NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F089364

Metagenome / Metatranscriptome Family F089364

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F089364
Family Type Metagenome / Metatranscriptome
Number of Sequences 109
Average Sequence Length 48 residues
Representative Sequence MKQTLRDLAEKLGCRLLGDSSITVTSVSSLQSATSDCLVFVEDAQYLD
Number of Associated Samples 96
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 29.36 %
% of genes near scaffold ends (potentially truncated) 99.08 %
% of genes from short scaffolds (< 2000 bps) 86.24 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (90.826 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds
(11.009 % of family members)
Environment Ontology (ENVO) Unclassified
(26.606 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(43.119 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 10.53%    β-sheet: 5.26%    Coil/Unstructured: 84.21%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF03279Lip_A_acyltrans 72.48
PF04613LpxD 8.26
PF04366Ysc84 7.34
PF00196GerE 1.83
PF14602Hexapep_2 0.92
PF02321OEP 0.92
PF01694Rhomboid 0.92
PF13520AA_permease_2 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG1560Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)Lipid transport and metabolism [I] 72.48
COG4261Predicted acyltransferase, LPLAT superfamilyGeneral function prediction only [R] 72.48
COG1044UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferaseCell wall/membrane/envelope biogenesis [M] 8.26
COG2930Lipid-binding SYLF domain, Ysc84/FYVE familyLipid transport and metabolism [I] 7.34
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 1.83
COG0705Membrane-associated serine protease, rhomboid familyPosttranslational modification, protein turnover, chaperones [O] 0.92


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms90.83 %
UnclassifiedrootN/A9.17 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001356|JGI12269J14319_10039379All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2988Open in IMG/M
3300001356|JGI12269J14319_10145015All Organisms → cellular organisms → Bacteria1031Open in IMG/M
3300001546|JGI12659J15293_10119053All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300002245|JGIcombinedJ26739_101340906All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300005712|Ga0070764_10068335All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1850Open in IMG/M
3300005947|Ga0066794_10124913All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300005995|Ga0066790_10429344All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae565Open in IMG/M
3300006050|Ga0075028_100458660All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium738Open in IMG/M
3300006052|Ga0075029_100119428All Organisms → cellular organisms → Bacteria1599Open in IMG/M
3300006052|Ga0075029_100463641All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300006052|Ga0075029_101216370All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300006059|Ga0075017_101272352All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300006086|Ga0075019_11014751All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300006162|Ga0075030_101359206All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300006172|Ga0075018_10699104All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300006174|Ga0075014_100994496Not Available508Open in IMG/M
3300009038|Ga0099829_10021368All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4450Open in IMG/M
3300009038|Ga0099829_10906935All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium731Open in IMG/M
3300009088|Ga0099830_10285080All Organisms → cellular organisms → Bacteria1315Open in IMG/M
3300009628|Ga0116125_1192615All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium578Open in IMG/M
3300009630|Ga0116114_1172847All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300009632|Ga0116102_1019367All Organisms → cellular organisms → Bacteria → Acidobacteria2371Open in IMG/M
3300009640|Ga0116126_1287042All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300009645|Ga0116106_1039216All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1607Open in IMG/M
3300010341|Ga0074045_10774696All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium607Open in IMG/M
3300010343|Ga0074044_10313878All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1030Open in IMG/M
3300010379|Ga0136449_103666762All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium581Open in IMG/M
3300011270|Ga0137391_11194888All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium608Open in IMG/M
3300012096|Ga0137389_10982220All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium724Open in IMG/M
3300012199|Ga0137383_11337242All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300012205|Ga0137362_10332162All Organisms → cellular organisms → Bacteria1316Open in IMG/M
3300012205|Ga0137362_11692261All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300012350|Ga0137372_10722469All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium720Open in IMG/M
3300012361|Ga0137360_11541570All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300012683|Ga0137398_11042248Not Available565Open in IMG/M
3300014491|Ga0182014_10279451Not Available864Open in IMG/M
3300014491|Ga0182014_10297744Not Available829Open in IMG/M
3300017823|Ga0187818_10443312Not Available579Open in IMG/M
3300017938|Ga0187854_10036647All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2542Open in IMG/M
3300017938|Ga0187854_10311180All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium671Open in IMG/M
3300017943|Ga0187819_10223040Not Available1107Open in IMG/M
3300017948|Ga0187847_10772376All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300017995|Ga0187816_10104952All Organisms → cellular organisms → Bacteria1214Open in IMG/M
3300018008|Ga0187888_1294341All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium625Open in IMG/M
3300018009|Ga0187884_10060659All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1735Open in IMG/M
3300018012|Ga0187810_10320418All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium643Open in IMG/M
3300018033|Ga0187867_10095880All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1733Open in IMG/M
3300018033|Ga0187867_10285573All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium925Open in IMG/M
3300018033|Ga0187867_10350122Not Available822Open in IMG/M
3300018035|Ga0187875_10513350All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium635Open in IMG/M
3300018042|Ga0187871_10308487All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium875Open in IMG/M
3300018090|Ga0187770_11350630Not Available578Open in IMG/M
3300020579|Ga0210407_10717581All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium774Open in IMG/M
3300020581|Ga0210399_10808046All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium765Open in IMG/M
3300020582|Ga0210395_10161405All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1675Open in IMG/M
3300021170|Ga0210400_11678128All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300021181|Ga0210388_10049210All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3509Open in IMG/M
3300021181|Ga0210388_10520834All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1043Open in IMG/M
3300021432|Ga0210384_10201864All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1787Open in IMG/M
3300021474|Ga0210390_10080775All Organisms → cellular organisms → Bacteria → Acidobacteria2696Open in IMG/M
3300022872|Ga0224526_1057966All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium745Open in IMG/M
3300025442|Ga0208034_1016258All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2201Open in IMG/M
3300025453|Ga0208455_1041994All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1005Open in IMG/M
3300025507|Ga0208188_1103963All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium637Open in IMG/M
3300026291|Ga0209890_10122828All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium883Open in IMG/M
3300026469|Ga0257169_1089053All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300026920|Ga0208575_1016440All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium676Open in IMG/M
3300027432|Ga0209421_1117650All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium546Open in IMG/M
3300027439|Ga0209332_1035697All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium932Open in IMG/M
3300027583|Ga0209527_1132060All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300027590|Ga0209116_1118644All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium580Open in IMG/M
3300027609|Ga0209221_1004065All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3649Open in IMG/M
3300027633|Ga0208988_1022664All Organisms → cellular organisms → Bacteria → Acidobacteria1614Open in IMG/M
3300027652|Ga0209007_1028746All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1428Open in IMG/M
3300027910|Ga0209583_10472542All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax613Open in IMG/M
3300027911|Ga0209698_10475688All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium969Open in IMG/M
3300027911|Ga0209698_11172158All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium567Open in IMG/M
3300028268|Ga0255348_1018305All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1424Open in IMG/M
3300028560|Ga0302144_10107463All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium898Open in IMG/M
3300028652|Ga0302166_10036764All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium999Open in IMG/M
3300028777|Ga0302290_10003827All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3591Open in IMG/M
3300028868|Ga0302163_10000807All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis6523Open in IMG/M
3300028870|Ga0302254_10021804All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2228Open in IMG/M
3300029817|Ga0247275_1074577All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium925Open in IMG/M
3300029915|Ga0311358_11054390All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium553Open in IMG/M
3300029917|Ga0311326_10390796All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium691Open in IMG/M
3300029939|Ga0311328_10338101Not Available1101Open in IMG/M
3300029956|Ga0302150_10145345All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium905Open in IMG/M
3300029999|Ga0311339_11325307All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium651Open in IMG/M
3300030002|Ga0311350_10037127All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis4245Open in IMG/M
3300030057|Ga0302176_10102801All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1119Open in IMG/M
3300030339|Ga0311360_10021113All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis6046Open in IMG/M
3300030494|Ga0310037_10135311Not Available1125Open in IMG/M
3300030518|Ga0302275_10093217All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2044Open in IMG/M
3300030617|Ga0311356_11523452All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium604Open in IMG/M
3300030618|Ga0311354_10136035All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2700Open in IMG/M
3300030618|Ga0311354_10484305All Organisms → cellular organisms → Bacteria1227Open in IMG/M
3300030760|Ga0265762_1070616All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium732Open in IMG/M
3300031057|Ga0170834_109763492All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300031236|Ga0302324_100644504All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1508Open in IMG/M
3300031247|Ga0265340_10220842All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium849Open in IMG/M
3300031524|Ga0302320_10948667All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium922Open in IMG/M
3300031708|Ga0310686_102040359All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium608Open in IMG/M
3300031720|Ga0307469_10996012All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium782Open in IMG/M
3300031720|Ga0307469_12330558All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300032205|Ga0307472_100456769All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1087Open in IMG/M
3300033405|Ga0326727_10759376All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium758Open in IMG/M
3300033433|Ga0326726_11423478All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium675Open in IMG/M
3300034065|Ga0334827_129815All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium802Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds11.01%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.09%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland9.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.26%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil8.26%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland7.34%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog7.34%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa5.50%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen4.59%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.67%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.67%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.75%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil2.75%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil2.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.83%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.83%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog1.83%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.83%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.92%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.92%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.92%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.92%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300001546Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005947Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190EnvironmentalOpen in IMG/M
3300005995Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009628Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10EnvironmentalOpen in IMG/M
3300009630Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40EnvironmentalOpen in IMG/M
3300009632Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40EnvironmentalOpen in IMG/M
3300009640Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40EnvironmentalOpen in IMG/M
3300009645Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300014491Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaGEnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017938Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300018008Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018033Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10EnvironmentalOpen in IMG/M
3300018035Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300022872Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25EnvironmentalOpen in IMG/M
3300025442Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025453Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025507Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)EnvironmentalOpen in IMG/M
3300026291Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)EnvironmentalOpen in IMG/M
3300026469Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-BEnvironmentalOpen in IMG/M
3300026920Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN397 (SPAdes)EnvironmentalOpen in IMG/M
3300027432Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027439Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027583Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027590Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027609Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027633Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027652Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028268Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v5EnvironmentalOpen in IMG/M
3300028560Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2EnvironmentalOpen in IMG/M
3300028652Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_3EnvironmentalOpen in IMG/M
3300028777Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_3EnvironmentalOpen in IMG/M
3300028868Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_3EnvironmentalOpen in IMG/M
3300028870Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4EnvironmentalOpen in IMG/M
3300029817Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25EnvironmentalOpen in IMG/M
3300029915III_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029917I_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029939I_Bog_E3 coassemblyEnvironmentalOpen in IMG/M
3300029956Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2EnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030002II_Fen_N1 coassemblyEnvironmentalOpen in IMG/M
3300030057Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1EnvironmentalOpen in IMG/M
3300030339III_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030518Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2EnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030760Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031247Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaGHost-AssociatedOpen in IMG/M
3300031524Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300034065Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12269J14319_1003937943300001356Peatlands SoilMKRTLRDLAEQLGCRLLGDSSVTVTSVSSLQSATTEDLVFVEDVQYLDTALA
JGI12269J14319_1014501523300001356Peatlands SoilMKQTLRDLAEKLGCRLLGDSSITVTSVSSLQSATSDCLVFVEDAQYLD
JGI12659J15293_1011905313300001546Forest SoilMKQTLRDLAEKLGCRLLGEGSVTVSSVSSLQSATGESL
JGIcombinedJ26739_10134090613300002245Forest SoilMKQTLRDLAEKLGCRLLGEGSVTVSSVSSLQSATGES
Ga0070764_1006833533300005712SoilMKRTLRDLAEKLNCHLLGDSSITVATVSSPQSATSTSLVFVEDPQHLDTALRSSAAA
Ga0066794_1012491323300005947SoilMKQSLRDLAGKLGCHLLGDASIVVTHVSSLQSATGDSL
Ga0066790_1042934413300005995SoilMKQTLRELAEKLGCRLLGDGSISVSSVASPQSAADDSLIFAEDATHLEAALNTS
Ga0075028_10045866023300006050WatershedsMKQSLRDLAGKLGCHLLGDGSAIVTHVASLKSANAES
Ga0075029_10011942813300006052WatershedsMKQTLRDLAEKLGCHLLGDASVTVTTVSSLQSATDRTLV
Ga0075029_10046364113300006052WatershedsMKQTLRDLAGKLGCHLLGDSSVIVTRVSSLQSATSGSLVFVED
Ga0075029_10121637023300006052WatershedsMKQTLRDLAEKLGCRLLGDSSITVTSVSSLQCATS
Ga0075017_10127235213300006059WatershedsMKQTLRDLAEKLGCRLLGDSSITVTKVSSLQSASGESLVFVEDAQHLDAALRSPAA
Ga0075019_1101475123300006086WatershedsMKTSLHDLAEKLNCRLLGDGSIAVTTVSSVQSASAETIIFVDDAK
Ga0075030_10135920613300006162WatershedsMKQSLRDLAEKLGCLLLGDGSIAVTNVSSLQSATSES
Ga0075018_1069910413300006172WatershedsMKQSLRDLAGKLGCHLLGDGSITVTHVASLKSATPESLVFVD
Ga0075014_10099449613300006174WatershedsMKLNSRDLAQQLGGRLVGDGLVSIASVSSLQSANTESI
Ga0099829_1002136813300009038Vadose Zone SoilMKRTLRDLAEKLGCHLLGDNSITVTEVSSLQSATSSSLVFVDDAQYLGT
Ga0099829_1090693523300009038Vadose Zone SoilMKQTLRDLADNLGCRLLGDNSITVTEVSSLQSATSSSLVFVDD
Ga0099830_1028508023300009088Vadose Zone SoilMKRSLRDLADNLGCRLLGDSSITVTSVSSLQSASSDSL
Ga0116125_119261513300009628PeatlandMKQTLRELAEKLGCHLLGDSSIAVTNVSSPQSATSDSLV
Ga0116114_117284723300009630PeatlandMKHTLRDLAEKLNCHLLGDGSITVTTVSSLQSAKSDNLVFVED
Ga0116102_101936713300009632PeatlandMKHTLRDLAEKLGCRLLGDNSITVVTVSSLQSAKSDSLVF
Ga0116126_128704213300009640PeatlandMKQTLRDLAEKLGCRLLGDNSITVVTVSSLQSAKSDSLVFVDDAQH
Ga0116106_103921633300009645PeatlandMKLTLRDLAEKLNCHLLGDGSITVTTVSSLQSAKSDNLVFVED
Ga0074045_1077469613300010341Bog Forest SoilMKITLRELAEKLNCRLLGDGTIAVTTVSSLQSAGADTL
Ga0074044_1031387823300010343Bog Forest SoilMKQTLRDLAEHLGCGLLGDSSVTVTTVSSLQSATPESLVFVEDAQYLD
Ga0136449_10366676213300010379Peatlands SoilMKQTLRDLAEKLGCRLLGDNSITVASVSSLQSATRHSLVF
Ga0137391_1119488813300011270Vadose Zone SoilMKQTLRDLAEKFGCRLLGDSSITVTSVSSLQSATSGTLV
Ga0137389_1098222013300012096Vadose Zone SoilMKRTLRDLAEKLGCHLLGDNSITVTEVSSLQSATSSSLVFVDDAQYLGTALCSSA
Ga0137383_1133724213300012199Vadose Zone SoilMKQTLRNLAEKLGCRLLGDGSITVTSVSSLQSATSGSLVF
Ga0137362_1033216223300012205Vadose Zone SoilMKLTLRDLAEKLNCRLLGDGSITVTSVSSPQSATSDSLVFVDDAQYLDAAL
Ga0137362_1169226113300012205Vadose Zone SoilMKQTLRDLAEKLGCSLLGDSSITVTSLSSLQSATSGSLV
Ga0137372_1072246923300012350Vadose Zone SoilMKHTLRDLAEQLGGRVVGDGSVSITSVSSLRSANAESLVFVE
Ga0137360_1154157013300012361Vadose Zone SoilMKQTLRDLAEQLGCRILGDSSVTVTSVSSLQSATSDSLV
Ga0137398_1104224813300012683Vadose Zone SoilMKQTLRSLAEKVGCRLIGSGSTTVTAVASLQSANKESLVFVEDTQHLDTAL
Ga0182014_1027945123300014491BogMKQTLRDLAEKLGCRLLGDHSITVTSVSSLQSATSHSLVFVEDAQHLDTA
Ga0182014_1029774413300014491BogMKQTLRDLADQLGCRLLGDHSITVTSVSSLQSATSHSLVFVEDAQHLDT
Ga0187818_1044331223300017823Freshwater SedimentMKQSLATLADQLGCRLIGDGSVTVNRLSSLQSADASSLVFVDDAK
Ga0187854_1003664743300017938PeatlandMKQTLRDLAEKLGCRLLGDSSTTVTSVSSLQSATS
Ga0187854_1031118023300017938PeatlandMKQTLRELAEKLGCHLLGDSSIAVTNVSSPQSATSDSLVFVEDTSHLDG
Ga0187819_1022304023300017943Freshwater SedimentMKLTLRDLAEKLGCHLLGDSSVTVTNVSSLQSATSQSLVFVEDAQYF
Ga0187847_1077237623300017948PeatlandMKLTLRDLAEKLGCRLLGDSSTVVASVSSLQTAKSESLVFVEDGKQLDAAIQS
Ga0187816_1010495223300017995Freshwater SedimentMKQTLRDLAEKLGCRLLGDGSIAVATVSSLQSAKSDSLIFVEEAQH
Ga0187888_129434113300018008PeatlandMKQTLRDLAEKLGCRLLGDSSTTVTSVSSLQSATSHSL
Ga0187884_1006065913300018009PeatlandMKQTLRELAEKLGCHLLGDSSIAVTNVSSPQSATSDSLVFVEDTSHLDGALGSPAAALIVGDFAAKNFAAA
Ga0187810_1032041823300018012Freshwater SedimentMEHTLRDLAEKLGCRLFGDTSITVATVSSLQSAKSDSLVF
Ga0187867_1009588033300018033PeatlandMKLTLRDLAEKLNCHLLGDGSITVTTVSSLQSAKSNNLVFVED
Ga0187867_1028557313300018033PeatlandMKQTLLDLAEKLGCRLVGDRSVAVSNISSLQSAKSDSLIF
Ga0187867_1035012223300018033PeatlandMKQTLRDLAEKLGCRLLGDHSITVTSVSSLQSAASHSLVFVE
Ga0187875_1051335023300018035PeatlandMKQTLLDLAEKLGCRLVGDRSVAVSNISSLQSAKSDSLIFVEESQHLDAA
Ga0187871_1030848723300018042PeatlandMDAMKQSLCDLAARLGCRLQGDASTTVTNVSSLQSASSDSLVFIEDADR
Ga0187770_1135063013300018090Tropical PeatlandMKTTLSDLAAKLACRVVGDGSVTVSSVSSLQSANSAS
Ga0210407_1071758113300020579SoilMKQTLRDLAAKLNCHLLGDTSVTVTGVSSLQSSTRGSLVFVEDAQHLDTALRSSAAAAI
Ga0210399_1080804613300020581SoilMKQTLRDLAAKLNCHLLGDTSVTVTGVSSLQSSTRGSLVFVEDAQHLDTALRSSAAAVIAGDF
Ga0210395_1016140513300020582SoilMKQTLRDLAEKLSCHLLGDSSITVATVSSPQSATSTSLVFVEDPQHLDTALRSSAAA
Ga0210400_1167812813300021170SoilMKQTLRDLAAKLNCHLLGDSSVTVTSVSSLQSSTRGSLVFVEDAQHLDTALRSSAAAVIAGDFASNATSKPILIS
Ga0210388_1004921053300021181SoilMKRTLRDLAEKLNCHLLGDSSITVATVSSPQSATSTSLVFVEDPQHLDTALRSSA
Ga0210388_1052083413300021181SoilMKQTLNDLAEKLGCHIIGDGSITVTTVSSPHSATSDSMVFVEDPQYLEAAL
Ga0210384_1020186413300021432SoilMKQTLRDLAEQLGCRLLGDASLIVTSVSSLQSATSGSLVFVDKPQHLDIALRSSAAALIAGDFASA
Ga0210390_1008077543300021474SoilMKRTLRDLAEKLNCHLLGDSSITVATVSSPQSATSTSLVF
Ga0224526_105796613300022872SoilMKQTLRELAEKLGCHLLGDSSIAVTNVSSPQSATSDSLVFVEDTS
Ga0208034_101625813300025442PeatlandMKQTLRDLAEKLGCRLLGDSSTTVTSVSSLQSATSQSLVFVDDARHLDAALG
Ga0208455_104199413300025453PeatlandMKHTLRDLAEKLGCPLLGDSSVTVATVSSLQSAKSESLVFVDDAQHLDAAL
Ga0208188_110396323300025507PeatlandMKHTLRDLAEQLGCRLLGDSSITVTTVSSLQSATPASLVFVEDALYL
Ga0209890_1012282823300026291SoilMKQTLRDLAEKIGCRLLGDPSITVTTVSSLQSANSDSLVFVEDAQHLD
Ga0257169_108905323300026469SoilMKQTLRDLAEKLGCRLLGDSSITVTSVSSLQSATSGTLVFV
Ga0208575_101644013300026920SoilMKQTLRDLAEQLGCRLLGDASLIVTSVSSLQSATSGSLVFVDNPQRLDIALRSSAAALIAGDFASAATSKTIL
Ga0209421_111765023300027432Forest SoilMKQHLRDLAEKLGCRLLGDGSITVTHLSSLKSADEESLVFVDDAKHLDAALASHAA
Ga0209332_103569723300027439Forest SoilMKQSLRSLAEKLGCRLIGSGSITVTAVSSLQSASKESLVFAEDAQHLDAALHSAAAAIIA
Ga0209527_113206023300027583Forest SoilMKQTLSALAENLRCRLIGDGSVTVTAVSSLHSANEESLVFVEDTPRLNIALRSPA
Ga0209116_111864413300027590Forest SoilMKQTLRDLAEKLNCHLLGDSSLSVTTVSSLRSATSTSLVFVEDAQHLD
Ga0209221_100406513300027609Forest SoilMKQTLRDLAEKLNCHLLGDSSLSVTTVSSLRSATSTSLVFVEDAQHLDSALRSAAAAVIVGDFAA
Ga0208988_102266433300027633Forest SoilMKQTLRALADNLGCHLIGDGSVTVTAVSSLHSANEESLVFVEDTPRLNIALRSPAGAVIAGQFAGGF
Ga0209007_102874633300027652Forest SoilMKQTMRDLADKLGSHLRGDGSVSVTSVSSLQSATGESLVFVEDAKHLDAAL
Ga0209583_1047254223300027910WatershedsMKQTLSDLAAKLGCQLLGDSSITVTSVSSLQSANAESIVFVEDAKHLDAALASP
Ga0209698_1047568823300027911WatershedsMKQTLRDLADKLECRLIGDGSIAVTAVSSLQSATSQS
Ga0209698_1117215813300027911WatershedsMKQTLRDLAEKLGCRLLGDSSITVTSVSSLQCATSDSLVFVEDAQHLDTALRS
Ga0255348_101830533300028268SoilMKQTLRELAEKLGCHLLGDSSIAVTNVSSPQSATSDSLVFVED
Ga0302144_1010746313300028560BogMSQTLRSLAEKLGCHLLGDPSVTVSRVSSLQSATSDSLVFV
Ga0302166_1003676413300028652FenMKQTLRDLAEYLGCRLVGDGDIIVANLSSFLSASPGSLIFVDDAKHLD
Ga0302290_1000382753300028777FenMKRTLRDLAGNLGCHLLGDGSIAVTHVSSLKSANAESLVFVDDPKHLDA
Ga0302163_1000080783300028868FenMKRTLRDLAGNLGCHLLGDGSIAVTHVSSLKSANAESLVFVD
Ga0302254_1002180413300028870FenMKRTLRDLAGNLGCHLLGDGSIAVTHVSSLRSANHESLVFVDDPKHL
Ga0247275_107457713300029817SoilMKHTLRDLAEKLGCPLLGDSSVTVATVSSLQSAKSESLVFVDDAQHLDAALRSSA
Ga0311358_1105439013300029915BogMSQTLRSLAEKLGCHLLGEPSVTVSRVASLQSATSGTLVFVEDAQHLDVALQ
Ga0311326_1039079613300029917BogMSQTLRSLAEKLGCHLLGEPSVTVSRVASLQSATSGTLVFVEDAQHLDVALQSEA
Ga0311328_1033810123300029939BogMSQNLRSLAEKLGCHLLGDPSVTVSRVSSLQSATPD
Ga0302150_1014534523300029956BogMSQNLRSLAEKLGCHLLGDPSVTVSRVSSLQSATPDGLVFVEDAQHLDAALESQAA
Ga0311339_1132530713300029999PalsaMNRTLRDLVEQLGCQLLGDGSLTVSSVSSLPSATSDSLVFVEDARHLDLALASSATAVIAGDFATGSTSKP
Ga0311350_1003712763300030002FenMKRTLRDLAGNLGCHLLGDGSIAVTHVSSLKSANA
Ga0302176_1010280113300030057PalsaMKHTSGDLADKLGCRLLGDSSANVTNVSSLPSATSDSLVFVETPQHLDRALRSCAAAVIAGDFADVKSADSGAKPLLISA
Ga0311360_1002111313300030339BogMKRTLRDLAGNLGCHLLGDGSIAVTHVSSLRSANHE
Ga0310037_1013531123300030494Peatlands SoilMKRTLRDLAEQLGCRLLGDSSVTVTSVSSLQSATTEDLVFVEDVQYLDTAL
Ga0302275_1009321733300030518BogMSQTLRSLAEKLGCHLLGEPSVTVSRVASLQSATSGTLVFVEDAQHLDVALQSEAA
Ga0311356_1152345223300030617PalsaMNQTLRDLAEKLGCRLLGDGSITVTSVSSLQSATNRSLVFAEDVPNLNLALGSPAAAV
Ga0311354_1013603553300030618PalsaMKHTSGDLADKLGCRLLGDSSANVTNVSSLPSATSDSLVF
Ga0311354_1048430523300030618PalsaMNRTLRDLVEQLGCQLLGDGSLTVSSVSSLPSATSDSLVFVEDARHLDLALASSATAVIAGDF
Ga0265762_107061623300030760SoilMKQTLRELAEKLNCHLLGDSSITVTAVSSLPSATSASLVFVEDAQHLDHALRSLAAAVIV
Ga0170834_10976349223300031057Forest SoilMKQSLRSLAEKLGCRLIGTGSITVTAVASLQSANKESLVFVED
Ga0302324_10064450433300031236PalsaMKQTLRDLAEKLGCHLLGDASITVTTVSSLQSATSESVVFV
Ga0265340_1022084213300031247RhizosphereMKQTLRYLAEKLGCRLLGDSSITVTSVSSLRSATSQSLVFVDDAQYLDGALRSSAAALIAGEF
Ga0302320_1094866723300031524BogMSQTLRSLAEKLGCHLLGDPSVTVSRVSSLQSATSDSLVFVDDAQHLDAAI
Ga0310686_10204035923300031708SoilMKQTLNDLAEKLGCHIIGDGSITVTTVSSPHSATSDSLVFVEDPQYLEAALHSPAA
Ga0307469_1099601213300031720Hardwood Forest SoilMNRTLRDLAEKLGCHLLGDSSLAVTNVSSLQSATTDSLVFTEDAPHLDTALRSAAAAVI
Ga0307469_1233055823300031720Hardwood Forest SoilMKQTLRDLAKMLGCHLFGDGSITVSSVSSLQSATPDSLVFTEDAPHLDIALRSAAAAVIVGDFA
Ga0307472_10045676913300032205Hardwood Forest SoilMKRTLRDLADKLGCRLLGDGSITVTSISSLQSATNSSLVFVDDAQY
Ga0326727_1075937613300033405Peat SoilMKQTLRDLAEHLGCRLLGDHSITITSVSSLQSALQSAKSDSLVFVEDAQHLGT
Ga0326726_1142347823300033433Peat SoilMKHTLRDLAQQLGGRLVGDGSITVTSVSSLQSANAESIV
Ga0334827_129815_656_8023300034065SoilMSQTLRSLAEKLGCHLLGEPSVTVSRVASLQSATSGTLVFVEDAQHLDV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.