NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F089403

Metagenome Family F089403

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F089403
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 59 residues
Representative Sequence MADPYPAVGSNYRPNIEPSTTNRGLTLTAEQVVALRDLLSHIPDPSKEVVELYDKVKLL
Number of Associated Samples 37
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Viruses
% of genes with valid RBS motifs 49.54 %
% of genes near scaffold ends (potentially truncated) 18.35 %
% of genes from short scaffolds (< 2000 bps) 87.16 %
Associated GOLD sequencing projects 35
AlphaFold2 3D model prediction Yes
3D model pTM-score0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Duplodnaviria (33.945 % of family members)
NCBI Taxonomy ID 2731341
Taxonomy All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine
(37.615 % of family members)
Environment Ontology (ENVO) Unclassified
(77.982 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(70.642 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 27.59%    β-sheet: 0.00%    Coil/Unstructured: 72.41%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF03819MazG 22.94
PF00011HSP20 12.84
PF03796DnaB_C 8.26
PF00487FA_desaturase 5.50
PF11623NdhS 4.59
PF04965GPW_gp25 1.83
PF02540NAD_synthase 1.83
PF01126Heme_oxygenase 1.83
PF03721UDPG_MGDP_dh_N 1.83
PF00586AIRS 0.92
PF03104DNA_pol_B_exo1 0.92
PF00154RecA 0.92
PF01808AICARFT_IMPCHas 0.92
PF02769AIRS_C 0.92
PF137592OG-FeII_Oxy_5 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 12.84
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 8.26
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 8.26
COG1398Fatty-acid desaturaseLipid transport and metabolism [I] 5.50
COG3239Fatty acid desaturaseLipid transport and metabolism [I] 5.50
COG0171NH3-dependent NAD+ synthetaseCoenzyme transport and metabolism [H] 1.83
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 1.83
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 1.83
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 1.83
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 1.83
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 1.83
COG3230Heme oxygenaseInorganic ion transport and metabolism [P] 1.83
COG5398Heme oxygenaseCoenzyme transport and metabolism [H] 1.83
COG0138AICAR transformylase/IMP cyclohydrolase PurHNucleotide transport and metabolism [F] 0.92
COG0417DNA polymerase B elongation subunitReplication, recombination and repair [L] 0.92
COG0468RecA/RadA recombinaseReplication, recombination and repair [L] 0.92


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms69.72 %
UnclassifiedrootN/A30.28 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001953|GOS2231_1036295All Organisms → Viruses → Predicted Viral1759Open in IMG/M
3300001964|GOS2234_1009577All Organisms → Viruses → Predicted Viral1713Open in IMG/M
3300001969|GOS2233_1068810All Organisms → Viruses → Predicted Viral1822Open in IMG/M
3300006166|Ga0066836_10155354All Organisms → Viruses → Predicted Viral1347Open in IMG/M
3300006166|Ga0066836_10348477Not Available890Open in IMG/M
3300006166|Ga0066836_10481658All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae750Open in IMG/M
3300006315|Ga0068487_1120819All Organisms → cellular organisms → Bacteria → Terrabacteria group681Open in IMG/M
3300006315|Ga0068487_1189132Not Available897Open in IMG/M
3300006315|Ga0068487_1330596All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Bellamyvirus sp.821Open in IMG/M
3300006327|Ga0068499_1053715All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Synechococcus phage S-SM24233Open in IMG/M
3300006327|Ga0068499_1188379All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae533Open in IMG/M
3300006327|Ga0068499_1313275All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Eurybiavirus → unclassified Eurybiavirus → Eurybiavirus sp.841Open in IMG/M
3300006332|Ga0068500_1361760Not Available1012Open in IMG/M
3300006412|Ga0099955_1009624All Organisms → Viruses → Predicted Viral2233Open in IMG/M
3300006412|Ga0099955_1039227All Organisms → Viruses797Open in IMG/M
3300006412|Ga0099955_1258613All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae516Open in IMG/M
3300006751|Ga0098040_1004294Not Available5415Open in IMG/M
3300007283|Ga0066366_10274850Not Available710Open in IMG/M
3300007283|Ga0066366_10490597All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae542Open in IMG/M
3300007963|Ga0110931_1169340All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Bellamyvirus sp.655Open in IMG/M
3300008740|Ga0115663_1038191All Organisms → Viruses → Predicted Viral1556Open in IMG/M
3300009703|Ga0114933_10032815All Organisms → Viruses → Predicted Viral3920Open in IMG/M
3300011013|Ga0114934_10256675All Organisms → Viruses796Open in IMG/M
3300011013|Ga0114934_10272640Not Available767Open in IMG/M
3300012953|Ga0163179_10079996All Organisms → Viruses → Predicted Viral2318Open in IMG/M
3300012953|Ga0163179_10149780All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1743Open in IMG/M
3300012954|Ga0163111_12622344Not Available514Open in IMG/M
3300017757|Ga0181420_1028855All Organisms → Viruses → Predicted Viral1827Open in IMG/M
3300017757|Ga0181420_1212959All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae557Open in IMG/M
3300017760|Ga0181408_1095732Not Available775Open in IMG/M
3300017760|Ga0181408_1202182All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Candidatus Poseidoniia → Candidatus Poseidoniales → unclassified Candidatus Poseidoniales → Candidatus Poseidoniales archaeon504Open in IMG/M
3300020353|Ga0211613_1024224All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1405Open in IMG/M
3300020410|Ga0211699_10297779Not Available628Open in IMG/M
3300020410|Ga0211699_10386120All Organisms → cellular organisms → Bacteria → Terrabacteria group553Open in IMG/M
3300020410|Ga0211699_10387129All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae552Open in IMG/M
3300020410|Ga0211699_10435960Not Available520Open in IMG/M
3300020411|Ga0211587_10134491All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1056Open in IMG/M
3300020411|Ga0211587_10475629Not Available501Open in IMG/M
3300020428|Ga0211521_10237469All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae823Open in IMG/M
3300020428|Ga0211521_10393236All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300020460|Ga0211486_10399357Not Available589Open in IMG/M
3300020460|Ga0211486_10475685Not Available533Open in IMG/M
3300020470|Ga0211543_10154630All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1150Open in IMG/M
3300020472|Ga0211579_10024785All Organisms → Viruses → Predicted Viral3883Open in IMG/M
3300020472|Ga0211579_10064935All Organisms → Viruses → Predicted Viral2234Open in IMG/M
3300020472|Ga0211579_10067425All Organisms → Viruses → Predicted Viral2187Open in IMG/M
3300020472|Ga0211579_10077559All Organisms → Viruses → Predicted Viral2015Open in IMG/M
3300020472|Ga0211579_10133241All Organisms → Viruses → Predicted Viral1471Open in IMG/M
3300020472|Ga0211579_10142808All Organisms → Viruses → Predicted Viral1412Open in IMG/M
3300020472|Ga0211579_10170944All Organisms → Viruses → Predicted Viral1272Open in IMG/M
3300020472|Ga0211579_10237058All Organisms → Viruses → Predicted Viral1052Open in IMG/M
3300020472|Ga0211579_10251270All Organisms → Viruses → Predicted Viral1017Open in IMG/M
3300020472|Ga0211579_10338314All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Bellamyvirus sp.857Open in IMG/M
3300020472|Ga0211579_10430861All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium746Open in IMG/M
3300020472|Ga0211579_10446619Not Available731Open in IMG/M
3300020472|Ga0211579_10536945All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Synechococcus phage S-SM2658Open in IMG/M
3300020472|Ga0211579_10629861All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae600Open in IMG/M
3300020472|Ga0211579_10735631Not Available548Open in IMG/M
3300020472|Ga0211579_10745448Not Available543Open in IMG/M
3300020478|Ga0211503_10115267All Organisms → Viruses → Predicted Viral1573Open in IMG/M
3300020478|Ga0211503_10124297All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1502Open in IMG/M
3300020478|Ga0211503_10192672All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1151Open in IMG/M
3300020478|Ga0211503_10231328All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1029Open in IMG/M
3300020478|Ga0211503_10259525Not Available960Open in IMG/M
3300020478|Ga0211503_10288823All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae899Open in IMG/M
3300020478|Ga0211503_10407841All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae728Open in IMG/M
3300020478|Ga0211503_10440493All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae694Open in IMG/M
3300020478|Ga0211503_10472119Not Available665Open in IMG/M
3300020478|Ga0211503_10497479All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae644Open in IMG/M
3300020478|Ga0211503_10606222Not Available569Open in IMG/M
3300020478|Ga0211503_10657465All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Candidatus Poseidoniia → Candidatus Poseidoniales → unclassified Candidatus Poseidoniales → Candidatus Poseidoniales archaeon541Open in IMG/M
3300020478|Ga0211503_10675564All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Synechococcus phage S-SSM7531Open in IMG/M
3300021085|Ga0206677_10389997All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Candidatus Poseidoniia → Candidatus Poseidoniales → unclassified Candidatus Poseidoniales → Candidatus Poseidoniales archaeon530Open in IMG/M
3300021185|Ga0206682_10009371All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae7084Open in IMG/M
3300021185|Ga0206682_10054845All Organisms → Viruses → Predicted Viral2152Open in IMG/M
3300021185|Ga0206682_10230212All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae831Open in IMG/M
3300025096|Ga0208011_1032563Not Available1272Open in IMG/M
3300026321|Ga0208764_10240990Not Available885Open in IMG/M
3300026321|Ga0208764_10432274Not Available614Open in IMG/M
3300027906|Ga0209404_11042522All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae561Open in IMG/M
3300031773|Ga0315332_10024603All Organisms → Viruses → Predicted Viral3710Open in IMG/M
3300031773|Ga0315332_10454545Not Available812Open in IMG/M
3300031773|Ga0315332_10820586Not Available563Open in IMG/M
3300031774|Ga0315331_10351437All Organisms → Viruses → Predicted Viral1082Open in IMG/M
3300031774|Ga0315331_10535758Not Available845Open in IMG/M
3300031775|Ga0315326_10164022All Organisms → Viruses → Predicted Viral1460Open in IMG/M
3300032006|Ga0310344_10100537All Organisms → Viruses → Predicted Viral2402Open in IMG/M
3300032006|Ga0310344_10150023All Organisms → Viruses → Predicted Viral1968Open in IMG/M
3300032006|Ga0310344_10163368All Organisms → Viruses → Predicted Viral1885Open in IMG/M
3300032006|Ga0310344_10331545All Organisms → Viruses → Predicted Viral1303Open in IMG/M
3300032006|Ga0310344_10338296All Organisms → Viruses → Predicted Viral1289Open in IMG/M
3300032006|Ga0310344_10679255All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae878Open in IMG/M
3300032006|Ga0310344_10737260Not Available838Open in IMG/M
3300032006|Ga0310344_10871999All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales760Open in IMG/M
3300032006|Ga0310344_11044273All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Bellamyvirus sp.684Open in IMG/M
3300032006|Ga0310344_11122353All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae655Open in IMG/M
3300032006|Ga0310344_11144069Not Available648Open in IMG/M
3300032006|Ga0310344_11194769Not Available631Open in IMG/M
3300032006|Ga0310344_11202014Not Available629Open in IMG/M
3300032006|Ga0310344_11230511All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Candidatus Poseidoniia → Candidatus Poseidoniales → unclassified Candidatus Poseidoniales → Candidatus Poseidoniales archaeon620Open in IMG/M
3300032006|Ga0310344_11373633Not Available580Open in IMG/M
3300032006|Ga0310344_11467800Not Available557Open in IMG/M
3300032006|Ga0310344_11641210Not Available521Open in IMG/M
3300032006|Ga0310344_11735265Not Available503Open in IMG/M
3300032011|Ga0315316_10021853All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae4928Open in IMG/M
3300032011|Ga0315316_10230062All Organisms → Viruses → Predicted Viral1550Open in IMG/M
3300032011|Ga0315316_10638366All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Bellamyvirus sp.887Open in IMG/M
3300032011|Ga0315316_10673189All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales860Open in IMG/M
3300032032|Ga0315327_10101117All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1774Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine37.61%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater16.51%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater13.76%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine11.93%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine6.42%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.67%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine2.75%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface2.75%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.83%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater0.92%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.92%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.92%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001953Marine microbial communities from Key West, Florida, USA - GS015EnvironmentalOpen in IMG/M
3300001964Marine microbial communities from Rosario Bank, Honduras - GS018EnvironmentalOpen in IMG/M
3300001969Marine microbial communities from Yucatan Channel, Mexico - GS017EnvironmentalOpen in IMG/M
3300006166Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91EnvironmentalOpen in IMG/M
3300006315Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_0770mEnvironmentalOpen in IMG/M
3300006327Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0125mEnvironmentalOpen in IMG/M
3300006332Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0200mEnvironmentalOpen in IMG/M
3300006412Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0125mEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300007283Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_250_ad_252m_LV_BEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008740Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 250-2.7um, replicate aEnvironmentalOpen in IMG/M
3300009703Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaGEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300012954Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaGEnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300020353Marine microbial communities from Tara Oceans - TARA_B100000686 (ERX556093-ERR598998)EnvironmentalOpen in IMG/M
3300020410Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)EnvironmentalOpen in IMG/M
3300020411Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)EnvironmentalOpen in IMG/M
3300020428Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)EnvironmentalOpen in IMG/M
3300020460Marine microbial communities from Tara Oceans - TARA_A100001037 (ERX555931-ERR599097)EnvironmentalOpen in IMG/M
3300020470Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)EnvironmentalOpen in IMG/M
3300020472Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)EnvironmentalOpen in IMG/M
3300020478Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)EnvironmentalOpen in IMG/M
3300021085Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300025096Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026321Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91 (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300031773Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915EnvironmentalOpen in IMG/M
3300031774Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915EnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M
3300032006Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MGEnvironmentalOpen in IMG/M
3300032011Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416EnvironmentalOpen in IMG/M
3300032032Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GOS2231_103629533300001953MarineMAKTDPYPAVGTNYRPNFQPSTTNRSVTLTKEQVEELKDILGGVVDPSQNIVKL
GOS2234_100957723300001964MarineMADPYPALGSDYRPKIETYTTNRGLTLTAEEVVALRDLLSHVPDPSNEVISLYDKVKLL*
GOS2233_106881043300001969MarineMSDPYPAVGSNYRPNFQPTTTNRGLTLTAEEVVALKDLLSHIPDPSNEVVSLYDKVKLL*
Ga0066836_1015535423300006166MarineMTKKDPYPALGSNYRPPIETYTTNRGLTLTAEQVVALRDILSHIPDPSNEVVELYDKVKLL*
Ga0066836_1034847723300006166MarineMADPYPALGSNYRPPIETYTTNRGLTLTAEEVVALRDLLSHVPDPSNEIVQLYDKVKLL*
Ga0066836_1048165823300006166MarineMADPYPAIGSNYRPNIEPSTTNRGLTLTAEEVVALRDLLSHIPDPSKEVVSLYDKVKLL*
Ga0068487_112081923300006315MarineMADPYPALGSNYRPPIETYTTNRGLTLTAEQVVALRDILSHIPDPSKEVVELYDKVKLL*
Ga0068487_118913223300006315MarineMADPYPALGSDYRPPIETYTTNRGLTLTAEEVVSLRDLLSHIPDPSKEVVEIYDKVKLL*
Ga0068487_133059623300006315MarineMADPYPAVGSNYRPPIEPSTTNRGLTLTAEQVVALRDILSHIPDPSKEVVELYDKVKLL*
Ga0068499_105371543300006327MarineMADPYPAVGTNYRPNFEPATTNRGLTLTAEQVVALRELLSHVPNPSKEVIDLYDKVNQL*
Ga0068499_118837923300006327MarineMADPYPALGSDYRPPIETYTTNRGLTLTAEEVVALRDLLSHVPDPSNEIVSLYDKVKVL*
Ga0068499_131327513300006327MarineMADPYPAIGSNYRPNIEPSTTNRGLTLTAEEVVSLRDLLSHVPDPSKEVVSLYDKVKLL*
Ga0068500_136176013300006332MarineMADPYPALGSDYRPPIETYTTNRGLTLTAEEVVALRDLLSHVPDPSSEIVSLYDKVKVL*
Ga0099955_100962443300006412MarineMADPYPAVGSNYRPPIQPSTTNRGLCLTAEQVVALRDLLSHVPDPSKEIVELYDKVKLL*
Ga0099955_103922723300006412MarineMTSNSDPYPALGSNYREPIETYTTNRGLTLTAEEVVVLRDLLSHVPDPSSEVVSLYDKVKVL*
Ga0099955_125861333300006412MarineMTDPYPAIGSNYRPNIEPSTTNRGLTLTAEEVVALRDLLSHVPDPSKEVVDLY
Ga0098040_100429473300006751MarineMADPYPALGSDYRPPIETYTTNRGLTLTAEEVVLLRDLLSHVPDPSNEVISLYDKVKPPFHL*
Ga0066366_1027485023300007283MarineMADPYPAIGSNYRPNFEPTTTNRGLTLTAEQVVALRDLLSHAPDPSKEIVELYDKVKLL*
Ga0066366_1049059723300007283MarineMADPYPALGSDYRPPIETYTTNRGLTLTAEEVVALRDLLSHVPDPSNEIVSLYDKVKIL*
Ga0110931_116934023300007963MarineMADPYPAVGTHYRPNFEPATTNRGLTLTAEQVVALRDILSHVPNPSKEVIDLYDKVNQL*
Ga0115663_103819123300008740MarineMADPYPAIGSNYRPPIETYTTNRGLTLTAEEVVALRDLLSHVPDPSNEVVQLYDKVKLL*
Ga0114933_1003281553300009703Deep SubsurfaceMTDPYPALGSDYRPPIETYTTNRGLTLTAEQVVELKELLAHVPNPSDNIVKLYDVVSKL*
Ga0114934_1025667533300011013Deep SubsurfaceALGSNYREPIETYTTNRGLTLTAEEVVVLRDLLSHVPDPSSEVVSLYDKVKVL*
Ga0114934_1027264023300011013Deep SubsurfaceMADPYPAVGSNYRPNFEPSTTNRGLTLTAEQVVALREILSHIPDPSKEVVELYDKVKLL*
Ga0163179_1007999623300012953SeawaterMADPYPAVGTNYRPNFEPATTNRGLTLTAEQAVALRDILSHVPNPSKEVIDLYDKVNQL*
Ga0163179_1014978013300012953SeawaterMADPYPAVGTNYRPNFEPATTNRGLTLTAEQVVVLKDILSHIPDPVKEVVELYEKVNQL*
Ga0163111_1262234423300012954Surface SeawaterMADPYPAIGSDYRPPIKTYTTNRGLTLTAEEVVALRDLLSHVPDPSNEIVSLYDKVKLL*
Ga0181420_102885513300017757SeawaterTHYRPNFEPATTNRGLTLTAEQVVALRDILSHVPNPSKEVIDLYDKVNQL
Ga0181420_121295923300017757SeawaterMTSNSDPYPALGSNYREPIETYTTNRGLTLTAEEVVVLRDLLSHVPDPSSEVVSLYNKVTLL
Ga0181408_109573223300017760SeawaterMADPYPAVGSNYRPNIEPSTTNRGLTLTAEEVVELKELLSHVPNPSSNIINLYDKVNLL
Ga0181408_120218223300017760SeawaterMADPYPAVGTNYRPNFEPATTNRGLTLTAEQVVVLRELLSHAPNPSKEIIELYDKVNQLXASKLILI
Ga0211613_102422433300020353MarineMADPYPAVGSNYRPNIEPSTTNRGLTLTAEQVVVLRDILSHIPDPSKEVVELYDKVKLL
Ga0211699_1029777923300020410MarineMADPYPALGSNYRPPIETYTTNRGLTLTAEEVVALRDLLSHVPDPSNEIVSLY
Ga0211699_1038612023300020410MarineMADPYPALGSNYRPPIETYTTNRGLTLTAEQVVALRDILSHIPDPSKEVVELYDKVKLL
Ga0211699_1038712923300020410MarineMADPYPALGSDYRPKIETYTTNRGLTLTAEEVVALRDILSHIPDPSKEVVSIYDKVKLL
Ga0211699_1043596023300020410MarineMTDPYPAVGSNYRPNIEPSTTNRGLTLTAEQVVALRDILSHIPDPSKEVVELYDKVKLL
Ga0211587_1013449143300020411MarineMLQYQEVNKKTMADPYPAIGTNYRPNFQPSTTNRSITLTAEQVVALRDILSHIPDPSKEVVELYDKVKIL
Ga0211587_1047562913300020411MarinePYPAVGSNYRPNIEPSTTNRGLTLTAEEVVALRDLLSHVPDPSNEIVSLYDKVKLL
Ga0211521_1023746923300020428MarineMAKTDPYPAIGSDYRPPIQPSTTNRGLCLTAEQVVALRDLLSHVPDPSKEIVELYDKVKL
Ga0211521_1039323623300020428MarineMTDPYPAVGSNYRPNTETYTTNRGLTLTAEQVVALRDILKHIPDPSKEVVELYDKVKLL
Ga0211486_1039935723300020460MarineMADPYPAIGSNYRPNIEPSTTNRGLTLTAEEVVALRDLLSHVPDPSNEVVSLYDKVKLL
Ga0211486_1047568523300020460MarineMADPYPAVGTNYRPNFEPATTNRGLTLTAEQVVALRELLSHVPNPSKEVIELYDKVT
Ga0211543_1015463013300020470MarinePYPAVGTNYRPNIEPSTTNRGLTLTAEQVVALRDILSHIPDPSKEVVELYDKVKIL
Ga0211579_1002478553300020472MarineMANTDPYPAVGSNYRPNIEPSTTNRGLTLTAEQVVALRDILSHIPDPSKEVVELYDKVKL
Ga0211579_1006493563300020472MarineMTDPYPAIGSDYRPPIQPSTTNRGLHLTAEQVVALRDILSHIPDPSKEVVELYDKVKLL
Ga0211579_1006742523300020472MarineMADPYPAVGSNYRPPIQPSTTNRGLCLTAEQVVALRDLLSHVPDPSKEIVELYDKVKLL
Ga0211579_1007755943300020472MarineMADPYPAVGSNYRPNIEPSTTNRGLTLTAEQVVALRDLLSHVPDPSREIVELYDKVKLL
Ga0211579_1013324123300020472MarineMTKKDPYPALGSNYRPPIETYTTNRGLTLTAEQVVALRDILSHIPDPSNEVVELYDKVKL
Ga0211579_1014280823300020472MarineMADPYPAVGSNYRPPIQPSTTNRGLCLTAEQVVALRDLLSHVPDPSAEIVELYDKVKLL
Ga0211579_1017094423300020472MarineMTDPYPAVGTNYRPNFEPATTNRGLTLTSEQVVVLRDLLSHVTNPSREVIDLYDKVNQL
Ga0211579_1023705823300020472MarineMADPYPAVGSNYRPPIEPSTTNRGLTLTAEQVVALRDLLSHIPDPSKEVVELYDKVKLL
Ga0211579_1025127023300020472MarineMADPYPAIGSNYRPNFQPTTTNRGLTLTAEQVVALRDLLSHVPDPSKEIVELYDKVKLL
Ga0211579_1033831423300020472MarineMTDPYPALGSDYRPPIETYTTNRGLTLTAEQVVELKELLAHVPNPSDNIVKLYDVVSKL
Ga0211579_1043086133300020472MarineMADPYPAVGSNYRPNFEPTTTNRGLTLTAEQVVALRDILSHIPDPSKEVVELYDKVKLL
Ga0211579_1044661913300020472MarineTKKLALFKMADPYPAVGSNYRPNFEPSTTNRGLTLTAEQVVALREILSHIPDPSKEVVELYDKVKLL
Ga0211579_1053694523300020472MarineMADPYPAVGTNYRPNFEPATTNRGLTLTAEQVVVLKDILSHIPDPVKEVVELYEKVNQL
Ga0211579_1062986123300020472MarineMADPYPAIGSNYRPNIEPSTTNRGLTLTAEEVVALRDLLSHIPDPSKEVVSLYDKVKLL
Ga0211579_1073563123300020472MarineMADPYPAVGTNYRPNFEPATTNRGLTLTAEQVVALRELLSHVPNPSKEVIDLYDKVNQL
Ga0211579_1074544823300020472MarineMADPYPAVGSNYRPNIEPSTTNRGLTLTAEQVVALRDILSHIPDPSKEVVELYDKVKLL
Ga0211503_1011526723300020478MarineMADPYPAVGSHYRPNIEPSTTNRGLTLTAEQVVALRDILSHIPDPSKEVVELYDKVKLL
Ga0211503_1012429753300020478MarinePAVGSNYRPPIQPSTTNRGLCLTAEQVVALRDLLSHVPDPSKEIVELYDKVKLL
Ga0211503_1019267213300020478MarineMADPYPAVGSNYRPNIEPSTTNRGLTLTAEEVVALRDLLSHVPDPSNEIV
Ga0211503_1023132823300020478MarineMADPYPAVGTNYRPNFEPATTNRGLTLTAEQVVALRELLSHVPNPSKEVIELYDKVTQL
Ga0211503_1025952523300020478MarineMADPYPAIGSNYRPPIKPSTTNRGLTLTAEEVVALRDILSHIPDPSNEVVSLYDKVKLL
Ga0211503_1028882333300020478MarineMADPYPALGSNYRPPIETYTTNRGLTLTAEEVVALRDLLSHVPDPSNEIVQLYDKVKIL
Ga0211503_1040784113300020478MarineIGTNYRPNIEPSTTNRGLTLTAEQVVALKDLLSHVPDPSKEIVDLYDKVKIL
Ga0211503_1044049323300020478MarineMADPYPALGSNYRPTIETYTTNRGLTLTAEEVVALKDLLSHIPDPSKEVVSVYDKVKIL
Ga0211503_1047211933300020478MarineMADPYPALGSDYRPKIETYTTNRSITLTAEQVVALRDILSHIPDPSKEVVELYDKVKIL
Ga0211503_1049747923300020478MarineMAKKDPYPAIGTNYRPPIETYTTNRGLTLTAEQVVALRDLLGKVVDPSKEIIELYDKVKL
Ga0211503_1060622213300020478MarineMADPYPALGSDYRPPIETYTTNRGLTLTAEEVVALRDLLSHVPDPSSEIVSLYDKVKVL
Ga0211503_1065746523300020478MarineMADPYPAIGTHYRPNIETYTTNRGLTLTAEQVVELKELLAHVPNPSDNIVKLYDVVSKL
Ga0211503_1067556423300020478MarineMTKKDPYPAIGTNYRPNIETYTTNRGLTLTAEQVVALRDLLAHVPDPSKEIIELYDKVKL
Ga0206677_1038999723300021085SeawaterMADPYPAVGTHYRPNFEPATTNRGLTLTAEQVVALRDILSHVPNPSKEVIDLYDKVNQL
Ga0206682_10009371113300021185SeawaterMADPYPAVGTHYRPNFEPATTNRGLTLTAEQVVVLRELLSHAPNPSKEIIELYDKVNQL
Ga0206682_1005484533300021185SeawaterMADPYPAVGTNYRPNFEPATTNRGLTLTVEQVVSLRDILSHVPNPSKEVIDLYDKVNQL
Ga0206682_1023021223300021185SeawaterMADPYPAVGSNYRPNIEPSTTNRGLTLTAEQVVALRDLLSHIPDPSKEVVELYDKVKLL
Ga0208011_103256343300025096MarineMADPYPALGSDYRPPIETYTTNRGLTLTAEEVVLLRDLLSHVPDPSNEVISLYDKVKPPFHL
Ga0208764_1024099023300026321MarineKDPYPALGSNYRPPIETYTTNRGLTLTAEQVVALRDILSHIPDPSNEVVELYDKVKLL
Ga0208764_1043227423300026321MarineMADPYPAIGSNYRPPIETYTTNRGLTLTAEEVVALRDLLSHVPDPSNEIVQLYDKVKLL
Ga0209404_1104252233300027906MarineMTDPYPAVGSNYRPPIEPSTTNRGLTLTAEQVVALRDLLSHVPDPSKEIVELYDKVKVL
Ga0315332_1002460333300031773SeawaterMADPYPAVGTNYRPNFEPATTNRGLTLTSEQVVVLKDILSHIPDPVKEVVELYEKVNQL
Ga0315332_1045454513300031773SeawaterMADPYPAVGTNYRPNIETYTTNRGLTLTAEEVVELCNILSHIPNPSKEVISLYDKLKLL
Ga0315332_1082058623300031773SeawaterMADPYPAVGSNYRPPIETYTTNRGLTLTAEQVVALRDILSHIPDPSKEVVELYDKVKLL
Ga0315331_1035143723300031774SeawaterMADPYPAIGTNYRAPIEPSTTNRSVTLTAEQVVALRDILSHIPDPSNEVVELYDKVKLL
Ga0315331_1053575823300031774SeawaterMADPYPAVGSNYRPPIEPSTTNRGLTLTAEQVVSLRDILSHIPDPTKDVIELYDKVKLL
Ga0315326_1016402213300031775SeawaterMADPYPAVGTHYRPNFEPATTNRGLTLTAEQVVALRDILSHVPNPSKE
Ga0310344_1010053753300032006SeawaterMKIMADPYPAIGTHYRPNIEPSTTNRGLTLTAEQVVALRDILSHIPDPSKEVVELYDKVKLL
Ga0310344_1015002343300032006SeawaterMANTDPYPAVGSNYRPNIEPSTTNRGLTLTVEQVVALRDILSHIPDPSKEVVELYDKVKL
Ga0310344_1016336823300032006SeawaterMAKTDPYPAIGSNYRPPIQPSTTNRGLCLTAEQVVALRDLLSHVPDPSTEIVELYDKVKL
Ga0310344_1033154543300032006SeawaterMTDPYPAVGSNYRPNFQPSTTNRGLTLTAEEVVVLRDLLSHIPDPGKEVVSLYDKVKLL
Ga0310344_1033829623300032006SeawaterMADPYPAIGSNYRPPIKPSTTNRGLTLTAEEVVELRELLSHIPDPSPNIVKLYDKVNLL
Ga0310344_1067925513300032006SeawaterMADPYPAIGSNYRPNIEPSTTNRGLTLTAEQVVALRDILSHIPDPSKEVVELYDKVKLL
Ga0310344_1073726023300032006SeawaterMADPYPALGSNYRPPIETYTTNRGLTLTAEEVVALRDLLSHVPDPSNEIVSLYNKVSVL
Ga0310344_1087199923300032006SeawaterMADPYPALGSDYRPPIETYTTNRGLTLTAEEVVALRDLLSHVPDPSKEIVQLYDKVKLL
Ga0310344_1104427323300032006SeawaterMADPYPAIGTNYRDPILPSTTNRGLTLTAEQVVALRDILSHIPDPSKEVVELYDKVKLL
Ga0310344_1112235323300032006SeawaterMADPYPALGSDYRPKIETYTTNRGLTLTAEEVVALRNILSHIPDPSKEVVSIYDKVKLL
Ga0310344_1114406923300032006SeawaterMADPYPALGSDYRPPIETYTTNRGLTLTAEEVIVLRDLLSHVPDPNKEVVSLYDKVKLL
Ga0310344_1119476923300032006SeawaterKTDPYPAIGSNYRPPIQPSTTNRGLCLTAEQVVALRDLLSHVPDPSKEIVELYDKVKLL
Ga0310344_1120201423300032006SeawaterMADPYPALGSDYRPKIETYTTNRGLTLTAEEVVALRDLLSHVPDPSNEIVS
Ga0310344_1123051123300032006SeawaterMADPYPAVGTNYRPNFEPATTNRGLTLTAEQVVALRELLSHVPNPSKEVIELYDKVNQL
Ga0310344_1137363313300032006SeawaterMADPYPALGSDYRPKIETYTTNRGLTLTAEEVVALRDLLSHVPDPSKEVVSLYDKVKIL
Ga0310344_1146780023300032006SeawaterMADPYPALGSDYRPPIETYTTNRGLTLTAEEVVALRDLLSHVPDPSKEIIALYDKVKLL
Ga0310344_1164121023300032006SeawaterKVFCRIQILTMADPYPAVGSNYRPPIQPSTTNRGLCLTAEQVVALRDLLSHVPDPSKEIVELYDKVKLL
Ga0310344_1173526513300032006SeawaterMADPYPAIGSNYRPNIEPSTTNRGLTLTAEEVVALRDLLSHVPDPSNEIVSLYDKVKIL
Ga0315316_1002185383300032011SeawaterMADPYPAVGTNYRPPIEPSTTNRGLTLTAEQVVSLRDILSHIPDPTKDVIELYDKVKLL
Ga0315316_1023006213300032011SeawaterMADPYPAVGTNYRPNIETYTTNRGLTLTAEEVVELCNILSHIPNPSKEVISLYDKLKQL
Ga0315316_1063836613300032011SeawaterMADPYPALGSNYRPPIETYTTNRGLTLTAEQVVALRDLLSHIPDPSKEVVELYDKVKLL
Ga0315316_1067318923300032011SeawaterMADPYPAVGTHYRPNFEPATTNRGLTLTAEQVVVLREILSHAPNPSKEIIELYDKVNQL
Ga0315327_1010111733300032032SeawaterMADPYPAVGTNYRPPIEPSTTNRGLTLTAEQVVALRDILSHIPDPSKEVVELYDKVKLL


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