Metagenome / Metatranscriptome Family F089351

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089351
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	70 residues
Representative Sequence	MRATTWAILGSLAINLMLGLVIATVFSVSPPAMAAESPACSTHAAAPARQAPAQPARSGHRYIVAVRMGWAM
Number of Associated Samples	81
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.90 %
% of genes near scaffold ends (potentially truncated)	30.28 %
% of genes from short scaffolds (< 2000 bps)	80.73 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.394 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.780 % of family members)
Environment Ontology (ENVO)	Unclassified (42.202 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.706 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 27.00% β-sheet: 0.00% Coil/Unstructured: 73.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF08857	ParBc_2	24.77
PF01266	DAO	9.17
PF01925	TauE	6.42
PF08439	Peptidase_M3_N	0.92
PF06433	Me-amine-dh_H	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG4318	Uncharacterized conserved protein	Function unknown [S]	24.77
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	6.42
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.39 %
Unclassified	root	N/A	26.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.39 %
Unclassified	root	N/A	26.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.39 %
Unclassified	root	N/A	26.61 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	69.72 %
Unclassified	root	N/A	26.61 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	44.04 %
Unclassified	root	N/A	26.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.59 %

Name	Rank	Taxonomy	Distribution
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	41.28 %
Unclassified	root	N/A	26.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.59 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	41.28 %
Unclassified	root	N/A	26.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.59 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16676666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1607	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105790309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1697	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105791762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1802	Open in IMG/M
3300003505\|JGIcombinedJ51221_10317871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	633	Open in IMG/M
3300004633\|Ga0066395_10045262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1921	Open in IMG/M
3300005332\|Ga0066388_100907518	Not Available	1458	Open in IMG/M
3300005355\|Ga0070671_100385292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1198	Open in IMG/M
3300005355\|Ga0070671_101163728	Not Available	678	Open in IMG/M
3300005363\|Ga0008090_10006103	Not Available	504	Open in IMG/M
3300005363\|Ga0008090_15242458	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300005437\|Ga0070710_10972617	Not Available	617	Open in IMG/M
3300005526\|Ga0073909_10117185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1074	Open in IMG/M
3300005764\|Ga0066903_100637999	Not Available	1858	Open in IMG/M
3300005764\|Ga0066903_102860964	Not Available	936	Open in IMG/M
3300006173\|Ga0070716_100164341	Not Available	1442	Open in IMG/M
3300009792\|Ga0126374_10049100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2127	Open in IMG/M
3300009792\|Ga0126374_10716549	Not Available	754	Open in IMG/M
3300010046\|Ga0126384_12041140	Not Available	549	Open in IMG/M
3300010046\|Ga0126384_12274423	Not Available	523	Open in IMG/M
3300010047\|Ga0126382_10189092	Not Available	1453	Open in IMG/M
3300010048\|Ga0126373_10151019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2207	Open in IMG/M
3300010048\|Ga0126373_10474102	All Organisms → cellular organisms → Bacteria → Proteobacteria	1290	Open in IMG/M
3300010048\|Ga0126373_11554277	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300010048\|Ga0126373_11877048	Not Available	662	Open in IMG/M
3300010358\|Ga0126370_11733111	Not Available	602	Open in IMG/M
3300010359\|Ga0126376_13281576	Not Available	500	Open in IMG/M
3300010360\|Ga0126372_10085608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2311	Open in IMG/M
3300010361\|Ga0126378_10052752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3799	Open in IMG/M
3300010376\|Ga0126381_100006037	All Organisms → cellular organisms → Bacteria → Proteobacteria	13377	Open in IMG/M
3300010376\|Ga0126381_100248694	All Organisms → cellular organisms → Bacteria → Proteobacteria	2408	Open in IMG/M
3300010376\|Ga0126381_101012822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1199	Open in IMG/M
3300010376\|Ga0126381_101443578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	994	Open in IMG/M
3300010376\|Ga0126381_102534366	Not Available	735	Open in IMG/M
3300010401\|Ga0134121_10035105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4076	Open in IMG/M
3300015371\|Ga0132258_10269851	All Organisms → cellular organisms → Bacteria → Proteobacteria	4170	Open in IMG/M
3300015374\|Ga0132255_100171500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3047	Open in IMG/M
3300016270\|Ga0182036_10986101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	694	Open in IMG/M
3300016294\|Ga0182041_11244043	All Organisms → cellular organisms → Bacteria → Proteobacteria	680	Open in IMG/M
3300016319\|Ga0182033_11743173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	565	Open in IMG/M
3300016357\|Ga0182032_11924072	Not Available	518	Open in IMG/M
3300016387\|Ga0182040_11795161	Not Available	525	Open in IMG/M
3300017927\|Ga0187824_10281635	Not Available	584	Open in IMG/M
3300017937\|Ga0187809_10292053	Not Available	599	Open in IMG/M
3300017959\|Ga0187779_10073653	All Organisms → cellular organisms → Bacteria → Proteobacteria	2021	Open in IMG/M
3300017974\|Ga0187777_10056236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2538	Open in IMG/M
3300017974\|Ga0187777_10448567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	897	Open in IMG/M
3300020579\|Ga0210407_10018796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5131	Open in IMG/M
3300020581\|Ga0210399_10218218	Not Available	1588	Open in IMG/M
3300020581\|Ga0210399_10571719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	936	Open in IMG/M
3300021377\|Ga0213874_10009851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2377	Open in IMG/M
3300021384\|Ga0213876_10532196	Not Available	625	Open in IMG/M
3300021560\|Ga0126371_10076840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3266	Open in IMG/M
3300021560\|Ga0126371_10316442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1690	Open in IMG/M
3300021560\|Ga0126371_10738464	All Organisms → cellular organisms → Bacteria → Proteobacteria	1132	Open in IMG/M
3300021560\|Ga0126371_11309866	Not Available	858	Open in IMG/M
3300021560\|Ga0126371_12839616	Not Available	587	Open in IMG/M
3300027874\|Ga0209465_10247409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	892	Open in IMG/M
3300031446\|Ga0170820_14985746	Not Available	546	Open in IMG/M
3300031474\|Ga0170818_106096763	Not Available	570	Open in IMG/M
3300031543\|Ga0318516_10042480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2449	Open in IMG/M
3300031543\|Ga0318516_10061968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2059	Open in IMG/M
3300031543\|Ga0318516_10391538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	801	Open in IMG/M
3300031544\|Ga0318534_10057891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2180	Open in IMG/M
3300031544\|Ga0318534_10072008	All Organisms → cellular organisms → Bacteria → Proteobacteria	1958	Open in IMG/M
3300031544\|Ga0318534_10124872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1479	Open in IMG/M
3300031546\|Ga0318538_10188293	All Organisms → cellular organisms → Bacteria → Proteobacteria	1100	Open in IMG/M
3300031572\|Ga0318515_10624422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	572	Open in IMG/M
3300031668\|Ga0318542_10173148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1081	Open in IMG/M
3300031680\|Ga0318574_10039843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2425	Open in IMG/M
3300031682\|Ga0318560_10073673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1728	Open in IMG/M
3300031715\|Ga0307476_10732456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	732	Open in IMG/M
3300031716\|Ga0310813_11570707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	614	Open in IMG/M
3300031723\|Ga0318493_10033793	All Organisms → cellular organisms → Bacteria → Proteobacteria	2343	Open in IMG/M
3300031747\|Ga0318502_10075893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1823	Open in IMG/M
3300031751\|Ga0318494_10337354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	871	Open in IMG/M
3300031754\|Ga0307475_10496052	Not Available	980	Open in IMG/M
3300031754\|Ga0307475_10543115	All Organisms → cellular organisms → Bacteria → Proteobacteria	932	Open in IMG/M
3300031765\|Ga0318554_10076537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1861	Open in IMG/M
3300031770\|Ga0318521_10364329	Not Available	858	Open in IMG/M
3300031770\|Ga0318521_10437927	All Organisms → cellular organisms → Bacteria → Proteobacteria	781	Open in IMG/M
3300031781\|Ga0318547_10702299	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300031782\|Ga0318552_10110858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1360	Open in IMG/M
3300031793\|Ga0318548_10037844	All Organisms → cellular organisms → Bacteria → Proteobacteria	2153	Open in IMG/M
3300031795\|Ga0318557_10319752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	713	Open in IMG/M
3300031823\|Ga0307478_10042794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3327	Open in IMG/M
3300031831\|Ga0318564_10050283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1813	Open in IMG/M
3300031832\|Ga0318499_10267475	All Organisms → cellular organisms → Bacteria → Proteobacteria	663	Open in IMG/M
3300031835\|Ga0318517_10426060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	599	Open in IMG/M
3300031893\|Ga0318536_10152573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1174	Open in IMG/M
3300031896\|Ga0318551_10063714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1892	Open in IMG/M
3300031896\|Ga0318551_10907165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	514	Open in IMG/M
3300031897\|Ga0318520_10066790	All Organisms → cellular organisms → Bacteria → Proteobacteria	1940	Open in IMG/M
3300031910\|Ga0306923_11063190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	874	Open in IMG/M
3300031910\|Ga0306923_11328140	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300031942\|Ga0310916_11067193	All Organisms → cellular organisms → Bacteria → Proteobacteria	672	Open in IMG/M
3300031945\|Ga0310913_10620414	All Organisms → cellular organisms → Bacteria → Proteobacteria	766	Open in IMG/M
3300031962\|Ga0307479_10738402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	962	Open in IMG/M
3300032010\|Ga0318569_10212364	Not Available	897	Open in IMG/M
3300032044\|Ga0318558_10425136	All Organisms → cellular organisms → Bacteria → Proteobacteria	662	Open in IMG/M
3300032059\|Ga0318533_10142456	All Organisms → cellular organisms → Bacteria → Proteobacteria	1691	Open in IMG/M
3300032063\|Ga0318504_10339326	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300032067\|Ga0318524_10652394	All Organisms → cellular organisms → Bacteria → Proteobacteria	554	Open in IMG/M
3300032076\|Ga0306924_12501135	Not Available	518	Open in IMG/M
3300032180\|Ga0307471_100409068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1486	Open in IMG/M
3300032261\|Ga0306920_101340125	All Organisms → cellular organisms → Bacteria → Proteobacteria	1028	Open in IMG/M
3300032261\|Ga0306920_101400425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1002	Open in IMG/M
3300032770\|Ga0335085_10567503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1283	Open in IMG/M
3300033158\|Ga0335077_10383970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1513	Open in IMG/M
3300033289\|Ga0310914_10925135	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.50%
Host-Associated	Host-Associated	5.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.66%
Plants	Host-Associated → Plants	5.50%
Aquatic	Environmental → Aquatic	1.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.66%
Freshwater	Environmental → Aquatic → Freshwater	1.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.83%
Roots	Host-Associated → Plants → Roots	1.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.73%
Loam	Environmental → Terrestrial → Soil → Loam	7.34%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.59%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.75%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.83%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.83%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.83%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02310040	2088090014	Soil	MTAWAILGSLVINLMLGLVVAAVFSVSRPATAAESAQCPTHASAPSRQAPGRPARSGQRYIVAVRMGWAMG
INPhiseqgaiiFebDRAFT_1057903092	3300000364	Soil	MRMTTWAILGSLVINLMLALVMASVFSVSLPARATESAQCSTHPATPTRQAPAPPARSGHRYIVAVRMGWAMG*
INPhiseqgaiiFebDRAFT_1057917622	3300000364	Soil	MRMTAWAILGSLVINLMLGLVVAAVFSVSRPATAAESAQCPTHASAPSRQAPGRPARSGQRYIVAVRMGWAMG*
JGIcombinedJ51221_103178711	3300003505	Forest Soil	MRMTTWAILGSLVINLMLALVMASVFSVSLPARATESAQCSTHPAAPTRQTPAPPARSGHRYIVAVRMGWAMG*
Ga0066395_100452622	3300004633	Tropical Forest Soil	MRMTSWAILGSLVINLMLGLVVAAVFSVSRPATAAESAQCPTHASAPSRRAPGQPARSGQRYIVAVRMGWAMG*
Ga0066388_1009075184	3300005332	Tropical Forest Soil	MRMTSWAILGSLVINLMLGLVVAAVFSVSRPATAAESAQCPTHASAPSRQAPGQPARSGKRYIVAVRMGWAMG*
Ga0070671_1003852921	3300005355	Switchgrass Rhizosphere	MRTTTWAILGSLVINLMLALVIAAVFSAPPPARAAEAAQCPTHGAATGRPAPAQPGRSGHRYIVAVRMGWA*
Ga0070671_1011637281	3300005355	Switchgrass Rhizosphere	MRMTTWAILGSLVINLMLGLVVAAVFSVSRPATAAESAQCPTHASAPSRHAPGRPARSGQRYIVAVRMGWAMG*
Ga0008090_100061031	3300005363	Tropical Rainforest Soil	MTTATWAILGSLCINLMLGLVITAVFSVSPPVKAAELLRCPAHAAAHAPQAPPQPSRSGHRYIVAVRMGWA*
Ga0008090_152424582	3300005363	Tropical Rainforest Soil	MRTATWAILASLGINLMLGLVIAGVFSVSRPVSAAELLRCSAPAATHAPQAAAHPARSGHRYIVAVRMGWAM*
Ga0070710_109726171	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRMTTWAILGSLVINLMLGLVVAAVFSVSRPATAAESAQCPTHASAPSRHAPGQPARSGQRYIVAVRMGWAMG*
Ga0073909_101171851	3300005526	Surface Soil	LTPEPRGGVSYTQANGGERRMRMTTWAILGSLVINLMLGLVVAAVFSVSRPATAAESAQCPTHASAPSRHAPGQPARSGQRYIVAARMGWAMG*
Ga0066903_1006379992	3300005764	Tropical Forest Soil	MRTATWAILGSLGINLMLGLVIASVFSVSPPAKAAELQRCSAHATTHAQPAPAQPARPGNRYIVAVRMGWA*
Ga0066903_1028609643	3300005764	Tropical Forest Soil	MRTTTWAILGSLVINLMLALVIAAVFSAPPPARAAEAAQCPTHGSAAGRPAPAQPGRSGHRYIVAVRMGWA*
Ga0070716_1001643415	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRMTTWAILGSLVINLMLGLVVAAVFSVSRPATAAESAQCPTHASAPSRQAPGQPARSGQRYIVAVRMGWAMG*
Ga0126374_100491004	3300009792	Tropical Forest Soil	MTSWAILGSLVINLMLGLVVAAVFSVSRPATAAESAQCPTHASAPSRRAPGQPARSGQRYIVAVRMGWAMG*
Ga0126374_107165492	3300009792	Tropical Forest Soil	MRTATWAILGSLGINLMLGLVIASVFSVSPPAKAAELQRCSAHATRHAQPVPAQPASPSNRYIVAVRMGWA*
Ga0126384_120411402	3300010046	Tropical Forest Soil	MRTATWAILGSLGINLILGLVIASVFSVSPPAKAAELQRCSAHATTHAQPAPTHPARPSTRYIVAVRMGWA*
Ga0126384_122744231	3300010046	Tropical Forest Soil	MRTATWAILGSLGINLMLGLVIASVFSVSPPAKAAELQRCSAHATRHAQPVPARPASPSNRYIVAVRMGWA*
Ga0126382_101890923	3300010047	Tropical Forest Soil	MRTATWAILGSLGINLMLGLVIASVFSVSPPAKAAELQRCSAHATTHAQPAPTHPARPSTRYIVAVRMGWA*
Ga0126373_101510192	3300010048	Tropical Forest Soil	MRATTWAILGSLAINLMLGLGIATVFSTSPPLMAAESPGCSAHAAAPARQAATQPARAGHRYIVAVRMGWAM*
Ga0126373_104741022	3300010048	Tropical Forest Soil	MKTPGWAILGSLGINLMLGLVIAAVYSGSPPVKAEELQRCSTPAATHAPHTPQAPAKPARSGHRYIVAVRMGWAL*
Ga0126373_115542772	3300010048	Tropical Forest Soil	LAINLLIALLIATVFCVSPPATAAESTGCSAHAAAHARPVPVQPARPNHRYIVAVRMGWAM*
Ga0126373_118770482	3300010048	Tropical Forest Soil	MTSWAILGSLVINLMLGLVVAAVFSVSRPATAAESAQCPTHASAPSRQAPGQPARSGKRYIVAVRMGWAMG*
Ga0126370_117331112	3300010358	Tropical Forest Soil	MRTATWAILGSLGINLMLGLVIASVFSVSPPAKAAELQRCSAHATTHAQPAPAQPARPSNRYIVAVRMGWA*
Ga0126376_132815762	3300010359	Tropical Forest Soil	MRTATWAILGSLGINLMLGLVIASVFSVSPPAKAAELQRCSAHATTHAEPAPTHTARPSIRFIVALRMGCA*
Ga0126372_100856083	3300010360	Tropical Forest Soil	MTSWAILGSLVINLMLGLVVAAVFSVTRPATAAESAQCPTHAAAPSRQAPGHPARSGQRYIVAVRMGWAMG*
Ga0126378_100527526	3300010361	Tropical Forest Soil	MTTTWAILGSLCINLMLGLVITAVFSASPPVKAAELLRCPAHAAAHAPQAPPQPSHSGHRYIVAVRMGWA*
Ga0126381_1000060374	3300010376	Tropical Forest Soil	MRATTWAILGSLAINLTLGLGIATVFSTSPPLMAAESPGCSAHAAAPARQAATQPARAGHRYIVAVRMGWAM*
Ga0126381_1002486943	3300010376	Tropical Forest Soil	MGSPNQGWERHMRTTTWAIMGSLVTNVMIALLIATVFSVSRPATAAELTGCSAHAAAHARPAPVQPARPNHRYIVAVRMGWAM*
Ga0126381_1010128221	3300010376	Tropical Forest Soil	SKNHAGETRMRTATWAILGSLGINLMLGLVFATVFSVSPPVKAAEAPRCAAQAAHAPQASRPPAQPARSGHRYIVAVRMGWAM*
Ga0126381_1014435781	3300010376	Tropical Forest Soil	NLMLGLVITAVFSVSPPVKAAELLRCPAHAAAHAPQAPPQPSHSGHRYIVAVRMGWA*
Ga0126381_1025343662	3300010376	Tropical Forest Soil	MTSWAILGSLVINLMLGLVVATVFSVSRPATAAESAQCPTHASAPSRRAPGQPARSGQRYIVAVRMGWAMG*
Ga0134121_100351056	3300010401	Terrestrial Soil	MTTWAILGSLVINLMLGLVVAAVFSVSRPATAAESAQCPTHASAPSRHAPGQPARSGQRYIVAVRMGWAMG*
Ga0132258_102698513	3300015371	Arabidopsis Rhizosphere	MTTWAILGSLVINLMLGLVVAAVFSVARPATAAESAQCPTHASAPSRRAPGHPARSGQRYIVAVRMGWAMG*
Ga0132255_1001715003	3300015374	Arabidopsis Rhizosphere	MTTWAILGSLVINLMLGLVVAAVFSVARPATAAESAQCPTHASAPSRRAPGHPDRSGQRYIVAVRMGWAMG*
Ga0182036_109861011	3300016270	Soil	ILGSLVINLMLGLVVAAVFSVSRPATAAESAQCPTHASAPSRRAPGQPARSGQRYIVAVRMGWAMG
Ga0182041_112440431	3300016294	Soil	MATTWAILGSLCINLMLGLVLTAVFSASPPVKAAELLRCPAHAAAHAPQAPPQPARSGHRYIVAVRMGW
Ga0182033_117431731	3300016319	Soil	TWAILGSLAINLMLGLVVAAVFSMPPPARAAESPGCSTHPAAHARQAPAQPARSGHRYIVAVRMGWAM
Ga0182032_119240721	3300016357	Soil	MRTATWGILGSLGINLMLGLVIAAVFSLSPPVKAAELLHCSAQAAAHTPQAPAQPARPGRRYIVAVRMGWAM
Ga0182040_117951612	3300016387	Soil	MRTATWGILGSLGINLMLGLVIAAVFSVSRPVDAAELLRCSAHAAAAHAPQAPAQPARSGHRYIVAVRMGWAM
Ga0187824_102816351	3300017927	Freshwater Sediment	MRTTTWAILGSLVINLMLALVIAAVFSAPPPARAPEAAQCPTHGAATGRPAPAQPGRSGH
Ga0187809_102920531	3300017937	Freshwater Sediment	MRNTIWAILGSLAINLVLGLAITTVFSVSPPAQAAGLPACSGHAAAPTRQAPAPPARSGRRYIVAVRMGWAM
Ga0187779_100736532	3300017959	Tropical Peatland	LGSLGINLMLGLVIAAVFSLSPPVKAAELPRCSGHAAAHAPQAPAQPARPGHRYIVAVRMGWAM
Ga0187777_100562362	3300017974	Tropical Peatland	MRTTTWAILGSLVINLMLALVIAAVFSASPPARAAEAAQCPTHGAATGRPAPAQPGRSGHRYIVAVRMGWA
Ga0187777_104485672	3300017974	Tropical Peatland	MRATTWAILGSLAINLMLGLAIATVFSISPPAMAAELPGCSAHAAAPARQAPAQPARTGHRYIVAVRMGWAM
Ga0210407_100187963	3300020579	Soil	MRMTTWAILGSLVINLMLALVMASVFSVSLPARATESAQCSTHPAAPTRQTPAPPARSGHRYIVAVRMGWAMG
Ga0210399_102182186	3300020581	Soil	MRMTTWAILGSLVINLMLALVMASVFSVSLPARATESAQCSTHPAAPTRQTPAPPARSGH
Ga0210399_105717191	3300020581	Soil	VINLMLALVMASVFSVSLPARATESAQCSTHPAAPTRQTPAPPARSGHRYIVAVRMGWAM
Ga0213874_100098512	3300021377	Plant Roots	MRARGWALLGSLVINLMLALVIVTVFSVSRPARAAESAQCPTHPAPTGRQSPAPPARSGQRYIVAVRMGWAMG
Ga0213876_105321961	3300021384	Plant Roots	MGTKAWGILGSLAINLMLALLVAAVFSATRPVRAAEAAQCSTHPAPAGRTAPAHPGRPGQRYIV
Ga0126371_100768405	3300021560	Tropical Forest Soil	MRTATWAILGSLGINLMLGLVIASVFSVSPPAKAAELQRCSAHATTHAQPAPAQPARPGNRYIVAVRMGWA
Ga0126371_103164423	3300021560	Tropical Forest Soil	MTTTWAILGSLCINLMLGLVITAVFSVSPPVKAAELLRCPAHAAAHAPQAPPQPSHSGHRYIVAVRMGWA
Ga0126371_107384642	3300021560	Tropical Forest Soil	MRTRTWAMLGSLGINLMLGVAVAAVFSVSPPVLAAASTACPSSHAPQARSAPTQPARSGRRYIVAVRMGWA
Ga0126371_113098661	3300021560	Tropical Forest Soil	MRMTSWAILGSLVINLMLGLVVAAVFSVSRPATAAESAQCPTHASAPSRQAPGQPARSGKRYIVAVRMGWAMG
Ga0126371_128396162	3300021560	Tropical Forest Soil	MRATTWAILGSLAINLMLGLGIATVFSTSPPLMAAESPGCSAHAAAPARQAATQPARAGHRYIVAVRMGWAM
Ga0209465_102474092	3300027874	Tropical Forest Soil	MRMTSWAILGSLVINLMLGLVVAAVFSVSRPATAAESAQCPTHASAPSRRAPGQPARSGQRYIVAVRMGWAMG
Ga0170820_149857461	3300031446	Forest Soil	MRMTTWAILGSLVINLMLALVMASVFSVSLPARATESAQCSTHPAAPTRQTPAPPARSGHRYIVAARMGWAMG
Ga0170818_1060967631	3300031474	Forest Soil	MRMTTWAILGSLVINLMLALVVASVFSVSLPARATESAQCSTHPAAPTRQTPAPPARSGHRYIVAVRMGWAMG
Ga0318516_100424802	3300031543	Soil	MATTWAILGSLCINLMLGLVLTAVFSASPPVKAAELLRCPAHAAAHAPQAPPQPARSGHRYIVAVRMGWA
Ga0318516_100619684	3300031543	Soil	MRMTTWAILGSLVINLMLGLVVAAVFSVSRPATAAESAQCPTHASAPSRRAPGQPARSGQRYIVAVRMGWAMG
Ga0318516_103915381	3300031543	Soil	MRKTTWAILGSLVINLVLGLGLAAVFSVSPQAQAEDLPACSTHVAAHTRPAPAPPARPGHRYIVAVRMGWAM
Ga0318534_100578913	3300031544	Soil	MRATTWAILGSLAINVVLGLAIATLFGVSPPLMAAESPGCSAHAAAPARQAPAQPARTGHRYIVAVRMGWAL
Ga0318534_100720082	3300031544	Soil	MRTATWAIVGSLAINLMLGLVIATVFSVSSPLKAAEPRRCSEHSTAHASQAPAAPPAPAQPARPSHRYIVAVRMGWAL
Ga0318534_101248721	3300031544	Soil	MATTWAILGSLCINLMLGLVITAVFSVSPPVKAAELLRCPAHAAAHAPQAPPQPARSGHRYIVAVRMGWA
Ga0318538_101882932	3300031546	Soil	MTTTWAILGSLCINLMLGLVITAVFSVSPPVKAAELLRCPAHAAAHAPQAPPQPARSGHRYIVAVRMGWA
Ga0318515_106244221	3300031572	Soil	MTTWAILGSLVINLMLGLVVAAVFSVSRPATAAESAQCPTHASAPSRRAPGQPARSGQRYIVAVRMGWAMG
Ga0318542_101731481	3300031668	Soil	MRTETWAILGSLGINLMLGLVIAAVFSVSRPVDAAELLRCSAHAAAAHAPQAPAQPARSGHRYIVAVRMGWAM
Ga0318574_100398431	3300031680	Soil	MATTWAILGSLCINLMLGLVLTAVFSASPPVKAAELLRCPAHAASHAPQAPPQPARSGHRYIVAVRMGWA
Ga0318560_100736733	3300031682	Soil	NAGETRMATTWAILGSLCINLMLGLVLTAVFSASPPVKAAELLRCPAHAAAHAPQAPPQPARSGHRYIVAVRMGWA
Ga0307476_107324562	3300031715	Hardwood Forest Soil	MRTETWAILGSLCINLMLGLVIASVFSVSRPVTAAELPQCSTHATTRAGSAPPARPAPSGKRYIVAVRMGWAL
Ga0310813_115707072	3300031716	Soil	MRMTTWAILGSLVINLMLGLVVAAVFSVARPATAAESAQCPTHASAPSRKAPGHPARSGQRYIVAVRMGWAMG
Ga0318493_100337931	3300031723	Soil	LVINLMLGLVVAAVFSVSRPATAAESAQCPTHASAPSRRAPGQPARSGQRYIVAVRMGWAMG
Ga0318502_100758931	3300031747	Soil	GETRMTTTWAILGSLCINLMLGLVITAVFSVSPPVKAAELLRCPAHAAAHAPQAPPQPARSGHRYIVAVRMGWA
Ga0318494_103373541	3300031751	Soil	INLMLGLVITAVFSVSPPVKAAELLRCPAHAAAHAPQAPPQPARSGHRYIVAVRMGWA
Ga0307475_104960522	3300031754	Hardwood Forest Soil	MRMTTWAVLGSVVINLMLALVMASVFSVSLPARATESAQCSTHPAAPTRQAPAPPARSGHRYIVAVRMGWAMG
Ga0307475_105431152	3300031754	Hardwood Forest Soil	MRTATWAIFGSLCINLMLGLVIASVFSVSRPVTAAELPRCSTSATTRAGSAPPAQPARSGKRYIVAVRMGWAL
Ga0318554_100765373	3300031765	Soil	MRATTWAILGSLAINVVLGLAIATLFGVSPPLMAAESPGCSAHAAAPARPAPAQPARTGHRYIVAVRMGWAL
Ga0318521_103643291	3300031770	Soil	MRMTTWAILGSLVINLMLGLVVAAVFSVSRPATAAESAQCPTHASAPSRRAPGQPARSGQRYIVAVRMG
Ga0318521_104379272	3300031770	Soil	MRATAWAILGSLAINVVLGLAIATLFGVSPPLMAAESPGCSAHAAAPARQAPAQPARTGHRYIVAVRMGWAL
Ga0318547_107022991	3300031781	Soil	MRTATWGILGSLGINLMLGLVIAAVFSVSRPVDAAELLRCSAHAAAAHAPQAPAQPARSGHRYIVAVRMG
Ga0318552_101108581	3300031782	Soil	MRTVTWAILGSLGINLMLGLVIAAVFSVSRPVDAAELLRCSAHAAAAHAPQAPAQPARSGHRYIVAVRMGWAM
Ga0318548_100378441	3300031793	Soil	MTTTWAILGSLCINLMLGLVLTAVFSASPPVKAAELLRCPAHAAAHAPQAPPQPARSGHRYIVAVRMGWA
Ga0318557_103197521	3300031795	Soil	ILGSLGINLMLGLVIAAVFSVSRPVDAAELLQCSAHAAAHAPQAPAQPARSGHRYIVAVRMGWAM
Ga0307478_100427942	3300031823	Hardwood Forest Soil	MRTATLAILGSLAINLMLGLVIAAVFSVSPPARAAELPGCSTHTAAHAREAPAQPVRSGHRYIVAVRMGWAMG
Ga0318564_100502833	3300031831	Soil	MRATTWAILGSLAINVVLGLAIATLFGVSPPLMAAESPGCSSHAAAPARQAPAQPARTGHRYIVAVRMGWAL
Ga0318499_102674752	3300031832	Soil	MATTWAILGSLCINLMLGLVLTAVFSASPPVKAAELLRCPAHAAAHAPQAPPQPARSGHRYIVAVR
Ga0318517_104260601	3300031835	Soil	TWAILGSLAINVVLGLAIATLFGVSPPLMAAESPGCSAHAAAPARQAPAQPARTGHRYIVAVRMGWAL
Ga0318536_101525731	3300031893	Soil	IYGGKTIAGETRMRTETWAILGSLGINLMLGLVIAAVFSVSRPVDAAELLRCSAHAAAAHAPQAPAQPARSGHRYIVAVRMGWAM
Ga0318551_100637143	3300031896	Soil	RHMRATAWAILGSLAINVVLGLAIATLFGVSPPLMAAESPGCSAHAAAPARQAPAQPARTGHRYIVAVRMGWAL
Ga0318551_109071652	3300031896	Soil	NLVLGLGLAAVFSVSPQAQAADLPACSTHVAAHTRPAPAPPARPGHRYIVAVRMGWAM
Ga0318520_100667903	3300031897	Soil	VINLMLGLVVAAVFSVSRPATAAESAQCPTHASAPSRRAPGQPARSGQRYIVAVRMGWAM
Ga0306923_110631902	3300031910	Soil	NLMLGLVITAVFSVSPPVKAAELLRCPAHAAAHAPQAPPQPARSGHRYIVAVRMGWA
Ga0306923_113281402	3300031910	Soil	MRKTTWAILGSLVINLVLGLGLAAVFSVSPQAQAADLPACSTHVAAHTRPAPAPPARPGHRYIVAVRMGWAM
Ga0310916_110671932	3300031942	Soil	MRATTWAILGSLAINVVLGLAIATLFGVSPPLMAAESPGCSAHAAAPARQAPAQPARTGHRYIVAVRMGWA
Ga0310913_106204142	3300031945	Soil	MTTTWAILGSLCINLMLGLVITAVFSVSPPVKAAELLRCPAHAAAHAPQAPPQPARSGHRYIVAVRMGW
Ga0307479_107384021	3300031962	Hardwood Forest Soil	ATWAIFGSLCINLMLGLVIASVFSVSRPVTAAELPRCSTSATTRAGSAPPAQPARSGKRYIVAVRMGWAL
Ga0318569_102123641	3300032010	Soil	MRMTTWAILGSLVINLMLGLVVAAVFSVSRPATAAESAQCPTHASAPSRRAPGQPARSGQRYIVAVRMGW
Ga0318558_104251362	3300032044	Soil	MTTTWAILGSLCINLMLGLVITAVFSVSPPVKAAELLRCPGHTAAHATPAPPQPPRSGHRYIVAVRMGWAM
Ga0318533_101424564	3300032059	Soil	MATTWAILGSLCINLMLGLVLTAVFSASPPVKAAELLRCPAHAAAHAPQAPPQPARSGHRYIVAVRM
Ga0318504_103393261	3300032063	Soil	MRATTWAILGSLAINVVLGLAIATLFGVSPPLMAAESPGCSAHAAAPARQAPAQPARTGHRYIV
Ga0318524_106523941	3300032067	Soil	MRATTWAILGSLAINVVLGLAIATLFGVSPPLMAAESPGCSAHAAAPARQAPAQPARTGHRYIVA
Ga0306924_125011351	3300032076	Soil	MRTATWAILGSLCITLMLGLVITAVFSLSPPVKAAELLRCPSHAAAHAPHAPAQPPRSGHRYIVAVRMGWA
Ga0307471_1004090681	3300032180	Hardwood Forest Soil	MRMTTWAILGSLVINLMLALVMGSVFSVSLPARARESAQCSTHPVAPTRQTPAPPARSGHRYIVAVRMGWAMG
Ga0306920_1013401252	3300032261	Soil	MRATTWAILGSLAINLMLGLVIATVFSVSPPAMAAESPACSTHAAAPARQAPAQPARSGHRYIVAVRMGWAM
Ga0306920_1014004252	3300032261	Soil	MRSTAWAILGSLVINLMLGFGIAAVFSASPPARAAEAAQCSTHPAPAGRPAPAQPARSGPRYIVAVRMGWA
Ga0335085_105675032	3300032770	Soil	MRTTTWAILGSLVINLMLALAIAAVFSVPPPARAAEAAQCSTHGTAAGRPAPAQPGRSGHRYIVAVRMGWA
Ga0335077_103839703	3300033158	Soil	MRTTTWAILGSLVINLMLALVITAVFSAPPPARAAEAAQCPTHGTAAGRSAPAQPGRSGHRYIVAVRMGWA
Ga0310914_109251353	3300033289	Soil	ILGSLCINLMLGLVITAVFSVSPPVKAAELLRCPAHAAAHAPQAPPQPARSGHRYIVAVRMGWA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089351

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences