NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F089545

Metagenome Family F089545

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F089545
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 98 residues
Representative Sequence MVRARLIYLYRKLTFSSSLVILLLELLPGCSTQPQSHPLDTRPIPRDAQFLEECSIKGVMACRVMSALSGDYGAERRSDCIAYRDSNFKLVEQCGSLPATQP
Number of Associated Samples 82
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 63.89 %
% of genes near scaffold ends (potentially truncated) 32.11 %
% of genes from short scaffolds (< 2000 bps) 77.98 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (67.890 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(21.101 % of family members)
Environment Ontology (ENVO) Unclassified
(32.110 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(41.284 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 30.77%    β-sheet: 11.54%    Coil/Unstructured: 57.69%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF09084NMT1 31.19
PF13379NMT1_2 3.67
PF01717Meth_synt_2 2.75
PF01471PG_binding_1 2.75
PF00248Aldo_ket_red 0.92
PF08241Methyltransf_11 0.92
PF01979Amidohydro_1 0.92
PF13343SBP_bac_6 0.92
PF13365Trypsin_2 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 31.19
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 31.19
COG0620Methionine synthase II (cobalamin-independent)Amino acid transport and metabolism [E] 2.75


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms67.89 %
UnclassifiedrootN/A32.11 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886007|SwRhRL2b_contig_1368431All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1081Open in IMG/M
3300000443|F12B_12281490Not Available587Open in IMG/M
3300000559|F14TC_100653409All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium684Open in IMG/M
3300000580|AF_2010_repII_A01DRAFT_1017707All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1139Open in IMG/M
3300000837|AP72_2010_repI_A100DRAFT_1065666All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium515Open in IMG/M
3300001431|F14TB_100638918All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1040Open in IMG/M
3300001431|F14TB_101428798Not Available639Open in IMG/M
3300002899|JGIcombinedJ43975_10089742Not Available554Open in IMG/M
3300003911|JGI25405J52794_10000289All Organisms → cellular organisms → Bacteria → Proteobacteria6878Open in IMG/M
3300003999|Ga0055469_10213294Not Available606Open in IMG/M
3300004019|Ga0055439_10259575All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium568Open in IMG/M
3300005180|Ga0066685_11063242All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium531Open in IMG/M
3300005183|Ga0068993_10342550All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium546Open in IMG/M
3300005289|Ga0065704_10010782All Organisms → cellular organisms → Bacteria2121Open in IMG/M
3300005289|Ga0065704_10538459Not Available585Open in IMG/M
3300005295|Ga0065707_10311924Not Available983Open in IMG/M
3300005445|Ga0070708_101035482Not Available769Open in IMG/M
3300005447|Ga0066689_10609257Not Available688Open in IMG/M
3300005467|Ga0070706_100249817All Organisms → cellular organisms → Bacteria1656Open in IMG/M
3300005468|Ga0070707_100321288All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1504Open in IMG/M
3300005713|Ga0066905_100581115All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium945Open in IMG/M
3300005713|Ga0066905_101020022Not Available731Open in IMG/M
3300005713|Ga0066905_101754755Not Available571Open in IMG/M
3300005713|Ga0066905_102235717Not Available510Open in IMG/M
3300005937|Ga0081455_10717365All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium635Open in IMG/M
3300006049|Ga0075417_10050617All Organisms → cellular organisms → Bacteria1792Open in IMG/M
3300006049|Ga0075417_10443672Not Available646Open in IMG/M
3300006797|Ga0066659_10515621All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium961Open in IMG/M
3300006846|Ga0075430_100285407All Organisms → cellular organisms → Bacteria1366Open in IMG/M
3300006847|Ga0075431_100463015All Organisms → cellular organisms → Bacteria1262Open in IMG/M
3300006847|Ga0075431_100558723All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1131Open in IMG/M
3300006847|Ga0075431_100741042All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium958Open in IMG/M
3300006852|Ga0075433_10552285All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1012Open in IMG/M
3300006852|Ga0075433_11541986All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium574Open in IMG/M
3300006871|Ga0075434_100155496All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2306Open in IMG/M
3300007076|Ga0075435_100148694All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1968Open in IMG/M
3300009012|Ga0066710_100488891All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1853Open in IMG/M
3300009081|Ga0105098_10008624All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3728Open in IMG/M
3300009100|Ga0075418_10299932All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1713Open in IMG/M
3300009100|Ga0075418_12091990Not Available617Open in IMG/M
3300009147|Ga0114129_12276219Not Available651Open in IMG/M
3300009157|Ga0105092_10004753All Organisms → cellular organisms → Bacteria7215Open in IMG/M
3300009157|Ga0105092_10035441All Organisms → cellular organisms → Bacteria2655Open in IMG/M
3300009157|Ga0105092_10086999All Organisms → cellular organisms → Bacteria → Proteobacteria1705Open in IMG/M
3300009157|Ga0105092_10498209Not Available698Open in IMG/M
3300009157|Ga0105092_10509359All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium690Open in IMG/M
3300009168|Ga0105104_10264365Not Available941Open in IMG/M
3300009168|Ga0105104_10408191All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300009792|Ga0126374_10156847All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1387Open in IMG/M
3300009792|Ga0126374_10456518Not Available909Open in IMG/M
3300010043|Ga0126380_10686902Not Available821Open in IMG/M
3300010043|Ga0126380_11831507Not Available550Open in IMG/M
3300010047|Ga0126382_10571841All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium924Open in IMG/M
3300010047|Ga0126382_11323610All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium653Open in IMG/M
3300010047|Ga0126382_11651620All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium596Open in IMG/M
3300010358|Ga0126370_10206736All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1488Open in IMG/M
3300010360|Ga0126372_10034703All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3222Open in IMG/M
3300010361|Ga0126378_10649265All Organisms → cellular organisms → Bacteria1168Open in IMG/M
3300010362|Ga0126377_10889734All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium953Open in IMG/M
3300010362|Ga0126377_11028735All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium891Open in IMG/M
3300010362|Ga0126377_12702150Not Available571Open in IMG/M
3300010366|Ga0126379_10421705All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1388Open in IMG/M
3300010376|Ga0126381_100923136All Organisms → cellular organisms → Bacteria1257Open in IMG/M
3300010398|Ga0126383_10486082All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1291Open in IMG/M
3300010398|Ga0126383_10878470All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium982Open in IMG/M
3300012160|Ga0137349_1004356All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1892Open in IMG/M
3300012204|Ga0137374_10412806All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1070Open in IMG/M
3300012207|Ga0137381_11229065Not Available642Open in IMG/M
3300012208|Ga0137376_10112719All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2315Open in IMG/M
3300012353|Ga0137367_10141624All Organisms → cellular organisms → Bacteria1758Open in IMG/M
3300012358|Ga0137368_10735249Not Available617Open in IMG/M
3300012359|Ga0137385_10444181All Organisms → cellular organisms → Bacteria1102Open in IMG/M
3300012582|Ga0137358_10256852All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1188Open in IMG/M
3300012922|Ga0137394_10094205All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2516Open in IMG/M
3300012944|Ga0137410_11945547Not Available522Open in IMG/M
3300012948|Ga0126375_10567900Not Available860Open in IMG/M
3300012948|Ga0126375_11237691Not Available623Open in IMG/M
3300012971|Ga0126369_11421303All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300012971|Ga0126369_12372143Not Available617Open in IMG/M
3300016270|Ga0182036_10732075All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium802Open in IMG/M
3300016387|Ga0182040_10928711All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium723Open in IMG/M
3300018028|Ga0184608_10237518Not Available801Open in IMG/M
3300018052|Ga0184638_1014198All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2744Open in IMG/M
3300018054|Ga0184621_10015321All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2282Open in IMG/M
3300018064|Ga0187773_11027665Not Available542Open in IMG/M
3300018072|Ga0184635_10003868All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium4713Open in IMG/M
3300018072|Ga0184635_10016135All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2683Open in IMG/M
3300018073|Ga0184624_10024524All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2283Open in IMG/M
3300018078|Ga0184612_10021207All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3341Open in IMG/M
3300021081|Ga0210379_10110553All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1149Open in IMG/M
3300021560|Ga0126371_12060998All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium687Open in IMG/M
3300024056|Ga0124853_1403228All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1901Open in IMG/M
3300025939|Ga0207665_10484387Not Available953Open in IMG/M
3300025959|Ga0210116_1066262Not Available698Open in IMG/M
3300027561|Ga0209887_1003051All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium4944Open in IMG/M
3300027646|Ga0209466_1010295All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1978Open in IMG/M
3300027654|Ga0209799_1000135All Organisms → cellular organisms → Bacteria13106Open in IMG/M
3300027722|Ga0209819_10001093All Organisms → cellular organisms → Bacteria8240Open in IMG/M
3300027722|Ga0209819_10015189All Organisms → cellular organisms → Bacteria2519Open in IMG/M
3300027873|Ga0209814_10355791Not Available641Open in IMG/M
3300027874|Ga0209465_10037713All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2292Open in IMG/M
3300027880|Ga0209481_10558195Not Available593Open in IMG/M
3300027952|Ga0209889_1000207All Organisms → cellular organisms → Bacteria14331Open in IMG/M
3300031720|Ga0307469_12341998Not Available521Open in IMG/M
3300031912|Ga0306921_10368032All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1680Open in IMG/M
3300032174|Ga0307470_10616092Not Available814Open in IMG/M
3300032205|Ga0307472_100056773All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2477Open in IMG/M
3300034115|Ga0364945_0010920All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2333Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil21.10%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere13.76%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment9.17%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.26%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment6.42%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil6.42%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands3.67%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.67%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.75%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere2.75%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.83%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.83%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.83%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.92%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.92%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.92%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.92%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.92%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.92%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.92%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886007Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300000443Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemlyEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000580Forest soil microbial communities from Amazon forest - 2010 replicate II A01EnvironmentalOpen in IMG/M
3300000837Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100EnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300002899Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)EnvironmentalOpen in IMG/M
3300003911Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300003999Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2EnvironmentalOpen in IMG/M
3300004019Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005183Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012160Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT630_2EnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024056Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025959Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300027561Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027646Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027654Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027722Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027952Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300034115Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
SwRhRL2b_0241.000060902162886007Switchgrass RhizosphereMVRARPIYVYRKLTFSSSLIILLLVFLPGCSTQPQTHPLDTKAVPRDAEFLAECSIKGVMACKIMSALSGDYGAEKRSACIAYRDSNWRLVEQCGSLPARQP
F12B_1228149013300000443SoilMAWARPIYVYRKLTFSSSLIILLLGFLPGCSTQPQTHPLDTKAVPRDAEFLAECSIKGVMACXXXXXXXXXXXXXKRSACIAYRDSNWRLVEQCGSLPARQP*
F14TC_10065340923300000559SoilMVRARLIYLYRKLTFSSSLVIPLLELLPGCSTQPQTHPLMTRPIPSDAQFLEECSIKGVMACRVMSALSGDYGAERRSECIAYRDSNFKLVEQCGSLPATQP*
AF_2010_repII_A01DRAFT_101770723300000580Forest SoilMFCAHPVYLYRKLTFSSSLAILLLGLLPGCSAQPQTHPLDTKPVPPDAQFLTECSIKGVMACKFMSAISGDYGAEKRSACIAYRDSNGTLVEQCGSVPARQP*
AP72_2010_repI_A100DRAFT_106566623300000837Forest SoilKLTFSSSLAILLLGLLPGCSAQPQTHPLDTKPVPPDAQFLTECSIKGVMACKFMSAISGDYGAEKRSACIAYRDSNGTLVEQCGSVPARQP*
F14TB_10063891813300001431SoilMVRARPIYVYRKLTFSSSLIILLLGFLPGCSTQPQTHPLDTKAVPRDAEFLAECSIKGVMACKIMSALSGDYGAEKRSACIAYRDSNWRLVEQCGSLPARQP*
F14TB_10142879813300001431SoilSKTYKGLMVRARLIYLYRKLTFSSYLVILLLELLPGCSTQPQTHPLMTRPIPSDAQFLEECSIKGVMACRVMSALSGDYGAERRSECIAYRDSNFKLVEQCGSLPATQP*
JGIcombinedJ43975_1008974213300002899SoilMVRARPIYLYRKLTFSSSLVIPLLELLPGCFTQPQTHPLDTKPIPRVDTKPIPRDAQFLEECSIKGVMACRVMSALSGDYGAERRSECIAYRDSNFKLVEQCGSLPATQP*
JGI25405J52794_1000028933300003911Tabebuia Heterophylla RhizosphereLSIIILLLGLFPGCSTQPQTHPLDTKSVPPDAQFLTECSIKGVMACKVMSAMSGDYGAEKRSACIAYRDSNWKLVEQCGSLPARQP*
Ga0055469_1021329413300003999Natural And Restored WetlandsVASLSPSYIYPDLIASSSLIVALLGFLPGCSTQPQTHPLDARSIPRDAQFLKECSTKATLACSLMSALSGDYGAEQRSACIAYRDSSFKLIEQCGSLPAKQP*
Ga0055439_1025957513300004019Natural And Restored WetlandsKAYNCLVVWTSLICIYRKVMMLSLLILMLWLTTGCSTQAQTHPLDTRPIPSDVQFLPECSIRGIVACNLMSTLSGDYGAERRSSCIAYRDSNAKVVEQCGSVPAKQP*
Ga0066685_1106324223300005180SoilILLLELLPGCSTQPQSHPLDTRPIPRDAQFLEECSIKGVMACRVMSALSGDYGAERRSDCIAYRDSNFKLVEQCGSLPATQP*
Ga0068993_1034255023300005183Natural And Restored WetlandsILMLWLTTGCSTQAQTHPLDTRPIPSDVQFLPECSIRGIVACNLMSTLSGDYGAERRSSCIAYRDSNAKVVEQCGSVPAKQP*
Ga0065704_1001078223300005289Switchgrass RhizosphereMVRARPIYVYRKLTFSSSLIILLLVFLPGCSTQPQTHPLDTKAVPRDAEFLAECSIKGVMACKIMSALSGDYGAEKRSACIAYRDSNWRLVEQCGSLPARQP*
Ga0065704_1053845913300005289Switchgrass RhizosphereMVRARPIYLCRKLTFSSSLVILLLGLLSGCSTQPQSHPLDTKPVPRDAEFLAECSIKGVMACKIMSALSGDYGAEKRSACIAYRDSNWRLVEQCGSLPARQP*
Ga0065707_1031192423300005295Switchgrass RhizosphereMAWARRVYVYRKLTFSSSLIILLLVFLPGCSTQPQTHPLDTKAVPRDAEFLAECSIKGVMACKIMSALSGDYGAEKRSACIAYRDSNWRLVEQCGSLPARQP*
Ga0070708_10103548223300005445Corn, Switchgrass And Miscanthus RhizosphereMAGANLIYLYRKLLVSSSLVILLLVLLPGCSTQPQSHPLDTAPIPSDAKFLTECSTKGILACRVMSALSGDYGAERRSACIAYRDSNFKLVEQCGSLPATQP*
Ga0066689_1060925713300005447SoilMAGAYLIYLYRKLLVSCSLVIQLLVLLPGCSTQPQSHPLDTAPIPSDAKFLTECSTKGILACRVMSALSGDYGAERRSACIAYRDSNFKLVEQCGSLPATQP*
Ga0070706_10024981723300005467Corn, Switchgrass And Miscanthus RhizosphereMAGANLIYLYRKLLVSSSLVILLLVLLPGCSTQPQSHPLDTAPIPSDAKFLTECSTKGILACRVMSALSGDYGAERRSACIAYRDSSFKLVEQCGSLPATQP*
Ga0070707_10032128813300005468Corn, Switchgrass And Miscanthus RhizosphereLLVSSSLVILLLVLLPGCSTQPQSHPLDTAPIPSDAKFLTECSTKGILACRVMSALSGDYGAERRSACIAYRDSNFKLVEQCGSLPATQP*
Ga0066905_10058111513300005713Tropical Forest SoilMVWAGPVYLYRKLTFSLSLIMLLLGLLPGCSAQPQTHPLDTKSVPPDAQFLTECSIKGVMACKLMSAMSGDYGAEKRSACIAYRDSNGKLVEQCGSLPARQP*
Ga0066905_10102002213300005713Tropical Forest SoilMVWARPIYVYRKLTFSSSLIILLLGFLPGCSTQPQTHPLDTKAVPRDAEFLAECSIKGVMACKIMSALSGDYGAEKRSACIAYRDSNWRLVEQCGSLPAKQP*
Ga0066905_10175475513300005713Tropical Forest SoilMVWARSIYVYRKLTFSSSLVILLLGLLPGCFTQPQTHPLDTKPVPPDAQFLTECSIKGVMACKFMSAISGDYGAEKRSACIAYRDSNGTLVEQCGSVPAR
Ga0066905_10223571713300005713Tropical Forest SoilMVWARSIYVYRKLTFSSSLVILLLGLLPGCSAQPQSHPLDTKPVPPDAQFLTECSIKGVMACKFMSAISGDYGAEKRSACIAYRDSNGKL
Ga0081455_1071736513300005937Tabebuia Heterophylla RhizosphereYVYRKLTFSSSLIILLLGFLPGCSTQPQTHPLDTKAVPRDAEFLAECSIKGVMACKVMSALSGDYGAEKRSACIAYRDSNWRLVEQCGSLPARQP*
Ga0075417_1005061713300006049Populus RhizosphereMARARLIYLYRKLTFSSFLVILLLEASAWLCSTQPQTHPLDTKPIPRDAQFLEECSIKGVMACRVMSALSGDYGAERRSECIAYRDSNFKLVEQCGSL
Ga0075417_1044367213300006049Populus RhizosphereMVRAHRIYLYRKLTFSSSLVILLLELLPGCSTQPQSHPLDTRPIPREAQFLEECSIKGVMACRVMSALSGDYGAEQRSDCIAYRDSNFKLVEQCGSLPATQP*
Ga0066659_1051562123300006797SoilLIYLYRKLTFSPSLVILLLELLPGCSTQPQTHPLMTRPIPRDAQFLEECSIKGVWPVVMSALSGDYGAERRSECIAYRDSNFKLVEQCGSLPATQP*
Ga0075430_10028540723300006846Populus RhizosphereMVRAHRIYLYRKLTFSSSLVILLLELLPGCSTQPQSHPLDTKPIPRDAQFLEECSIKGVMACRVMSALSGDYGAERRSDCIAYRDSNFKLVEQCGSLPATQP*
Ga0075431_10046301523300006847Populus RhizosphereMIRARLIYLYRKLTFSSSLVILLLELLPGCSTQPQSHPLMTRPIPSDAQFLEECSIKGVMACRVMSALSGDYGAERRSDCIAYRDSNFKLVE
Ga0075431_10055872323300006847Populus RhizosphereMVRARLIYLYRKLTFSSSLVILLLELLPGCSTQPQSHPLDTRPIPRDAQFLEECSIKGVMACRVMSALSGDYGAERRSDCIAYRDSNFKLVEQCGSLPATQP*
Ga0075431_10074104213300006847Populus RhizosphereMVRAHRIYLYRKLTFSSSLVILLLELLPGCSTQPQSHPLDTKPIPRDAQFLEECSIKGVMACRVMSALSGDYGAERRSECIAYRDSNFKLVEQCGSLPATQP*
Ga0075433_1055228513300006852Populus RhizosphereMVRARLTYLYRKLTFSSSLVILLLELLPGCSTQPQSHPLDTKPIPRDAQFLEECSIKGVMACRVMSALSGDYGAERRSDCIAYRDSNFKLVEQCGSLPATQP*
Ga0075433_1154198623300006852Populus RhizosphereALLGLLPGCSTQPQSHPLMTRPIPPDAQFLEECSIKGVMACRVMSALSGDYGAERHSSCIAYRDSSAKLVEQCGSLPATQP*
Ga0075434_10015549623300006871Populus RhizosphereMIRARLIYLYRKLTFSSSLVILLLELLPGCSTQPQSHPLDTKPIPRDAQFLEECSIKGVMACRVMSALSGDYGAERRSDCIAYRDSNFKLVEQCGSLPATQP*
Ga0075435_10014869423300007076Populus RhizosphereMIRARLIYLYRKLTFSSSLVILLLELLPGCSTQPQSHPLMTRPIPSDAQFLEECSIKGVMACRVMSALSGDYGAERRSDCIAYRDSNFKLVEQCGSLPATQP*
Ga0066710_10048889143300009012Grasslands SoilVVRARLIYLYRKLTFSSSLVILLLELLPGCSTQPQSHPLDTRPIPRDAQVLEECSIKGVMACRVMSALSGDYGAERRSECIAYRDSNFKLVEQCGSLPATQP
Ga0105098_1000862433300009081Freshwater SedimentMLRGRLTHLVRKLLIPSSLAIFLLGFQPGCSTQPQTHPRDTARIPKDAQFLTECAIKGAMGCRLMSALSGDYGAEKRGACIAYRDRNLKLVEQCGSLPATDPDP*
Ga0075418_1029993223300009100Populus RhizosphereMARARLIYLYRKLTFSSFLVILLLEASAWLCSTQPQTHPLDTKPIPRDAQFLEECSIKGVMACRVMSALSGDYGAERRSECIAYRDSNFKLVEQCGSLPATQP*
Ga0075418_1209199013300009100Populus RhizosphereMVRARPIYIYRKLTFSSSLIILLLVFLPGCSTQPQTHPLDTKAVPRDAEFLAECSIKGVMACKIMSALSGDYGAEKRSACIAYRDSNWRLVEQCGSLPARQP*
Ga0114129_1227621913300009147Populus RhizosphereMARARLIYLYRKLTFSSFLVILLLEASAWLCSTQPQTHPLDTKPIPRDAQFLEECSIKGVMACRVMSALSGDYGAERRSECIAYRD
Ga0105092_1000475333300009157Freshwater SedimentMLRGRLTHLVRKLLIPSSLAIFLLGLQPGCSTQPQTHPRDTARIPKDAQFLTECSIKGAMGCRLMSALSGDYGAEKRGACIAYRDRNLKLVEQCGSLPATDPDP*
Ga0105092_1003544123300009157Freshwater SedimentMSSLAILLLGMQPACSTQPQTHPRDTARIPRDAQFLTECSIKGAMACSLTSALSGDYGAEKRPACIAYRDRNGKLVEQCGSLPATDP*
Ga0105092_1008699923300009157Freshwater SedimentVVHARLIYFHRKLMVSFPQLILLLALLPGCSTQPQSHPRETAPVPQDAQFLAECSIKGVLGCSLTSALSGDYGAEKRGACIAYRDRNGKLVEQCGSLPATHP*
Ga0105092_1049820923300009157Freshwater SedimentMPSLSLILIVLVLLPACSTQPQTHPRDTASIPRDAQFLTECSIKGIMACSLTSALSGDYGAEKRPACIAYRDRNLKLVEQCGSLPATDP*
Ga0105092_1050935913300009157Freshwater SedimentVALARPIYVYRKLTFSSSLIILLLGFLPGCSTQPQTHPLDTKAVPRDAEFLAECSIKGVMACKIMSALSGDYGAEKRSACIAYRDSNWRLVEQCGSLPARQP*
Ga0105104_1026436523300009168Freshwater SedimentMVRARPIYVYRKLTFSSSLIILLLGSLPGCSTQPQTHPLDTKSVPRDAEFLAECSIKGVMACKIMSALSGDYGAEKRSACIAYRDSNWRLVEQCGSLPARQP*
Ga0105104_1040819123300009168Freshwater SedimentVTRARPIYLYRRLTFSSFLIILLQLLPGCSTQPQTHPLDTKPVPRDAQFLAECSIKGVMACRVMSALSGDYGAERRSDCIAYRDSNWKLVEQ
Ga0126374_1015684723300009792Tropical Forest SoilYRKLTFSSSLVILLLGLLPGCSAQPQSHPLDTKPVPPDAQFLTECSIKGVMACKFMSAISGDYGAEKRSACIAYRDSNGKLVEQCGSVPARQP*
Ga0126374_1045651823300009792Tropical Forest SoilMFCAHPVYLYRKLTFSSSLAILLLGLLPGCSAQPQTHPLDTKPVPPDAQFLTECSIKGVMACKFMSAMSGDYGAEKRSACIAYRDSNGTLIEQRGSLPARQP*
Ga0126380_1068690213300010043Tropical Forest SoilMVWARSISVYRKLTFSSSLLILLLGLLPSCSAQPQSHPLDTKPVPPDAQFLTECSIKGVMACKFMSAISGDYGAEKRSACIAYRDSNGKLVEQCGSVPARQP*
Ga0126380_1183150713300010043Tropical Forest SoilMVWARPVYLYRKLTFSSSLVILLLGLLPGCSAQPQTHPLDTKSVPPDAQFLTECSIKGVMACKFMSAMSGDYGAEKRSACIAYRDS
Ga0126382_1057184123300010047Tropical Forest SoilMVWARSISVYRKLTFSSSLVILLLGLVPSCSAQPQSHPLDTKPVPPDAQFLTECSIKGVMACKFMSAISGDYGAEKRSACIAYRDSNGKLVEQCGSVPARQP*
Ga0126382_1132361013300010047Tropical Forest SoilFSSSLIILLLGFLLGCSTQPQTHPLDTKPVPRDAEFLAECSIKGVMACKIMSALSGDYGAEKRSACIAYRDSNWRLVEQCGSVPAKQP*
Ga0126382_1165162023300010047Tropical Forest SoilCCKLAFSSSLIILLLGFLLGCSTQPQTHPLDTKSVPRDAEFLTECSIKGVMACKIMSALSGDYGAEKRSACIAYRDSNWRLVEQCGSLPARQP*
Ga0126370_1020673613300010358Tropical Forest SoilMFCAHPVYLYRKLTFSSSLAILLLGLLPGCSAQPQTHPLDTKPVPPDAQFLTECSIKGVMACKFMSAMSGDYGAEKRSACIAYRDSNGTLVEQCGSVPARQP*
Ga0126372_1003470343300010360Tropical Forest SoilMFCAHPVYLYRKLTFSSSLVILLLGLLPSCSAQPQSHPLDTKPVPPDAQFLTECSIKGVMACKFMSAISGDYGAEKRSACIAYRDSNGTLVEQCGSLPARQP*
Ga0126378_1064926513300010361Tropical Forest SoilMFCAHPVYLYRKLTFSSSLAILLLGLLPGCSAQPQTHPLDTKPVPPDAQFLTECSIKGVMACKFMSAISGDYGAEKRSACIAYRDSNGTLIEQCG
Ga0126377_1088973423300010362Tropical Forest SoilMFRACPNRRYCKLAFSSSLIILLLGFLLGCSTQPQTHPLDTKSVPRDAEFLTECSIKGVMACKIMSTLSGDYGAEKRSACIAYRDSNWRLVEQCGSLPARQP*
Ga0126377_1102873513300010362Tropical Forest SoilMVWARSIYLYRKLTFSSSLVILLLGLLPGCSAQPQSHPLDTKPVPPDAQFLTECSIKGVMACKFMSAISGDYGAEKRSACIAYRDSNGKLVEQCGSVPARQP*
Ga0126377_1270215023300010362Tropical Forest SoilMFCAHPVYLYRKLTFSSSLAILLLGLLPGCSAQPQTHPLDTKPVPPDAQFLTECSIKGVMACKFMSAISGDYGAEKRSACIAYRDSNG
Ga0126379_1042170523300010366Tropical Forest SoilMVWARSISVYRKLTFSSSLLILLLGLLPSCSAQPQSHPLDTKPVPPDAQFLTECSIKGVMACKFMSAMSGDYGAEKRSACIAYRDSNGKLVEQCGSVPARQP*
Ga0126381_10092313623300010376Tropical Forest SoilMVWARSISVYRKLTFSSSLVILLLGLLPGCSAQPQSHPLDTKPVPPDAQFLTECSIKGVMACKFMSAISGDYGAEKRSACIAYRDSNGTLVEQCGSVPARQP*
Ga0126383_1048608213300010398Tropical Forest SoilMFTRKLTFSSSLVILLLGLLPGCSAQPQSHPLDTKPVPPDAQFLTECSIKGVMACKFMSAMSGDYGAEKRSACIAYRDSNGTLIEQCGSLPARQP*
Ga0126383_1087847023300010398Tropical Forest SoilMVWARSIYVYGKLTFSSSLVILLLGLLPSCSAQPQSHPLDTKPVPPDAQFLTECSIKGVMACKFMSAISGDYGAEKRSACIAYRDSNGKLVEQCGSVPARQP*
Ga0137349_100435613300012160SoilMAQARPIRPYRKLTFSSCLVILLLELLPGCSTQPQTHPLDTKTIPRDAQFLAECSIKGVMACRVMSALSGDYGAEKRSACIAYRDSSFKLVEQCGSLPATQP*
Ga0137374_1041280623300012204Vadose Zone SoilMVRARPIRLYRKLTFSSSLVILLLEFLSGCSTQPQTHPLMTRPIPSDAQFLEECSIKGVMACKVMSALSGDYGAERRSDCIAYRDSSFKLVEQCGSLPATQP*
Ga0137381_1122906523300012207Vadose Zone SoilMARARLTYVYRKLTFSSSLVILLLELLPGCSTQPQTHPLMTRPIPSDAQFLEECSIKGVMACRVMSALSGDYGAERRSDCIAYRDSNFKLVEQCGSLPATQP*
Ga0137376_1011271933300012208Vadose Zone SoilVVRARLIYLYRKLTFSSSLVILLLELLPGCSTQPQSHPLDTRPIPRDAQFLEECSIKGVMACRVMSALSGDYGVERRSECIAYRDSNFKLVE
Ga0137367_1014162423300012353Vadose Zone SoilMVRARPIRLYRKLTFSSSLVILLLEFLSGCSTQPQTHPLMTRPIPSDAQFLEECSIKGVMACKVMSALSGDYDAERRSDCIAYRDSSFKLVEQCGSLPATQP*
Ga0137368_1073524913300012358Vadose Zone SoilMVRARLTYLYRKLTFSSSLVILLLELLPGCSTQPQTHPLMTRPIPSDAQFLEECSIKGVMACKVMSALSGDYGAERRSDCIAYRDSSFKLVEQCGSLPATQP*
Ga0137385_1044418123300012359Vadose Zone SoilMARARLTYLYRKLTFSPSLVILLLELLPGCSTQPQTHPLMTRPIPSDAQFLEECSIKGVMACRVMSALSGDYGAERRSECIAYRDSNFKLVEQCGSLPATQP*
Ga0137358_1025685223300012582Vadose Zone SoilMAGAYLIYLYRKLLVSCSLVIQLLVLLPGCSTQPQSHPLDTAPIPSDAEFLTECSTKGILACRVMSALSGDYGAERRSACIAYRDSNFKLVEQCGSLPATQP*
Ga0137394_1009420513300012922Vadose Zone SoilLMVRARLIYLYRKLTFSSSLVILLLELLPGCSTQPQSHPLDTRPIPRDAQFLEECSIKGVMACRVMSALSGDYGAERRSDCIAYRDSNFKLVEQCGSLPATQP*
Ga0137410_1194554713300012944Vadose Zone SoilHLHRKLTFSTSLVIALLGLLPGCSTQPQSHPLMTRPIPPDAQFLEECSIKGVMACRVMSALSGDYGAERHSSCIAYRDSSAKLVEQCGSLPAMQP*
Ga0126375_1056790023300012948Tropical Forest SoilMFCAHPVYLYRKLTFSSSLVILLLGLLPGCSAQPQSHPLDTKPVPPDAQFLTECSIKGVMACKFMSAMSGDYGAEKRSACIAYRDSNGTLIEQRGSLPARQP*
Ga0126375_1123769133300012948Tropical Forest SoilMLLLGFLLGCSTQPQTHPLDTKSVPRDAEFLTECSIKGVMACKFMSAMSGDYGAEKRSACIAYRDSNGKLVEECGSVPARQP*
Ga0126375_1144728713300012948Tropical Forest SoilMVWARSISVYRKLTFSSSLVILLLGLVPSCSAQPQSHPLDTKPVPPDAQFLTECSIKGVMACKFMSAISGDYGAEKRSACIAY
Ga0126369_1142130313300012971Tropical Forest SoilMVWARSIYVYRKLTFSSSLVILLLGLLPGCSAQPQSHPLDTKPVPPDAQFLTECSIKGVMACKFMSAISGDYGAEKRSACIAYRDSNGKLV
Ga0126369_1237214323300012971Tropical Forest SoilMFCAHPVYLYRKLTFSSSLAILLLGLLPGCSAQPQTHPLDTKPVPPDAQFLTECSIKGVMACKFMSAISGDYGAEKRSACIAYRDSNGKLV
Ga0182036_1073207513300016270SoilLYRKLLVSFSLVILVLVLLPGCSTQPQSHPLDTAPIPPDAKFLTECSIKGILACRAMSALSGDYGAERRSACIAYRDSSFRLVEQCGSLPATQP
Ga0182040_1092871123300016387SoilYLHLKLLVTSSLVILLLVLLPGCSTQPQSHPLDTAPIPPDAKFLTECSIKGILACRAMSALSGDYGAERRSACIAYRDSSFRLVEQCGSLPATQP
Ga0184608_1023751823300018028Groundwater SedimentMAQARPIRLYFSACLVVLLLELLPGCSTQPQTHPLDTRPIPRDAQFLTECSIRGVMACRVMSALSGDYGAERRSDCIAYRDSNFKLVEQCGSLPAKQP
Ga0184638_101419823300018052Groundwater SedimentMAQARPIRLYFSACLVVLLLELLPGCSTQPQTHPLDTRPIPRDAQFLTECSIRGVMACRVMSALSGDYGAERRSDCIAYRDSDFKLVEQCGSLPATQP
Ga0184621_1001532133300018054Groundwater SedimentMAQARPIRLYFSACLVVLLLELLPGCSTQPQTHPLDTRPIPRDAQFLTECSIRGVMACRVMSALSGDYGAERRSDCIAYRDSNFKLVEQCGSLPATQP
Ga0187773_1102766513300018064Tropical PeatlandMVSPLIILTLGPVPGCSTQPQTHPLDTRPIPSDAQFLPECSIRGIVACNLMSTLSGDYGAERRSSCIAYRDSNAKVVEQC
Ga0184635_1000386863300018072Groundwater SedimentMAQARPIRLYFSACLVVLLLELLPGCSTQPQTHPLDTRPIPRDAQFLTECSIRGVMACKVMSALSGDYGAERHSGCIAYRDSNFKLVEQCGSLPATQP
Ga0184635_1001613533300018072Groundwater SedimentFSACLVVLLLELLPGCSTQPQTHPLDTRPIPRDAQFLTECSIRGVMACRVMSALSGDYGAERRSDCIAYRDSDFKLVEQCGSLPATQP
Ga0184624_1002452443300018073Groundwater SedimentMAQARPIRPYRKLTFSSCLVILLLELLPGCSTQPQTHPLDTRPIPRDAQFLTECSIRGVMACKVMSALSGDYGAERHSGCIAYRDSNFKLVEQCGSLPATQP
Ga0184612_1002120743300018078Groundwater SedimentMAQARPIRPYRKLTFSSCLVILLLELLPGCSTQPQPHPLDTRPIPRDAQFLTECSIRGVMACRVMSALSGDYGAERRSDCIAYRDSDFKLVEQCGSLPATQP
Ga0210379_1011055323300021081Groundwater SedimentLMAQARPIRPYRKLTFSSCLVILLLELLPGCSTQPQTHPLDTRPIPRDAQFLTECSIRGVMACRVMSALSGDYGAERRSDCIAYRDSNFKLVEQCGSLPATQP
Ga0126371_1206099813300021560Tropical Forest SoilRSISVYRKLTFSSSLVILLLGLLPGCSAQPQSHPLDTKPVPPDAQFLTECSIKGVMACKFMSAISGDYGAEKRSACIAYRDSNGTLIEQCGSLPARQP
Ga0124853_140322823300024056Freshwater WetlandsVVQAPLIHVYRKLVTLSPLVILLLGLLPGCSTQPQSHPLMTRPIPPDAQFLEECSIKGVMACKVMSALSGDYGAERHSSCIAYRDTSAKLVEQCGSLPATKP
Ga0207665_1048438713300025939Corn, Switchgrass And Miscanthus RhizosphereMAGANLIYLYRKLLVSSSLVILLLVLLPGCSTQPQSHPLDTAPIPSDAKFLTECSTKGILACRVMSALSGDYGAERRSACIAYRDSNFKLVEQCGSLPATQP
Ga0210116_106626213300025959Natural And Restored WetlandsVASLSPSYIYPDFIASSSLIVALLGFVPGCSTQPQTHPLDTRSIPRDAQFLQECSTKAALACSLMSALSGDYSAEHRSACIAYRDSSFKLIEQCGSLPAKQP
Ga0209887_100305153300027561Groundwater SandMVSLSLIIALLGLLPGCSTQPQTHPLDTRPIPRDAQFLTECSIKGVMACRVMSALSGDYGAERRSDCIAFRDSNFKLVEQCGSLPATQP
Ga0209466_101029533300027646Tropical Forest SoilMVWARSISVYRKLTFSSSLVILLLGLVPSCSAQPQSHPLDTKPVPPDAQFLTECSIKGVMACKFMSAMSGDYGAEKRSACIAYRDSNGKLVEQCGSVPARQP
Ga0209799_100013533300027654Tropical Forest SoilMVWARSIYVYRKLTFSSSLVILLLGLLPGCFTQPQTHPLDTKPVPPDAQFLTECSIKGVMACKFMSAISGDYGAEKRSACIAYRDSNGTLVEQCGSVPARQP
Ga0209819_1000109393300027722Freshwater SedimentMLRGRLTHLVRKLLIPSSLAIFLLGFQPGCSTQPQTHPRDTARIPKDAQFLTECSIKGAMGCRLMSALSGDYGAEKRGACIAYRDRNLKLVEQCGSLPATDPDP
Ga0209819_1001518923300027722Freshwater SedimentMSSLAILLLGMQPACSTQPQTHPRDTARIPRDAQFLTECSIKGAMACSLTSALSGDYGAEKRPACIAYRDRNGKLVEQCGSLPATDP
Ga0209814_1035579113300027873Populus RhizosphereMVRAHRIYLYRKLTFSSSLVILLLELLPGCSTQPQSHPLDTKPIPRDAQFLEECSIKGVMACRVMSALSGDYGAERRSECIAYRDSNFKLVEQCGSLPATQP
Ga0209465_1003771323300027874Tropical Forest SoilMFCAHPVYLYRKLTFSSSLAILLLGLLPGCSAQPQSHPLDTKPVPPDAQFLTECSIKGVMACKFMSAISGDYGAEKRSACIAYRDSNGTLVEQCGSVPARQP
Ga0209481_1055819523300027880Populus RhizosphereMIRARLIYLYRKLTFSSSLVILLLELLPGCSTQPQSHPLDTKPIPRDAQFLEECSIKGVMACRVMSALSGDYGAERRSDCIAYRDSNFKLVEQCGSLPATQP
Ga0209889_100020743300027952Groundwater SandMVSLSLIIALLGLLPGCSTQPQTHPLDTRPIPRDAQFLTECSIKGVMACRVMSALSGDYGAERRSDCIAYRDSNFKLVEQCGSLPATQP
Ga0307469_1234199813300031720Hardwood Forest SoilMAGAYLIYLYRKLLVSSSLVILLLVLLPGCSTQPQSHPLDTAPIPSDAKFLTECSTKGILACRVMSALSGDYGAERRSACIAYRDSNFKLVEQCGSLPATQP
Ga0306921_1036803223300031912SoilMAGAHLIYLHLKLLVSSSLVILLLVLLPGCSTQPQSHPLDTAPIPPDAKFLTECSIKGILACRAMSALSGDYGAERRSACIAYRDSSFRLVEQCGSLPATQP
Ga0307470_1061609223300032174Hardwood Forest SoilMAGARPIHLYRKLTFSTSLVIALLGLLPGCSTQPQSHPLMTRPIPPDAQFLEECSIKGVMACRVMSALSGDYGAERHSSCIAYRDSSAKLVEQCGSLPATQP
Ga0307472_10005677323300032205Hardwood Forest SoilMAGARPIHLYRKLTFSSSLVIALLGLLPGCSTQPQSHPLMTRPIPPDAQFLEECSIKGVMACRVMSALSGDYGAERHSSCIAYRDSSAKLVEQCGSLPATQP
Ga0364945_0010920_1732_20403300034115SedimentMAQARPIRPYRKLTFSSCLVILLLELLPGCSTQPQTHPLDTKTIPRDAQFLAECSIKGVMACRVMSALSGDYGAEKRSACIAYRDSSFKLVEQCGSLPATQP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.