NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F089419

Metagenome Family F089419

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F089419
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 52 residues
Representative Sequence MKHIILKVLDRHKNSQFNMASKSAREMLATEIEAVLIQDEQVRQITRELYKGEG
Number of Associated Samples 88
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 59.63 %
% of genes near scaffold ends (potentially truncated) 27.52 %
% of genes from short scaffolds (< 2000 bps) 91.74 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (74.312 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(49.541 % of family members)
Environment Ontology (ENVO) Unclassified
(79.817 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(98.165 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 48.78%    β-sheet: 0.00%    Coil/Unstructured: 51.22%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.67
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF08406CbbQ_C 11.01
PF00565SNase 10.09
PF00085Thioredoxin 8.26
PF02810SEC-C 5.50
PF03851UvdE 3.67
PF13589HATPase_c_3 0.92
PF07432Hc1 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG0714MoxR-like ATPaseGeneral function prediction only [R] 11.01
COG4294UV DNA damage repair endonucleaseReplication, recombination and repair [L] 3.67


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A74.31 %
All OrganismsrootAll Organisms25.69 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10048551All Organisms → Viruses → Predicted Viral2141Open in IMG/M
3300001450|JGI24006J15134_10064930All Organisms → Viruses → Predicted Viral1425Open in IMG/M
3300004097|Ga0055584_102619646Not Available507Open in IMG/M
3300005057|Ga0068511_1045578Not Available710Open in IMG/M
3300005400|Ga0066867_10334652Not Available540Open in IMG/M
3300005404|Ga0066856_10389378Not Available597Open in IMG/M
3300005430|Ga0066849_10292277Not Available623Open in IMG/M
3300005605|Ga0066850_10046406Not Available1730Open in IMG/M
3300005934|Ga0066377_10297776Not Available500Open in IMG/M
3300006164|Ga0075441_10138444Not Available921Open in IMG/M
3300006484|Ga0070744_10133259Not Available714Open in IMG/M
3300006484|Ga0070744_10187899Not Available589Open in IMG/M
3300006735|Ga0098038_1026339All Organisms → cellular organisms → Bacteria2189Open in IMG/M
3300006737|Ga0098037_1027369All Organisms → cellular organisms → Bacteria2111Open in IMG/M
3300006738|Ga0098035_1021134All Organisms → Viruses → Predicted Viral2534Open in IMG/M
3300006738|Ga0098035_1040437Not Available1736Open in IMG/M
3300006738|Ga0098035_1255529Not Available576Open in IMG/M
3300006749|Ga0098042_1086015Not Available809Open in IMG/M
3300006749|Ga0098042_1124238Not Available643Open in IMG/M
3300006750|Ga0098058_1132562Not Available663Open in IMG/M
3300006751|Ga0098040_1035635Not Available1579Open in IMG/M
3300006751|Ga0098040_1153755All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300006752|Ga0098048_1031389All Organisms → cellular organisms → Bacteria1728Open in IMG/M
3300006752|Ga0098048_1134344Not Available740Open in IMG/M
3300006793|Ga0098055_1237963Not Available686Open in IMG/M
3300006921|Ga0098060_1041319Not Available1381Open in IMG/M
3300006921|Ga0098060_1042048Not Available1368Open in IMG/M
3300006922|Ga0098045_1026766Not Available1506Open in IMG/M
3300006928|Ga0098041_1123366Not Available835Open in IMG/M
3300006990|Ga0098046_1010334All Organisms → Viruses → Predicted Viral2553Open in IMG/M
3300007992|Ga0105748_10472884Not Available546Open in IMG/M
3300008050|Ga0098052_1167491Not Available864Open in IMG/M
3300009071|Ga0115566_10361812Not Available843Open in IMG/M
3300009593|Ga0115011_11848836All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300009593|Ga0115011_12066583Not Available522Open in IMG/M
3300009790|Ga0115012_11980857Not Available516Open in IMG/M
3300010149|Ga0098049_1165945Not Available681Open in IMG/M
3300010151|Ga0098061_1016082All Organisms → Viruses → Predicted Viral3128Open in IMG/M
3300010151|Ga0098061_1194264Not Available721Open in IMG/M
3300010155|Ga0098047_10071731All Organisms → Viruses → Predicted Viral1357Open in IMG/M
3300012920|Ga0160423_10447513Not Available881Open in IMG/M
3300012936|Ga0163109_10619806Not Available792Open in IMG/M
3300012952|Ga0163180_10893835Not Available703Open in IMG/M
3300017703|Ga0181367_1038920Not Available849Open in IMG/M
3300017704|Ga0181371_1034581Not Available829Open in IMG/M
3300017719|Ga0181390_1166400Not Available546Open in IMG/M
3300017729|Ga0181396_1016466All Organisms → cellular organisms → Bacteria1472Open in IMG/M
3300017730|Ga0181417_1140198Not Available583Open in IMG/M
3300017743|Ga0181402_1014810All Organisms → Viruses → Predicted Viral2291Open in IMG/M
3300017745|Ga0181427_1087473Not Available762Open in IMG/M
3300017745|Ga0181427_1138832Not Available590Open in IMG/M
3300017751|Ga0187219_1150302Not Available671Open in IMG/M
3300017758|Ga0181409_1240138Not Available515Open in IMG/M
3300017775|Ga0181432_1029683Not Available1461Open in IMG/M
3300017781|Ga0181423_1081207All Organisms → cellular organisms → Bacteria1279Open in IMG/M
3300017824|Ga0181552_10558746Not Available535Open in IMG/M
3300017956|Ga0181580_10365746Not Available967Open in IMG/M
3300017956|Ga0181580_11031534Not Available507Open in IMG/M
3300017956|Ga0181580_11038492Not Available505Open in IMG/M
3300017967|Ga0181590_11090672Not Available516Open in IMG/M
3300017986|Ga0181569_10186892All Organisms → Viruses → Predicted Viral1461Open in IMG/M
3300018424|Ga0181591_10574003Not Available811Open in IMG/M
3300020165|Ga0206125_10061108All Organisms → Viruses → Predicted Viral1759Open in IMG/M
3300020175|Ga0206124_10117199Not Available1092Open in IMG/M
3300020379|Ga0211652_10104040Not Available857Open in IMG/M
3300020388|Ga0211678_10317221Not Available632Open in IMG/M
3300020394|Ga0211497_10196813Not Available771Open in IMG/M
3300020408|Ga0211651_10101241Not Available1190Open in IMG/M
3300020411|Ga0211587_10382724Not Available572Open in IMG/M
3300020414|Ga0211523_10335191Not Available617Open in IMG/M
3300020436|Ga0211708_10487125Not Available506Open in IMG/M
3300020439|Ga0211558_10363882Not Available672Open in IMG/M
3300020442|Ga0211559_10333667Not Available705Open in IMG/M
3300020442|Ga0211559_10456929Not Available587Open in IMG/M
3300020449|Ga0211642_10187471Not Available892Open in IMG/M
3300020450|Ga0211641_10130013All Organisms → Viruses → Predicted Viral1279Open in IMG/M
3300020470|Ga0211543_10072487All Organisms → cellular organisms → Bacteria1786Open in IMG/M
3300020470|Ga0211543_10303910Not Available775Open in IMG/M
3300020470|Ga0211543_10381448Not Available678Open in IMG/M
3300021185|Ga0206682_10143012Not Available1135Open in IMG/M
3300021368|Ga0213860_10375104Not Available617Open in IMG/M
3300022074|Ga0224906_1074513Not Available1038Open in IMG/M
(restricted) 3300023109|Ga0233432_10228169Not Available907Open in IMG/M
3300024344|Ga0209992_10273974Not Available695Open in IMG/M
3300024346|Ga0244775_10244517All Organisms → Viruses → Predicted Viral1497Open in IMG/M
3300025070|Ga0208667_1040824All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium784Open in IMG/M
3300025072|Ga0208920_1031003Not Available1116Open in IMG/M
3300025096|Ga0208011_1017831All Organisms → cellular organisms → Bacteria1858Open in IMG/M
3300025096|Ga0208011_1025145Not Available1495Open in IMG/M
3300025096|Ga0208011_1034169All Organisms → Viruses → Predicted Viral1234Open in IMG/M
3300025099|Ga0208669_1064080Not Available815Open in IMG/M
3300025102|Ga0208666_1021826All Organisms → cellular organisms → Bacteria2018Open in IMG/M
3300025108|Ga0208793_1134238Not Available666Open in IMG/M
3300025109|Ga0208553_1144037Not Available525Open in IMG/M
3300025112|Ga0209349_1100025All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300025112|Ga0209349_1100185Not Available828Open in IMG/M
3300025114|Ga0208433_1133381Not Available595Open in IMG/M
3300025120|Ga0209535_1127208Not Available853Open in IMG/M
3300025120|Ga0209535_1149042Not Available741Open in IMG/M
3300025132|Ga0209232_1041591All Organisms → Viruses → Predicted Viral1715Open in IMG/M
3300025151|Ga0209645_1219388Not Available549Open in IMG/M
3300025151|Ga0209645_1245050Not Available504Open in IMG/M
3300025870|Ga0209666_1093129All Organisms → Viruses → Predicted Viral1485Open in IMG/M
3300025873|Ga0209757_10109681All Organisms → cellular organisms → Bacteria849Open in IMG/M
3300025873|Ga0209757_10226777Not Available593Open in IMG/M
3300027714|Ga0209815_1018640Not Available2935Open in IMG/M
3300027906|Ga0209404_10554454Not Available765Open in IMG/M
3300028192|Ga0257107_1216250Not Available542Open in IMG/M
3300028196|Ga0257114_1096398All Organisms → Viruses → Predicted Viral1211Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine49.54%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine15.60%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater10.09%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh6.42%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine2.75%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater1.83%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.83%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.92%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.92%
Marine WaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water0.92%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine0.92%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.92%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater0.92%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.92%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.92%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.92%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine0.92%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.92%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.92%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.92%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300005057Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2umEnvironmentalOpen in IMG/M
3300005400Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261EnvironmentalOpen in IMG/M
3300005404Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205EnvironmentalOpen in IMG/M
3300005430Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69EnvironmentalOpen in IMG/M
3300005605Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67EnvironmentalOpen in IMG/M
3300005934Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_BEnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006484Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535EnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006749Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006922Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300006990Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaGEnvironmentalOpen in IMG/M
3300007992Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2umEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009790Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 MetagenomeEnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012936Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaGEnvironmentalOpen in IMG/M
3300012952Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 MetagenomeEnvironmentalOpen in IMG/M
3300017703Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaGEnvironmentalOpen in IMG/M
3300017704Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaGEnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017729Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11EnvironmentalOpen in IMG/M
3300017730Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13EnvironmentalOpen in IMG/M
3300017743Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17EnvironmentalOpen in IMG/M
3300017745Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017758Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30EnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300017781Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017956Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017986Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020175Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2EnvironmentalOpen in IMG/M
3300020379Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)EnvironmentalOpen in IMG/M
3300020388Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)EnvironmentalOpen in IMG/M
3300020394Marine microbial communities from Tara Oceans - TARA_B000000557 (ERX556068-ERR599026)EnvironmentalOpen in IMG/M
3300020408Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX555963-ERR599118)EnvironmentalOpen in IMG/M
3300020411Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)EnvironmentalOpen in IMG/M
3300020414Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)EnvironmentalOpen in IMG/M
3300020436Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)EnvironmentalOpen in IMG/M
3300020439Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029)EnvironmentalOpen in IMG/M
3300020442Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)EnvironmentalOpen in IMG/M
3300020449Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)EnvironmentalOpen in IMG/M
3300020450Marine microbial communities from Tara Oceans - TARA_B100000575 (ERX555933-ERR599077)EnvironmentalOpen in IMG/M
3300020470Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300021368Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550EnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025072Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025096Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025099Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025102Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025109Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025114Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025870Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300027714Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028192Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500mEnvironmentalOpen in IMG/M
3300028196Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10mEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1004855183300000101MarineMKHLIEKVLNRHRNGQFNMGSESARKMLAAEIEAVLQQNEQIIEIERELYRGEG*
JGI24006J15134_1006493013300001450MarineMRHLILKVLDRYKNGQTNLGSKAAREMIAAEIEAVLIQDEQMKLITKELYKGEG*
Ga0055584_10261964623300004097Pelagic MarineMKHLIEKVLNRHRNGQFNMGSESARKMLAAEIEAVLQQNKQIIEIERELYRGEG*
Ga0068511_104557813300005057Marine WaterMIKDLILKVLDRHKNGQINMSSNSAREMLAIEIEAVLKQNEQIIEIERELYRGEG*
Ga0066867_1033465223300005400MarineMKYLIKKVLDKYKDKQLDFSSDDIREQIASEIEAKLIQNEQIIKIERELYRGEG*
Ga0066856_1038937823300005404MarineMEKVYETLNKKVLDRHKSGQFNMESDAAREMLASEIEAVLIQDKQLQLITK
Ga0066849_1029227723300005430MarineMRHLILKVLNRYKNRQINLGSDSARENLASEIEAVLLQNEQVRKLQRELYKGEG*
Ga0066850_1004640633300005605MarineMKYLIKKVLDKYKDKQLNLGSEAARENLAIEIEAKLIQNEQIIKIERELYRGEG*
Ga0066377_1029777623300005934MarineMKHIILKVLDRHKNSQFNMASKSAREMLATEIEAVLIQDEQVRQITRELYKGEG*
Ga0075441_1013844433300006164MarineMKHLIKKVLDRYKNGQTNLASESAREILAAEIEAVLINDEQVRQVTKEPYKGEG*
Ga0070744_1013325923300006484EstuarineMRHLILKVLDRYKNGQTNLDSKAAREMIAAEIEAVLISNEQVKQITRDLYKGEG*
Ga0070744_1018789913300006484EstuarineHRNGQFNMGSESARKMLAAEIEAVLQQNEQITSIERELYRGEG*
Ga0098038_102633973300006735MarineMKHLIEEVLNRHRNGQFNMSSESARKMLAAEIEAVLQQNKQILEIERELYRGEG*
Ga0098037_102736913300006737MarineMKHLIEEVLNRHRNGQFNMASESARKMLAAEIEAVLQQNKQILEIERELYRGEG*
Ga0098035_102113463300006738MarineMKYLIKKVLDKYKDKQLNLGSESARENLAAEIEARLIQSEHIRQIERALYRGEG*
Ga0098035_104043733300006738MarineMKHLILKVLDRYKDRQINLASETAREQIASEIEAVLIQNEQVRQIQQELYKGEG*
Ga0098035_125552923300006738MarineMKHLILKVLDRYKDRQINLGSETAREQIASEIEAVLIQNEQVRQIRRELYKGEG*
Ga0098042_108601553300006749MarineMKHLIEEVLNRHRNGQFNMASESARKMLAAEIEAVLQQHEQIISIERELYRGEG*
Ga0098042_112423823300006749MarineMKHLIKKVLDRHKSGQFNMESDAAREMLATEIEAVLIQNEQIRKITKELYKGEG*
Ga0098058_113256223300006750MarineMKHLILKVLDRYKDRQINLASETAREQIASEIEAVLIQNEQVRQIQRELYKGEG*
Ga0098040_103563523300006751MarineMKYLIKKVLDKYKDKQLDLSSDDIREQIASEIEAKLIQNEQIRQIERALYRGEG*
Ga0098040_115375523300006751MarineMKHLIKEVLDKYKNKQINLGSETAREHLATEIEAKLIQNEQIIQIERELYRGEG*
Ga0098048_103138963300006752MarineMKHLIEKVLNRHRNGQFNMGSESARKMLAAEIEAVLQQNKQILEIERELYRGEG*
Ga0098048_113434413300006752MarineKVLDRHKSGQFNMGSDSAREMLAVEIEAVLIQDEQIKQITKELYKGEG*
Ga0098055_123796313300006793MarineMRHLILKVLNRYKNRQINLGSDSARENLASEIEAVLIQNEQVRKLQRELYKGEG*
Ga0098060_104131923300006921MarineMKHIILKVLDRHKNGQFNMDSDSAREMLATEIEAVLIQDEQIRMITKELYKGEG*
Ga0098060_104204813300006921MarineDRHKSGQFNMGSDSAREMLAAEIEAVLIQDEQVRLITKELYKGEG*
Ga0098045_102676643300006922MarineMKHLIEEVLNRHRNGQFNMGSESARKMLAAEIEAVLQQNKQILEIERELYRGEG*
Ga0098041_112336633300006928MarineMKHLIKKVLDRHKSGQFNMESDAAREMLASEIEAVLIQDKQVRKLQQELYKGEG*
Ga0098046_101033433300006990MarineMKHLIEKVLNRHRNGQFNMSSESARKMLAAEIEAVLQQNKQILEIERELYRGEG*
Ga0105748_1047288423300007992Estuary WaterMKHLIEKVLNRYRNGQFNMGSESARKMLAAEIEAVLQQNEQITSIERELYRGEG*
Ga0098052_116749123300008050MarineMKHLILKVLDRYKDRQINLASETAREQIASEIEAVLIQNEQVRKLQRELYKGEG*
Ga0115566_1036181223300009071Pelagic MarineMRHLILKVLDRYKNGQTNLGSESAREMIAAEIEAVLISNEQIKQITRDLYKGEG*
Ga0115011_1184883613300009593MarineKVLDRHKNGQFNMGSNSAREMLAAEIEAVLKQNEQIIEIERELYRGEG*
Ga0115011_1206658323300009593MarineMIKDLILKVLDRHKNGQLNLESSATRKLIAEEIEAVLKQNEQIIAIERELYRGEG*
Ga0115012_1198085713300009790MarineMKHIILKVLDRHKSGQFNMESDAAREMLASEIEAVLIQDKQLQLITKELYKGEG*
Ga0098049_116594513300010149MarineMKRLIEKVLNRHRNGQFNMGSKSARKMLAAEIEAVLQQNKQIIEIERELYRGEG*
Ga0098061_101608243300010151MarineMIKDLILKVLDRHKNGQFNMGSDSAREMLATEIEAVLKQNEQIIEIERELYRGEG*
Ga0098061_119426423300010151MarineMKHLILKVLDRYKDRQINLGSETAREQIASEIEAVLIQNEQVRKIQQELYKGEG*
Ga0098047_1007173113300010155MarineRIMKYLIKKVLDKYKDKQLDLSSDDIREQIASEIEAKLIQNEQIRQIERALYRGEG*
Ga0160423_1044751313300012920Surface SeawaterHKSGQFNMESDAAREMLATEIEAVLIQDKQIGLLTKELYKGEG*
Ga0163109_1061980613300012936Surface SeawaterMKYIILKVLDRHKSGQFNMESDAAREMLASEIEAVLIQDKQVRKLQRELYKGEG*
Ga0163180_1089383513300012952SeawaterVLDRHKSGQFNMGSDSAREMLAVEIEAVLIQDEQVRLITKELYKGEG*
Ga0181367_103892023300017703MarineMKHLILKVLDRYKDRQINLASETAREQIASEIEAVLIQNEQVRQIRRELYKGEG
Ga0181371_103458123300017704MarineMKHLILKVLDRYKDRQINLGSETAREQIASEIEAVLIQNEQVRKIQQEL
Ga0181390_116640033300017719SeawaterMKHLIEKVLNRHRNGQFNMGSESARKMLAAEIEAVLQQNKQIIEIER
Ga0181396_101646633300017729SeawaterMKHLIEKVLNRHRNGQFNMGSESARKMLAAEIEAVLQQHEQIISIERELYRGEG
Ga0181417_114019813300017730SeawaterYKNGQTNLGSKAAREMIAAEIEAVLIQDEQIKIITKELYKGEG
Ga0181402_101481013300017743SeawaterRHKSGQFNMGSDSAREMLATEIEAVLLQNEQIKLITKELYKGEG
Ga0181427_108747343300017745SeawaterMKHLIEEVLNRHRNGQFNMGSESARKMLAAEIEAVLQQHEQIIEIERELYRGEG
Ga0181427_113883233300017745SeawaterMNTIEIIEKVLKRYKNMQLNLSSESARKMLAAEIEAVLQQNKQIIEIERELYRGEG
Ga0187219_115030213300017751SeawaterMKHLIEEVLNRHRNGQFNMGSESARKMLAAEIEAVLQQNKQIIEIERE
Ga0181409_124013813300017758SeawaterTGXGDIRNMKHLIEKVLNRHRNGQFNMGSESARKMLAAEIEAVLQQNEQIIEIERELYRGEG
Ga0181432_102968363300017775SeawaterMKHLILKVLDKYKDKQLNLGSKSARENLASEIEAKLIQNKQIRQIERALYRGEG
Ga0181423_108120713300017781SeawaterKQXRTGXGDIRNMKHLIEKVLNRHRNGQFNMGSESARKMLAAEIEAVLQQNKQIIEIERELYRGEG
Ga0181552_1055874613300017824Salt MarshNMGSKSAREMLATEIEAVLIQDEQLRIITKELYKGEG
Ga0181580_1036574633300017956Salt MarshHKNSQFNMASKSAREMLATEIEAVLIQDEQLRIITKELYKGEG
Ga0181580_1103153413300017956Salt MarshKHIILKVLNRHKDSQFNMGSKSAREMLATEIEAVLIQDEQLQIITKELYKGEG
Ga0181580_1103849223300017956Salt MarshMKHIILKVLDRHKNSQFNMASKSAREMLATEIEAVLIQDEQVRQITRELYKGEG
Ga0181590_1109067213300017967Salt MarshVLNRHKDSQFNMGSKSAREMLATEIEAVLIQDEQVKQIARELYKGEG
Ga0181569_1018689213300017986Salt MarshRHKDSQFNMGSKSAREMLATEIEAVLIQDEQLRIITKELYKGEG
Ga0181591_1057400333300018424Salt MarshMKHIILKVLNRHKDSQFNMASKSAREMLATEIEAVLIQDKQVRQITRELYKGEG
Ga0206125_1006110853300020165SeawaterMKHLIEKVLNRHRNGQFNMGSESARKMLAAEIEAVLQQNKQIIEIERELYRGEG
Ga0206124_1011719923300020175SeawaterMKHLIKKVLDRHKSGQFNKKSDSAREMLATEIEAVLLQNEQIKLITKELYKGEG
Ga0211652_1010404033300020379MarineMIKDLILKVLDRHKNGQLNLESSATRKLIAEEIEAVLKQNEQIIAIERELYRGEG
Ga0211678_1031722133300020388MarineMRHLILKVLDRYKNGQTNLGSKAAREMIAAEIEAVLISNEQVKQITRDLYKGEG
Ga0211497_1019681323300020394MarineMKHIILKVLNRHKDSQFNMASKSAREMLATEIEAVLIQDEQVKQIARELYKGEG
Ga0211651_1010124123300020408MarineMKHIILKVLNRHKDSQFNMSSKSAREMLATEIEAVLIQDEQLRIITKELYKGEG
Ga0211587_1038272423300020411MarineMKHIILKVLDRHKNGQFNMGSKSAREMLATEIEAVLIQDEQLRIITKELYKGEG
Ga0211523_1033519123300020414MarineMKHIILKVLDRHKSGQFNMESDTAREMLATEIEAVLIQDEQIRLLTKELYKGEG
Ga0211708_1048712523300020436MarineMKIRKDLILNVLDKHKDEQLNLASASARELLATEIEAKLIQNEQIIEIEQELYRGEG
Ga0211558_1036388213300020439MarineIILKVLNRHKDSQFNMASKSAREMLATEIEAVLIQDEQVRQITRELYKGEG
Ga0211559_1033366733300020442MarineSQFNMGSKSAREMLATEIEAVLIQDEQLRIITKELYKGEG
Ga0211559_1045692913300020442MarineHKDSQFNMSSKSAREMLATEIEAVLIQDEQVKQIARELYKGEG
Ga0211642_1018747123300020449MarineMKHIILKVLDRHKNGQFNMDSDSAREMLATEIEAVLIQDEQVRLITKELYKGEG
Ga0211641_1013001323300020450MarineMKHIILKVLDRHKNGQFNMDSDSAREMLATEIEAVLIQDEQLRIITKELYKGEG
Ga0211543_1007248753300020470MarineMKYLIKKVLDKYKDKQLDLSSDDIREQIASEIEAKLIQNEHIRQIERALYRGEG
Ga0211543_1030391023300020470MarineMKHLIKKVLDRYKNRQINLGSESARENLASEIEAVLIQDKQVRKLQRELYKGEG
Ga0211543_1038144813300020470MarineVKEIIKSVLDRYKDRQINLGSETAREQLAIEIEAVLIQNEQVQKIIKELYKGEG
Ga0206682_1014301223300021185SeawaterMKHLIKKVLDRHKNGQLNMSSESAREMLATEIEAVLIQNEQVRKLQRELYEGEG
Ga0213860_1037510423300021368SeawaterMKHIILKVLDRHKNSQFNMASKSAREMLATEIEAVLIQDKQVRQITRELYKGEG
Ga0224906_107451333300022074SeawaterMKHLIEEVLNRHRNGQFNMGSESARKMLAAEIEAVLQQHEQIISIERELYRGEG
(restricted) Ga0233432_1022816923300023109SeawaterMKHLIEKVLNRHRNGQFNMGSESARKMLAAEIEAVLQQNEQIIEIERELYRGEG
Ga0209992_1027397433300024344Deep SubsurfaceQFNMGSDSAREMLATEIEAVLIQDEQIRLLTKELYKGEG
Ga0244775_1024451743300024346EstuarineMKHLIEKVLNRHRNGQFNMGSESARKMLAAEIEAVLQQNEQITSIERELYRGEG
Ga0208667_104082433300025070MarineMKHLIEKVLNRHRNGQFNMSSESARKMLAAEIEAVLQQNKQILEIERELYRGEG
Ga0208920_103100333300025072MarineMKHLILKVLDRYKDRQINLASETAREQIASEIEAVLIQNEQVRQIQRELYKGEG
Ga0208011_101783133300025096MarineMKYLIKKVLDKYKDKQLDFSSDDIREQIASEIEAKLIQNEQIIKIERELYRGEG
Ga0208011_102514523300025096MarineMKHLILKVLDRYKDRQINLGSETAREQIASEIEAVLIQNEQVRQIRRELYKGEG
Ga0208011_103416943300025096MarineMKYLIKKVLDKYKDKQLNLGSESARENLAAEIEARLIQSEHIRQIERALYRGEG
Ga0208669_106408033300025099MarineMKHLIEEVLNRHRNGQFNMSSESARKMLAAEIEAVLQQNKQILEIERELYRGEG
Ga0208666_102182663300025102MarineMKHLIEEVLNRHRNGQFNMASESARKMLAAEIEAVLQQNKQILEIERELYRGEG
Ga0208793_113423813300025108MarineMRHLILKVLNRYKNRQINLGSDSARENLASEIEAVLLQNEQVRKLQREL
Ga0208553_114403713300025109MarineMKHLILKVLDRYKDRQINLASETAREQIASEIEAVLIQNEQVRQIQRELYKGE
Ga0209349_110002513300025112MarineLDKYKDKQLDFSSDDIREQIASEIEAKLIQNEQIIKIERELYRGEG
Ga0209349_110018553300025112MarineMKYLIKKVLDKYKDKQLDLSSDDIREQIASEIEAKLIQNEQIRQIERALYRGEG
Ga0208433_113338113300025114MarineNGVKMKHLILKVLDRYKDRQINLGSETAREQIASEIEAVLIQNEQVRQIRRELYKGEG
Ga0209535_112720833300025120MarineMRHLILKVLDRYKNGQTNLGSKAAREMIAAEIEAVLIQDEQMKLITKELYKGEG
Ga0209535_114904233300025120MarineMRHLILKVLDRYKNGQTNLGSKSAREMIAAEIEAVLISDEQVKQITRDLYKGEG
Ga0209232_104159123300025132MarineMIKDLILKVLDRHKNGQFNMGSDSAREMLAIEIEAVLKQNEQIIEIERELYRGEG
Ga0209645_121938823300025151MarineMKHVILKVLDRHKDGQLNMASKSAREMLAAEIEAVLIQDEQIKSLTRELYRGEG
Ga0209645_124505023300025151MarineMKYIILKVLDRHKSGQFNMESDAAREMLASEIEAVLIQDKQVRKLQRELYKGEG
Ga0209666_109312953300025870MarineGNMKHLIEKVLNRYRNGQFNMGSESARKMLAAEIEAVLQQNEQITSIERELYRGEG
Ga0209757_1010968133300025873MarineDRYKDRRWQDQINLGSEVDREKLATEIEATLIQNEQIRQIERALYRGEG
Ga0209757_1022677733300025873MarineMKHLILKVLDRYKDRRWQDQINLGSEVDREKLASEIEATLIQNEQIRQIERALYRGEG
Ga0209815_101864033300027714MarineMKHLIKKVLDRYKNGQTNLASESAREILAAEIEAVLINDEQVRQVTKEPYKGEG
Ga0209404_1055445413300027906MarineMRQLILKVLNRYKNRQINLGSESARDNLASEIEAVLIQNEQESKIEGEG
Ga0257107_121625023300028192MarineMKHLILKVLDRYKDRRWQDQINLGSEVDREKLASEIEAVLIQNEQVRQITRALYRGEG
Ga0257114_109639823300028196MarineMRHLILKVLDRYKNGQTNLDSKAAREMIAAEIEAVLISNEQVKQITRDLYKGEG


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