | Environmental | Open in IMG/M |
| 3300009524 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG | Environmental | Open in IMG/M |
| 3300009672 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG | Environmental | Open in IMG/M |
| 3300010154 | Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010341 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2 | Environmental | Open in IMG/M |
| 3300010343 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1 | Environmental | Open in IMG/M |
| 3300010379 | Sb_50d combined assembly | Environmental | Open in IMG/M |
| 3300010865 | Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012202 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG | Environmental | Open in IMG/M |
| 3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
| 3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
| 3300012685 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG | Environmental | Open in IMG/M |
| 3300012917 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG | Environmental | Open in IMG/M |
| 3300012922 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG | Environmental | Open in IMG/M |
| 3300012923 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG | Environmental | Open in IMG/M |
| 3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
| 3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
| 3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
| 3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
| 3300012987 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300020583 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M | Environmental | Open in IMG/M |
| 3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
| 3300021171 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M | Environmental | Open in IMG/M |
| 3300021178 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M | Environmental | Open in IMG/M |
| 3300021407 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O | Environmental | Open in IMG/M |
| 3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
| 3300022557 | Paint Pots_combined assembly | Environmental | Open in IMG/M |
| 3300024288 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal | Environmental | Open in IMG/M |
| 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026489 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A | Environmental | Open in IMG/M |
| 3300026514 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B | Environmental | Open in IMG/M |
| 3300026555 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
| 3300026557 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal | Environmental | Open in IMG/M |
| 3300026920 | Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN397 (SPAdes) | Environmental | Open in IMG/M |
| 3300027535 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027565 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027603 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027629 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027651 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027660 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027698 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027727 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027812 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027824 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027829 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027889 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes) | Environmental | Open in IMG/M |
| 3300027894 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes) | Environmental | Open in IMG/M |
| 3300027903 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes) | Environmental | Open in IMG/M |
| 3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300028536 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300028906 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2) | Environmental | Open in IMG/M |
| 3300031128 | Oak Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031469 | Fir Spring Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031474 | Fir Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031545 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26 | Environmental | Open in IMG/M |
| 3300031573 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111 | Environmental | Open in IMG/M |
| 3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
| 3300031719 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2) | Environmental | Open in IMG/M |
| 3300031890 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2) | Environmental | Open in IMG/M |
| 3300031946 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172 | Environmental | Open in IMG/M |
| 3300032160 | Sb_50d combined assembly (MetaSPAdes) | Environmental | Open in IMG/M |
| 3300032955 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| cont_0939.00000460 | 2166559005 | Simulated | MTLEQIKDEIRSLRSSERIELYKWLDYGVVADYGVATDFCPRIGVDRSLEIRHSIEQSSQIHTNSKKI |
| L02_06849930 | 2170459007 | Grass Soil | MTLEQIKDEIRSLKSSERIELYRWLDYDVATDFCSRIGADRSLEIRHAIETKYEGHRQSALTKGS |
| F47_06681480 | 2170459009 | Grass Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVVADYGVATGFCPRIGTDRSLEIRHAIDQKFPKSH |
| N55_06037620 | 2189573000 | Grass Soil | VEKSIITLEQIKDEIRSLRSSERIELYKWLDHGVVADYGVATDFCPRIGVDRSLEIRHSIEQSSQIHTNSKKI |
| 2222071640 | 2209111022 | Grass Soil | VEKSMITLEQIKGQIRSLRSSERIELYKWLDHGVVADFCPRIGVDAHWRSVILSNKVSQIHSNSKKIQPR |
| INPhiseqgaiiFebDRAFT_1005700763 | 3300000364 | Soil | IKDEIRSLRSSERIELYKWLEYVVVADYGVAADFCPRIGMDRXLEIRHAIEQKFRKSH* |
| INPhiseqgaiiFebDRAFT_1005723292 | 3300000364 | Soil | VEKSIITLEQIKDEIRSLRSSERIELYKWLEYVVVADYGVAADFCPRIGMDRSLKIRHAIEQKFPKSH* |
| JGI1027J11758_130475981 | 3300000789 | Soil | MTLEQIKDEIRSLRSSERIELYKWLEYVVVADYGVAADFCPRIGMDRTLEIRHAMEQKFRKSH* |
| JGI1027J12803_1039043472 | 3300000955 | Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVATDFCLRIGVDRSLEIRHAIEQKFPKSH* |
| JGI1027J12803_1077768492 | 3300000955 | Soil | MTLEQIKDEIRSLRSSERIELYKWLEYVVVADYGVAADFCPRIGMDRSLEIRHAIEQKFRKSH* |
| JGI12635J15846_101447181 | 3300001593 | Forest Soil | QIKDEIRSLRSSEKIEPYKWLDYGAVADYGVATDFCPRIGVERSLEIRHAIEQKFPKSH* |
| JGI12635J15846_103230492 | 3300001593 | Forest Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVVADYGVATDFCPRIGMDRSLKIRHAIEQKFPKPR* |
| JGIcombinedJ26739_1003408011 | 3300002245 | Forest Soil | MTLEQIKDEIRSLRSSERIELYKWLXYGVVAHYGVATDFCPRIGMDRSLKIRHAIEQKFPKSH* |
| JGIcombinedJ26739_1010249512 | 3300002245 | Forest Soil | MTLEQIKDEIRSLRSNERIELYKWLDYGVVADYGVATDFCPRIGVDRSLEIRHAIEQKFPKSH* |
| JGIcombinedJ26739_1014073722 | 3300002245 | Forest Soil | IMTLEQIKDEIRSLRSSERIELYKWLDYGVAADYGVATDFCPRIGTDRSLKIRHAIEQKFSKSH* |
| JGI26341J46601_100131563 | 3300003219 | Bog Forest Soil | MTLEQIKVEIRSLRSSERIELYKWLDYSVVADYAVATDFCPRIGVDRSVEIRHAIEQKFPKSH* |
| JGI26341J46601_100556991 | 3300003219 | Bog Forest Soil | MTLEQIKDEIRSLKSSERMELYIWLDYDVATDFCSRIGADRSLEIRHAIEQNMKDIVRAP |
| JGI26341J46601_101348542 | 3300003219 | Bog Forest Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVVADYGVATDFCPRIGVDRSLEIRHSIEQKFPKSH* |
| Ga0062384_1008801812 | 3300004082 | Bog Forest Soil | VEKSIITLEQIKDEIRSLRSSERIELYKWLDHGVVADYGVATDFCPRIGVDRSLEIRHSIEQSSQIHTNSKKI* |
| Ga0068977_12444871 | 3300004468 | Peatlands Soil | MTLEQIKDEIRSLKSSERIELYIWLDYDVATDFCSRIGAERSLEIRHAIEQNMKDTVRAP |
| Ga0070709_112289692 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | TLEQIKDEIRSLRSSERIELYKWLDHGVVADYGVATDFCPRIGVDRSLEILHAIEQSSQIHSNSKKIQPR* |
| Ga0070710_111325362 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | VEKSIITLEQIKDEIRSLRSSERIELYKWLDHGVVADYGVATDFCPRIGVDRSLEIRHAIEQSSQIHSNSKKIQPR* |
| Ga0075023_1006060281 | 3300006041 | Watersheds | MTLEQIKDEIRSLRSSERIELYKWLDYGVATDFCPRIGMDRSLEIRHAIEQKFPKSH* |
| Ga0075014_1008842442 | 3300006174 | Watersheds | MTLEQIKDEIRSLRSSERIELYKWLDYGMATDFCPRIGMDRSLEIRHAIEQSFQGHTNSEKKISLV* |
| Ga0070712_1008055864 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | TLEQIKDEIRSLRSSERIELYKWLDHGVVADYGVATDFCPRIGVDRSLEIRHAIEQSSQIHSNSKKIQPR* |
| Ga0070765_1013885581 | 3300006176 | Soil | VEKSIITLEQIKDEIRSLRSSERIELYKWLDYGVVADYGVATDFCPRIGVDRSLEIRHAIEQKFPKSH* |
| Ga0073928_101218595 | 3300006893 | Iron-Sulfur Acid Spring | MTLEQIKDEIRSLRSSEKIEPYKWLDYGAVADYGVATDFCPRIGVERSLEIRHAIEQKFPKSH* |
| Ga0073928_101967072 | 3300006893 | Iron-Sulfur Acid Spring | MTLEQIKDEIRSLRSSERIELYKWLDYGVVADYGVATDFCPRIGVDWSLEIRHAIEQKFPKSH* |
| Ga0099793_105285252 | 3300007258 | Vadose Zone Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGLATDFCLRIGVDRSLEIRHAIEQKFPKSH* |
| Ga0099830_110370182 | 3300009088 | Vadose Zone Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVVADYGVATDFCPRIGVDRSLEIRHAIEQKFPKSH* |
| Ga0099827_112363061 | 3300009090 | Vadose Zone Soil | MTLEQIKDEIRSLSSSERIELYKWLDHGVVADFCPRIGVNRSLEIRNSIEQSSQI |
| Ga0116225_11267051 | 3300009524 | Peatlands Soil | MTLEQIKDEIRSLRSSEKIEPYKWLDYGVVADYGVATDFCPRIGVDRSLEIRHSIEQSSQSHTNSKKI* |
| Ga0116215_10735701 | 3300009672 | Peatlands Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVVADYGVATDFCPRIGVDRSLEIRHSIEQSSQSHTNSKKI* |
| Ga0127503_100427181 | 3300010154 | Soil | MTLEQIKDEIRSLSSSERIELYKWLDHGVVADYGVATDFYPRIGMDRSLEIRHAIEQMFPKTH* |
| Ga0074045_100148421 | 3300010341 | Bog Forest Soil | IKDEIRSLKSSERIELYIWLDYDVATDFCSRIGADRSLEIRHAIEQNMKDTVRAP* |
| Ga0074044_105198551 | 3300010343 | Bog Forest Soil | VEKSIITLEQIKDEIRSLRSSERIELYKWLDYSVVADYVVATDFWARIGVDRPVEIRHGIEQKFSK |
| Ga0136449_1008113501 | 3300010379 | Peatlands Soil | MTLEQIKDEIRSLKSSERMELYIWLDYDVATDFCSRIGADRSLEIRHAIEQNMKDTVRAP |
| Ga0136449_1019250073 | 3300010379 | Peatlands Soil | GMTLEQIKDEIRSLKSSERIELYRWLDYDVATDFRSRIGADRSLEIRHSIEQNMKDTVRAP* |
| Ga0126346_13474931 | 3300010865 | Boreal Forest Soil | LEKGIITLEQIKDEIRSLRSSERIELYKWLDHGVVADFCPRIGVNRSLEIRNSIEQSSQIHTNSKKIQPR* |
| Ga0137363_102152631 | 3300012202 | Vadose Zone Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVVPDYGVATDFCPRIGVDRSLEIRHAIEQKFPKSH* |
| Ga0137363_118071432 | 3300012202 | Vadose Zone Soil | MTLEQIKDEIRSLRSSERIELYRWLDYGVVADYGVATDFCPRIGMDRSLEIRHAIEQNITLPIP* |
| Ga0137362_101317492 | 3300012205 | Vadose Zone Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVATDFCPRIGMDRSLEIRHSIEQSSQSHTNSKKI* |
| Ga0137361_112844241 | 3300012362 | Vadose Zone Soil | MTLAQIENEIRNLRPIERIELYKWLDHVVVADYDVETSFCLRLGLDRSLEIRHAIDQKMKINARS |
| Ga0137361_118981682 | 3300012362 | Vadose Zone Soil | MTLEQIKDEIRSLRSSERIELYRWLDYGVVTDYGVAADFYPRIGMDRSLEIRHAIEQKFPKSH* |
| Ga0137397_110890011 | 3300012685 | Vadose Zone Soil | MTLEQIKDEIRSLRSSERIELYKWLDHGVVADYGVATDFCPRIGVDRSLEIRHSIEQSSQIHTNSKKI* |
| Ga0137395_108315381 | 3300012917 | Vadose Zone Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVVADYGVATDFCPRIGVDRSLEIRHAMGQKGPKSH* |
| Ga0137394_106148992 | 3300012922 | Vadose Zone Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVATDFCPRIGVDRSLEIRHSIEQSSQIHTNSKKI* |
| Ga0137359_109141381 | 3300012923 | Vadose Zone Soil | VEKCIITLEQIKDEIRSLRSSERIELYRWLDYGVVADYGVATDFCLRIGVDRSLEIRHAIEQKFPKSH* |
| Ga0164299_103654141 | 3300012958 | Soil | MTLEQIKDEIRSLRSSERIELYKWLYHGVVADYGVATDCCPRIGVDRSLEIRHSIEQSS |
| Ga0164301_115011671 | 3300012960 | Soil | MTLEQIKDEIRSLRSSERIELYKWLDYVVVADYGVATDFCPRIGVDRSLEIRHSIEQSSQIHTNSKKI* |
| Ga0164302_115936082 | 3300012961 | Soil | VEKSIITLEQIKDEIRSLRSTERIELYKWLDHGVVADYGVATDFCPRIGVDRSLEIRHSIEQSSQIHSNSKKIQPR* |
| Ga0164309_115153472 | 3300012984 | Soil | MTLEQIKDEIRSLRSSERIELYKWLDYVVVADYGVATDFCPRIGMDRSLEIRHAIEQKFPKSH* |
| Ga0164307_114517132 | 3300012987 | Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVVADYGVATDFCPRIGVDRSLEIRHSIEQSSQIHTNSKKN* |
| Ga0132258_126094742 | 3300015371 | Arabidopsis Rhizosphere | VEKSIITLEQIKDEIRSLRSSERIELYKWLDHGVLADYGVATDFCPRIGVDRSLEVRRSIEQGCQINSNSKKIQSW* |
| Ga0210401_114349452 | 3300020583 | Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVVADYGVATDFCPRIGVDRSLEIRHAIEQKFPKSH |
| Ga0210406_105822881 | 3300021168 | Soil | VEKSIITLEQIKDEIRSLRSSERIELYKWLDHGVVADYGVATDFCPRIGVDRSLEIRHSIEQSSQIHSNSKKIQPR |
| Ga0210405_112120331 | 3300021171 | Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVVTDYGVATDFYPRIGMDRSLEIRHAIEQKFPKSH |
| Ga0210408_106114772 | 3300021178 | Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVVADYGVATDFCPRIGMDRSLKIRHAIEQKFPKSH |
| Ga0210383_111952981 | 3300021407 | Soil | MTLEQIKDEIRSLRSSERIELYKWLDYSVVADYAVATDFCPRIGMDRSLEIRHSIEQSFQIHTNSKKI |
| Ga0210394_114250661 | 3300021420 | Soil | PEVERVEKSIITLEQIKDEIRSLRASERIELYKWLDHGVVADYGVATDFCPRIGMDRSLKIRHAIEQKFPKSH |
| Ga0212123_100755956 | 3300022557 | Iron-Sulfur Acid Spring | MTLEQIKDEIRSLRSSEKIEPYKWLDYGAVADYGVATDFCPRIGVERSLEIRHAIEQKFPKSH |
| Ga0179589_105511841 | 3300024288 | Vadose Zone Soil | VEKCIITLEQIKDEIRSLRSSERIELYKWLDHGVVADYGVATDFCPRIGMDRSLEIR |
| Ga0207692_105346912 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | VEKSIITLEQIKDEIRSLRSTERIELYKWLDHGVVADYGVATDFCPRIGVDRSLEIRHAIEQSSQIHSNSKKIQPR |
| Ga0207693_100583274 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | MTLEQIKDEIRSLRSTERIELYKWLDHGVVADYGVATDFCPRIGVDRSLEIRHAIEQSSQIHSNSKKIQPR |
| Ga0257160_10081461 | 3300026489 | Soil | VEKSIITLEQIKDEIRSLRSSERIELYKWLDHGVVADYGVATDFCPRIGVDRSLEIRNSIEQSSQIHTNSKKIQPR |
| Ga0257168_10237702 | 3300026514 | Soil | MDVIMTLEQIKDEIRSLRSSERIELYKWLDYGVVADYGVATDFYPRIGMDRSLEIRHA |
| Ga0179593_10245595 | 3300026555 | Vadose Zone Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVVADCGVATDFCPRIGMDRSLKIRHAIEQKSPKPC |
| Ga0179587_101093191 | 3300026557 | Vadose Zone Soil | VEKCIITLEQIKVEIRSLRSSERIELYKWLDHGVVADYGVATDFCPRIGVDRSLEIRNSIEQSSQIHTNSKKIQPR |
| Ga0208575_10026333 | 3300026920 | Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVATDFCPRIGMDRSLEIRHAIEQKFPKSH |
| Ga0209734_11011841 | 3300027535 | Forest Soil | MTLEQIKDEIRSLRSSERIELYKWLDHVVVADYDVETSFCLRLGLDRSLEIRHAIDQKM |
| Ga0209219_10077312 | 3300027565 | Forest Soil | MTLEQIKDEIRSLRSSERIELYKWFDYGVATDFCPRIGVDRSLEIRHAIEQKFPKSH |
| Ga0209331_10060454 | 3300027603 | Forest Soil | MTLEQIKDEIRSLRSNERIELYKWLDYGVVADYGVATDFCPRIGVDRSLEIRHAIEQKFPKSH |
| Ga0209422_10079952 | 3300027629 | Forest Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVVADYGVATDFCPRIGMDRSLKIRHAIEQKFPKPR |
| Ga0209217_11049771 | 3300027651 | Forest Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVATDFCPRIGVDRSLEIRHAIEQKFPKSH |
| Ga0209736_10118902 | 3300027660 | Forest Soil | MTLEQIKDEIRSLRSSERIELYKWLDYVVVADYVVAADFCPRIGMYRSLEIRHAIEQKFRKSH |
| Ga0209446_10026421 | 3300027698 | Bog Forest Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVVADYGVATDFCPRIGVDRSLEIRHSIEQKFPKSH |
| Ga0209328_100406741 | 3300027727 | Forest Soil | MTLEQIKDEIRSLRSNERIELYKWLDYGVVADYGVATDFCPRIGVDRSLEIRHAIEQKFSKSH |
| Ga0209656_100080472 | 3300027812 | Bog Forest Soil | MTLEQIKVEIRSLRSSERIELYKWLDYSVVADYAVATDFCPRIGVDRSVEIRHAIEQKFPKSH |
| Ga0209656_100387422 | 3300027812 | Bog Forest Soil | MTLTLEQIKDGIRNLRPSERIELYRWFDYVVVVDYPVATNFCSRIGMDRSLKIHDAIWNK |
| Ga0209656_100736323 | 3300027812 | Bog Forest Soil | MTLEQIKDEIRSLKSSERIELYIWLDYDVATDFCSRIGADRSLEIRHAIEQNMKDTVRAP |
| Ga0209656_101082021 | 3300027812 | Bog Forest Soil | MTLEQIKDEIRSLKSSERIELYRWLDYDVATDFYSRIGADRSLEIRQAIEHNLKVTARAP |
| Ga0209040_100586641 | 3300027824 | Bog Forest Soil | MTLEQIKDEIRSLRSSEKIEPYKWLDYGVATDFCPRIGVERSLEIRHAIEQKFPKSH |
| Ga0209040_101229263 | 3300027824 | Bog Forest Soil | MTLTLEQIKDGICNLRPSERIELYRWFDYVVVVDYPVATNFCSRIGMDRSLKIHDAIWNK |
| Ga0209040_102268561 | 3300027824 | Bog Forest Soil | TSGEVVMTLEQIKDEIRSLKSSERIELYRWLDYDVATDFYSRIGADRSLEIRQAIEHNLKVTARAP |
| Ga0209773_100284152 | 3300027829 | Bog Forest Soil | VSMSSYSGRFTEVERVEKSIITLEQIKDEIRSLRSSERIELYKWLDHGVVADYGVATDFCPRIGVERSLEIRHSVEQSSQIHTNSKKI |
| Ga0209380_100642621 | 3300027889 | Soil | VEKSIITLEQIKGQIRSLRSSERIELYKWLDYGVVADYGVATDFCPRIGVDRSLEIRHAIEQKFPKSH |
| Ga0209068_106476212 | 3300027894 | Watersheds | MTLEQIKDEIRSLRSSERIELYKWLDHGVVADYGVATDFCPRIGVDRSLQIRHSIEQSSQIHSNSK |
| Ga0209488_104143681 | 3300027903 | Vadose Zone Soil | MTLEQIKDEIRSLRSSERIDLYKWLDYMIVADYGVATDFCPRIGMDRSLEIRHAIEQSSQGDTNSEKKISLV |
| Ga0209526_104143761 | 3300028047 | Forest Soil | KDEIRSLRSSERIELYKWLDYGVVAHYGVATDFCPRIGMDRSLKIRHAIEQKFPKSH |
| Ga0137415_100627232 | 3300028536 | Vadose Zone Soil | MTLEQIQDEIRSLRSSERIELYKWLDYGVATDFCLRIGVDRSLEIRHAIEQKFPKSH |
| Ga0308309_113676201 | 3300028906 | Soil | RSLRSSERIELYKWLDYGVVADYGVATDFCPRIGVDRSLEIRHSIEQSSKIHTNSKKI |
| Ga0170823_159443211 | 3300031128 | Forest Soil | VERVEKSIITLEQIKDEIRSLRSSERIELYKWLDHGVVADYGVATDFCPRIGVDRSLEIRHSIEQSSQIHTNSKKI |
| Ga0170824_1074020991 | 3300031231 | Forest Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVVADYGVATDFCPRIGVDRSLEIRRAIEQKFPSHTNSKKI |
| Ga0170824_1109291531 | 3300031231 | Forest Soil | MTLEQIKDEIRNLKSSERIELYIWLDYDVATDFCSRIGADRSLEIRHAIEQNMKDTVRAP |
| Ga0170824_1203822391 | 3300031231 | Forest Soil | TSGEVIMTLEQIKDEIRSLSSSERIELYKWLDYGVVADYGVATDFCPRIGMDRSLEIRHAIEQKFPKSH |
| Ga0170819_126975091 | 3300031469 | Forest Soil | MTLEQIKDEIRSLKSSERMELYVWLDYDVATDFCSRIGADRSLEIRHAIEQNMKDTVRAP |
| Ga0170818_1132126441 | 3300031474 | Forest Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVVADYGVATDFCPRIGVDRSLEIRHSIEQSSQIHTNK |
| Ga0318541_107497881 | 3300031545 | Soil | DQIKDEIRSLRSSERIELYRWLDYGVVADYGVATNFCSRIGVDRSLEIRHAIEQNIPGSGGGTRTAPESEISK |
| Ga0310915_105036071 | 3300031573 | Soil | MTLEQIKDEIRSLRSSERIELYRWLDYGVVADYGVATNFCSRIGVDRSLEIRHAIEQNIPGSGGGTRTAPEV |
| Ga0310686_1044860872 | 3300031708 | Soil | VEKSIITLEQIKDEIRSLRSSEKIEPYKWLDYGAVADYGVATDFCPRIGVERSLEIRHAI |
| Ga0310686_1102501736 | 3300031708 | Soil | MTLAQIKDEIRSLRSSERTELYKWLDYGVVADYGVANDFCPRIGVDRSLEIRHAIEQKFPKSP |
| Ga0306917_100380986 | 3300031719 | Soil | MTLEQIKDEIRSLRSSERIELYRWLDYGVVADYGVATNFCSRIGVDRSLEIRHAIEQNIPGSGSGTRTAPESEISK |
| Ga0306925_101293811 | 3300031890 | Soil | MTLEQIKDEIRSLRSSERIELYRWLDYGVVADYGVATNFCSRIGVDRSLEIRHAIEQNIPGSGGGTRTAPESEISK |
| Ga0310910_103116441 | 3300031946 | Soil | IKDEIRSLRSSERIELYRWLDYGVVADYGVATNFCSRIGVDRSLEIRHAIEQNIPGSGGGTRTAPEV |
| Ga0311301_101078935 | 3300032160 | Peatlands Soil | MTLEQIKDEIRSLRSSERIELYKWLDYGVVADYGVATDFCPRIGVDRSLEIRHSIEQSSQSHTNSKKI |
| Ga0311301_104311433 | 3300032160 | Peatlands Soil | MTLEQIKDEIRSLKSSERIELYRWLDYDVATDFRSRIGADRSLEIRHSIEQNMKDTVRAP |
| Ga0311301_104870962 | 3300032160 | Peatlands Soil | MTLEQIKDEIRSLKSSERIELYIWLDYDVATDFCSRIGADRALEIRHAIEQNMKDTVRAP |
| Ga0311301_107725224 | 3300032160 | Peatlands Soil | MTLEQIKDEIRSLRSSEKIEPYKWLDYGVVADYGVATDFCPRIGVERSLEIRHAIEQKFPKSH |
| Ga0335076_100591271 | 3300032955 | Soil | MTLQQIKDEIRSLRSSERIELYKWLDYGVATDFCPRIGVDRSLEIRHSIEQKFPKSEDLASPKLNDA |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |