Metagenome / Metatranscriptome Family F089704

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089704
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	88 residues
Representative Sequence	MTDMNVPARNNYQIKIVYQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLDEPGNGPV
Number of Associated Samples	80
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.63 %
% of genes near scaffold ends (potentially truncated)	26.85 %
% of genes from short scaffolds (< 2000 bps)	75.93 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.815 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (81.481 % of family members)
Environment Ontology (ENVO)	Unclassified (83.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (91.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.91% β-sheet: 27.27% Coil/Unstructured: 56.82%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF12833	HTH_18	26.85
PF03401	TctC	19.44
PF13180	PDZ_2	11.11
PF13365	Trypsin_2	9.26
PF03449	GreA_GreB_N	1.85
PF02754	CCG	1.85
PF00929	RNase_T	0.93
PF00884	Sulfatase	0.93
PF14707	Sulfatase_C	0.93
PF13378	MR_MLE_C	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	19.44
COG0247	Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF	Energy production and conversion [C]	1.85
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	1.85
COG2048	Heterodisulfide reductase, subunit B	Energy production and conversion [C]	1.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.81 %
Unclassified	root	N/A	10.19 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.81 %
Unclassified	root	N/A	10.19 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.81 %
Unclassified	root	N/A	10.19 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	88.89 %
Unclassified	root	N/A	10.19 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	86.11 %
Unclassified	root	N/A	10.19 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	50.00 %
Unclassified	root	N/A	10.19 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.78 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium SG8_40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	34.26 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	15.74 %
Unclassified	root	N/A	10.19 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009597\|Ga0105259_1161289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	546	Open in IMG/M
3300009609\|Ga0105347_1465595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	548	Open in IMG/M
3300009610\|Ga0105340_1118513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1074	Open in IMG/M
3300009678\|Ga0105252_10024515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2179	Open in IMG/M
3300009678\|Ga0105252_10092948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1201	Open in IMG/M
3300011391\|Ga0137331_1013265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	780	Open in IMG/M
3300011397\|Ga0137444_1002706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	2062	Open in IMG/M
3300011399\|Ga0137466_1000681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2766	Open in IMG/M
3300011402\|Ga0137356_1078844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	627	Open in IMG/M
3300011403\|Ga0137313_1003075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	3371	Open in IMG/M
3300011405\|Ga0137340_1018044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1287	Open in IMG/M
3300011405\|Ga0137340_1034663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	946	Open in IMG/M
3300011406\|Ga0137454_1022285	Not Available	864	Open in IMG/M
3300011409\|Ga0137323_1001421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6424	Open in IMG/M
3300011413\|Ga0137333_1012407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1851	Open in IMG/M
3300011413\|Ga0137333_1049461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	953	Open in IMG/M
3300011413\|Ga0137333_1072732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	789	Open in IMG/M
3300011416\|Ga0137422_1002336	All Organisms → cellular organisms → Bacteria → Proteobacteria	4123	Open in IMG/M
3300011416\|Ga0137422_1022762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1478	Open in IMG/M
3300011419\|Ga0137446_1001777	All Organisms → cellular organisms → Bacteria → Proteobacteria	3225	Open in IMG/M
3300011419\|Ga0137446_1052578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	913	Open in IMG/M
3300011420\|Ga0137314_1037242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1182	Open in IMG/M
3300011421\|Ga0137462_1001570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3653	Open in IMG/M
3300011422\|Ga0137425_1074606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	798	Open in IMG/M
3300011423\|Ga0137436_1035008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1265	Open in IMG/M
3300011424\|Ga0137439_1080720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	684	Open in IMG/M
3300011425\|Ga0137441_1018011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1442	Open in IMG/M
3300011425\|Ga0137441_1091448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	729	Open in IMG/M
3300011427\|Ga0137448_1004694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2601	Open in IMG/M
3300011427\|Ga0137448_1023660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1436	Open in IMG/M
3300011428\|Ga0137456_1119994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	692	Open in IMG/M
3300011432\|Ga0137428_1073303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	939	Open in IMG/M
3300011433\|Ga0137443_1031094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1402	Open in IMG/M
3300011434\|Ga0137464_1220395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	576	Open in IMG/M
3300011435\|Ga0137426_1008185	All Organisms → cellular organisms → Bacteria → Proteobacteria	2375	Open in IMG/M
3300011435\|Ga0137426_1062710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	995	Open in IMG/M
3300011436\|Ga0137458_1286005	Not Available	503	Open in IMG/M
3300011441\|Ga0137452_1005228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3928	Open in IMG/M
3300011441\|Ga0137452_1219212	Not Available	646	Open in IMG/M
3300011441\|Ga0137452_1306468	Not Available	530	Open in IMG/M
3300011442\|Ga0137437_1012362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2940	Open in IMG/M
3300011443\|Ga0137457_1335136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	516	Open in IMG/M
3300011444\|Ga0137463_1140795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	908	Open in IMG/M
3300011445\|Ga0137427_10102763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1155	Open in IMG/M
3300011445\|Ga0137427_10155788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	941	Open in IMG/M
3300012035\|Ga0137445_1098324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	593	Open in IMG/M
3300012038\|Ga0137431_1060918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1037	Open in IMG/M
3300012039\|Ga0137421_1022824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1550	Open in IMG/M
3300012129\|Ga0137345_1002182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1742	Open in IMG/M
3300012129\|Ga0137345_1036167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	628	Open in IMG/M
3300012133\|Ga0137329_1002610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1658	Open in IMG/M
3300012134\|Ga0137330_1002511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1720	Open in IMG/M
3300012134\|Ga0137330_1003743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1501	Open in IMG/M
3300012134\|Ga0137330_1031819	Not Available	676	Open in IMG/M
3300012137\|Ga0137346_1007884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1099	Open in IMG/M
3300012143\|Ga0137354_1045921	Not Available	692	Open in IMG/M
3300012146\|Ga0137322_1007146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1372	Open in IMG/M
3300012168\|Ga0137357_1019172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1341	Open in IMG/M
3300012171\|Ga0137342_1000330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5048	Open in IMG/M
3300012173\|Ga0137327_1011153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1746	Open in IMG/M
3300012228\|Ga0137459_1006433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3281	Open in IMG/M
3300012228\|Ga0137459_1032130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1480	Open in IMG/M
3300012228\|Ga0137459_1135574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	721	Open in IMG/M
3300012228\|Ga0137459_1258337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	503	Open in IMG/M
3300012232\|Ga0137435_1247556	Not Available	542	Open in IMG/M
3300012670\|Ga0137335_1006071	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300014864\|Ga0180068_1088677	Not Available	519	Open in IMG/M
3300014870\|Ga0180080_1056057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	661	Open in IMG/M
3300014871\|Ga0180095_1018790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1095	Open in IMG/M
3300014872\|Ga0180087_1005068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	2171	Open in IMG/M
3300014872\|Ga0180087_1024930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1076	Open in IMG/M
3300014873\|Ga0180066_1000145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5551	Open in IMG/M
3300014875\|Ga0180083_1083586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	689	Open in IMG/M
3300014876\|Ga0180064_1033223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1008	Open in IMG/M
3300014880\|Ga0180082_1011222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1788	Open in IMG/M
3300014883\|Ga0180086_1113931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	694	Open in IMG/M
3300015248\|Ga0180079_1003700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1362	Open in IMG/M
3300015251\|Ga0180070_1000865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	2129	Open in IMG/M
3300015253\|Ga0180081_1005317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1616	Open in IMG/M
3300015253\|Ga0180081_1040420	Not Available	774	Open in IMG/M
3300015254\|Ga0180089_1122629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	541	Open in IMG/M
3300015256\|Ga0180073_1078310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	700	Open in IMG/M
3300015257\|Ga0180067_1029838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1089	Open in IMG/M
3300018059\|Ga0184615_10712707	Not Available	509	Open in IMG/M
3300018063\|Ga0184637_10089064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1896	Open in IMG/M
3300018079\|Ga0184627_10000777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	12421	Open in IMG/M
3300018083\|Ga0184628_10005486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6052	Open in IMG/M
3300018083\|Ga0184628_10071369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1766	Open in IMG/M
3300018084\|Ga0184629_10002618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6850	Open in IMG/M
3300018084\|Ga0184629_10177714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1092	Open in IMG/M
3300018084\|Ga0184629_10268455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	895	Open in IMG/M
3300019228\|Ga0180119_1059756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1047	Open in IMG/M
3300020060\|Ga0193717_1111548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	851	Open in IMG/M
3300021081\|Ga0210379_10000658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	11536	Open in IMG/M
3300027362\|Ga0208320_1000169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	8964	Open in IMG/M
3300027513\|Ga0208685_1007727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2737	Open in IMG/M
3300027513\|Ga0208685_1101288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	619	Open in IMG/M
3300027533\|Ga0208185_1010496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2316	Open in IMG/M
3300027533\|Ga0208185_1026444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1431	Open in IMG/M
3300028803\|Ga0307281_10184781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	744	Open in IMG/M
3300033233\|Ga0334722_10433815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	947	Open in IMG/M
3300034147\|Ga0364925_0007712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3194	Open in IMG/M
3300034149\|Ga0364929_0099730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	914	Open in IMG/M
3300034151\|Ga0364935_0023281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1691	Open in IMG/M
3300034354\|Ga0364943_0010933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	2708	Open in IMG/M
3300034354\|Ga0364943_0023557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1922	Open in IMG/M
3300034354\|Ga0364943_0097862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	1021	Open in IMG/M
3300034354\|Ga0364943_0334986	Not Available	577	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	91.67%
Terrestrial	Environmental → Terrestrial	8.33%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Sediment	88.89%
Floodplain	Environmental → Terrestrial → Floodplain	6.48%
Freshwater	Environmental → Aquatic → Freshwater	2.78%
Soil	Environmental → Terrestrial → Soil	1.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified	88.89%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	6.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.85%
Lake	Environmental → Aquatic → Freshwater → Lake	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	88.89%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	6.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.85%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	81.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.41%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	6.48%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009597	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300011391	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT163_2	Environmental	Open in IMG/M
3300011397	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT319_2	Environmental	Open in IMG/M
3300011399	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT842_2	Environmental	Open in IMG/M
3300011402	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2	Environmental	Open in IMG/M
3300011403	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300011406	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT539_2	Environmental	Open in IMG/M
3300011409	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2	Environmental	Open in IMG/M
3300011413	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT231_2	Environmental	Open in IMG/M
3300011416	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300011421	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2	Environmental	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011424	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT200_2	Environmental	Open in IMG/M
3300011425	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012035	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT338_2	Environmental	Open in IMG/M
3300012038	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012129	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT530_2	Environmental	Open in IMG/M
3300012133	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT121_2	Environmental	Open in IMG/M
3300012134	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT142_2	Environmental	Open in IMG/M
3300012137	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT560_2	Environmental	Open in IMG/M
3300012143	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT790_2	Environmental	Open in IMG/M
3300012146	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT400_2	Environmental	Open in IMG/M
3300012168	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT860_2	Environmental	Open in IMG/M
3300012171	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT466_2	Environmental	Open in IMG/M
3300012173	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012670	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT293_2	Environmental	Open in IMG/M
3300014864	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231A'_16_10D	Environmental	Open in IMG/M
3300014870	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT560_16_10D	Environmental	Open in IMG/M
3300014871	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_1Da	Environmental	Open in IMG/M
3300014872	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10D	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300014876	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10D	Environmental	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300015248	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT530_16_10D	Environmental	Open in IMG/M
3300015251	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT293_16_10D	Environmental	Open in IMG/M
3300015253	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT590_16_10D	Environmental	Open in IMG/M
3300015254	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10D	Environmental	Open in IMG/M
3300015256	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10D	Environmental	Open in IMG/M
3300015257	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_10D	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300019228	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300027362	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299 (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0105259_11612891	3300009597	Soil	MRMTDMNVPARSNYQIRIVYQQPSSTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLD
Ga0105347_14655952	3300009609	Soil	MTDMDVPARNNYQIKIVYQHPSSTDSSGKVVLATDIVTTRTAVVDIAARLQKIFPKPEHLVFVHVLERPGQPLQVAWETLDEPGNGPV*
Ga0105340_11185133	3300009610	Soil	MTDMNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLDEPGNGPV*
Ga0105252_100245154	3300009678	Soil	LNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHVLERPGQPLQVAWETLDEPGNGPV*
Ga0105252_100929481	3300009678	Soil	MTDMNVPARSNYQIRIVYQQPSSTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLP
Ga0137331_10132652	3300011391	Soil	MTDMDVPARNNYQIKIVYQHPSPTVSSGKVVLATDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERSGQPRQVAWETLDEPGNGPV*
Ga0137444_10027063	3300011397	Soil	MNVPALNNYQIKIVYQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERSGQPRQVAWEALDEPGNGPV*
Ga0137466_10006813	3300011399	Soil	MSDMNVPALNNYQIKIVYQQLSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLECPGQPLQVAWETLDEAGNGPV*
Ga0137356_10788442	3300011402	Soil	DMNAPARNNYQIKIVYQHPSPTVSSGKVVLATDIVTTRTAVVDIAARLQKIFPKPEHRVFVHLLERSGQPCPVAWETLDEPGNGPV*
Ga0137313_10030751	3300011403	Soil	MRMTDMNVPARSNYQIRIVYQQPSSTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLP
Ga0137340_10180443	3300011405	Soil	MTDMNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPL
Ga0137340_10346633	3300011405	Soil	MRMTDMNVPARSNYQIRIVYQQPSSTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERSAQPRQVAWEALDEPGNGPV*
Ga0137454_10222852	3300011406	Soil	MSDMNAPARNNYQIKIVYQHPSPTVSSGKVVLATDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERSGQPLPVAWETLDEPGNGPV*
Ga0137323_10014212	3300011409	Soil	MTDMNVPARNKYQITIVCQQSSQTESSWKDVLTTDIVTTRSDVVDIAARLQRIFPKPEYLVSVHLLERSGQPLPVAWETREEPGSGPV*
Ga0137333_10124074	3300011413	Soil	MSDMNVPALNNYQIKIVYQQLSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERSGQPRQVAWEALDEPGNGPV*
Ga0137333_10494611	3300011413	Soil	PPPIKRMTDMNVPARNKYQITIVCQQSSQTESSWKDVLTTDIVTTRSDVVDIAARLQRIFPKPEYLVSVHLLERSGQPLQVAWETPDEPGNGPV*
Ga0137333_10727322	3300011413	Soil	MTDMNVPALNNYQIKIVHKQPSPTDSSGKVVLTTDIVTTRTAIVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLDEPGNGPV*
Ga0137422_10023363	3300011416	Soil	MRMTDMNVPARSNYQIRIVYQQPSSTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLDEPGNGPV*
Ga0137422_10227623	3300011416	Soil	MNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAW
Ga0137446_10017775	3300011419	Soil	MNIPARNKYQIKVVCQQSSPAESSWKDVLTTDIVTTRTSVVDIAARLQGIYPKPEHLVFVHLLERSDQPLQVAWETPDEPGNGPV*
Ga0137446_10525782	3300011419	Soil	MNIRARNKYQIKVVCQQSSPAESSWKDVLTTDIVTTRTAVVDIAERLQRIFPKPEHLVFVRLLEHSGQPLQVAWETPEEPGNGPV*
Ga0137314_10372423	3300011420	Soil	MTDMNVPARNKYQITIVCQQSSQTESSWKDVLTTDIVTTRTDVVDIAARLQRIFPKPEYLVSVHLLERSGQPLPGAWETREDPGSGPV*
Ga0137462_10015703	3300011421	Soil	MTDKNFPARNKYQIRVVCMQSAPADSSWKDVLTTEIVSTRTSVVDIAARLQGIYPKPEHLVFVHLLARPGEPLRVAWETPDEPGNGTV*
Ga0137425_10746062	3300011422	Soil	MTDMNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPIAWETLDEPGNGPV*
Ga0137436_10350082	3300011423	Soil	MADMNIPARNKYQIKIVCQQSSPTESSWKDVLTTDIVTTRTDVVDIAARLQRIFPKPEHLVSVHLLERSGQPLPVAWETPDEPGNGPV*
Ga0137439_10807202	3300011424	Soil	MTDMNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHRVFVHLLERPGQPLQVAWETLDEAGNGPV*
Ga0137441_10180112	3300011425	Soil	MSDMNVPALNNYQIKIVYQQLSPTDSSGKVVLATDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERPGQPLQVAWETLDETGNGPV*
Ga0137441_10914482	3300011425	Soil	MTDKNFPARNKYQIRVVCMQSAPADSSWKDVLTTEIVSTRTSVVDIAARLQGIYPKPEHLVFVHLLARSGEPLRVAWETPDEPDNGTV*
Ga0137448_10046941	3300011427	Soil	KRKTDMNVPALNNYQIKIVYQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERSGQPRQVAWEALDEPGNGPV*
Ga0137448_10236602	3300011427	Soil	MTDMNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHVLERPGQPLQVAWETLDEPGNGPV*
Ga0137456_11199941	3300011428	Soil	IPALPPTMRMTDMNVPARSNYQIRIVYQQPSSTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLDEPGNGPV*
Ga0137428_10733031	3300011432	Soil	MTDMNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQP
Ga0137443_10310941	3300011433	Soil	KIVYQHPSPTVSSGKVVLATDIVTTRTAVVDIAARLQKSFPKPEHLVFVHLLECPGQPLQVAWETLDEAGNGPV*
Ga0137464_12203952	3300011434	Soil	MSDMNVPALNNYQIKIVYQQLSPTDSSGKVVLTTDIVTTRTAVVDIAARLQRIFPKPEHLVFVHLLERPGQPLQVAWETLDEAGNGPV*
Ga0137426_10081853	3300011435	Soil	GRMPAPPPIKRMTDMNVPALNNYQIKIVYQHPSSTDSSGKVVLATDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLDEPGNGPV*
Ga0137426_10627103	3300011435	Soil	MTDMNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERSGQPRQVAWEALDEPGNG
Ga0137458_12860051	3300011436	Soil	MSDMNVPALNNYQIKIVYQQLSPTDSSGKVVLTTDIVTTRTAVVDIAARLQRIFPKPEHRVFVHLLERPGQPLQVAWETLDEAGNGPV*
Ga0137452_10052286	3300011441	Soil	MNIPARNKYQIKVVCQQSSPAESSWKDVLTTDIVTTRTAVVDIAERLQRIFPKPEHLVFVRLLEHSGQPLQVAWETPEEPGNGPV*
Ga0137452_12192123	3300011441	Soil	MADMNIPARNKYQIKIVCQQSSPTESSWKDVLTTDIVTTRTDVVDIAARLQRIFPKPEHLVSVHLLERSGQPLPVAWESPDEPGNGPV*
Ga0137452_13064681	3300011441	Soil	MNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLDEPGNGPV*
Ga0137437_10123621	3300011442	Soil	PPPIKRMTDMNVTALNNYQIKIIHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERSGQPRQVAWEALDEPGNGPV*
Ga0137457_13351362	3300011443	Soil	GRMPAPPPIKRMTDMNVTALNNYQIKIIHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERPGQPLQVAWETLDETGNGPV*
Ga0137463_11407951	3300011444	Soil	PIKRMTDMNVPARNKYQIKIVCQQSSPTESSWKDVLTTDIVTTRTAVVDIAERLQRIFPKPEHLVFVHLLERSGQPLQITWETPEEPGNGPV*
Ga0137427_101027632	3300011445	Soil	MTDKNNPARNKYQIRVVCMQSAPADSSWKDVLTTEIVSTRTSVVDIAARLQRIYPKPEHLVFVHLLARPGEPLRVAWETPDEPGNGTV*
Ga0137427_101557883	3300011445	Soil	MTDMNVPARNNYQIKIVYQQPSPTDSSGKVVLSTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERSEQPLQVAWEALDEPGNGPV*
Ga0137445_10983241	3300012035	Soil	KTDMNVPALNNYQIKIVYQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERSGQPRQVAWEALDEPGNGPV*
Ga0137431_10609181	3300012038	Soil	MRMTDMNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLDEPGNGPV*
Ga0137421_10228242	3300012039	Soil	MPAPPPKKRKTDMNVPALNNYQIKIVYQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERSGQPRQVAWEALDEPGNGPV*
Ga0137345_10021823	3300012129	Soil	MTDMNVTARNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLVEPGNGPV*
Ga0137345_10361672	3300012129	Soil	MSDMNVPARNNYQIKIVYQHPSPTVSSGKVVLATDIVTTRTVVVDIAARLQKIFPKPEHRVFVHLLERSGQPCPVAWETLDEPGNGPV*
Ga0137329_10026103	3300012133	Soil	MRMTDMNVPARSNYQIRIVYQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLDEPGNGPV*
Ga0137330_10025112	3300012134	Soil	MTDMNVPALNNYQIKIVYQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLEHSGQPRHVAWEALDEPGNGPV*
Ga0137330_10037432	3300012134	Soil	MTDMNVPARNKYQITIVCQQSSQTESSWKNVLTTDIITTRSDVVDIAARLQRIFPKPEYLVSVHLLERSGQPLPVAWETREEPGSGPV*
Ga0137330_10318191	3300012134	Soil	MRMTDMNVPALNNYQIKIVHQQPSPTDSSGKVVLATDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLDEPGNGPV*
Ga0137346_10078842	3300012137	Soil	MTDMNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTVVVDIAARLQKIFPKPEHLVFVHLLERSGQPRQVAWEALDEPGNGPV*
Ga0137354_10459212	3300012143	Soil	MTDKNFPARNKYQIRVVCMQSAPADSSWKDVLTTEIVSTRTSVVDIAARLQGIYPKPEHLVFVHLLARSGEPLRVAWETPDEPDNG
Ga0137322_10071463	3300012146	Soil	MTDMNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTVVVDIAARLQKIFPKPEHRVFVHLLERSGQPCPVAWETLDEPGNGPV*
Ga0137357_10191723	3300012168	Soil	MSDMNAPARNNYQIKIVYQHPSPTVSSGKVVLATDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERSGQPLQVAWETLDEAGNGPV*
Ga0137342_10003305	3300012171	Soil	MTDMNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLDETGNGPV*
Ga0137327_10111531	3300012173	Soil	MTDMNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWE
Ga0137459_10064333	3300012228	Soil	MNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERSGQPRQVAWEALDEPGNGPV*
Ga0137459_10321302	3300012228	Soil	MSDMNVPALNNYQIKIVYQQLSPTDSSGKVVLTTDIVTTRTAVVDIAARLQRIFPKPEHLVFVHLLERSGQPLQVAWETLDEAGNGPV*
Ga0137459_11355742	3300012228	Soil	MTDKNNPARNKYQIRVVCMQSAPADSSWKDVLTTEIVSTRTSVVDIAARLQRIYPKPEHLVFVHLLARSGEPLRVAWETPDEPDNGTV*
Ga0137459_12583371	3300012228	Soil	MTDMNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVYIAARLQRIFPKPEHLVFVHLLERPGQPLQVAWETLDEAGNGPV*
Ga0137435_12475562	3300012232	Soil	MNIRARNKYQIKVVCQQSSPAESSWKDVLTTDIVTTRTSVVDIAARLQGIYPKPEHLVFVHLLERSDQPLQVAWE
Ga0137335_10060713	3300012670	Soil	MTDMNVPARNNYQIKIVYQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLDEPGNGPV*
Ga0180068_10886772	3300014864	Soil	MTDMNVPALNNYQIKIVYQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLDEPGNGPV*
Ga0180080_10560572	3300014870	Soil	MSDMNAPARNNYQIKIVYQHPSPTVSSGKVVLATDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLDEPGNGPV*
Ga0180095_10187902	3300014871	Soil	MSDMNVPARNNYQIKIVYQHPSSTDSSGKVVLATDIVTTRTAVVDIAARLQKIFPKPEHLVFVHVLERPGQPLQVAWETLDEPGNGPV*
Ga0180087_10050683	3300014872	Soil	MTDMNVPARNNYQIKIVYQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERSGQPRQVAWEALDEPGNGPV*
Ga0180087_10249301	3300014872	Soil	RMTDMNVPARNKYQITIVCQQSSQTESSWKDVLTTDIVTTRSDVVDIAARLQRIFPKPEYLVSVHLLERSGQPLPVAWETREEPGSGPV*
Ga0180066_10001454	3300014873	Soil	MTDMNVPARNKYPITIVCQQSSQTESSWKDVLTTDIVTTRSDVVDIAARLQRIFPKPEYLVSVHLLERSGQPLPVAWETREEPGSGPV*
Ga0180083_10835862	3300014875	Soil	MNVPALNNYQIKIVYQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERSGQPHQVAWEALDEPGNGPV*
Ga0180064_10332231	3300014876	Soil	MTDMNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERPGQPLPVAWETPEEPGSGPV*
Ga0180082_10112222	3300014880	Soil	MTDKNNPARNKYQIRVVCMQSAPADSSWKDVLTTEIVSTRTSVVDIAARLQGIYPKPEHLVFVHLLARPGEPLRVAWETPDEPGNGTV*
Ga0180086_11139311	3300014883	Soil	NNYQIKIVYQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERSGQPHQVAWEALDEPGNGPV*
Ga0180079_10037002	3300015248	Soil	MTDMNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHRVFVHLLERSGQPCPVAWETLDEPGNGPV*
Ga0180070_10008652	3300015251	Soil	MTDMNVPALNNYQIKIVYQQLSPTDSSGKVVLTTDIVTTRTAVVDIAARLQRIFPKPEHRVFVHLLERPGQPLQVAWETLDEAGNGPV*
Ga0180081_10053171	3300015253	Soil	MNVPALNNYQIKIVYQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERPGQPLQVAWETLDEAGNGPV*
Ga0180081_10404202	3300015253	Soil	MSDMNAPARNNYQIKIVYQHPSPTVSSGKVVLATDIVTTRTAVVDIAARLQKIFPKPEHRVFVHLLERSGQPCPVAWETLDEAGNGPV*
Ga0180089_11226291	3300015254	Soil	MTDMNVPALNNYQIKIVYQHPSPTVSSGKVVLATDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLDEPGNGP
Ga0180073_10783102	3300015256	Soil	MRMTDMNVPARSNYQIRIVYQQPSSTDSSGKVVLATDIVTTRTAVVDIAARLQKIFPKPEHRVFVHLLERSGQPLPVAWETLDEPGNGPV*
Ga0180067_10298383	3300015257	Soil	MTDMNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHRVFVHLLERSGQPCPVAWETLDEAGNGPV*
Ga0184615_107127072	3300018059	Groundwater Sediment	MTDLDISARNKHQIKIVCQQLSPTEPSWKDVLTTEMVTTRTAFVDTAARLQRIFPKPEHRVTVHLLERPGQPRQVAWETPDEPGNSPM
Ga0184637_100890643	3300018063	Groundwater Sediment	MNTPARNKYQIKIVCQQSSPTDSLWQDVLTTDIVATRTAVVDIAARLQSVFPKPEHLVIVHLLEPSGQLLPVAWETPEKPGNDPV
Ga0184627_100007775	3300018079	Groundwater Sediment	MADMNTPARNKYQIKIVCQQSSPTDSLWQDVLTTDIVATRTAVVDIAARLQSVFPKPEHLVIVHLLEPSGQLLPVAWETPEKPGNDPV
Ga0184628_100054867	3300018083	Groundwater Sediment	MPAPPPKKRKTDMNVPALNNYQIKIVYQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERSGQPHQVAWEALDEPGNGPV
Ga0184628_100713692	3300018083	Groundwater Sediment	MTDKNFPARNKYQIRVVCMQSAPADSSWKDVLTTEIVSTRTSVVDIAARLQGIYPKPEHLVFVHLLARSGEPLRVAWETPDEPDNGTV
Ga0184629_100026183	3300018084	Groundwater Sediment	MPAPPPKKRKTDMNVPALNNYQIKIVYQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLEHSGQPRQVAWEALDEPGNGPV
Ga0184629_101777142	3300018084	Groundwater Sediment	MNIPARNKYQIKVVCQQSSPAESSWKDVLTTDIVTTRTSVVDIAARLQGIYPKPEHLVFVHLLERSDQPLQVAWETPEEPGNGPV
Ga0184629_102684552	3300018084	Groundwater Sediment	MNIRARNKYQIKVVCQQSSPAESSWKDVLTTDIVTTRTAVVDIAERLQRIFPKPEHLVFVRLLEHSGQPLQVAWETPEEPGNGPV
Ga0180119_10597562	3300019228	Groundwater Sediment	PALPPTMRMTDMNVPARSNYHIRIVYQQPSSTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLDEPGNGPV
Ga0193717_11115483	3300020060	Soil	MRMTDMNVPARSNYQIRIVYQQPSSTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLDDP
Ga0210379_100006586	3300021081	Groundwater Sediment	MPAPPPKKRKTDMNVPALNNYQIKIVYQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERSGQPRQVAWEALDEPGNGPV
Ga0208320_10001694	3300027362	Soil	MPAPPPIKRMTDMNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLDEPGNGPV
Ga0208685_10077271	3300027513	Soil	MRMTDMNVPARSNYQIRIVYQQPSSTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETL
Ga0208685_11012882	3300027513	Soil	MPAPPPKKRMTDMDVPARNNYQIKIVYQHPSSTDSSGKVVLATDIVTTRTAVVDIAARLQKIFPKPEHLVFVHVLERPGQPLQVAWETLDEPGNGPV
Ga0208185_10104963	3300027533	Soil	MRMTDMNVPARSNYQIRIVYQQPSSTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLDEPGNGPV
Ga0208185_10264441	3300027533	Soil	MTDMDVPARNNYQIKIVYQHPSSTDSSGKVVLATDIVTTRTAVVDIAARLQKIFPKPEHLVFVHVLERPGQPLQVAWETLDEPGNGPV
Ga0307281_101847812	3300028803	Soil	MTDMNVPARNKYQIKIVCQQSSPTESSWKDVLTTDIVTTRTAVVDIAERLQRIFPKPEHLVFVHLLERAGQPLQVAWETPEEPANGPV
Ga0334722_104338152	3300033233	Sediment	MKRMTDKNIQARNKYEIKVVCQQSSPAESSWKDVLTTEIDATRTSVVDIAARLQRVYPKPEHLVFVHLLDRSGQPREVAWETPEEPGNDPE
Ga0364925_0007712_2064_2321	3300034147	Sediment	MNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHVVFVHLLERSGQPLPVAWETLDEPGNGPV
Ga0364929_0099730_2_241	3300034149	Sediment	MPAPPPKKRKTDMNVPALNNYQIKIVYQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERSGQ
Ga0364935_0023281_413_670	3300034151	Sediment	MNVPALNNYQIKIVHQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHVLERPGQPLQVAWETLDEPGNGPV
Ga0364943_0010933_1366_1623	3300034354	Sediment	MNVPALNNYQIKIVYQQPSPTDSSGKVVLTTDIVTTRTAVVDIAARLQKIFPKPEHLVFVHLLERSGQPRQVAWEALDEPGNGPV
Ga0364943_0023557_312_569	3300034354	Sediment	MNIRARNKYQIKVVCQQSSPAESSWKDVLTTDIVTTRTSVVDIAARLQGIYPKPEHLVFVHLLERSDQPLQVAWETPEEPGNGPV
Ga0364943_0097862_642_908	3300034354	Sediment	MTDMNVPARNKYQIKIVCQQSSPTESSWKDVLTTDIVTTRTAVVDIAERLQRIFPKPEHLVFVHLLEHSGQPLQVAWETPEEPGNGPV
Ga0364943_0334986_12_278	3300034354	Sediment	MADMNIPARNKYQIKIVCQQSSPTESSWKDVLTTDIVTTRTDVVDIAARLQRIFPKPEHLVSVHLLERSGQPLPVAWETPDEPGNGPV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089704

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences