NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F089846

Metagenome / Metatranscriptome Family F089846

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F089846
Family Type Metagenome / Metatranscriptome
Number of Sequences 108
Average Sequence Length 65 residues
Representative Sequence MDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK
Number of Associated Samples 82
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 48.15 %
% of genes from short scaffolds (< 2000 bps) 87.04 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (99.074 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater
(40.741 % of family members)
Environment Ontology (ENVO) Unclassified
(76.852 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(90.741 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 51.56%    β-sheet: 0.00%    Coil/Unstructured: 48.44%
Feature Viewer
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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A99.07 %
All OrganismsrootAll Organisms0.93 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000439|TBL_comb48_EPIDRAFT_1032888Not Available2129Open in IMG/M
3300000736|JGI12547J11936_1009107Not Available2618Open in IMG/M
3300000736|JGI12547J11936_1047184Not Available887Open in IMG/M
3300002401|B570J29611_1017193Not Available608Open in IMG/M
3300002835|B570J40625_100018290Not Available12035Open in IMG/M
3300003827|Ga0007880_1001836Not Available2978Open in IMG/M
3300004688|Ga0065169_1002724Not Available877Open in IMG/M
3300004777|Ga0007827_10088946Not Available698Open in IMG/M
3300004802|Ga0007801_10021041Not Available1992Open in IMG/M
3300004802|Ga0007801_10142354Not Available685Open in IMG/M
3300004802|Ga0007801_10171717Not Available614Open in IMG/M
3300004802|Ga0007801_10174700Not Available608Open in IMG/M
3300004806|Ga0007854_10276484Not Available699Open in IMG/M
3300004807|Ga0007809_10085131Not Available978Open in IMG/M
3300004807|Ga0007809_10242600Not Available512Open in IMG/M
3300005044|Ga0071351_1037999Not Available951Open in IMG/M
3300005069|Ga0071350_1008845Not Available2300Open in IMG/M
3300005069|Ga0071350_1124925Not Available825Open in IMG/M
3300005069|Ga0071350_1225751Not Available646Open in IMG/M
3300005069|Ga0071350_1336500Not Available537Open in IMG/M
3300005069|Ga0071350_1386631Not Available500Open in IMG/M
3300005805|Ga0079957_1020052Not Available4701Open in IMG/M
3300006071|Ga0007876_1061757Not Available1000Open in IMG/M
3300006071|Ga0007876_1131929Not Available632Open in IMG/M
3300006100|Ga0007806_1053862Not Available769Open in IMG/M
3300006104|Ga0007882_10293489Not Available525Open in IMG/M
3300006106|Ga0007833_1041831Not Available848Open in IMG/M
3300006112|Ga0007857_1010202Not Available2154Open in IMG/M
3300006113|Ga0007858_1118746Not Available538Open in IMG/M
3300006117|Ga0007818_1018143Not Available1410Open in IMG/M
3300006117|Ga0007818_1061700Not Available701Open in IMG/M
3300006120|Ga0007867_1131357Not Available539Open in IMG/M
3300006123|Ga0007852_1125704Not Available557Open in IMG/M
3300006125|Ga0007825_1121065Not Available521Open in IMG/M
3300006127|Ga0007805_1062845Not Available812Open in IMG/M
3300008105|Ga0114338_1098387All Organisms → Viruses → Predicted Viral1075Open in IMG/M
3300008105|Ga0114338_1230978Not Available608Open in IMG/M
3300008106|Ga0114339_1098727Not Available1135Open in IMG/M
3300008108|Ga0114341_10363583Not Available720Open in IMG/M
3300008112|Ga0114345_1074186Not Available1057Open in IMG/M
3300008112|Ga0114345_1143437Not Available797Open in IMG/M
3300008112|Ga0114345_1311118Not Available524Open in IMG/M
3300008115|Ga0114348_1018309Not Available1747Open in IMG/M
3300008118|Ga0114352_1006239Not Available3330Open in IMG/M
3300008118|Ga0114352_1062587Not Available768Open in IMG/M
3300008122|Ga0114359_1088972Not Available1094Open in IMG/M
3300008122|Ga0114359_1258187Not Available612Open in IMG/M
3300008261|Ga0114336_1225328Not Available768Open in IMG/M
3300012692|Ga0157571_1014082Not Available503Open in IMG/M
3300012693|Ga0157573_1107252Not Available640Open in IMG/M
3300012694|Ga0157559_1046163Not Available747Open in IMG/M
3300012699|Ga0157593_1046552Not Available539Open in IMG/M
3300012700|Ga0157576_1111483Not Available562Open in IMG/M
3300012702|Ga0157596_1044244Not Available503Open in IMG/M
3300012715|Ga0157599_1166995Not Available534Open in IMG/M
3300012721|Ga0157612_1011773Not Available1048Open in IMG/M
3300012750|Ga0157568_1070164Not Available1491Open in IMG/M
3300013093|Ga0164296_1213543Not Available741Open in IMG/M
3300013094|Ga0164297_10258994Not Available666Open in IMG/M
3300013094|Ga0164297_10303636Not Available609Open in IMG/M
3300013295|Ga0170791_14640330Not Available582Open in IMG/M
3300020492|Ga0208483_1022503Not Available706Open in IMG/M
3300020516|Ga0207935_1040608Not Available545Open in IMG/M
3300020529|Ga0208233_1035574Not Available608Open in IMG/M
3300020560|Ga0208852_1047626Not Available720Open in IMG/M
3300020560|Ga0208852_1053255Not Available668Open in IMG/M
3300020677|Ga0214169_101780Not Available1392Open in IMG/M
3300020677|Ga0214169_105672Not Available768Open in IMG/M
3300020692|Ga0214224_1008997Not Available907Open in IMG/M
3300020727|Ga0214246_1063888Not Available527Open in IMG/M
3300020731|Ga0214170_1003625Not Available3706Open in IMG/M
3300020731|Ga0214170_1011914Not Available1679Open in IMG/M
3300020731|Ga0214170_1064480Not Available512Open in IMG/M
3300020732|Ga0214201_1014431Not Available1564Open in IMG/M
3300021119|Ga0214204_1000625Not Available6193Open in IMG/M
3300021119|Ga0214204_1023590Not Available543Open in IMG/M
3300021127|Ga0214193_1000505Not Available8859Open in IMG/M
3300021138|Ga0214164_1062415Not Available776Open in IMG/M
3300021138|Ga0214164_1084100Not Available622Open in IMG/M
3300021142|Ga0214192_1074414Not Available982Open in IMG/M
3300024239|Ga0247724_1009321Not Available1460Open in IMG/M
3300024239|Ga0247724_1050329Not Available618Open in IMG/M
3300025336|Ga0208619_117239Not Available534Open in IMG/M
3300025338|Ga0208501_104054Not Available772Open in IMG/M
3300025339|Ga0208502_1021736Not Available547Open in IMG/M
3300025355|Ga0208254_1015961Not Available511Open in IMG/M
3300025385|Ga0207956_1051828Not Available506Open in IMG/M
3300025402|Ga0208876_1041495Not Available718Open in IMG/M
3300025402|Ga0208876_1072645Not Available511Open in IMG/M
3300025407|Ga0208378_1040130Not Available780Open in IMG/M
3300025410|Ga0208875_1078053Not Available502Open in IMG/M
3300025415|Ga0208868_1059160Not Available572Open in IMG/M
3300025426|Ga0208739_1020422Not Available1184Open in IMG/M
3300025435|Ga0208618_1010987Not Available2131Open in IMG/M
3300025466|Ga0208497_1065694Not Available700Open in IMG/M
3300025591|Ga0208496_1010160Not Available2727Open in IMG/M
3300025591|Ga0208496_1013266Not Available2305Open in IMG/M
3300025788|Ga0208873_1016935Not Available1272Open in IMG/M
3300027797|Ga0209107_10510691Not Available532Open in IMG/M
3300027816|Ga0209990_10317471Not Available694Open in IMG/M
3300032117|Ga0316218_1182566Not Available762Open in IMG/M
3300033816|Ga0334980_0091313Not Available1269Open in IMG/M
3300034012|Ga0334986_0348718Not Available768Open in IMG/M
3300034071|Ga0335028_0240753Not Available1100Open in IMG/M
3300034094|Ga0335014_0283571Not Available754Open in IMG/M
3300034119|Ga0335054_0265961Not Available1016Open in IMG/M
3300034272|Ga0335049_0323293Not Available1036Open in IMG/M
3300034284|Ga0335013_0433543Not Available801Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater40.74%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater18.52%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater17.59%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton12.04%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater2.78%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment1.85%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment1.85%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake0.93%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater, Plankton0.93%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment0.93%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.93%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000439Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)EnvironmentalOpen in IMG/M
3300000736Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011EnvironmentalOpen in IMG/M
3300002401Freshwater microbial communities from Lake Mendota, WI - 26JUN2009 deep hole epilimnionEnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300003827Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH29Jun09EnvironmentalOpen in IMG/M
3300004688Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Aug07 (version 2)EnvironmentalOpen in IMG/M
3300004777Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Jul07EnvironmentalOpen in IMG/M
3300004802Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA2MEnvironmentalOpen in IMG/M
3300004806Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08EnvironmentalOpen in IMG/M
3300004807Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07EnvironmentalOpen in IMG/M
3300005044Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0048EnvironmentalOpen in IMG/M
3300005069Metagenomes from Harmful Algal Blooms in Lake Erie, HABS-E2014-0024EnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300006071Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09EnvironmentalOpen in IMG/M
3300006100Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09EnvironmentalOpen in IMG/M
3300006104Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09.1EnvironmentalOpen in IMG/M
3300006106Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul07EnvironmentalOpen in IMG/M
3300006112Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08EnvironmentalOpen in IMG/M
3300006113Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Aug08EnvironmentalOpen in IMG/M
3300006117Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE08Jun09EnvironmentalOpen in IMG/M
3300006120Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH25Aug08EnvironmentalOpen in IMG/M
3300006123Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH28Sep08EnvironmentalOpen in IMG/M
3300006125Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE13Jul09EnvironmentalOpen in IMG/M
3300006127Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09EnvironmentalOpen in IMG/M
3300008105Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, sample E2014-0046-100-LTREnvironmentalOpen in IMG/M
3300008106Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-53-LTREnvironmentalOpen in IMG/M
3300008108Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NAEnvironmentalOpen in IMG/M
3300008112Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-100-LTREnvironmentalOpen in IMG/M
3300008115Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-100-LTREnvironmentalOpen in IMG/M
3300008118Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-100-LTREnvironmentalOpen in IMG/M
3300008122Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample HABS-E2014-0124-100-LTREnvironmentalOpen in IMG/M
3300008261Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NAEnvironmentalOpen in IMG/M
3300012692Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES073 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012693Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES075 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012694Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES054 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012699Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES110 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012700Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES079 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012702Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES114 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012715Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES122 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012721Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES139 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012750Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES069 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013093Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaGEnvironmentalOpen in IMG/M
3300013094Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaGEnvironmentalOpen in IMG/M
3300013295northern Canada Lakes metatranscriptome co-assemblyEnvironmentalOpen in IMG/M
3300020492Freshwater microbial communities from Lake Mendota, WI - 01JUN2011 deep hole epilimnion ns (SPAdes)EnvironmentalOpen in IMG/M
3300020516Freshwater microbial communities from Lake Mendota, WI - 30AUG2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020529Freshwater microbial communities from Lake Mendota, WI - 07SEP2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020560Freshwater microbial communities from Lake Mendota, WI - 18JUN2009 deep hole epilimnion ns (SPAdes)EnvironmentalOpen in IMG/M
3300020677Freshwater microbial communities from Trout Bog Lake, WI - 13JUN2007 epilimnionEnvironmentalOpen in IMG/M
3300020692Freshwater microbial communities from Trout Bog Lake, WI - 10SEP2007 hypolimnionEnvironmentalOpen in IMG/M
3300020727Freshwater microbial communities from Trout Bog Lake, WI - 29MAY2009 hypolimnionEnvironmentalOpen in IMG/M
3300020731Freshwater microbial communities from Trout Bog Lake, WI - 27JUN2007 epilimnionEnvironmentalOpen in IMG/M
3300020732Freshwater microbial communities from Trout Bog Lake, WI - 29MAY2009 epilimnionEnvironmentalOpen in IMG/M
3300021119Freshwater microbial communities from Trout Bog Lake, WI - 23JUN2009 epilimnionEnvironmentalOpen in IMG/M
3300021127Freshwater microbial communities from Trout Bog Lake, WI - 05AUG2008 epilimnionEnvironmentalOpen in IMG/M
3300021138Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnionEnvironmentalOpen in IMG/M
3300021142Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 epilimnionEnvironmentalOpen in IMG/M
3300024239Subsurface sediment microbial communities from gas well in Oklahoma, United States - OK STACK MC-2-EEnvironmentalOpen in IMG/M
3300025336Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Jul07 (SPAdes)EnvironmentalOpen in IMG/M
3300025338Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE09Aug07 (SPAdes)EnvironmentalOpen in IMG/M
3300025339Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul07 (SPAdes)EnvironmentalOpen in IMG/M
3300025355Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Jul07 (SPAdes)EnvironmentalOpen in IMG/M
3300025385Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul07 (SPAdes)EnvironmentalOpen in IMG/M
3300025402Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH03Jun09 (SPAdes)EnvironmentalOpen in IMG/M
3300025407Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09 (SPAdes)EnvironmentalOpen in IMG/M
3300025410Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH25Aug08 (SPAdes)EnvironmentalOpen in IMG/M
3300025415Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Oct07 (SPAdes)EnvironmentalOpen in IMG/M
3300025426Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09 (SPAdes)EnvironmentalOpen in IMG/M
3300025435Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul08 (SPAdes)EnvironmentalOpen in IMG/M
3300025466Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07 (SPAdes)EnvironmentalOpen in IMG/M
3300025591Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA2M (SPAdes)EnvironmentalOpen in IMG/M
3300025788Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH01Aug08 (SPAdes)EnvironmentalOpen in IMG/M
3300027797Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)EnvironmentalOpen in IMG/M
3300027816Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300032117Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003EnvironmentalOpen in IMG/M
3300033816Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005EnvironmentalOpen in IMG/M
3300034012Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027EnvironmentalOpen in IMG/M
3300034071Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110EnvironmentalOpen in IMG/M
3300034094Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Sep2000-rr0077EnvironmentalOpen in IMG/M
3300034119Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Jul2015-rr0166EnvironmentalOpen in IMG/M
3300034272Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2017-rr0156EnvironmentalOpen in IMG/M
3300034284Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
TBL_comb48_EPIDRAFT_103288813300000439FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKGVNPSWQLPSPETRKRKKPKLK*
JGI12547J11936_100910763300000736Freshwater And SedimentMDSNQNIFRNINKAIRAITPGVYNDAQVXNLMKIYDVIVAEKEVNPSWQLPSPEXRKRKKPKLK*
JGI12547J11936_104718413300000736Freshwater And SedimentNPFLKISPSPKKMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRLK*
B570J29611_101719323300002401FreshwaterMNSDKIFENINKAIRXITPGIYNNRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK*
B570J40625_100018290193300002835FreshwaterMNSDKIFENINKAIRAITPGIYNNRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK*
Ga0007880_100183673300003827FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAXVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKXKLK*
Ga0065169_100272413300004688FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK*
Ga0007827_1008894613300004777FreshwaterAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRLK*
Ga0007801_1002104143300004802FreshwaterMNSNKIFENINKAIRAITPGIYNDRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK*
Ga0007801_1014235413300004802FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPR
Ga0007801_1017171723300004802FreshwaterMDSNRNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRLK*
Ga0007801_1017470023300004802FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRLK*
Ga0007854_1027648423300004806FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDIIVAEKEVNPSWQLPSPETRKRKKPKLK*
Ga0007809_1008513113300004807FreshwaterMNSNKIFENINKAIRAITPGIYNNRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK*
Ga0007809_1024260023300004807FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK*VIGGIDGD
Ga0071351_103799913300005044Freshwater, PlanktonMDSNQNIFRNINKAIRAITPGVYNNAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK*
Ga0071350_100884553300005069FreshwaterMDSNQNIFRNINKAIRAITPGVYNEAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKLKLE*
Ga0071350_112492523300005069FreshwaterMDSNQNICRNIKKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRLK*
Ga0071350_122575123300005069FreshwaterMNSDKIFENINKAIREITPGIYNNRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK*
Ga0071350_133650023300005069FreshwaterKISPNKMDSNQNIFRNINKAIRAITPGVYNNAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK*
Ga0071350_138663123300005069FreshwaterMNSDKIIENINKAIRAITPGIYNDEQVGNLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKFK*
Ga0079957_102005243300005805LakeMDSNQNIFRNINKAIRAITPGVYNNAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRLK*
Ga0007876_106175723300006071FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKAKLK*
Ga0007876_113192913300006071FreshwaterEISPNKMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRLK*
Ga0007806_105386213300006100FreshwaterEISPNKMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDIIVAEKEVNPSWQLPSPETRKRKKPKLK*
Ga0007882_1029348913300006104FreshwaterMDSNQNIFRNINKAIRAITPRVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK*
Ga0007833_104183123300006106FreshwaterMDSNQNIFRNINKAIRAITPRVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKK
Ga0007857_101020213300006112FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPWERGELSIILGFKR*
Ga0007858_111874623300006113FreshwaterMNSDKIFENINKATRAITPGIYNNRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK*
Ga0007818_101814353300006117FreshwaterMNSDKIFENINKAIRAITPGIYNSRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK*
Ga0007818_106170033300006117FreshwaterFRNINKVIRAITPGVYNEAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKLKLE*
Ga0007867_113135723300006120FreshwaterMNSDKIFENINKAIRAITPGIYNNRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK*VIGDLDG
Ga0007852_112570413300006123FreshwaterKMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRLK*
Ga0007825_112106513300006125FreshwaterKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRLK*
Ga0007805_106284513300006127FreshwaterNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK*
Ga0114338_109838733300008105Freshwater, PlanktonMDSNQNIFRNINNAIRAITPGVYNDAQVENPMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK*
Ga0114338_123097813300008105Freshwater, PlanktonMNSDKIFENINKAIRAITPGIYNDEQVGNLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKFK*
Ga0114339_109872713300008106Freshwater, PlanktonIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRLK*
Ga0114341_1036358323300008108Freshwater, PlanktonMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRVK*
Ga0114345_107418613300008112Freshwater, PlanktonMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRL
Ga0114345_114343713300008112Freshwater, PlanktonMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIIAEKEVNPSWQLPSPETRKRKKPKLK*
Ga0114345_131111823300008112Freshwater, PlanktonVKRKNDSWNKVLNQPFLKISPKKMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRLR*
Ga0114348_101830933300008115Freshwater, PlanktonMDSNQNIFRNINNAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK*
Ga0114352_100623913300008118Freshwater, PlanktonNSDKIFENINKAIRAITPGIYNDRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK*
Ga0114352_106258713300008118Freshwater, PlanktonRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRLK*
Ga0114359_108897233300008122Freshwater, PlanktonMDSNQNIFRNINKAIRAITPGVYNDSQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRLK*
Ga0114359_125818723300008122Freshwater, PlanktonMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKLRLK*
Ga0114336_122532823300008261Freshwater, PlanktonMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKIKKPRLK*
Ga0157571_101408223300012692FreshwaterKVLNQPFLEISPNKMDSNQNIFRNINKAIRAITPRVYNDAQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK*
Ga0157573_110725223300012693FreshwaterMDSNKNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRLK*
Ga0157559_104616333300012694FreshwaterNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRLK*
Ga0157593_104655213300012699FreshwaterNKMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK*
Ga0157576_111148313300012700FreshwaterNQNIFRNINKAIRAITPGVYNDTQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK*
Ga0157596_104424413300012702FreshwaterSQEKNDLWNKVLNQPFLKISPKKMDSNQNIFRNINKAIRAITPGVYNDAQVENMMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK*
Ga0157599_116699523300012715FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEINPSWQLPSPETRKRKKPKLK*
Ga0157612_101177333300012721FreshwaterMDSDKIFENINKAIRAITPGIYNNRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK*
Ga0157568_107016423300012750FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEANPSWQLPSPETRKRKKPKLK*
Ga0164296_121354333300013093FreshwaterLNQPFLKISPNKMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK*
Ga0164297_1025899423300013094FreshwaterMDSNQHIFRNINKAIRAITPGVYNEAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKLKLE*
Ga0164297_1030363613300013094FreshwaterNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKGVNPSWQLPSPETRKRKKPKLK*
Ga0170791_1464033013300013295FreshwaterMDSNRNTFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRLK*
Ga0208483_102250323300020492FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK
Ga0207935_104060813300020516FreshwaterMNSDKIFENINKAIRAITPGIYNNRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK
Ga0208233_103557413300020529FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPK
Ga0208852_104762633300020560FreshwaterNKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK
Ga0208852_105325523300020560FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEINPSWQLPSPETRKRKKPKLK
Ga0214169_10178033300020677FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRLK
Ga0214169_10567213300020677FreshwaterMNSDKIFENINKAIRAITPGIYNSRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK
Ga0214224_100899723300020692FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEANPSWQLPSPETRKRKKPKLK
Ga0214246_106388813300020727FreshwaterSDKIFENINKAIRAITPGIYNNRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKL
Ga0214170_1003625123300020731FreshwaterNKMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDIIVAEKEVNPSWQLPSPETRKRKKPKLK
Ga0214170_101191453300020731FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRK
Ga0214170_106448023300020731FreshwaterMDSNKIFGNINKAIRAITPGIYNNRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK
Ga0214201_101443133300020732FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDIIVAEKEVNPSWQLPSPETRKRKKPKLK
Ga0214204_100062543300021119FreshwaterMNSNKIFENINKAIRAITPGIYNNRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK
Ga0214204_102359013300021119FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVESLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRLK
Ga0214193_1000505163300021127FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKAKLK
Ga0214164_106241513300021138FreshwaterEISPNKMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK
Ga0214164_108410013300021138FreshwaterEISPNKMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDIIVAEKEVNPSWQLPSPETRKRKKPWERGELSIILGFKR
Ga0214192_107441433300021142FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKK
Ga0247724_100932133300024239Deep Subsurface SedimentMNSDKIFENINKAIRAITPGIYNDRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK
Ga0247724_105032913300024239Deep Subsurface SedimentPFLKISPKKMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK
Ga0208619_11723923300025336FreshwaterNRFMNSDKIFENINKAIRAITPGIYNNRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK
Ga0208501_10405423300025338FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPWERGELSIILGLKR
Ga0208502_102173613300025339FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPS
Ga0208254_101596123300025355FreshwaterFMNSDKIFENINKAIRAIIPGIYNNRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK
Ga0207956_105182823300025385FreshwaterMDSNQNIFRNINKAIRAITPRVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK
Ga0208876_104149533300025402FreshwaterKVLNQPFLKISPNKMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK
Ga0208876_107264523300025402FreshwaterKIFENINKAIRAITPGIYNNRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK
Ga0208378_104013013300025407FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSP
Ga0208875_107805323300025410FreshwaterTFSENKSKKMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK
Ga0208868_105916013300025415FreshwaterNQPFLKISPKKMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPRLK
Ga0208739_102042213300025426FreshwaterKIDLWNKVLNQPFLKISPNKMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK
Ga0208618_101098713300025435FreshwaterWNKVLNQPFLKISPNKMDSNQNIFRNINQAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK
Ga0208497_106569413300025466FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETKKRKKPRLK
Ga0208496_101016073300025591FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKN
Ga0208496_101326653300025591FreshwaterMNSNKIFENINKAIRAITPGIYNDRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK
Ga0208873_101693523300025788FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPWERGELSIILGFKR
Ga0209107_1051069123300027797Freshwater And SedimentSKMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK
Ga0209990_1031747113300027816Freshwater LakeMDSNQNIFRNINKAIRAITPGVYNEAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPR
Ga0316218_118256633300032117FreshwaterTNRFMNSDKIFENINKAIRAITPGIYNNRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK
Ga0334980_0091313_56_2503300033816FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKPK
Ga0334986_0348718_538_7293300034012FreshwaterMDSDKIFENINKAIRAITPGIYNNRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK
Ga0335028_0240753_426_6203300034071FreshwaterMDSNQNIFRNINKAIRAITPGVYNNAQVENLMKIYDVIVAEIEVNPSWQLPSPETRKRKKPKLK
Ga0335014_0283571_569_7543300034094FreshwaterNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKL
Ga0335054_0265961_228_4193300034119FreshwaterMDSDKIFENINKAIRAITPGIYNSRQVENLMKIYDVIVAEKEINPSWQLPSPEERKRKRPKLK
Ga0335049_0323293_872_10363300034272FreshwaterMDSNQNIFRNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPET
Ga0335013_0433543_3_1703300034284FreshwaterNINKAIRAITPGVYNDAQVENLMKIYDVIVAEKEVNPSWQLPSPETRKRKKPKLK


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