Metagenome / Metatranscriptome Family F089764

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089764
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	106 residues
Representative Sequence	MSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Number of Associated Samples	79
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	52.34 %
% of genes near scaffold ends (potentially truncated)	41.67 %
% of genes from short scaffolds (< 2000 bps)	70.37 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.370 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (70.370 % of family members)
Environment Ontology (ENVO)	Unclassified (90.741 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (94.444 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.79% β-sheet: 3.67% Coil/Unstructured: 49.54%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF10685	KGG	14.81
PF13362	Toprim_3	2.78
PF00145	DNA_methylase	2.78
PF07750	GcrA	2.78
PF00149	Metallophos	1.85
PF04448	DUF551	1.85
PF13884	Peptidase_S74	0.93
PF04404	ERF	0.93
PF08299	Bac_DnaA_C	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	2.78
COG5352	Uncharacterized conserved protein	Function unknown [S]	2.78
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
All Organisms	root	All Organisms	29.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
cellular organisms	root	All Organisms → cellular organisms	18.52 %
Viruses	superkingdom	All Organisms → Viruses	11.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	18.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.11 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.11 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.56 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.11 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.11 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.93 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.93 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.93 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.11 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.93 %
Peptostreptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae	0.93 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.93 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.11 %
Peptoanaerobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae → Peptoanaerobacter	0.93 %
Roseomonas ludipueritiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas ludipueritiae	0.93 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.93 %
unclassified Xanthobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter → unclassified Xanthobacter	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.11 %
Xanthobacter sp. YC-JY1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter → unclassified Xanthobacter → Xanthobacter sp. YC-JY1	0.93 %
Peptoanaerobacter stomatis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae → Peptoanaerobacter → Peptoanaerobacter stomatis	0.93 %
Roseomonas ludipueritiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas ludipueritiae	0.93 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000439\|TBL_comb48_EPIDRAFT_1004470	All Organisms → cellular organisms → Bacteria → Proteobacteria	8893	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1008381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5891	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1008728	Not Available	5742	Open in IMG/M
3300002092\|JGI24218J26658_1003053	Not Available	4006	Open in IMG/M
3300003375\|JGI26470J50227_1000540	All Organisms → cellular organisms → Bacteria	15244	Open in IMG/M
3300003375\|JGI26470J50227_1003419	All Organisms → cellular organisms → Bacteria	4813	Open in IMG/M
3300003375\|JGI26470J50227_1004237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas ludipueritiae	4187	Open in IMG/M
3300003789\|Ga0007835_1006691	All Organisms → Viruses → Predicted Viral	1111	Open in IMG/M
3300003789\|Ga0007835_1006812	Not Available	1099	Open in IMG/M
3300003798\|Ga0007842_1001992	Not Available	1708	Open in IMG/M
3300003815\|Ga0007856_1000439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4823	Open in IMG/M
3300003815\|Ga0007856_1013485	Not Available	536	Open in IMG/M
3300003820\|Ga0007863_1001121	All Organisms → cellular organisms → Bacteria	3670	Open in IMG/M
3300003820\|Ga0007863_1012322	Not Available	783	Open in IMG/M
3300003820\|Ga0007863_1017052	Not Available	632	Open in IMG/M
3300003852\|Ga0031655_10006439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6273	Open in IMG/M
3300003852\|Ga0031655_10083410	All Organisms → Viruses → Predicted Viral	1315	Open in IMG/M
3300004685\|Ga0065177_1005593	Not Available	2303	Open in IMG/M
3300004692\|Ga0065171_1057436	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300004770\|Ga0007804_1129071	Not Available	638	Open in IMG/M
3300004806\|Ga0007854_10300759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae → Peptoanaerobacter → Peptoanaerobacter stomatis	664	Open in IMG/M
3300004807\|Ga0007809_10004060	Not Available	5752	Open in IMG/M
3300004807\|Ga0007809_10072441	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300004807\|Ga0007809_10094525	Not Available	916	Open in IMG/M
3300004807\|Ga0007809_10198924	Not Available	578	Open in IMG/M
3300004807\|Ga0007809_10200112	Not Available	576	Open in IMG/M
3300006071\|Ga0007876_1149862	Not Available	583	Open in IMG/M
3300006072\|Ga0007881_1103298	Not Available	711	Open in IMG/M
3300006101\|Ga0007810_1056361	Not Available	802	Open in IMG/M
3300006103\|Ga0007813_1034254	Not Available	1113	Open in IMG/M
3300006107\|Ga0007836_1039633	Not Available	1043	Open in IMG/M
3300006108\|Ga0007862_1007245	Not Available	2682	Open in IMG/M
3300006108\|Ga0007862_1007294	Not Available	2672	Open in IMG/M
3300006108\|Ga0007862_1009264	All Organisms → Viruses → Predicted Viral	2329	Open in IMG/M
3300006108\|Ga0007862_1071263	Not Available	679	Open in IMG/M
3300006111\|Ga0007848_1078502	Not Available	614	Open in IMG/M
3300006112\|Ga0007857_1015697	Not Available	1662	Open in IMG/M
3300006115\|Ga0007816_1101097	Not Available	633	Open in IMG/M
3300006119\|Ga0007866_1073801	Not Available	633	Open in IMG/M
3300006120\|Ga0007867_1037015	Not Available	1082	Open in IMG/M
3300006120\|Ga0007867_1112199	Not Available	587	Open in IMG/M
3300006121\|Ga0007824_1082041	Not Available	609	Open in IMG/M
3300006122\|Ga0007837_1034729	Not Available	858	Open in IMG/M
3300006123\|Ga0007852_1138363	Not Available	523	Open in IMG/M
3300006128\|Ga0007828_1023105	Not Available	1306	Open in IMG/M
3300006128\|Ga0007828_1076458	Not Available	694	Open in IMG/M
3300006128\|Ga0007828_1101794	Not Available	593	Open in IMG/M
3300006129\|Ga0007834_1017591	Not Available	1972	Open in IMG/M
3300006129\|Ga0007834_1039085	Not Available	1171	Open in IMG/M
3300009151\|Ga0114962_10000220	Not Available	49378	Open in IMG/M
3300012694\|Ga0157559_1016834	Not Available	637	Open in IMG/M
3300012704\|Ga0157574_1172876	Not Available	684	Open in IMG/M
3300012749\|Ga0157566_1144625	Not Available	521	Open in IMG/M
3300013093\|Ga0164296_1044329	Not Available	2223	Open in IMG/M
3300013093\|Ga0164296_1152455	Not Available	920	Open in IMG/M
3300020686\|Ga0214194_112531	Not Available	743	Open in IMG/M
3300020688\|Ga0214239_102215	All Organisms → Viruses → Predicted Viral	2353	Open in IMG/M
3300020710\|Ga0214198_1009002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter → unclassified Xanthobacter → Xanthobacter sp. YC-JY1	1321	Open in IMG/M
3300020727\|Ga0214246_1033960	Not Available	804	Open in IMG/M
3300021124\|Ga0214199_1003328	Not Available	2317	Open in IMG/M
3300021126\|Ga0214187_1007144	Not Available	1463	Open in IMG/M
3300021127\|Ga0214193_1001318	Not Available	4724	Open in IMG/M
3300021127\|Ga0214193_1021074	Not Available	799	Open in IMG/M
3300021130\|Ga0214180_1006055	All Organisms → Viruses → Predicted Viral	1683	Open in IMG/M
3300021131\|Ga0214206_1015080	Not Available	1014	Open in IMG/M
3300021137\|Ga0214165_1020007	Not Available	1745	Open in IMG/M
3300021142\|Ga0214192_1012195	Not Available	3395	Open in IMG/M
3300021142\|Ga0214192_1065190	All Organisms → Viruses → Predicted Viral	1079	Open in IMG/M
3300021438\|Ga0213920_1031968	All Organisms → Viruses → Predicted Viral	1189	Open in IMG/M
3300025330\|Ga0208615_105598	Not Available	562	Open in IMG/M
3300025336\|Ga0208619_103453	Not Available	1141	Open in IMG/M
3300025339\|Ga0208502_1007757	Not Available	927	Open in IMG/M
3300025353\|Ga0208255_116824	Not Available	656	Open in IMG/M
3300025357\|Ga0208383_1001445	All Organisms → cellular organisms → Bacteria → Proteobacteria	3762	Open in IMG/M
3300025357\|Ga0208383_1005307	All Organisms → Viruses → Predicted Viral	1746	Open in IMG/M
3300025358\|Ga0208504_1005315	All Organisms → Viruses → Predicted Viral	2036	Open in IMG/M
3300025369\|Ga0208382_1002569	All Organisms → cellular organisms → Bacteria → Proteobacteria	4243	Open in IMG/M
3300025372\|Ga0207957_1002759	All Organisms → cellular organisms → Bacteria → Proteobacteria	3213	Open in IMG/M
3300025375\|Ga0208259_1024172	Not Available	888	Open in IMG/M
3300025381\|Ga0208871_1032674	Not Available	736	Open in IMG/M
3300025382\|Ga0208256_1017365	Not Available	1094	Open in IMG/M
3300025385\|Ga0207956_1007995	Not Available	1682	Open in IMG/M
3300025389\|Ga0208257_1000597	Not Available	10131	Open in IMG/M
3300025392\|Ga0208380_1002089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	4430	Open in IMG/M
3300025392\|Ga0208380_1052568	Not Available	588	Open in IMG/M
3300025395\|Ga0208109_1022078	Not Available	924	Open in IMG/M
3300025396\|Ga0208874_1001029	All Organisms → cellular organisms → Bacteria	8523	Open in IMG/M
3300025398\|Ga0208251_1034295	Not Available	870	Open in IMG/M
3300025402\|Ga0208876_1021124	All Organisms → Viruses → Predicted Viral	1098	Open in IMG/M
3300025410\|Ga0208875_1050323	Not Available	654	Open in IMG/M
3300025417\|Ga0208616_1000480	All Organisms → cellular organisms → Bacteria	10829	Open in IMG/M
3300025417\|Ga0208616_1008011	Not Available	1800	Open in IMG/M
3300025420\|Ga0208111_1018374	Not Available	1239	Open in IMG/M
3300025423\|Ga0208746_1058558	Not Available	599	Open in IMG/M
3300025424\|Ga0208617_1060204	Not Available	683	Open in IMG/M
3300025429\|Ga0208500_1013058	All Organisms → Viruses → Predicted Viral	1191	Open in IMG/M
3300025466\|Ga0208497_1099613	Not Available	532	Open in IMG/M
3300025598\|Ga0208379_1054445	All Organisms → Viruses → Predicted Viral	1030	Open in IMG/M
3300025598\|Ga0208379_1150988	Not Available	524	Open in IMG/M
3300025778\|Ga0208388_1001015	All Organisms → cellular organisms → Bacteria → Proteobacteria	5906	Open in IMG/M
3300025779\|Ga0208869_1034660	Not Available	610	Open in IMG/M
3300025838\|Ga0208872_1266086	Not Available	542	Open in IMG/M
3300027749\|Ga0209084_1000278	Not Available	49252	Open in IMG/M
3300027896\|Ga0209777_10539625	Not Available	854	Open in IMG/M
3300027896\|Ga0209777_11165723	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M
3300027896\|Ga0209777_11224814	Not Available	500	Open in IMG/M
3300032560\|Ga0316223_1111515	Not Available	952	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	92.59%
Lake	Environmental → Aquatic → Freshwater → Lake	6.48%
Creek	Environmental → Aquatic → Freshwater → Creek	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	71.30%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	12.04%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	6.48%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	5.56%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	3.70%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	70.37%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	12.04%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	4.63%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.63%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	3.70%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.85%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000439	Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003789	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08	Environmental	Open in IMG/M
3300003798	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07	Environmental	Open in IMG/M
3300003806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH16Oct07	Environmental	Open in IMG/M
3300003815	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07	Environmental	Open in IMG/M
3300003820	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300004685	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul08 (version 2)	Environmental	Open in IMG/M
3300004692	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (version 2)	Environmental	Open in IMG/M
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental	Open in IMG/M
3300004806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006101	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE15Jun09	Environmental	Open in IMG/M
3300006103	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09	Environmental	Open in IMG/M
3300006107	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Oct07	Environmental	Open in IMG/M
3300006108	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07	Environmental	Open in IMG/M
3300006111	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul08	Environmental	Open in IMG/M
3300006112	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08	Environmental	Open in IMG/M
3300006115	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300006120	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH25Aug08	Environmental	Open in IMG/M
3300006121	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE05Oct08	Environmental	Open in IMG/M
3300006122	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE31Jul07	Environmental	Open in IMG/M
3300006123	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH28Sep08	Environmental	Open in IMG/M
3300006128	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07	Environmental	Open in IMG/M
3300006129	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Nov07	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300012694	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES054 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012704	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES077 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012749	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES066 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300020686	Freshwater microbial communities from Trout Bog Lake, WI - 12AUG2008 epilimnion	Environmental	Open in IMG/M
3300020688	Freshwater microbial communities from Trout Bog Lake, WI - 12AUG2008 hypolimnion	Environmental	Open in IMG/M
3300020710	Freshwater microbial communities from Trout Bog Lake, WI - 20SEP2008 epilimnion	Environmental	Open in IMG/M
3300020727	Freshwater microbial communities from Trout Bog Lake, WI - 29MAY2009 hypolimnion	Environmental	Open in IMG/M
3300021124	Freshwater microbial communities from Trout Bog Lake, WI - 04OCT2008 epilimnion	Environmental	Open in IMG/M
3300021126	Freshwater microbial communities from Trout Bog Lake, WI - 24JUN2008 epilimnion	Environmental	Open in IMG/M
3300021127	Freshwater microbial communities from Trout Bog Lake, WI - 05AUG2008 epilimnion	Environmental	Open in IMG/M
3300021130	Freshwater microbial communities from Trout Bog Lake, WI - 16OCT2007 epilimnion	Environmental	Open in IMG/M
3300021131	Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 epilimnion	Environmental	Open in IMG/M
3300021137	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300021142	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 epilimnion	Environmental	Open in IMG/M
3300021438	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17 MG	Environmental	Open in IMG/M
3300025330	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE12Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025336	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025339	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025353	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH06Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025357	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025358	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025369	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025372	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025375	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22May08 (SPAdes)	Environmental	Open in IMG/M
3300025381	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025382	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025385	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025389	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025392	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025395	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025396	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025398	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE15Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025402	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH03Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025410	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH25Aug08 (SPAdes)	Environmental	Open in IMG/M
3300025417	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07 (SPAdes)	Environmental	Open in IMG/M
3300025420	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Aug08 (SPAdes)	Environmental	Open in IMG/M
3300025423	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025424	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Nov07 (SPAdes)	Environmental	Open in IMG/M
3300025429	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025466	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025598	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025778	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025779	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025838	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08 (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300032560	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18009	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TBL_comb48_EPIDRAFT_10044708	3300000439	Freshwater	MTYIPAMDLVGLSDTALVDEAAKIDMTIKALTKKLDEAKAIIRSRGVDELLGTNFRATVSTPSVRWTLDTERVKTEMGEIWYTSRCKVSQPSPSVSFKPYISLGDIQVA*
TBL_comb48_EPIDRAFT_10083817	3300000439	Freshwater	MTYIPAMDLVNLTDTALVDEAAKIDMTIKALSKKLDEAKAIIRSRGVSELMGTNFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPAPSVSFKPYLSLGEIQVA*
TBL_comb48_EPIDRAFT_10087288	3300000439	Freshwater	MSYIPTLDLFALTDTALIDEAAKLDMTIKALTKKLDEAKSIIRSRGQNELLGTNFKAVVSSPSIRWTLDTDRVKLEMGETWYTERCKVSQPSPSVSFKPYISLGEIKVA*
JGI24218J26658_10030536	3300002092	Lentic	MSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPGIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQVKIA*
JGI26470J50227_100054015	3300003375	Freshwater	MTYIPAMDLVGLSDTALVDEAAKIDMTIKALTKKLDEAKAIIRSRGVDEXLGTNFRATVSTPSVRWTLXTXRVKTEMGEIWYTSRCXVSQPSPSVSFKPYISLGDIQVA*
JGI26470J50227_10034199	3300003375	Freshwater	MTYIPAMDLVGLTDTALVDEAAKIDMTIKALSKKLDEAKAIIRSRGVSELMGTNFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPAPSVSFKPYLSLGEIQVA*
JGI26470J50227_10042379	3300003375	Freshwater	MSYIPTLDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0007835_10066911	3300003789	Freshwater	MTYIPAMDLVGLSDTALVDEAAKIDMTIKALTKKLDEAKAIIRSRGVDELLGTNFRATVSTPSVRWTLDTERVKTEMGEIWYTSRCKVSQPSPSVSFKPYISLGNIQVA*
Ga0007835_10068122	3300003789	Freshwater	MSLIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0007842_10019922	3300003798	Freshwater	MTYIPAMDLVGLTDTALVDEAAKIDMTIKALSKKLDEAKAIIRSRGVSEVMGTNFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPAPSVSFKPYLSLGEIQVA*
Ga0007864_10192251	3300003806	Freshwater	KLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0007856_10004399	3300003815	Freshwater	PTLDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0007856_10134851	3300003815	Freshwater	MSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0007863_10011211	3300003820	Freshwater	MSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEIYGTNFKAVISTPSLRWTLDTDRVKKEMGETWYTERCKISQPSPAV
Ga0007863_10123222	3300003820	Freshwater	MSYIPTLDLFALADTALIDEAAKLDMTIKALTKKLDEAKSIIRSRGQNELLGTNFKAVVSSPSIRWTLDTDRVKLEMGETWYTERCKVSQPSPSVSFKPYISLGEIKVA*
Ga0007863_10170522	3300003820	Freshwater	MSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0031655_100064394	3300003852	Freshwater Lake Sediment	MSLIPTLDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0031655_100834103	3300003852	Freshwater Lake Sediment	MTYIPAMDLVGLSDXALVDXAAKIDMTIKALTKKLDEAKAIIRSRGVDELLGTNFRATVSTPSVRWTLDTERVKTEMGEIWYTSRCKVSQPSPSVSFKPYISLGDIQVA*
Ga0065177_10055932	3300004685	Freshwater	MTYIPAMDLVGLTDTALVDEAAKIDMTIKALSKKLDEAKAIIRSRGVSELMGTNFKAIVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPAPSVSFKPYLSLGEIQVA*
Ga0065171_10574362	3300004692	Freshwater	MTYIPAMDLVGLSDTALVDEAAKIDMTIKALTKKLDEAKAIIRSRGVDELLGTNFKATVSTPSVRWTLDTERVKTEMGEIWYTSRCKVSQPSPSVSFKPYISLGDIQVA*
Ga0007804_11290711	3300004770	Freshwater	TALVDEAAKIDMTIKALSKKLDEAKAIIRSRGVSEVMGTNFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPAPSVSFKPYLSLGEIQVA*
Ga0007854_103007591	3300004806	Freshwater	MTYIPAMDLVGLTDTALVDEAAKIDMTIKALSKKLDEAKAIIRSRGVSELMGTNFKATVSLPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPAPSVSFKPYLSLGEIQVA*
Ga0007809_100040605	3300004807	Freshwater	MRLTIVKSLAINLTLTTQKETNMSYIPTLDLFALADTALIDEAAKLDMTIKALTKKLDEAKSIIRSRGQNELLGTNFKAVVSSPSIRWTLDTDRVKLEMGETWYTERCKVSQPSPSVSFKPYISLGEIKVA*
Ga0007809_100724411	3300004807	Freshwater	TYIPAMDLVGLTDTALVDEAAKIDMTIKALSKKLDEAKAIIRSRGVSELMGANFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPAPSVSFKPYLSLGEIQVA*
Ga0007809_100945251	3300004807	Freshwater	MSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0007809_101989241	3300004807	Freshwater	MSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGESWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0007809_102001121	3300004807	Freshwater	MEKKMSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0007876_11498622	3300006071	Freshwater	MSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPGLRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0007881_11032981	3300006072	Freshwater	LTEKKMSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0007810_10563611	3300006101	Freshwater	SKKLDEAKAIIRSRGVSELMGTNFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPAPSVSFKPYLSLGEIQVA*
Ga0007813_10342542	3300006103	Freshwater	MSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEIYGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0007836_10396333	3300006107	Freshwater	MEKKMSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0007862_10072451	3300006108	Freshwater	KALTKKLDEAKSIIRSRGQNELLGTNFKAVVSSPSIRWTLDTDRVKLEMGETWYTERCKVSQPSPSVSFKPYISLGEIKVA*
Ga0007862_10072941	3300006108	Freshwater	MEKKMSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLD
Ga0007862_10092643	3300006108	Freshwater	MDLVGLSDTALVDEAAKIDMTIKALTKKLDEAKAIIRSRGVDELLGTNFRATVSTPSVRWTLDTERVKTEMGEIWYTSRCKVSQPSPSVSFKPYISLGDIQVA*
Ga0007862_10712632	3300006108	Freshwater	TALIDEAAKLDMTIKALTKKLDEAKSIIRSRGQSELLGTNFKAVVSSPSIRWTLDTDRVKLEMGETWYTERCKVSQPSPSVSFKPYISLGEIKVA*
Ga0007848_10785022	3300006111	Freshwater	MEKKMSLIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0007857_10156976	3300006112	Freshwater	MEKKMSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLNEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPY
Ga0007816_11010971	3300006115	Freshwater	EAAKIDMTIKALTKKLDEAKAIIRSRGVDELLGTNFRATVSTPSVRWTLDTERVKTEMGEIWYTSRCKVSQPSPSVSFKPYISLGNIQVA*
Ga0007866_10738011	3300006119	Freshwater	MEKKMSLIPTLDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0007867_10370154	3300006120	Freshwater	MTYIPAMDLVGLTDTALVDEAAKIDMTIKALSKKLDEAKAIIRSRGVSEVMGTNFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVS
Ga0007867_11121992	3300006120	Freshwater	MSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIK
Ga0007824_10820412	3300006121	Freshwater	MSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEIYGTNFKAVISTPGLRWTLDTDRVKKEMGETWYTERCKISQPSPAVSF
Ga0007837_10347291	3300006122	Freshwater	IPTLDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0007852_11383631	3300006123	Freshwater	MSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEIYGTNFKAVISTPSLRWTLDTDRVKKEMGETWYTERCKISQ
Ga0007828_10231052	3300006128	Freshwater	MEKKMSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEIYGTNFKAVISTPGLRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0007828_10764581	3300006128	Freshwater	MEKKMSLIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQI
Ga0007828_11017942	3300006128	Freshwater	MSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEIYGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLD
Ga0007834_10175911	3300006129	Freshwater	MEKKMSLIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLD
Ga0007834_10390852	3300006129	Freshwater	MDLVGLTDTALVDEAAKIDMTIKALSKKLDEAKAIIRSRGVSEVMGTNFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPAPSVSFKPYLSLGEIQVA*
Ga0114962_1000022039	3300009151	Freshwater Lake	LTSLASFATDLTPTTLMEKKMSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEIYGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0157559_10168343	3300012694	Freshwater	RKKMSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0157574_11728763	3300012704	Freshwater	HQWRKKMSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0157566_11446252	3300012749	Freshwater	QWRKKMSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA*
Ga0164296_10443292	3300013093	Freshwater	MTYIPTPDLLKLDDATLVDEAAKMDAMIKTLTKKLDEAKAIIRSRGNGELYGSAFKAVVSTSAVRWSLDTDRVKAEMGEDWYAARSKVSQPSPSVSFKPYVSLGEIAVA*
Ga0164296_11524551	3300013093	Freshwater	MSYIPTLDLFALADTALIDEAAKLDMMIKALTKKLDEAKSIIRSRGQTELLGNNFKAVVSSPSIRWTLDTDRVKLEMGETWYTERCKVSQPSPSVSFKPYISLGEIKVA*
Ga0214194_1125312	3300020686	Freshwater	MTYIPAMDLVGLSDTALVDEAAKIDMTIKALTKKLDEAKAIIRSRGVDELLGTNFRATVSTPSVRWTLDTERVKTEMGEIWYTSRCKVSQPSP
Ga0214239_1022155	3300020688	Freshwater	MTYIPAMDLVGLSDTALVDEAAKIDMTIKALTKKLDEAKAIIRSRGVDELLGTNFRATVSTPSVRWTLDTERVKTEMGEIWYTSRCKVSQPSPSVSFKPYISLGDIQVA
Ga0214198_10090023	3300020710	Freshwater	MTYIPAMDLVGLTDTALVDEAAKIDMTIKALSKKLDEAKAIIRSRGVSELMGTNFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPAPSVSFKPYLSLGEIQVA
Ga0214246_10339602	3300020727	Freshwater	VTNMTYIPAMDLVGLTDTALVDEAAKIDMTIKALSKKLDEAKAIIRSRGVSELMGTNFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPAPSVSFKPYLSLGEIQVA
Ga0214199_10033283	3300021124	Freshwater	MTYIPAMDLVGLTDTALVDEAAKIDMTIKALSKKLDEAKAIIRSRGVSEVMGTNFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPAPSVSFKPYLSLGEIQVA
Ga0214187_10071443	3300021126	Freshwater	MSYIPTLDLFALTDTALIDEAAKLDMTIKALTKKLDEAKSIIRSRGQNELLGTNFKAVVSSPSIRWTLDTDRVKLEMGETWYTERCKVSQPSPSVSFKPYISLGEIKVA
Ga0214193_10013183	3300021127	Freshwater	MTYIPAMDLVNLTDTALVDEAAKIDMTIKALSKKLDEAKAIIRSRGVSELMGTNFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPAPSVSFKPYLSLGEIQVA
Ga0214193_10210743	3300021127	Freshwater	MTYIPTPDLLTLDDATLVDEAAKMDAMIKTLTKKLDEAKAIIRSRGNGELYGSAFKAVVSTSAVRWSLDTDRVKAEMGEDWYAARSKVSQPSPSVSFKPYVSLGEIAVA
Ga0214180_10060554	3300021130	Freshwater	MTYIPAMDLVSLSDTALVDEAAKIDMTIKALTKKLDEAKAIIRSRGVDELLGTNFRATVSTPSVRWTLDTERVKTEMGEIWYTSRCKVSQPSPSVSFKPYISLGDIQVA
Ga0214206_10150803	3300021131	Freshwater	MSLIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGESWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0214165_10200074	3300021137	Freshwater	MDLVGLTDTALVDEAAKIDMTIKALSKKLDEAKAIIRSRGVSEVMGTNFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPAPSVSFKPYLSLGEIQVA
Ga0214192_10121952	3300021142	Freshwater	MTYIPTPDLLKLDDATLVDEAAKMDAMIKTLTKKLDEAKAIIRSRGNGELYGSAFKAVVSTPAVRWSLDTDRVKAEMGEDWYAARSKVSQPSPSVSFKPYVSLGEIAVA
Ga0214192_10651901	3300021142	Freshwater	ASFATDLTPTTQMEKKMSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPGLRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0213920_10319681	3300021438	Freshwater	TALVDEAAKMDMTIKAITKKLEEAKAIIRSHGVSELMGTNFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPSPSVSFKPYLSLGEIQVA
Ga0208615_1055981	3300025330	Freshwater	LRLTSLASFATDLTPITPMEKKMSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0208619_1034534	3300025336	Freshwater	MEKKMSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0208502_10077573	3300025339	Freshwater	MEKKMSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0208255_1168241	3300025353	Freshwater	TLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEIYGTNFKAVISTPIIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0208383_10014451	3300025357	Freshwater	MSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEIYGTNFKAVISTPSLRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0208383_10053073	3300025357	Freshwater	MSYIPTLDLFALADTALIDEAAKLDMTIKALTKKLDEAKSIIRSRGQNELLGTNFKAVVSSPSIRWTLDTDRVKLEMGETWYTERCKVSQPSPSVSFKPYISLGEIKVA
Ga0208504_10053153	3300025358	Freshwater	MTYIPAMDLVGLSDTALVDEAAKIDMTIKALTKKLDEAKAIIRSRGVDELLGTNFRATVSTPSVRWTLDTERVKTEMGEIWYTSRCKVSQPSPSVSFKPYISLGNIQVA
Ga0208382_10025699	3300025369	Freshwater	MSLIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0207957_10027599	3300025372	Freshwater	LDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0208259_10241723	3300025375	Freshwater	TLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0208871_10326742	3300025381	Freshwater	MEKKMSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEIYGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0208256_10173651	3300025382	Freshwater	IYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEIYGTNFKAVISTPSLRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0207956_10079952	3300025385	Freshwater	MSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGESWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0208257_10005975	3300025389	Freshwater	MSIIPTLDIYSLSVADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEIYGTNFKAVISTPSLRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0208380_100208910	3300025392	Freshwater	MSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0208380_10525681	3300025392	Freshwater	MEKKMSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPY
Ga0208109_10220782	3300025395	Freshwater	MEKKMSLIPTLDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0208874_10010292	3300025396	Freshwater	MTYIPAMDLVGLTDTALVDEAAKIDMTIKALSKKLDEAKAIIRSRGVSELMGTNFKAIVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPAPSVSFKPYLSLGEIQVA
Ga0208251_10342951	3300025398	Freshwater	RRDDLLRLTSLASFATDLTPITPMEKKMSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0208876_10211242	3300025402	Freshwater	MDLVGLSDTALVDEAAKIDMTIKALTKKLDEAKAIIRSRGVDELLGTNFRATVSTPSVRWTLDTERVKTEMGEIWYTSRCKVSQPSPSVSFKPYISLGNIQVA
Ga0208875_10503231	3300025410	Freshwater	MTYIPAMDLVGLTDTALVDEAAKIDMTIKALSKKLDEAKAIIRSRGVSEVMGTNFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQP
Ga0208616_100048023	3300025417	Freshwater	AKLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0208616_10080115	3300025417	Freshwater	MTYIPAMDLVGLTDTALVDEAAKIDMTIKALSKKLDEAKAIIRSSGVSEVMGTNFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPAPSVSFKPYLSLGEIQVA
Ga0208111_10183742	3300025420	Freshwater	MDLVGLTDTALVDEAAKIDMTIKALSKKLDEAKAIIRSRGVSELMGTNFKAIVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPAPSVSFKPYLSLGEIQVA
Ga0208746_10585582	3300025423	Freshwater	MSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEIYGTNFKAVISTPGLRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0208617_10602042	3300025424	Freshwater	GLTDTALVDEAAKIDMTIKALSKKLDEAKAIIRSRGVSEVMGTNFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPAPSVSFKPYLSLGEIQVA
Ga0208500_10130584	3300025429	Freshwater	MSLIPTLDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0208497_10996132	3300025466	Freshwater	LVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0208379_10544452	3300025598	Freshwater	MTYIPAMDLVGLSDTALVDEAAKIDMTIKALTKKLDEAKAIIRSRGVDELLGTNFKATVSTPSVRWTLDTERVKTEMGEIWYTSRCKVSQPSPSVSFKPYISLGDIQVA
Ga0208379_11509881	3300025598	Freshwater	AKIDMTIKALSKKLDEAKAIIRSRGVSELMGANFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPAPSVSFKPYLSLGEIQVA
Ga0208388_10010155	3300025778	Freshwater	MSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVILTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0208869_10346602	3300025779	Freshwater	FALTDTALIDEAAKLDMTIKALTKKLDEAKSIIRSRGQNELLGTNFKAVVSSPSIRWTLDTDRVKLEMGETWYTERCKVSQPSPSVSFKPYISLGEIKVA
Ga0208872_12660861	3300025838	Freshwater	IPAMDLVGLSDTALVDEAAKMDMTIKAITKKLDEAKAIIRSRGVSELMGTNFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQPAPSVSFKPYLSLGEIQVA
Ga0209084_100027836	3300027749	Freshwater Lake	MSIIPTLDIYSLSDADLVDEAAKLDLTIKALTKKLDEAKSWIRARQLDEIYGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA
Ga0209777_105396251	3300027896	Freshwater Lake Sediment	MPLSAMDNTNQTIKKVTNMTYIPAMDLVGLSDTALVDEAAKMDMTIKAITKKLDEAKAIIRSRGVSELMGTNFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVSQP
Ga0209777_111657231	3300027896	Freshwater Lake Sediment	MTYIPTPDLLTLDDATLVDEAAKMDAMIKTLTKKLDEAKAIIRSRGNGELYGSAFKAVVSTPAVRWSLDTDRVKAEMGEDWYAARSKVSQPSPSVSFKPYV
Ga0209777_112248142	3300027896	Freshwater Lake Sediment	MTYIPAMDLVGLTDTALVDEAAKIDMTIKALSKKLDEAKAIIRSRGVSELMGTNFKATVSSPGLRWSLDTDRVKLEMGEDWYVAHCKVS
Ga0316223_11115151	3300032560	Freshwater	AKLDLTIKALTKKFDEAKSWIRARQLDEICGTNFKAVISTPSIRWTLDTDRVKKEMGETWYTERCKISQPSPAVSFKPYMTLDQIKIA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089764

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences