Metagenome / Metatranscriptome Family F090015

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090015
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	72 residues
Representative Sequence	MAAQASHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD
Number of Associated Samples	94
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.70 %
% of genes near scaffold ends (potentially truncated)	26.85 %
% of genes from short scaffolds (< 2000 bps)	78.70 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.185 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.222 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.704 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.28% β-sheet: 0.00% Coil/Unstructured: 34.72%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF07883	Cupin_2	41.67
PF13458	Peripla_BP_6	38.89
PF02653	BPD_transp_2	2.78
PF01266	DAO	0.93
PF13561	adh_short_C2	0.93
PF01645	Glu_synthase	0.93
PF01979	Amidohydro_1	0.93
PF04267	SoxD	0.93
PF13522	GATase_6	0.93
PF07969	Amidohydro_3	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.93
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.93
COG4311	Sarcosine oxidase delta subunit	Amino acid transport and metabolism [E]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.19 %
Unclassified	root	N/A	14.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.19 %
Unclassified	root	N/A	14.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.19 %
Unclassified	root	N/A	14.81 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	81.48 %
Unclassified	root	N/A	14.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	81.48 %
Unclassified	root	N/A	14.81 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	41.67 %
Unclassified	root	N/A	14.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.56 %
Rhodobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodobiaceae	3.70 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.93 %
Amorphaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.56 %
Rhodobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodobiaceae	3.70 %
Amorphus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae → Amorphus	0.93 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.56 %
Rhodobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodobiaceae	3.70 %
Amorphus coralli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae → Amorphus → Amorphus coralli	0.93 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17073773	Not Available	1282	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2301648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1906	Open in IMG/M
3300000787\|JGI11643J11755_11128664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300001867\|JGI12627J18819_10003149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	6090	Open in IMG/M
3300001867\|JGI12627J18819_10005107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae → Amorphus → Amorphus coralli	4973	Open in IMG/M
3300002245\|JGIcombinedJ26739_101010837	Not Available	716	Open in IMG/M
3300004479\|Ga0062595_100541637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	888	Open in IMG/M
3300004643\|Ga0062591_102182450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	575	Open in IMG/M
3300005165\|Ga0066869_10011146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1230	Open in IMG/M
3300005167\|Ga0066672_10005278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5674	Open in IMG/M
3300005171\|Ga0066677_10100626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1530	Open in IMG/M
3300005172\|Ga0066683_10061465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodobiaceae	2234	Open in IMG/M
3300005174\|Ga0066680_10120283	All Organisms → cellular organisms → Bacteria	1624	Open in IMG/M
3300005178\|Ga0066688_10113714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1666	Open in IMG/M
3300005181\|Ga0066678_10001778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8638	Open in IMG/M
3300005332\|Ga0066388_102608903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	920	Open in IMG/M
3300005332\|Ga0066388_102927998	Not Available	872	Open in IMG/M
3300005332\|Ga0066388_104859149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	683	Open in IMG/M
3300005332\|Ga0066388_107446381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300005332\|Ga0066388_108199727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300005434\|Ga0070709_10414894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1008	Open in IMG/M
3300005436\|Ga0070713_100028911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4381	Open in IMG/M
3300005445\|Ga0070708_100089923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2794	Open in IMG/M
3300005518\|Ga0070699_100303166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1433	Open in IMG/M
3300005518\|Ga0070699_101320688	Not Available	661	Open in IMG/M
3300005764\|Ga0066903_104214624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	769	Open in IMG/M
3300006046\|Ga0066652_100450160	Not Available	1185	Open in IMG/M
3300006852\|Ga0075433_10099091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2580	Open in IMG/M
3300006914\|Ga0075436_100600210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	811	Open in IMG/M
3300007258\|Ga0099793_10030219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2296	Open in IMG/M
3300009088\|Ga0099830_10419793	Not Available	1084	Open in IMG/M
3300009090\|Ga0099827_11592035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300009162\|Ga0075423_10216991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2006	Open in IMG/M
3300010046\|Ga0126384_10898337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	800	Open in IMG/M
3300010046\|Ga0126384_10978608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	769	Open in IMG/M
3300010358\|Ga0126370_11110620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	729	Open in IMG/M
3300010360\|Ga0126372_10105582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2132	Open in IMG/M
3300010366\|Ga0126379_11385614	Not Available	809	Open in IMG/M
3300010366\|Ga0126379_12685987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	595	Open in IMG/M
3300010398\|Ga0126383_10584973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1186	Open in IMG/M
3300010398\|Ga0126383_11732981	Not Available	713	Open in IMG/M
3300012096\|Ga0137389_10001672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13113	Open in IMG/M
3300012180\|Ga0153974_1023236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1334	Open in IMG/M
3300012202\|Ga0137363_10197318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1613	Open in IMG/M
3300012209\|Ga0137379_10179174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2032	Open in IMG/M
3300012285\|Ga0137370_10680682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	639	Open in IMG/M
3300012351\|Ga0137386_10365061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1039	Open in IMG/M
3300012582\|Ga0137358_10064098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2460	Open in IMG/M
3300012923\|Ga0137359_10422656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1180	Open in IMG/M
3300012923\|Ga0137359_11679837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300012930\|Ga0137407_10256271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1587	Open in IMG/M
3300012948\|Ga0126375_10143890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1492	Open in IMG/M
3300012958\|Ga0164299_10344558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	935	Open in IMG/M
3300012971\|Ga0126369_11440136	Not Available	779	Open in IMG/M
3300015371\|Ga0132258_10083756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodobiaceae	7445	Open in IMG/M
3300015372\|Ga0132256_102677933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300015373\|Ga0132257_102169860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	718	Open in IMG/M
3300016270\|Ga0182036_10240814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1349	Open in IMG/M
3300016319\|Ga0182033_10700738	Not Available	887	Open in IMG/M
3300016445\|Ga0182038_11390886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	628	Open in IMG/M
3300018468\|Ga0066662_10036568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2986	Open in IMG/M
3300021088\|Ga0210404_10249630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	965	Open in IMG/M
3300021403\|Ga0210397_11472256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300021559\|Ga0210409_10544240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1027	Open in IMG/M
3300021560\|Ga0126371_10334666	All Organisms → cellular organisms → Bacteria	1646	Open in IMG/M
3300025910\|Ga0207684_10408402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1167	Open in IMG/M
3300025910\|Ga0207684_10877451	Not Available	755	Open in IMG/M
3300025915\|Ga0207693_10014590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodobiaceae	6314	Open in IMG/M
3300025922\|Ga0207646_10322313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1396	Open in IMG/M
3300025929\|Ga0207664_10465384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1130	Open in IMG/M
3300026277\|Ga0209350_1161882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300026328\|Ga0209802_1054058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodobiaceae	1970	Open in IMG/M
3300026343\|Ga0209159_1202651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300026354\|Ga0257180_1047494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300026551\|Ga0209648_10085032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2629	Open in IMG/M
3300026552\|Ga0209577_10064358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3055	Open in IMG/M
3300027050\|Ga0209325_1001032	All Organisms → cellular organisms → Bacteria	2260	Open in IMG/M
3300027061\|Ga0209729_1025941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	718	Open in IMG/M
3300027071\|Ga0209214_1044450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300027576\|Ga0209003_1001693	All Organisms → cellular organisms → Bacteria	2542	Open in IMG/M
3300027882\|Ga0209590_10420457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	864	Open in IMG/M
3300028047\|Ga0209526_10006447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8042	Open in IMG/M
3300029636\|Ga0222749_10117894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1264	Open in IMG/M
3300031544\|Ga0318534_10705016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300031572\|Ga0318515_10019255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3203	Open in IMG/M
3300031573\|Ga0310915_10456938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	907	Open in IMG/M
3300031573\|Ga0310915_11130184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300031681\|Ga0318572_10747605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300031724\|Ga0318500_10373750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	706	Open in IMG/M
3300031763\|Ga0318537_10116211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	993	Open in IMG/M
3300031771\|Ga0318546_10778128	Not Available	673	Open in IMG/M
3300031771\|Ga0318546_11119325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300031780\|Ga0318508_1066236	Not Available	974	Open in IMG/M
3300031805\|Ga0318497_10636599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300031859\|Ga0318527_10278616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	712	Open in IMG/M
3300031879\|Ga0306919_10182649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1549	Open in IMG/M
3300031879\|Ga0306919_11104306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	604	Open in IMG/M
3300031910\|Ga0306923_11830406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300031912\|Ga0306921_10395480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1613	Open in IMG/M
3300031946\|Ga0310910_11262711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300031954\|Ga0306926_12651696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300032039\|Ga0318559_10085651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1379	Open in IMG/M
3300032042\|Ga0318545_10272685	Not Available	608	Open in IMG/M
3300032064\|Ga0318510_10168110	Not Available	873	Open in IMG/M
3300032065\|Ga0318513_10429962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	645	Open in IMG/M
3300032066\|Ga0318514_10114377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1379	Open in IMG/M
3300032094\|Ga0318540_10217421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	922	Open in IMG/M
3300032180\|Ga0307471_102049752	Not Available	718	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.52%
Host-Associated	Host-Associated	6.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.52%
Plants	Host-Associated → Plants	5.56%
Fungi	Host-Associated → Fungi	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.85%
Mycelium	Host-Associated → Fungi → Mycelium	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.37%
Loam	Environmental → Terrestrial → Soil → Loam	23.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.07%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.22%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027061	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00680520	2088090014	Soil	KGSRKRSVMAAQASHLLTFEELRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD
ICChiseqgaiiDRAFT_23016482	3300000033	Soil	LRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAXRGNNRD*
JGI11643J11755_111286642	3300000787	Soil	MAAQASHLLTFEXLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLALRGNNRD*
JGI12627J18819_100031492	3300001867	Forest Soil	MAAQASHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLVRRGNNRD*
JGI12627J18819_100051076	3300001867	Forest Soil	NGLRIFWARHAVEMCIGSDANLISTIVAKERIGGTHLADFKTKLRHVGLRPGLAPRGNNRD*
JGIcombinedJ26739_1010108372	3300002245	Forest Soil	MAAQASHLLTFNGLRIFWARHAVEMCIGSDANLISTIVEKERIGGTHLADFKTKLRHVGLRPGLAPRGNNRD*
Ga0062595_1005416372	3300004479	Soil	MAAQASHLLTFEGLRIFWARHAVQMGIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLALRGNNRD*
Ga0062591_1021824502	3300004643	Soil	MAAQASHLLTFEELRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLALRGNNRD*
Ga0066869_100111462	3300005165	Soil	MAAQASHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKTMLCHVGLRPGLAPRGNNRD*
Ga0066672_100052785	3300005167	Soil	QASHLLTFEELRIFWARHAVQMGIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD*
Ga0066677_101006261	3300005171	Soil	MAAQASHLLTFEGLRIFWARHAVQMSIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD*
Ga0066683_100614651	3300005172	Soil	KRSVMAAQASHLLTFEGLRIFWARHAVQMGIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD*
Ga0066680_101202831	3300005174	Soil	MAAQASHLLTFEGLRIFWARHAVQMGIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD*
Ga0066688_101137142	3300005178	Soil	MAAQASHLLTFEALRIFWARHAVQMGIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAQRGNNRD*
Ga0066678_100017786	3300005181	Soil	MAAQASHLLTFEGLRIFWARHAVQMGIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAQRGNNRD*
Ga0066388_1026089032	3300005332	Tropical Forest Soil	MAAQGLHIFWARRAVQICIGSNTKLISTIVAEESIGGIHLADFKTVLRHAGDLDPVLRRRDDNRE*
Ga0066388_1029279982	3300005332	Tropical Forest Soil	MAAQAAHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHLGLRPGLAPRGNNRD*
Ga0066388_1048591492	3300005332	Tropical Forest Soil	MNAGIQHDLLLFKGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKTTLCHVGPRPGLAPRGKNRD*
Ga0066388_1074463812	3300005332	Tropical Forest Soil	MAAQASHLLTLEGLRIFWARHAVQMCIESDANLISTIVAKERIGGTHLADFKIMLRHV
Ga0066388_1081997271	3300005332	Tropical Forest Soil	MAAQASHLLALDGLRISWARRAVQICIGPDANLISTIVAKKSIGGMHLADFTTVFRHAG
Ga0070709_104148942	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAAQASHLLTFEELRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD*
Ga0070713_1000289112	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAAQASHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLALRGNNRD*
Ga0070708_1000899234	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAAQASHLLTFQELRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLALRGNNRD*
Ga0070699_1003031663	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAAQASHLLTFEGLRIFWARHAVQMGIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRP
Ga0070699_1013206881	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	QASHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIDGTHFADFKIMLRHVGLRPGLAPSGNIRDWCERAFRPTPVQKERSKCGKGAQCCAI*
Ga0066903_1042146242	3300005764	Tropical Forest Soil	MAAQACHLLAFDHAEGMRIFWARRAVQMCIGLDARLISTIVAEERIGAHLADSTAVIRCATGLDPVLRQRDHNRN*
Ga0066652_1004501601	3300006046	Soil	VMAAQASHLLTFEGLRIFWARHAVQMGIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD*
Ga0075433_100990913	3300006852	Populus Rhizosphere	MAAQASRLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD*
Ga0075436_1006002102	3300006914	Populus Rhizosphere	MAAQASRLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPSGNNRD*
Ga0099793_100302194	3300007258	Vadose Zone Soil	MAAQASHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLA
Ga0099830_104197931	3300009088	Vadose Zone Soil	MAAQASHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGMHLADFKTMLRHVGLRPGLAPRGNNRD*
Ga0099827_115920352	3300009090	Vadose Zone Soil	LLALDRAHGLRIFWAGRAVQMCIGPDAKLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD*
Ga0075423_102169913	3300009162	Populus Rhizosphere	MMAAQASHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLALRGNNRD*
Ga0126384_108983372	3300010046	Tropical Forest Soil	MAAQASHLVALDGLRIFWARRAVQMCIGSDAKLISTIVAEESIGGIHLADFTTVFRHAGDLDPVLRRRDSNRD*
Ga0126384_109786082	3300010046	Tropical Forest Soil	MAAQAAHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKTTLCHVGPRPGLAPRGKNRD*
Ga0126370_111106202	3300010358	Tropical Forest Soil	MAAQASHLLALDGLRIFWARRAVQMCIGSDAKLISTIVAGESIGGIHLADFTTVLRHAGDLDPVLRRRDSNRD*
Ga0126372_101055823	3300010360	Tropical Forest Soil	MAAQACHLLALDRLRIFWARRAAQMCSGSDAKLISTIAAEESIGGIHLADFTTLLRHAGHLDPVLRRRDSNCD*
Ga0126379_113856141	3300010366	Tropical Forest Soil	MAAQASPLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHLGLRPGLAPRGNNRD*
Ga0126379_126859872	3300010366	Tropical Forest Soil	MAAQASHLVALDGLRIFWARRAVQMCIGSDAKLISTIVAGESIGGIHLADFTTVLRHAGDLDPVLRRRDDNRE*
Ga0126383_105849732	3300010398	Tropical Forest Soil	MAAQACHLLAFDHAEGMRIFWARRAVQMCIGLDARLISTIVAEERIGGTHLADSTAVIRCATGLDPVLRQRDHNRN*
Ga0126383_117329812	3300010398	Tropical Forest Soil	MAAQASHLVALDGLRIFWARRAVQMCIGSDAKLISTIVAGESIGGIHLADFTTVLRHAGDLDPVLRRRDSNRD*
Ga0137389_100016723	3300012096	Vadose Zone Soil	MAAQASHLLTLKGLRIFWARHAVQMCIGSDANLISTIVAKERIGGMHLADFKTMLRHVGLRPGLAPRGNNRD*
Ga0153974_10232362	3300012180	Attine Ant Fungus Gardens	MAAQASHLLTLKGLRIFWARHAVQMCIGSDANLISTIVEKERIGGTHLADFKTKLRHVGLRPGLAPRGNIRD*
Ga0137363_101973183	3300012202	Vadose Zone Soil	MTIREDSRKQSATAAQACHLPALDRAHGLRIFWAGRAVQMCIGPDAKLISTIVAEERIGGTHLADFTAVLRHATDLDPVLRRR*
Ga0137379_101791742	3300012209	Vadose Zone Soil	MAAQASHLLTFEGLRIFWARHAVQMGIGSDANLISTIVAKERIGGTHRADFKIMLRHVGLRPGLAQRGNNRD*
Ga0137370_106806821	3300012285	Vadose Zone Soil	MAAQASHLLALEGLRIFWARRAVQICIGSDANLISTIVAEESIGGIHLADFTTVFRHARDLGPVLRRRDSNRDSHERACFGPRLYRRRDQNVEK
Ga0137386_103650612	3300012351	Vadose Zone Soil	MAAQASHLLTFEGLRIFWARHAVQMGIGSDANLISTIVAKERIGGTHRADFKIMLRHVGLRPGLAPRGNNRD*
Ga0137358_100640982	3300012582	Vadose Zone Soil	MAAQASHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAQRGNNRD*
Ga0137359_104226562	3300012923	Vadose Zone Soil	LLALDRAHGLRIFWAGRAVQMCIGPDAKLISTIVAEERIGGTHLADFTAVLRHATDLDPVLRRR*
Ga0137359_116798372	3300012923	Vadose Zone Soil	MAAQASHLLTFEGLRIFWARHAVQMGIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLALRGNNCD*
Ga0137407_102562712	3300012930	Vadose Zone Soil	MAAQASHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD*
Ga0126375_101438902	3300012948	Tropical Forest Soil	MAAQACHLLAFDHAEGMRIFWARRAVQMCIGLDARLISTIVAEERIGGTHLADSTAVIRCATGLDLVLRQRDHNRN*
Ga0164299_103445582	3300012958	Soil	MAAQASHLLTFEGLRIFWARHAVEMCIGSDANLISTIVAKERIGGTHLADFRTMLCHVGLRPGLA
Ga0126369_114401361	3300012971	Tropical Forest Soil	DLLLFKGLRIFWARHAVQMCIGSDANLISTIVAKERIGDTHLADFKTTLCHVGPRPGLAPRGKNRD*
Ga0132258_100837563	3300015371	Arabidopsis Rhizosphere	MAAQASHLLTFEELRIFWARHAVQMCIGSDANLISTIVAKERIGTHLADFKIMLRHVGLRPGLVRRGNNRD*
Ga0132256_1026779331	3300015372	Arabidopsis Rhizosphere	MTAQASHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIVLRHVGLRPGLAPRGNNRD*
Ga0132257_1021698602	3300015373	Arabidopsis Rhizosphere	MAAQASHLLTFDGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHAGLRPGLAPSGNIRD*
Ga0182036_102408142	3300016270	Soil	MAAHADHLLALDAQGSRIFWARRAVQMCIGSNTKLISTIVAEESIGGIHLADFTTVLRHAGDLDPVLRRRDDNRE
Ga0182033_107007382	3300016319	Soil	REDCRKRSVMAAQAPHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFRTMLRYVGLRPGLAPRGNNRD
Ga0182038_113908862	3300016445	Soil	MAAQASRLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFRTMLRYVGLRPGLAPRGNNRD
Ga0066662_100365684	3300018468	Grasslands Soil	MAAQASHLLTFEGLRIFWARHAVQMGIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAQRGNNRD
Ga0210404_102496302	3300021088	Soil	MAAQASHLLTFNGLRIFWARHAVEMCIGSDANLISTIVEKERIGGTHLADFKTKLRHVGLRPGLAPRGNNRD
Ga0210397_114722562	3300021403	Soil	MAAQASHLLTFNGLRIFWARHAVEMCIGSDANLISTIVEKERIGGTHLADFKTKLRHAGLRPGLAPRGNNRD
Ga0210409_105442402	3300021559	Soil	MAAQASHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFETMLRHVGLRPGLAPRGNNRDWCDRAFRPTPV
Ga0126371_103346662	3300021560	Tropical Forest Soil	MAAQASHLVALDGLRIFWARRAVQMCIGSDAKLISTIVAGESIGGIHLADFTTVLRHAGDLDPVLRRRDSNRD
Ga0207684_104084021	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAAQASHLLTFEGLRIFWARHAVQMGIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD
Ga0207684_108774511	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAAQASHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLALRGNNRD
Ga0207693_100145901	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MAAQASHLLTFEELRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD
Ga0207646_103223131	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAAQASHLLTFEELRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPSGNIRDWCERAFRPTPVQKERSK
Ga0207664_104653842	3300025929	Agricultural Soil	MAAQASHLLTFEGLRIFWARHAVQMGIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLALRGNNRD
Ga0209350_11618821	3300026277	Grasslands Soil	MAAQASHLLTFEGLRIFWARHAVQMSIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD
Ga0209802_10540583	3300026328	Soil	QASHLLTFEGLRIFWARHAVQMGIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD
Ga0209159_12026512	3300026343	Soil	MAAQASHLLTFEALRIFWARHAVQMGIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD
Ga0257180_10474942	3300026354	Soil	MAAQASHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGMHLADFKTMLRHVGLRPGLAPRGNNRD
Ga0209648_100850324	3300026551	Grasslands Soil	MTIREDSRNQSATAAQACHLLALDRAHGLRIFWAGRAVQMCIGPDAKLISTIVAEERIGGTHLADFTAVLRHATDLDPVLRRR
Ga0209577_100643583	3300026552	Soil	MAAQASHLLTFEALRIFWARHAVQMGIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAQRGNNRD
Ga0209325_10010322	3300027050	Forest Soil	VTAAQASRLLTFNGLRIFWARHAVEMCIGSDANLISTIVAKERIGGTHLADFKTKLRHVGLRPGLAPRGNNRD
Ga0209729_10259412	3300027061	Forest Soil	MAAQASHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIDGTHLADFKIMLRHVGLRPGLAQRGNIRD
Ga0209214_10444502	3300027071	Forest Soil	MAAQASHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD
Ga0209003_10016931	3300027576	Forest Soil	QKRSVMAAQASHLLTFNGLRIFWARHAVEMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLVRRGNNRD
Ga0209590_104204572	3300027882	Vadose Zone Soil	MAAQASHLLTLKGLRIFWARHAVQMCIGPDAKLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD
Ga0209526_100064472	3300028047	Forest Soil	MTAQASHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIDGTHLADFKIMLRHVGLRPGLAPRGNNRD
Ga0222749_101178942	3300029636	Soil	MAAQASHLLTFNGLRIFWARHAVEMCIGSDANLISTIVAKERIGGTHLADFKTKLRHVGLRPGLAPRGNNRD
Ga0318534_107050162	3300031544	Soil	MAAQAPHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFRTMLRYVGLRPGLAPRGNNRD
Ga0318515_100192555	3300031572	Soil	MAAQAPHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFRTMLRYVG
Ga0310915_104569381	3300031573	Soil	MAAQASRLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLVRWGNNRD
Ga0310915_111301842	3300031573	Soil	TRSSNTIREDCRKRSVMAAQAPHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFRTMLRYVGLRPGLAPRGNNRD
Ga0318572_107476052	3300031681	Soil	MAAHADHLLALDAQRLHIFWARRAVQMCIGSNTKLISTIVAEESIGGIHLADFTTVLRHAGDLDPVLRRRDDNRE
Ga0318500_103737502	3300031724	Soil	MAAQASHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFRTMLRYVGLRPGLAPRGNNRD
Ga0318537_101162112	3300031763	Soil	MAAQASHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLVRWGNNRD
Ga0318546_107781281	3300031771	Soil	RIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLVRWGNNRD
Ga0318546_111193251	3300031771	Soil	MAAQGLHIFWARRAVQIFIGSNTKLISTIVAEESIGGIHLANFTTVLRHAGDLDPVLRRRDDNR
Ga0318508_10662361	3300031780	Soil	PHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFRTMLRYVGLRPGLAPRGNNRD
Ga0318497_106365992	3300031805	Soil	MAAQAPHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFRTMLRYVGL
Ga0318527_102786162	3300031859	Soil	MIECRLSSNTIREDCRKRSVMAAQASHLLTFEGLRIFWARHAVQMCIGSDANLNSTMVAKERIGGTHLADFKIMLRHVGLRPGLARRGNNRD
Ga0306919_101826492	3300031879	Soil	VTAAQASHLLAFEGLRIFWARHAVQMCIGSDANLISTMVAKERIGGTHLADFKIMLRHVGLRPGLVRWGNNRD
Ga0306919_111043062	3300031879	Soil	MAAHADHLLALDAQGSRIFWARRAVQMCIGSNTKLISTIVAEESIGGIHLADFTTVLRHAGDLDPVLRRRGDNRE
Ga0306923_118304061	3300031910	Soil	MAAQASRLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVG
Ga0306921_103954803	3300031912	Soil	MAAQGLHIFWARRAVQIFIGSNTKLISTIVAEESIGGIHLANFTTVLRHAGDLDPVLRRRDDNRE
Ga0310910_112627112	3300031946	Soil	SVMAAQASRLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLVRWGNNRD
Ga0306926_126516962	3300031954	Soil	VTAAQASHLLAFEGLRIFWARHAVQMCIGSDANLISTMVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD
Ga0318559_100856512	3300032039	Soil	MAAHADHLLALDAQGSRIFWARRAVQMCIGSNTKLISTIVAEESIGGIHLADFTTLLRHAGDLDPVLRRRGDNRE
Ga0318545_102726852	3300032042	Soil	SRLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD
Ga0318510_101681101	3300032064	Soil	LSSNTIREGSRKRSVMAAQASRLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLVRWGNNRD
Ga0318513_104299622	3300032065	Soil	MAAQGLHIFWARRAVQIFIGSNTKLISTIVAEESIGGIHLADFTTLLRHAGDLDPVLRRRDSNRD
Ga0318514_101143772	3300032066	Soil	MAAQAPHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKTKLRHVGLRPGLAPRGNNRD
Ga0318540_102174212	3300032094	Soil	MAAHADHLLALDAQGLHIFWARRAVQMCIRSNTKLISTIVAEESIGGIHLADFTTVLRHAGDLDPVLRRRDDNRE
Ga0307471_1020497522	3300032180	Hardwood Forest Soil	AQASHLLTFEGLRIFWARHAVQMCIGSDANLISTIVAKERIGGTHLADFKIMLRHVGLRPGLAPRGNNRD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090015

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences