Metagenome / Metatranscriptome Family F089998

Basic Information
Family ID	F089998
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	99 residues
Representative Sequence	VRRGVWTFVLFLLGAVVCVSAIPQPDLPETSYNEVDTPLNQAPPVVPGVRFARPAIAPVILPRQVWEAERGVSSQAIERKSAHTLVRRDLHSLQDLLCTFLI
Number of Associated Samples	86
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	60.19 %
% of genes near scaffold ends (potentially truncated)	38.89 %
% of genes from short scaffolds (< 2000 bps)	76.85 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Most Common Taxonomy
Group	Unclassified (58.333 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.148 % of family members)
Environment Ontology (ENVO)	Unclassified (35.185 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.556 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 37.69% β-sheet: 0.00% Coil/Unstructured: 62.31%
Feature Viewer

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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF09685	DUF4870	10.19
PF10543	ORF6N	3.70
PF01642	MM_CoA_mutase	3.70
PF02254	TrkA_N	1.85
PF00685	Sulfotransfer_1	1.85
PF00196	GerE	0.93
PF03544	TonB_C	0.93
PF09360	zf-CDGSH	0.93
PF13518	HTH_28	0.93
PF13469	Sulfotransfer_3	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	3.70
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.33 %
All Organisms	root	All Organisms	41.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.33 %
cellular organisms	root	All Organisms → cellular organisms	41.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.33 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	26.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.04 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.78 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.04 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.78 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.04 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.78 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001154\|JGI12636J13339_1050305	Not Available	515	Open in IMG/M
3300001180\|JGI12695J13573_1012064	Not Available	598	Open in IMG/M
3300001661\|JGI12053J15887_10100363	Not Available	1569	Open in IMG/M
3300002245\|JGIcombinedJ26739_100917513	Not Available	758	Open in IMG/M
3300004080\|Ga0062385_10071315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1587	Open in IMG/M
3300004080\|Ga0062385_10243754	Not Available	998	Open in IMG/M
3300004080\|Ga0062385_10416458	Not Available	807	Open in IMG/M
3300004082\|Ga0062384_100249143	Not Available	1076	Open in IMG/M
3300004082\|Ga0062384_100261022	All Organisms → cellular organisms → Bacteria → Acidobacteria	1056	Open in IMG/M
3300004091\|Ga0062387_101003817	Not Available	640	Open in IMG/M
3300004092\|Ga0062389_102313824	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300005174\|Ga0066680_10206333	Not Available	1243	Open in IMG/M
3300005445\|Ga0070708_100171836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2024	Open in IMG/M
3300005471\|Ga0070698_100417182	All Organisms → cellular organisms → Bacteria → Acidobacteria	1276	Open in IMG/M
3300005518\|Ga0070699_100068034	All Organisms → cellular organisms → Bacteria	3092	Open in IMG/M
3300005552\|Ga0066701_10616417	Not Available	659	Open in IMG/M
3300005598\|Ga0066706_10679134	Not Available	818	Open in IMG/M
3300005610\|Ga0070763_10027703	All Organisms → cellular organisms → Bacteria	2564	Open in IMG/M
3300005712\|Ga0070764_10017058	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3598	Open in IMG/M
3300005712\|Ga0070764_10021693	All Organisms → cellular organisms → Bacteria	3202	Open in IMG/M
3300005921\|Ga0070766_10059475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2171	Open in IMG/M
3300005995\|Ga0066790_10074435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1462	Open in IMG/M
3300006864\|Ga0066797_1066047	Not Available	1270	Open in IMG/M
3300006864\|Ga0066797_1199845	Not Available	698	Open in IMG/M
3300007788\|Ga0099795_10486913	Not Available	573	Open in IMG/M
3300009029\|Ga0066793_10657454	Not Available	596	Open in IMG/M
3300009038\|Ga0099829_10381390	Not Available	1164	Open in IMG/M
3300009038\|Ga0099829_10590474	Not Available	923	Open in IMG/M
3300009088\|Ga0099830_11770089	Not Available	516	Open in IMG/M
3300009089\|Ga0099828_10305022	Not Available	1432	Open in IMG/M
3300009143\|Ga0099792_10634942	Not Available	684	Open in IMG/M
3300009143\|Ga0099792_10661284	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	672	Open in IMG/M
3300009709\|Ga0116227_10466722	Not Available	960	Open in IMG/M
3300010341\|Ga0074045_10016899	All Organisms → cellular organisms → Bacteria → Acidobacteria	5843	Open in IMG/M
3300010343\|Ga0074044_10048136	All Organisms → cellular organisms → Bacteria → Acidobacteria	2935	Open in IMG/M
3300010343\|Ga0074044_10072100	All Organisms → cellular organisms → Bacteria → Acidobacteria	2337	Open in IMG/M
3300011269\|Ga0137392_10284936	All Organisms → cellular organisms → Bacteria → Acidobacteria	1364	Open in IMG/M
3300012096\|Ga0137389_10359965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1239	Open in IMG/M
3300012203\|Ga0137399_10206577	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1596	Open in IMG/M
3300012205\|Ga0137362_10522922	Not Available	1025	Open in IMG/M
3300012361\|Ga0137360_11267520	Not Available	637	Open in IMG/M
3300012917\|Ga0137395_10666326	Not Available	753	Open in IMG/M
3300012917\|Ga0137395_10843233	Not Available	664	Open in IMG/M
3300012929\|Ga0137404_12186173	Not Available	517	Open in IMG/M
3300014489\|Ga0182018_10014295	All Organisms → cellular organisms → Bacteria	5483	Open in IMG/M
3300014489\|Ga0182018_10075677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2002	Open in IMG/M
3300014657\|Ga0181522_11017742	Not Available	514	Open in IMG/M
3300015241\|Ga0137418_10165881	All Organisms → cellular organisms → Bacteria → Acidobacteria	1934	Open in IMG/M
3300019888\|Ga0193751_1032210	All Organisms → cellular organisms → Bacteria	2440	Open in IMG/M
3300020199\|Ga0179592_10172299	Not Available	986	Open in IMG/M
3300020199\|Ga0179592_10262515	Not Available	773	Open in IMG/M
3300020199\|Ga0179592_10318765	Not Available	688	Open in IMG/M
3300020580\|Ga0210403_10138793	All Organisms → cellular organisms → Bacteria	1984	Open in IMG/M
3300020580\|Ga0210403_11231560	Not Available	575	Open in IMG/M
3300021086\|Ga0179596_10325620	Not Available	769	Open in IMG/M
3300021170\|Ga0210400_10009981	All Organisms → cellular organisms → Bacteria	7687	Open in IMG/M
3300021171\|Ga0210405_10640538	Not Available	825	Open in IMG/M
3300021181\|Ga0210388_10135286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2132	Open in IMG/M
3300021181\|Ga0210388_11828177	Not Available	500	Open in IMG/M
3300021405\|Ga0210387_10889576	Not Available	784	Open in IMG/M
3300021407\|Ga0210383_10591875	All Organisms → cellular organisms → Bacteria → Acidobacteria	956	Open in IMG/M
3300021407\|Ga0210383_10594610	Not Available	954	Open in IMG/M
3300021420\|Ga0210394_11861942	Not Available	500	Open in IMG/M
3300021478\|Ga0210402_11412898	Not Available	623	Open in IMG/M
3300022531\|Ga0242660_1129612	Not Available	644	Open in IMG/M
3300025922\|Ga0207646_11435498	Not Available	599	Open in IMG/M
3300026273\|Ga0209881_1050234	Not Available	1026	Open in IMG/M
3300026294\|Ga0209839_10199376	Not Available	643	Open in IMG/M
3300026354\|Ga0257180_1019542	Not Available	872	Open in IMG/M
3300026499\|Ga0257181_1011070	Not Available	1211	Open in IMG/M
3300026508\|Ga0257161_1042296	Not Available	912	Open in IMG/M
3300026514\|Ga0257168_1003586	All Organisms → cellular organisms → Bacteria	2459	Open in IMG/M
3300026514\|Ga0257168_1119001	Not Available	589	Open in IMG/M
3300026551\|Ga0209648_10689813	Not Available	558	Open in IMG/M
3300026557\|Ga0179587_10077098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1974	Open in IMG/M
3300026557\|Ga0179587_10589559	Not Available	731	Open in IMG/M
3300027546\|Ga0208984_1102997	Not Available	617	Open in IMG/M
3300027610\|Ga0209528_1005798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2631	Open in IMG/M
3300027645\|Ga0209117_1032390	All Organisms → cellular organisms → Bacteria	1624	Open in IMG/M
3300027660\|Ga0209736_1000435	All Organisms → cellular organisms → Bacteria	13480	Open in IMG/M
3300027678\|Ga0209011_1040805	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300027698\|Ga0209446_1115763	Not Available	690	Open in IMG/M
3300027729\|Ga0209248_10104115	All Organisms → cellular organisms → Bacteria → Acidobacteria	855	Open in IMG/M
3300027737\|Ga0209038_10094477	Not Available	902	Open in IMG/M
3300027738\|Ga0208989_10114696	Not Available	915	Open in IMG/M
3300027745\|Ga0209908_10021234	Not Available	1234	Open in IMG/M
3300027846\|Ga0209180_10386373	Not Available	795	Open in IMG/M
3300027855\|Ga0209693_10576724	Not Available	533	Open in IMG/M
3300027862\|Ga0209701_10084313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2000	Open in IMG/M
3300027879\|Ga0209169_10201135	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300027903\|Ga0209488_10213989	Not Available	1451	Open in IMG/M
3300027908\|Ga0209006_10000785	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	29318	Open in IMG/M
3300029903\|Ga0247271_103947	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2894	Open in IMG/M
3300030760\|Ga0265762_1148203	Not Available	557	Open in IMG/M
3300031122\|Ga0170822_15047262	Not Available	597	Open in IMG/M
3300031231\|Ga0170824_107700659	Not Available	695	Open in IMG/M
3300031231\|Ga0170824_127210075	Not Available	852	Open in IMG/M
3300031525\|Ga0302326_10430903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2030	Open in IMG/M
3300031718\|Ga0307474_10089772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2293	Open in IMG/M
3300031718\|Ga0307474_10223621	All Organisms → cellular organisms → Bacteria → Acidobacteria	1437	Open in IMG/M
3300031754\|Ga0307475_10088166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2402	Open in IMG/M
3300031754\|Ga0307475_10326999	Not Available	1231	Open in IMG/M
3300031754\|Ga0307475_11457607	Not Available	526	Open in IMG/M
3300031820\|Ga0307473_10057869	All Organisms → cellular organisms → Bacteria → Acidobacteria	1876	Open in IMG/M
3300031962\|Ga0307479_10086739	All Organisms → cellular organisms → Bacteria	3031	Open in IMG/M
3300031962\|Ga0307479_11050646	Not Available	782	Open in IMG/M
3300034124\|Ga0370483_0011233	All Organisms → cellular organisms → Bacteria → Acidobacteria	2534	Open in IMG/M
3300034125\|Ga0370484_0116556	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	704	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.89%
Aquatic	Environmental → Aquatic	10.19%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.96%
Freshwater	Environmental → Aquatic → Freshwater	10.19%
Peat	Environmental → Terrestrial → Peat	0.93%
Peat Moss	Host-Associated → Plants → Peat Moss	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.56%
Loam	Environmental → Terrestrial → Soil → Loam	19.44%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.19%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.19%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.19%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	9.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.41%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	4.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.78%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.85%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.93%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.93%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300001180	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026273	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300029903	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Fen703	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12636J13339_10503052	3300001154	Forest Soil	SAVVCASAIPQPDLPETAYNEVDTPVNQTPPVVPGVRFVRPAVAPVILPRQVWEARRGVSSQALEWKSADTLVRRGPHSFQDLLCTFLI*
JGI12695J13573_10120641	3300001180	Forest Soil	ITLTTGGLSSYRLLRGYGVRRGLWTFVLLLLGVVCVSAIPQTDLPETSYNEVDTPVNQAPPVVAGSRFVRPPIATTIIPRQVCEVKLGVTAQAHDGKAAHEAVRRDSHSFQDLLCTFLI*
JGI12053J15887_101003631	3300001661	Forest Soil	VRRGVWTFVLFLLGAVVCVSAIPQPDLPETSYNEVDTPLNQAPPAVPGVRFVRPAIALVILPRQVCEVNRVVISQGLKRNSAHTAVRRDPHSLQDLLCTFLI*
JGIcombinedJ26739_1009175132	3300002245	Forest Soil	VRLLLHATEAPLKRGLWLSILLLLGAVVCASAIPQTDLPETSYNEVDTPINQAPPVVPGVKFVRPSISPVILPRQVCEALRSVGAQVHEVKTASTTVRHTDSLQDILCTFLI*
Ga0062385_100713151	3300004080	Bog Forest Soil	AVSRGFLFFVLLLLGSVICVSAIPQTDLPETSYNEVDTPVNQAPPVVPGVRFVRPAIAPVILSRQVCEALRSVGAQARERKSADTPVLRDPNSLQDLLCTFLI*
Ga0062385_102437541	3300004080	Bog Forest Soil	MLLLGAVICASAIPQTDLPETSYNEVDTPINQAPPVVPGVKLVRPSISPVILPRQVCEALRSAGAQLHELKTASTTVRHTDSLQDILCTFLI*
Ga0062385_104164581	3300004080	Bog Forest Soil	MFVLLLSGAIVCVSAIPQTDLPETSYNEVDTPVNQAPPVVSGIRFVRPTVAPVILPRQVCDVLRSVGAQAHERKSATSVPHRQHSLHDLLCTFLI*
Ga0062384_1002491432	3300004082	Bog Forest Soil	VSRGFLFFVLLLLGSVICVSAIPQTDLPETSYNEVDTPVNQAPPVVPGVRFVRPAIAPVILSRQVCEALRSVGAQARERKSADTPVLRDPNSLQDLLCTFLI*
Ga0062384_1002610222	3300004082	Bog Forest Soil	VRRGVLTFVLLLMGAVVCVFAIPQTDRPETSYNEVDTPVNQAPPVVQGIRFIRPIVAPVILPRHVCEALRGVAAQARAHRADCTPVRRDLHSLQDLLCTLLI*
Ga0062387_1010038171	3300004091	Bog Forest Soil	MLVLLLLGAVICVSAVPQTDLPETSYNEVDTPVNQAPPVVPGVRFVRPTVAPVILPRQVCEALRGVSAQAHERKSADTPVRPDPHSLQDLLCTLLI*
Ga0062389_1023138242	3300004092	Bog Forest Soil	MRRVTWTFVLVLMSAVVCVSAIPQTDLPETPYNEVDTPVNQAPPVVPGIRLTRPNVAAIILTSQVIETWRGVNSNISEYKSARTPIRYRHCPQDLLCTLLI*
Ga0066680_102063332	3300005174	Soil	VVRRGVWTLVLFLLSAVLCVSAIPQPDLPETSYNEVDTPVNQSPPVVPGVWFVRPAVAPVILPRQVWEARRGVSSQALDWKSADTLVRRDPHSFQDLLCTFLI*
Ga0070708_1001718361	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MVVLLLLGAVTCVSAIPQTDLPETCYNEVNTPVNQAPPVVPGIRFVRPTMATVVLPRQVWEARHGVGVQAPELKESYTLLRRDPHSLQDLLCTFLI*
Ga0070698_1004171823	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRRGMRFRDPQPDLPETSYNEVDTPVNQAPPVVPGVRYVRPAIASVILPRQVWEAGRGISSQAIEPKSADTLVRRDPHSLQDLLCTFLI*
Ga0070699_1000680341	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MVVLLLLGAVTCVSAIPQTDLPETCYNEVNTPVNQAPPVVPGIRFVRPTMATVVLPRQVWEARHGVGVQAPELKESYTLLRRDPHSL
Ga0066701_106164172	3300005552	Soil	MSAVLCVSAIPQPDIPETSYNEVDTPVNQSPPVVPGVRFVRPAVAPVILPRQVWEARRGVSSQAVDWKSADTLVRRDPHSFQDLLCTFLI*
Ga0066706_106791343	3300005598	Soil	MSAVLCVSAIPQPDIPETSYNEVDTPVNQSPPLVPGVRFVRPAVAPVILPRQVWEARRGVSSQALDWKSADTLVRRDSHSFQDLLCTFLI*
Ga0070763_100277031	3300005610	Soil	MFVLLLLGAVVCVSAIPQPDLPETSYNEVDTPVNQAPPVVPGIRFVRPTVAPMILPRQVCEALRGFSAQAHERKSAVTL
Ga0070764_100170584	3300005712	Soil	VRRGIWIFVLLLLGAVVCVSAIPQPDLPETSYNEVDTPVNQAPPVVPGVRFVRPTFTPVILPREVCEGLRAIGAQFHERKSATPVRRDPHSLQDILCTFLI*
Ga0070764_100216933	3300005712	Soil	MFVLLLLGAVVCVSAIPQPDLPETSYNEVDTPVNQAPPVVPGIRFVRPTVAPMILPRQVCEALRGFSAQAHERKSAVTLVRRDPHSLHDLLCTFLI*
Ga0070766_100594754	3300005921	Soil	DNLPLRSYCYIRGGAAVRQGVWTLVLFLLSAVVCVSAIPHTDLPETAYNEVDTPVNQAPPVVPGVRYVRPAIAPLILPRRVWEAGRGVSSQAIEPKSADTLVRRDSQSLHDLLCTFLI*
Ga0066790_100744353	3300005995	Soil	MKRGACCFVLLLLSAVFCVSAIPQTDLPETSYNEVDTPVNQAPPVVAGLRFVRPTVIPVAIPKEVREAVRGTSAQGYTEVADRTSVQQTSKPLQDLLCTLLI*
Ga0066797_10660472	3300006864	Soil	VRRGVWTFVLFLLGAVVCVSAIPQTDLPETSYNEVDSPLNQAPPVVRGVRFVRPAIAAVILPRQVCEAGRGINSLALERKAACTPVRRNPHSLQDLLCTFLI*
Ga0066797_11998452	3300006864	Soil	LRSYCYIHGGAAVRRGVWTFVLLLLRAVVCVSAIPQADLPETFYNEVDTPVNQAPPVVPGVRFVRPAIAAVILPRQVCEAGCGINFPALERKAACTPVRRDPHSLQDLLCTFLI*
Ga0099795_104869131	3300007788	Vadose Zone Soil	VRRAFWTFVLLLISAVICVSAIPQPDLPETSYNEVDTPVNQSPPVVPGVRFVRPAVAPVILPRQVWEARRGVSSQALDWKPADTVVRRDPHSFQDLLCTF
Ga0066793_106574541	3300009029	Prmafrost Soil	YCYIHGGAAVRRRVWTFVLLLLGTVVCVSAIPQTDLPETFYNEVDTPVNQAPPVVPGVRFVRPAIAPVILPRQVCEAGRGINSPALERKAAHTPVRRDPHSLQDLLCTFLI*
Ga0099829_103813901	3300009038	Vadose Zone Soil	LGTVTCVSAIPQTDLPETCYNEVNTPVNQAPPVVPGIRFVRPTMATVVLPRQVWEARHGVGVQAPELKESYTLLRRDPHSLQDLLCTFLI*
Ga0099829_105904742	3300009038	Vadose Zone Soil	LGTVTCVSAIPQTDLPETCYNEVNTPVNQAPPVVPGIRFVRPSMATVVLPRQVWEARHGVGVQAPELKESYALLRRDPHSLQDLLCTFLI*
Ga0099830_117700892	3300009088	Vadose Zone Soil	PETCYNEVNTPVNQAPPVVPGIRFVRPSMATVVLPRQVWEARHGVGVQAPELKESYALLRRDPHSLQDLLCTFLI*
Ga0099828_103050223	3300009089	Vadose Zone Soil	RALWMVVLLLLGTVTCVSAIPQTDLPETCYNEVNTPVNQAPPVVPGIRFVRPTMATVVLPRQVWEARHGVGVQAPELKESYTLLRRDPHSLQDLLCTFLI*
Ga0099792_106349422	3300009143	Vadose Zone Soil	MSAVVCVSAIPQPDLPETSYNEVDTPVNQAPPVVPGVRFVRPAVAPVILPRQVWEARRGVNSQALDWKSADTLVRRDPHSFQDLLCTFLI*
Ga0099792_106612841	3300009143	Vadose Zone Soil	VRRGVWILVLFLLSGVLCVSAIPQPDLPETSYNEVDTPVNQSPPVVPGVRFVRPAVAPLILPRQVWEARRGVSSQALDWKSADTIVRR
Ga0116227_104667222	3300009709	Host-Associated	MGAVVCVSAIPQPDLPETSYNEVDTPVNQAPPVVPGIRLVRPVVTASILPRQILQARSRVDVQTHDRASADVLLRPDPHSLQDLLCTLLI*
Ga0074045_100168997	3300010341	Bog Forest Soil	VRRGVWTFVLLLMAAVVCASAIPPTDLPETSYNEVDTPVNQTPPVVPGLKFVRPIVAPVILPRQVCEALRGVGGQAHKLKTDFTPVRHELHSLQDLLCTLLI*
Ga0074044_100481363	3300010343	Bog Forest Soil	MGAVVCVSAIPQTDLPETSYNEVDTPVNQTPPVVPGVKFVRPVVAPVILPRQVFEALLGVGGQAHKLKSPFTPVRHEPHSLQDLLCTLLI*
Ga0074044_100721001	3300010343	Bog Forest Soil	MFVLLLSGAIVCVSAIPQTDLPETSYNEVDTPVNQAPPVVSGIRFVRPTVAPVILPRQVCDVLHSVGAQAHERKSATSVPHRQHSLHDLLCTFLI*
Ga0137392_102849362	3300011269	Vadose Zone Soil	MVVLLLLGAVTCVSAIPQTDLPETCYNEVNTPVNQAPPVVPGIRFVRPSMATVVLPRQVWEARHGVGVQAPELKESYALLRRDPHSLQDLLCTFLI*
Ga0137389_103599652	3300012096	Vadose Zone Soil	VGRALWMVVLLLLGTVTCVSAIPQTDLPETCYNEVNTPVNQAPPVVPGIRFVRPSMATVVLPRQVWEARHGVGVQAPELKESYALLRRDPHSLQDLLCTFLI*
Ga0137399_102065773	3300012203	Vadose Zone Soil	VRHGFWTFVLLLMSAVVCVSAIPQSDLPETSYNEIDIPVNQAPPVVSGVRFVRPSLATVILSKQVGKVSRGDASQGLKRKSDHTHVRRDPHSLQDLLCTFLI*
Ga0137362_105229222	3300012205	Vadose Zone Soil	VGRRLWTFVLLLLGAVTCVSAIPQADLPETCYNEVDIPVNQAPPVVPGVRFFRPTMATAVLPRQVWEARRGVSAQAPELKEAYTLLPRDPHSLQDLLCTFVI*
Ga0137360_112675202	3300012361	Vadose Zone Soil	VRGVFWGFVPLLLGAVFCVSAVPQPDLPETSYNEVDTPVNQAPPLVAGVRFVRPTIATTILPRQVWEATRDVCAQSHERKSARTLVRADVHSSQDRLCTFLI*
Ga0137395_106663261	3300012917	Vadose Zone Soil	GVWTFVLLLMSAVLCVSAIPQPDLPETSYNEVDTPVNQSPPVVPGVRFVRPAIAPVILPKQVWEARRGVSSQALDWKPADTLVRRDPHSFQDLLCTFLI*
Ga0137395_108432331	3300012917	Vadose Zone Soil	VRQGVWTFVLFLLSAVVCVSAIPPTDLPETAYNEVDTPVNQAPPVVPGVRYVRPAIAPLILPRRVWEAGRGVSSQAIEPKSADTLVRRDPQSLQDLLCTFLI*
Ga0137404_121861732	3300012929	Vadose Zone Soil	GGTVVRRAVWTLVLFLLSTVVCVSAIPQPDLPETSYNEVDTPVNQAPPLVAGVRFVRPTIATTILPRQVWEATRDVCAQSRERKSARTLVRADVHSSQDRLCTFLI*
Ga0182018_100142957	3300014489	Palsa	MFVLLLLGGVICISAIPQTDLPETSYNEVDTPVNQAPPVVQGIKFVRPTGTPSILPRQVWEAFRGVSAQAHERKSTCTP
Ga0182018_100756773	3300014489	Palsa	MFVLLLLGAVICISAIPQTDLPETSYNEVDTPVNQAPPVVQGIKFVRPTGAPSILPRQVWEAFRGVSAQAHERKSTCTPVRRDPNSRQDVLCTFLI*
Ga0181522_110177421	3300014657	Bog	VWVFILFVLGAVICVSAIPQTDLPETSYNEVDTPVNQAPPVVPGVRFVRPSVDPVILPRQICEALRGVSAQAHERKSDAILLRRDPHSFHDLLCTFLI*
Ga0137418_101658812	3300015241	Vadose Zone Soil	VRHGFWTFVLLLMSAVVCVSAIPQSDLPETSYNEIDIPVNQAPPVVSGVRFVRPTLATVILSKQVGKVSRGDASQGLKRKSDHTHVRRDPHSLQDLLCTFLI*
Ga0193751_10322102	3300019888	Soil	VLFLLSAVVCVSAIPQPDLPETAYNEVDTPVNQAPPVVTGVRFVRPTVAPVILPRQVWEARRGITSQALEWKSADTPVRRDPHSFQDLLCTFLI
Ga0179592_101722992	3300020199	Vadose Zone Soil	VRGVFWVFVPLLLGAVFCVSAVPQPDLPETSYNEVDTPVNQAPPLVAGVRFVRPTIATTILPRQVWEATRDVCAQSRERKSARTLVRADVHSSQDLLCTFLI
Ga0179592_102625152	3300020199	Vadose Zone Soil	IGNRFDILWFHGYCYSRGGTVVRRAVWTLVLFLLSTVVCVSAIPQPDLPETSYNEVDTPVNQAPPVVPGVRYVRPAIAPVILPRQVWEAGRGISSQALERKSADTLVRRNPHSLQDLLCTFLI
Ga0179592_103187651	3300020199	Vadose Zone Soil	VLLLISAVICVSAIPQPDLPETSYNEVDTPVNQAPPVVPGVRFVRPAVAPLILPRQVWEARRGVSSQALEWKSADTLVRRDPHSFQDILCTFLI
Ga0210403_101387931	3300020580	Soil	AAIVTFAGGAAVRQGVWTLVLFLLSAVVCVSAIPHTDLPETVYNEVDTPVNQAPPVVPGIRYVRPVIAPLILPRRVWEAGRGVGSQAIEPKSADTLVRRDPQSLQDLLCTFLI
Ga0210403_112315602	3300020580	Soil	VQTAAKLTYSEGATVRGVFWVFVPLLLSAVFCVSAVPQPDLPETSYNEVDTPVNQAPPLVIGVRFVRPTIATTILPRQVWQATRDVCAQSHERKSARTL
Ga0179596_103256202	3300021086	Vadose Zone Soil	VLPRLLLQSRGPVVRRGVWTLVLFLLSAVVCVSAIPQPDLPETSYNEVDTPVNQAAPVVPGVRFVRPAVAPVILPRQVWEARRGVSSQALEWKSADTLVRRDPHSLQDLLCTFLI
Ga0210400_100099814	3300021170	Soil	VRHGFWTFVLLLMSSVVCVSAIPQSDLPGTSYNEIDIPVNQAPPVVSGVRFVRPTLATVILSKQVNKVSRGDASQRLKRKSDHTPVRRDPHSLQDLLCTFLI
Ga0210405_106405381	3300021171	Soil	LVSAVVCVSAIPHTDLPETAYNEVDTPVNQAPPVVPGVRYVRPAIAPLILPRRVWEAGRGISSQAIDPKSADTLVRRDPQSLQDLLCTFLI
Ga0210388_101352863	3300021181	Soil	MFVLLLLGAVVCVSAIPQPDLPETSYNEVDTPVNQAPPVVPGIRFVRPTVAPMILPRQVCEALRGFSAQAHERKSAVTLVRRDPHSLHDLLCTFLI
Ga0210388_118281771	3300021181	Soil	LHATEAPLKRGLWLSILLLLGAVVCASAIPQTDLPETSYNEVDTPINQAPPVVPGVKFVRPSISPVILPRQVCEALRSVGAQVHEVKTASTTVRHTDSLQDILCTFLI
Ga0210387_108895762	3300021405	Soil	ASAIPQPDLPETSYNEVDTPVNQAPPVVQGIRFVRPAVAKVVLPKQACETGRDVTCERLERKSARTPEQRKHNSLQDLLCTFLI
Ga0210383_105918752	3300021407	Soil	MFVLLLMGAVICVSAIPQTDLPETSYNEVDTPVNQAPPVVSGVKFVRPAVAPVILPRQICEALRGVGAQAHERKSAVTPVRPDPHSLQDLLCTFLI
Ga0210383_105946102	3300021407	Soil	VRQGVWTIVLFLLSAVVCVSVIPHTDLPETAYNEVDTPVNQAPPVIPGVKYVRPAIAPLILPRRVWEAGRGVNSQAIEPKSADTLARRDPQSLQDLLCTFLI
Ga0210394_118619421	3300021420	Soil	GVWMFVLLLMGAVICVSAIPQTDLPETSYNEVDTPVNQAPPVVSGVKFVRPAVAPVILPRQICEALRGVGAQAHERKSAVTPVRPDPHSLQDLLCTFLI
Ga0210402_114128981	3300021478	Soil	VRQGVWTLVLFLLSAVVCVSAIPRTDLPETAYNEVDTPVNQAPPVVLGVRYVRPATAPLILPRRVWEVGRGVSSQAIEPKSAATLVRRDPQSLQDL
Ga0242660_11296121	3300022531	Soil	LRSYCYIRGGAAVRQGVWTLVLFLLSAVVCVSAIPRTDLPETAYNEVDTPVNQAPPVVLGVRYVRPATAPLILPRRVWEVGRGVSSQAIEPKSAATLVRRDPQSLQDLLCTFLI
Ga0207646_114354981	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	FLRSYCFIGGGASVGRGLEMVVLLLLGAVTCVSAIPQTDLPETCYNEVNTPVNQAPPVVPGIRFVRPTMATVVLPRQVWEARHGVGVQAPELKESYTLLRRDPHSLQDLLCTFLI
Ga0209881_10502342	3300026273	Soil	VRRGVWTFVLFLLGAVVCVSAIPQTDLPETSYNEVDSPLNQAPPVVRGVRFVRPAIAAVILPRQVCEAGRGINSLALERKAACTPVRRNPHSLQDLLCTFLI
Ga0209839_101993761	3300026294	Soil	MKRGACCFVLLLLSAVFCVSAIPQTDLPETSYNEVDTPVNQAPPVVAGLRFVRPTVIPVAIPKEVREAVRGTSAQGYTEVADRTSVQQTSKPLQDLLCTLLI
Ga0257180_10195421	3300026354	Soil	IGGGASVGRGLEMVVLLLLGAVTCVSAIPQTDLPETCYNEVNTPVNQAPPVVPGIRFVRPTMATVVLPRQVWEARHGVGVQAPELKESYTLLRRDPHSLQDLLCTFLI
Ga0257181_10110703	3300026499	Soil	YFVQEYSFDNTFLRSYCFIRGGASVGRALWMVVLLLLGTVTCVSAIPQTDLPETCYNEVNTPVNQAPPVVPGIRFVRPSLATVVLPRQVWEARHGVGVQAPELKESYTLLRRDPHSPQDLLCTFLI
Ga0257161_10422962	3300026508	Soil	VRQGVWTLVLFLLSAVVCVSAIPHTDLPETAYNEVDTPVNQAPPVVPGVRYVRPAIAPLILPRRVWEAGRAVSSQAIEPKSADTLVRRDPQSLQDLLCTFLI
Ga0257168_10035862	3300026514	Soil	MVVLLLLGTVTCVSAIPQTDLPETCYNEVNTPVNQAPPVVPGIRFVRPSMATVVLPRQVWEARHGVGVQAPELKESYALLRRDPHSLQDLLCTFLI
Ga0257168_11190012	3300026514	Soil	VGRGLWTFVLLFLGAVTCVSAIPQTDLPETSYNEVDTPVNQAPPVVPSVRPGRPTLATVVLPRQVWEARRGVGVQAPELKESYALLRRDPHSLQDLLCTFLI
Ga0209648_106898132	3300026551	Grasslands Soil	VCVSAIRHTDLPETAYNEVDAPVNQAPPVVPGVRYVRPAIAPLILPRRVWEAGRGVNSQAIEPKSADTLVRRDPQSLQDLLCTFLI
Ga0179587_100770983	3300026557	Vadose Zone Soil	VRGVFWVFVPLLLGAVFCVSAVPQPDLPETSYNEVDTPVNQAPPLVAGVRFVRPTIATTILPRQVWEATRDICAQSHERKSARTLVRADVHSSQDLLCTFLI
Ga0179587_105895592	3300026557	Vadose Zone Soil	VRRAFWTSVLLLISAVVCVSAIPQPDLPETSYNEVDTPVNQAPPVVPGVRFVRPAVAPLILPRQVWEARRGVSSQALEWKSADTLVRRDPHSFQDILCTFLI
Ga0208984_11029971	3300027546	Forest Soil	VRRGVWTFVLFLLGAVVCVSAIPQPDLPETSYNEVDTPLNQAPPVVPGVRFARPAIAPVILPRQVWEAERGVSSQAIERKSAHTLVRRDLHSLQDLLCTFLI
Ga0209528_10057985	3300027610	Forest Soil	VRQGVWTLVLFLLSAVVCVSAIPQTDLPETAYNEVDTPVNQAPPVVPGVRYVRPAIAPLILPRRVWEAGRGVSSQAIEPKSADTLVRRDPQSLQDLLCTFLI
Ga0209117_10323903	3300027645	Forest Soil	PNLTPLLLHSRGAAVRQGVWTLVLFLLSAVVCVSAIPQPDLPETAYNEVDTPVNQAPPVVPGVRFVRPAIVPVILPRQVWEAGRGVSSQALEWKSADTLVRRDPHSLQDLLCTFLI
Ga0209736_10004354	3300027660	Forest Soil	VVRRGVWTLVLFLLSAVVCVSAIPQPDLPETSYNEVDTPVNQAPPVVPGVRYVRPAIAPVILPRQVWEAGRGISSQALERKSADTLVRRNPHSLQDLLCTFLI
Ga0209011_10408054	3300027678	Forest Soil	IPHTDLPETAYNEVDTPVNQAPPVVPGVRYVRPAIAPLILPRRVWEAGRGVSSRAIEPKSADTLVRRDPQPLQDLLCTFLI
Ga0209446_11157631	3300027698	Bog Forest Soil	MFVLLLSGAIVCVSAIPQTDLPETSYNEVDTPVNQAPPVVSGIRFVRPTVAPVILPRQVCDVLRSVGAQAHERKSATSVPHRQHSLHDLLCTFLI
Ga0209248_101041151	3300027729	Bog Forest Soil	VRRGVLTFVLLLMGAVVCVFAIPQTDRPETSYNEVDTPVNQAPPVVQGIRFIRPIVAPVILPRHVCEALRGVAAQARAHRADCTPVRRDLHSLQDLLCTLLI
Ga0209038_100944771	3300027737	Bog Forest Soil	AIPQTDLPETSYNEVDTPVNQAPPVVPGVRFVRPAIAPVILSRQVCEALRSVGAQARERKSADTPVLRDPNSLQDLLCTFLI
Ga0208989_101146962	3300027738	Forest Soil	VRRGVWTFVLFLLGAVVCVSAIPQPDLPETSYNEVDTPLNQAPPAVPGVRFVRPAIALVILPRQVCEVNRVVISQGLKRNSAHTAVRRDLHSLQDLLCTFLI
Ga0209908_100212341	3300027745	Thawing Permafrost	MFVLLLLGGVICISAIPQTDLPETSYNEVDTPVNQAPPVVQGIKFVRPTGAPSILPRQVWEAFRGVSAQAHERKSTCTPVRRDPNSRQDVLCTFLI
Ga0209180_103863731	3300027846	Vadose Zone Soil	VGRALWMVVLLLLGTVTCVSAIPQTDLPETCYNEVNTPVNQAPPVVPGIRFVRPSMATVVLPRQVWEARHGVGVQAPELKESYALLRRDPHSLQDLLCTFLI
Ga0209693_105767242	3300027855	Soil	TSYNEVDTPVNQAPPVVPGVRFVRPTFTPVILPREVCEGLRAIGAQFHERKSATPVRRDPHSLQDILCTFLI
Ga0209701_100843131	3300027862	Vadose Zone Soil	LTTRAATAIVTVSGAVVRRGVWTLVLFLLSAVVCVSAIPQPDLPETSYNEVDTPVNQAAPVVPGVRFVRPAVAPVILPRQVWEARRGVSSQALEWKSADTLVRRDPHSLQDLLCTFLI
Ga0209169_102011352	3300027879	Soil	VRRGIWIFVLLLLGAVVCVSAIPQPDLPETSYNEVDTPVNQAPPVVPGVRFVRPTFTPVILPREVCEGLRAIGAQFHERKSATPVRRDPHSLQDILCTFLI
Ga0209488_102139893	3300027903	Vadose Zone Soil	VRHGFWTFVLLLMSAVVCVSAIPQSDLPETSYNEIDIPVNQAPPVVSGVRFVRPTLATVILSKQVGKVSRGDASQGLKRKSDHTHVRRDPHSLQDLLCTFLI
Ga0209006_1000078516	3300027908	Forest Soil	VKRLVWIFVLLLLGAVVCASAIPQPDLPETSYNEVDTPINQAPPVVPGVKLLRPSIAPVILPREVCEALRGFSAQSHERKSADTPVRRSLHSLQDLLCTLLI
Ga0247271_1039472	3300029903	Soil	MRPTLLVFVLILLVSVVCVSAVPPTDLPETSYNEVDTPVNQAPPVVSGIKFVRPTIVPVILPRQFCETLRSVDAQAHERKATKSVRHDPHPLQDLLCTFLI
Ga0265762_11482032	3300030760	Soil	VRRGLWVFVLILLGAVVCVSAVPKTDLPETSYNEVDTPVNLAPPVVSGTRFVRPAISTVILPRQVCDARRGVNAQAHERKSASTPLRYSPPSVQDLLCTLLI
Ga0170822_150472622	3300031122	Forest Soil	AVRRGAWTLVLFLLCAVVCVSAIPQPDLPETSYNEVDTPVNQAPPIVSGIRFVRPTIATVILSRQVCEVKRSVASQRLKRKAAHRMVRRDPRSLQDLLCTLLI
Ga0170824_1077006592	3300031231	Forest Soil	RGAWTLVLFLLSAVVCVFAIPQPDLPETSYNEVDTPVNQAPPIVSGIRFVRPTIATVILSRQVCEVKRSVASQRLKRKAAHRMVRRDPRSLQDLLCTLLI
Ga0170824_1272100752	3300031231	Forest Soil	VRGVFWVFVPLLLGAVFCVSAVPQPDLPETSYNEVDTPVNQAPPLVAGVRFVRPTIAATILPRQVWEATRDVCAQNHERKSARTLVLADVHSLQDRLCTFLI
Ga0302326_104309031	3300031525	Palsa	MFVLLLLGAVICISAIPQTDLPETSYNEVDTPVNQAPPVVQGIKFVRPTGAPSILPRQVWEAFRGVSAQAHERKSTCTPVRRDPNSRQDVLCTFLI
Ga0307474_100897722	3300031718	Hardwood Forest Soil	VVRRGVWTLVLFLLSAVVCVSAIPQTDLPETAYNEVDTPLNQAPPVVPGVRLVRPTISSVILPRQVWEAERGVRSQALEWKSAEKLVRRDPHTLQDLLCTFLI
Ga0307474_102236212	3300031718	Hardwood Forest Soil	VVRGGVWTLVLFLLSAMVCVSAIPQPDLSETVYNEVDTPVNQAPPVVPAVRLVRPAIASVILPRQIWEAGRGVSSQALDRKSADTLVRRDPHSLQDLLCTFLI
Ga0307475_100881662	3300031754	Hardwood Forest Soil	VRQGVWTLVLFLSGAVLCVSAIPQTDLPETAYNEVDTPVNQAPPAVPGLRFVRPSIATAILPRQVWEASRGISSQALEWKSAATLVRRDPHSLQDLLCTFLI
Ga0307475_103269991	3300031754	Hardwood Forest Soil	LFLLSAVVCVSAIPQTDLPETAYNEVDTPLNQAPPVVPGVRLVRPTISSVILPRQVWEAERGVRSQALEWKSAEKLVRRDPHTLQDLLCTFLI
Ga0307475_114576071	3300031754	Hardwood Forest Soil	VVRRGVWTLVLFLLSAVVCVSAIPQTDLPETAYNEVDTPLNQAPPVVPGVRFVRPTISSVILPKQVWEAERGVRSQALDRKSADTLVRRDPHSLQDLLCTFLI
Ga0307473_100578692	3300031820	Hardwood Forest Soil	MVVLLLLGAVTCVSAIPQTDLPETCYNEVNTPVNQAPPVVPGIRFVRPTMATVVLPRQVWEARHGVGVQAPELKESYTLLRRDPHSLQDLLCTFLI
Ga0307479_100867393	3300031962	Hardwood Forest Soil	VVRGGVWTLVLFLLSAMVCVSAIPQPDLPETVYNEVDTPVNQAPPVVPAVRLVRPAIASVILPRQIWEAGRGVSSQALDRKSADTLVRRDPHSLQDLLCTFLI
Ga0307479_110506461	3300031962	Hardwood Forest Soil	SAVVCVSAIPQPDLPETAYNEVDTPVNQTPPVVPGVRFVRPAVTPVILPRQVWEARRGARSQALEWKSAYTLVRRDPHSFQDLLCTFLI
Ga0370483_0011233_807_1109	3300034124	Untreated Peat Soil	MRRGVWCFVLILLGAVFCVSAIPQTDLPETSYNEVDTPVNQAPPVVSGLRIVRPPVMTVTMPKQVYEALRGMTQHHEELTSRTPAPRAKSLQDFLCTLLI
Ga0370484_0116556_407_703	3300034125	Untreated Peat Soil	MRRGLWTFILLLLGTVACVSAIPQTDLPETSYNEVDAPVNQAPPVVPGARLVRPAIAAVILPRQVCEASRGINSPALERRAACTPLRRDPNSLQDLLCT

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089998

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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