NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F089488

Metagenome Family F089488

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F089488
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 39 residues
Representative Sequence ILSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Number of Associated Samples 20
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 11
AlphaFold2 3D model prediction Yes
3D model pTM-score0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms Symbiont
(61.468 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 27.27%    β-sheet: 0.00%    Coil/Unstructured: 72.73%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Marine Gutless Worms SymbiontHost-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms Symbiont61.47%
Marine Gutless Worms SymbiontHost-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont38.53%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001734Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type A ELBA extract 1Host-AssociatedOpen in IMG/M
3300001741Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type G ELBA extract 1Host-AssociatedOpen in IMG/M
3300001742Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type G ELBA extract 3Host-AssociatedOpen in IMG/M
3300001744Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type A ELBA extract 2Host-AssociatedOpen in IMG/M
3300001746Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type G ELBA extract 2Host-AssociatedOpen in IMG/M
3300002181Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type A ELBA extract 3Host-AssociatedOpen in IMG/M
3300003801Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius algarvensis Type A CAVOLI.1Host-AssociatedOpen in IMG/M
3300004098Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius algarvensis Type A CAVOLI.2 (version 2)Host-AssociatedOpen in IMG/M
3300004122Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius algarvensis Type A CAVOLI.3 (version 2)Host-AssociatedOpen in IMG/M
3300027540Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius algarvensis Type A CAVOLI.1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027551Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type A ELBA extract 1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027556Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type G ELBA extract 2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027557Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius sp. 2 HERON ISLAND (SPAdes)Host-AssociatedOpen in IMG/M
3300027564Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type G ELBA extract 1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027584Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type G ELBA extract 3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027585Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius algarvensis Type A CAVOLI.3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027613Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type A ELBA extract 2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027620Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius algarvensis Type G CAVOLI (SPAdes)Host-AssociatedOpen in IMG/M
3300027626Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius algarvensis Type A CAVOLI.2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027632Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type A ELBA extract 3 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24668J20090_1012060013300001734Marine Gutless Worms SymbiontRLILSVSEPSISQRSQIKEDTVEPSVPAREFNFKPYAAIT*
JGI24668J20090_1018109423300001734Marine Gutless Worms SymbiontMSVSKPSISQRSQIKEDTVEPSVPAQEFNLKAYAAI
JGI24671J20093_1019756913300001741Marine Gutless Worms SymbiontRLILSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYAAII*
JGI24673J20094_1003799733300001742Marine Gutless Worms SymbiontSKPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT*
JGI24673J20094_1019369213300001742Marine Gutless Worms SymbiontLSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYATIT*
JGI24669J20092_1002161613300001744Marine Gutless Worms SymbiontFKQRLILSVSEPSISQRSQIKEDSVERSVPAGEFNLKAYAAII*
JGI24672J20091_1001802813300001746Marine Gutless Worms SymbiontLILSVSEPSISQRSQIKEDTVEPSVPAREFNLKA*
JGI24672J20091_1003724613300001746Marine Gutless Worms SymbiontSKPSISQRSQIKEDTVEPSVPAREFNLKSYAAIT*
JGI24672J20091_1012016923300001746Marine Gutless Worms SymbiontYQWFKQRLILSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT*
JGI24670J26820_1117408213300002181Marine Gutless Worms SymbiontSKPSISQRSQIKEDTIEPSVPAREFNLKAQAAIT*
JGI24670J26820_1127061913300002181Marine Gutless Worms SymbiontLSVSKPSISQRSQIKEDTIEPSVPAREFNFKAYAAILPLN*
JGI24670J26820_1143526113300002181Marine Gutless Worms SymbiontQRLILSVSKPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT*
JGI24670J26820_1144769313300002181Marine Gutless Worms SymbiontKQRLILSVSKPSISQRSQIKEDTVEPSVPTRDFNIKAYAAIT*
JGI24670J26820_1153947613300002181Marine Gutless Worms SymbiontIPIVSKPSISQRSQIKEDTVEPSVPAQECNFKAYATIT*
JGI24670J26820_1163520763300002181Marine Gutless Worms SymbiontRLILSESKPGISQRSQIKEDTVEPSVPAQKFNLKAYAAIA*
Ga0056138_105514113300003801Marine Gutless Worms SymbiontLILSVSEPSISQRSQIKEDTVEPSVPAREFNFKPYAAIT*
Ga0065184_1006248323300004098Marine Gutless Worms SymbiontSVSKPSISQRSEIKEDTVEPSMPAREFNLKAYTKHNLTQ*
Ga0065184_1007329613300004098Marine Gutless Worms SymbiontRLILSVSEPSISQRSQIKEETVELSVPAREFNLKAYLAIT*
Ga0065184_1011499123300004098Marine Gutless Worms SymbiontLILSVSKPSISQRSQIKEDTVEPSVPAREFNLKANATIA*
Ga0065184_1013218713300004098Marine Gutless Worms SymbiontQRLILSVSKPSISQQSQIKDDIVEPSVPAQEFNLKANAAIIRQ*
Ga0065184_1019877313300004098Marine Gutless Worms SymbiontLILSVSKPSISQRSQIKEDTFEPSVHAREFLSQSMYAVIT*
Ga0065184_1023551423300004098Marine Gutless Worms SymbiontRLILSVSKPSISQRSQIKEETVEPSVPAREFNVKAYTTMT*
Ga0065184_1028984423300004098Marine Gutless Worms SymbiontLILSVSEPSISQRSQIKEDNVEPSVSAREFNLKVYAAIT*
Ga0065184_1035383213300004098Marine Gutless Worms SymbiontRHTAGGHLFKQRLILSVSKPVISQRSQIKEDTVEPSVPAREFNFKAYAAIT*
Ga0065185_1017863113300004122Marine Gutless Worms SymbiontLILSVSKPSISQRSQIKEDTFEPSVPAREFKLKAYAAII*
Ga0065185_1019145933300004122Marine Gutless Worms SymbiontLILSVSKPSISQRSQIKEDTIEPSVPVQEFNLKAYAAIT*
Ga0065185_1032395913300004122Marine Gutless Worms SymbiontRLILSVSKPSISQRSQIKEDKVEPSVPARELYLKAYAAIT*
Ga0209791_101292413300027540Marine Gutless Worms SymbiontILSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYTAIT
Ga0209791_101972723300027540Marine Gutless Worms SymbiontLSISEPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209791_105499513300027540Marine Gutless Worms SymbiontVSKPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209791_105642313300027540Marine Gutless Worms SymbiontYQWFKQRLILSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYTAIN
Ga0209791_108287113300027540Marine Gutless Worms SymbiontQWFKQRLILSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209791_108972113300027540Marine Gutless Worms SymbiontLSVSEPSISQRSQIKEDTVEPSVPAQEFNLKANAAIT
Ga0209791_109385223300027540Marine Gutless Worms SymbiontVSEPSVSQRSQIKEDTVEPSVPAREFNLKAYATIT
Ga0209791_111448113300027540Marine Gutless Worms SymbiontRLILSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209791_114507513300027540Marine Gutless Worms SymbiontILSVSKPSISQRSQIKEDTVEPSVPAQEFNLKAYAAIT
Ga0209791_114931413300027540Marine Gutless Worms SymbiontLSISEPSISQRSQIKEDTVEPSVPAREFNLKAYATTT
Ga0209791_115174313300027540Marine Gutless Worms SymbiontLVLSVSEPSISQRSQIKEDTVEPSVPAREFNLKVYAAVT
Ga0209791_123613113300027540Marine Gutless Worms SymbiontVSKPSISQRSQIKEDTVEPSVPAREFNLKAYATIT
Ga0209791_130776813300027540Marine Gutless Worms SymbiontVSEPSISQRSQIKEDTVEPSVPAREFNLKAYTSIT
Ga0209791_131091513300027540Marine Gutless Worms SymbiontILSVSEPSISQRSQIKEDTVEPSVPAQEFNLKAYATIT
Ga0209791_132669213300027540Marine Gutless Worms SymbiontWFKQRLILSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209791_133147713300027540Marine Gutless Worms SymbiontILRVSKPSISQRSQIKEDTVEPSVPAREFNLKAYAAIN
Ga0209791_135517413300027540Marine Gutless Worms SymbiontLSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209338_102347913300027551Marine Gutless Worms SymbiontSVSKPSISQRSQIKEDTVEPSVPAREFNLKAYAAIS
Ga0209338_103014633300027551Marine Gutless Worms SymbiontQWFKQQLTLSLSKPSIRQRPQIKEDTVEPSVPAREFNFKAYATIT
Ga0209338_112573613300027551Marine Gutless Worms SymbiontVSKPNISQRPQIKEDTVEPSVPAQEFNLKAYAAIT
Ga0209338_113500413300027551Marine Gutless Worms SymbiontSVSEPSISQRSQIKEDTVEPSVPGREFNLKAYTAIT
Ga0209338_124822913300027551Marine Gutless Worms SymbiontSVSKPSISQRSQIKEDTVEPSVPAREFNLKAYTAIT
Ga0209338_128013823300027551Marine Gutless Worms SymbiontQWFKQRLILSVSKPSISQRSQIKEDTVEPSVPAREFNLKEYAAIT
Ga0209338_129854313300027551Marine Gutless Worms SymbiontLSVSKPSISQRSQIKEDTIEPSVPAREFNLKTYAAIT
Ga0209743_107152113300027556Marine Gutless Worms SymbiontKQRLILSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYTAIN
Ga0209743_117027023300027556Marine Gutless Worms SymbiontWFKQRLTLSVSKPSISQWSQIKEDTVEPSVPAQEFNLKAYATIT
Ga0209743_117426513300027556Marine Gutless Worms SymbiontSVSKPSISQRSQIKEDTVEPSVPAQEFNLKAYAAIT
Ga0209743_118396013300027556Marine Gutless Worms SymbiontRLILSVSKPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209743_121302713300027556Marine Gutless Worms SymbiontLSASKPSISQRSQIKEDTVKASVPAREFNFKAYAAIT
Ga0209743_123964913300027556Marine Gutless Worms SymbiontVSKPSISQRSQIKEDTIEPSVPAREFNLKAYAAIT
Ga0209743_125456013300027556Marine Gutless Worms SymbiontRFRQQLILSVSKPSISQRSQIKEDTVEPSVPAREFNLKA
Ga0209679_119082213300027557Marine Gutless Worms SymbiontILSVSEPSISQRSQIKEDTVEPSVPAQEFNLKAYAAIT
Ga0209428_106520813300027564Marine Gutless Worms SymbiontRLIPSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYAFVT
Ga0209428_111086113300027564Marine Gutless Worms SymbiontCYQWFKQRLILSVSKPSISQRSQIKEDTVEPSVPAHEFNLKAYAAIT
Ga0209428_114300713300027564Marine Gutless Worms SymbiontLILSVSEPSISQRSQIKEDTVEPSVAAREFNLKAYAAIT
Ga0209428_118421413300027564Marine Gutless Worms SymbiontKQRLILSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYATIT
Ga0209428_119742813300027564Marine Gutless Worms SymbiontQRLILSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYAVIT
Ga0209428_121297513300027564Marine Gutless Worms SymbiontVSEPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209428_122235733300027564Marine Gutless Worms SymbiontQWSKQRLIVSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209428_123064313300027564Marine Gutless Worms SymbiontLILSVSEPSISQWSQIKEDTIEPSVPAREFNLKAYAAIT
Ga0209428_123175413300027564Marine Gutless Worms SymbiontVSEPSISQRSQIKEDTVEPSVPAREFNLKAYAVII
Ga0209428_123529713300027564Marine Gutless Worms SymbiontLSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYTAIT
Ga0209428_124100113300027564Marine Gutless Worms SymbiontIVSKPSISQWSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209428_125040613300027564Marine Gutless Worms SymbiontILSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209428_130081613300027564Marine Gutless Worms SymbiontNSDILSVSKPSISQRSQIKEDTVEPSVPARVFNLKAYAAIT
Ga0209428_130772913300027564Marine Gutless Worms SymbiontSVSEPSISQWSQIKEDTVEPSVPAQEFNLKAYAAIT
Ga0209637_100645713300027584Marine Gutless Worms SymbiontWFKQRLILSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYAAII
Ga0209637_104510533300027584Marine Gutless Worms SymbiontSVSKPNISQRSQIKEDTVEPSVPAREFNFKAYAAIT
Ga0209637_111610413300027584Marine Gutless Worms SymbiontWFKQRLILSVSKPSISQRSQIKEDTVEPSVPAHEFNLKAYAAIT
Ga0209637_114148413300027584Marine Gutless Worms SymbiontFSKPSVSQWSQIKEDTVELSVPAREFNLKAYAAII
Ga0209637_115217423300027584Marine Gutless Worms SymbiontILSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYTAIN
Ga0209637_119645813300027584Marine Gutless Worms SymbiontILSVSEPSISQRAQIKEDTIEPSVPAQEFNLKAYAAIA
Ga0209637_121552313300027584Marine Gutless Worms SymbiontILSVSKPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209637_123287913300027584Marine Gutless Worms SymbiontFTQRLILSVSEPCSISQRSQIKEDTVEPSVPAREFNLKAYTAIT
Ga0209637_125201813300027584Marine Gutless Worms SymbiontQWFKQRLILSVSKASISQRSQIKEDTVEPSVPAREFNLKAYAAII
Ga0209637_127115813300027584Marine Gutless Worms SymbiontLSVSEPSISQRSQIKEDTVEPSVPAREFNLKACTAIT
Ga0209637_128582813300027584Marine Gutless Worms SymbiontSVSEPSISQRSQIKEETVKPIVPAREFNLKVYAAIT
Ga0209637_138941213300027584Marine Gutless Worms SymbiontVVLAATILSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYAA
Ga0209150_108533413300027585Marine Gutless Worms SymbiontHWFKQRQILSVPKPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209150_115562713300027585Marine Gutless Worms SymbiontKQRLILSVSERSISQRSQIKEDTVEPSVPAREFNLKVYAAIT
Ga0209150_118809913300027585Marine Gutless Worms SymbiontSVSKPSISQRSQIKEDTVEPSVPAREFNLKAYATICICVT
Ga0209150_124291713300027585Marine Gutless Worms SymbiontQWFNQRLILSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209150_135057113300027585Marine Gutless Worms SymbiontSVSEPSISHRSQIKEDTVEPSVPAQEFNLKAYAAIT
Ga0209122_105713513300027613Marine Gutless Worms SymbiontVSEPSIYQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209122_110490333300027613Marine Gutless Worms SymbiontSVSKPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209122_113908413300027613Marine Gutless Worms SymbiontEEEEPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209122_114022813300027613Marine Gutless Worms SymbiontWFKQRLILSVSKPSISQRSQIKEDTVEPSVPAREFNLNAYAAIT
Ga0209122_122431413300027613Marine Gutless Worms SymbiontLILSVSKPSISQRSQIKEDTVEPSVPAREFNLKSYAAIT
Ga0209122_125849913300027613Marine Gutless Worms SymbiontLILNVSEPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209122_131344523300027613Marine Gutless Worms SymbiontKQRLILSVSEPSISQRSQIKEDIIEPSVPAQEFNLKAFFCIT
Ga0209260_1008182513300027620Marine Gutless Worms SymbiontILSVSKPSISQRSQIKEDTVEPSVPAREFNLKAYTAIT
Ga0209149_100457553300027626Marine Gutless Worms SymbiontLILSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYAAII
Ga0209149_111488033300027626Marine Gutless Worms SymbiontYQWFKQRLILSVSKPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209149_112496023300027626Marine Gutless Worms SymbiontCYQWFKQRLILSVSKPSISQRSQIKEDTVEPSVPAQEFNLKVYVTIT
Ga0209149_114741923300027626Marine Gutless Worms SymbiontSVSEPSISQRSQIKEDTVEPSVPAQEFNLKAYATIT
Ga0209149_123771413300027626Marine Gutless Worms SymbiontWFKQQLILSVAEPNISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209149_125742713300027626Marine Gutless Worms SymbiontCYQWFKLRLILSVSKPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209339_102004913300027632Marine Gutless Worms SymbiontYQWFKQRLILSVSEPSISQRSQIKEDTVEPSVPAQEFNLKAYAAIT
Ga0209339_105599513300027632Marine Gutless Worms SymbiontVSEPSISQRSQIKEDTVEPSVPAREFNLKAYTAIT
Ga0209339_116759833300027632Marine Gutless Worms SymbiontLSVSKPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209339_121232813300027632Marine Gutless Worms SymbiontYQWFKQRLILSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYAAIT
Ga0209339_123712613300027632Marine Gutless Worms SymbiontWFKQRLILSVSEPSISQRSQIKEDTVEPSVPAREFNLKAYTVIT

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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