Metagenome / Metatranscriptome Family F090053

Basic Information
Family ID	F090053
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	40 residues
Representative Sequence	MMVEAHISKSKYRHVIASIKLLTAAAPLGFAYVAALGIAT
Number of Associated Samples	88
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.70 %
% of genes near scaffold ends (potentially truncated)	22.22 %
% of genes from short scaffolds (< 2000 bps)	89.81 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Bacteria (96.296 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.704 % of family members)
Environment Ontology (ENVO)	Unclassified (34.259 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (47.222 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF13193	AMP-binding_C	45.37
PF00378	ECH_1	45.37
PF16113	ECH_2	3.70
PF01476	LysM	0.93
PF02979	NHase_alpha	0.93
PF06267	DUF1028	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG3342	Uncharacterized conserved protein, Ntn-hydrolase superfamily	General function prediction only [R]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.22 %
Unclassified	root	N/A	2.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.22 %
Unclassified	root	N/A	2.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.30 %
Unclassified	root	N/A	2.78 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.93 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	25.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.93 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.93 %

Name	Rank	Taxonomy	Distribution
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	21.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.93 %

Name	Rank	Taxonomy	Distribution
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	21.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Micromonosporaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae	21.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Micromonosporaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	21.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Micromonosporaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	21.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Micromonosporaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	21.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Micromonosporaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	21.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %
Tylenchina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Micromonosporaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	21.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %
Panagrolaimomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Micromonosporaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	21.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %
Strongyloidoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Micromonosporaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	21.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %
Strongyloididae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Micromonosporaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	21.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %
Parastrongyloides	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Micromonosporaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	21.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
Unclassified	root	N/A	2.78 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004629\|Ga0008092_11299573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	542	Open in IMG/M
3300005179\|Ga0066684_10534133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	787	Open in IMG/M
3300005439\|Ga0070711_101447946	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300005471\|Ga0070698_100875596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	843	Open in IMG/M
3300005566\|Ga0066693_10118481	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300005764\|Ga0066903_101848717	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300005983\|Ga0081540_1045307	All Organisms → cellular organisms → Bacteria	2236	Open in IMG/M
3300006806\|Ga0079220_11089055	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300009093\|Ga0105240_11593481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	683	Open in IMG/M
3300009792\|Ga0126374_10174932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	1330	Open in IMG/M
3300010043\|Ga0126380_10542468	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300010043\|Ga0126380_11739953	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300010046\|Ga0126384_10105226	All Organisms → cellular organisms → Bacteria	2091	Open in IMG/M
3300010048\|Ga0126373_12670338	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300010320\|Ga0134109_10497206	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300010361\|Ga0126378_12384819	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300010362\|Ga0126377_10251547	All Organisms → cellular organisms → Bacteria → Proteobacteria	1720	Open in IMG/M
3300010366\|Ga0126379_10234436	All Organisms → cellular organisms → Bacteria → Proteobacteria	1794	Open in IMG/M
3300010366\|Ga0126379_11299788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	834	Open in IMG/M
3300010398\|Ga0126383_10177330	All Organisms → cellular organisms → Bacteria → Proteobacteria	2021	Open in IMG/M
3300012198\|Ga0137364_10416266	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300012481\|Ga0157320_1005928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	830	Open in IMG/M
3300012960\|Ga0164301_10631280	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300012971\|Ga0126369_11832877	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300012987\|Ga0164307_10285745	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	1169	Open in IMG/M
3300014325\|Ga0163163_10325263	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300014497\|Ga0182008_10499560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	669	Open in IMG/M
3300015265\|Ga0182005_1195206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	606	Open in IMG/M
3300015372\|Ga0132256_101827470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	715	Open in IMG/M
3300015374\|Ga0132255_100428691	All Organisms → cellular organisms → Bacteria	1931	Open in IMG/M
3300016319\|Ga0182033_10843608	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300016371\|Ga0182034_11587186	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300016404\|Ga0182037_10532546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	989	Open in IMG/M
3300016422\|Ga0182039_11997832	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300017944\|Ga0187786_10424280	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300017959\|Ga0187779_10037584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	2801	Open in IMG/M
3300018058\|Ga0187766_10046444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	2543	Open in IMG/M
3300018060\|Ga0187765_10266640	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300018064\|Ga0187773_10385106	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300018433\|Ga0066667_10391007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	1120	Open in IMG/M
3300018482\|Ga0066669_10358932	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300020581\|Ga0210399_10561361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	946	Open in IMG/M
3300020582\|Ga0210395_10850912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	679	Open in IMG/M
3300021374\|Ga0213881_10086256	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300021445\|Ga0182009_10021342	All Organisms → cellular organisms → Bacteria	2459	Open in IMG/M
3300021560\|Ga0126371_11874558	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300021560\|Ga0126371_13052611	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300025916\|Ga0207663_11636389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	518	Open in IMG/M
3300026116\|Ga0207674_10470869	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300027750\|Ga0209461_10085387	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300027765\|Ga0209073_10189267	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300028884\|Ga0307308_10214803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	922	Open in IMG/M
3300031543\|Ga0318516_10339357	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300031543\|Ga0318516_10603737	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300031544\|Ga0318534_10428685	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300031546\|Ga0318538_10385938	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300031572\|Ga0318515_10345829	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300031572\|Ga0318515_10360306	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300031573\|Ga0310915_10080168	All Organisms → cellular organisms → Bacteria	2169	Open in IMG/M
3300031640\|Ga0318555_10243069	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300031640\|Ga0318555_10251808	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300031680\|Ga0318574_10922847	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300031681\|Ga0318572_10967631	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300031718\|Ga0307474_11592989	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300031719\|Ga0306917_10463720	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300031719\|Ga0306917_11526861	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300031723\|Ga0318493_10473678	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300031723\|Ga0318493_10630721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	598	Open in IMG/M
3300031723\|Ga0318493_10750755	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300031744\|Ga0306918_10450430	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300031747\|Ga0318502_10527761	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300031764\|Ga0318535_10118435	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300031765\|Ga0318554_10527300	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300031796\|Ga0318576_10286029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	778	Open in IMG/M
3300031832\|Ga0318499_10115569	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300031845\|Ga0318511_10458767	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300031846\|Ga0318512_10347491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	741	Open in IMG/M
3300031939\|Ga0308174_10135548	All Organisms → cellular organisms → Bacteria	1815	Open in IMG/M
3300031946\|Ga0310910_11234124	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300031946\|Ga0310910_11434458	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300031981\|Ga0318531_10320325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	701	Open in IMG/M
3300032054\|Ga0318570_10091493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	1320	Open in IMG/M
3300032054\|Ga0318570_10167971	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300032060\|Ga0318505_10432295	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300032060\|Ga0318505_10561224	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300032067\|Ga0318524_10202624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	1014	Open in IMG/M
3300032076\|Ga0306924_11019605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	907	Open in IMG/M
3300032770\|Ga0335085_10036995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6733	Open in IMG/M
3300032770\|Ga0335085_10038393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6593	Open in IMG/M
3300032770\|Ga0335085_12556537	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300032782\|Ga0335082_10406064	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300032783\|Ga0335079_10556615	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300032783\|Ga0335079_11937152	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300032805\|Ga0335078_10008896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14921	Open in IMG/M
3300032805\|Ga0335078_11189950	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300032805\|Ga0335078_12281127	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300032829\|Ga0335070_10360574	Not Available	1397	Open in IMG/M
3300032893\|Ga0335069_10401380	All Organisms → cellular organisms → Bacteria	1608	Open in IMG/M
3300032893\|Ga0335069_10597574	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300032893\|Ga0335069_10941873	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300032897\|Ga0335071_10455767	Not Available	1231	Open in IMG/M
3300032898\|Ga0335072_10710164	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300032954\|Ga0335083_10317954	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300032955\|Ga0335076_10296035	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300033004\|Ga0335084_10545724	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300033134\|Ga0335073_10806415	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300033158\|Ga0335077_10896895	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.74%
Host-Associated	Host-Associated	9.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.74%
Plants	Host-Associated → Plants	9.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.70%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.93%
Roots	Host-Associated → Plants → Roots	0.93%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	23.15%
Loam	Environmental → Terrestrial → Soil → Loam	3.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.78%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.04%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	23.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.93%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	18.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.41%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.93%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012481	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.1.yng.040610	Host-Associated	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090053

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0008092_112995732	3300004629	Tropical Rainforest Soil	MVEAHSSKSEYRHLIASIKLLTAAAPLGFAYVAALGIAT*
Ga0066684_105341332	3300005179	Soil	MMVEAHISKPRYRHVIASIKLLTAAAPLGFAHVAALGIAT*
Ga0070711_1014479462	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MVEARIFKSKYRHIIASVKLLTAAAPLGLAYVAALGIVT*
Ga0070698_1008755961	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GMMVEAHISKSKYRHVIASIKLLTAAAPLGSAYVAALGIAT*
Ga0066693_101184812	3300005566	Soil	MMAEAHISRSKYRHVIASIKLLTAAAPLGFAHVAALGIAT*
Ga0066903_1018487172	3300005764	Tropical Forest Soil	MMVEAHISKSKYRHLIASIKLLTAAAPLGFAYVAARGIAA*
Ga0081540_10453073	3300005983	Tabebuia Heterophylla Rhizosphere	MMAEAHISKPRYRHVIAPVKLLTAAAPPGFAYVAARGTTT*
Ga0079220_110890551	3300006806	Agricultural Soil	MVEAHISKSKYRHVIASIKLLTAAAPLGFAYVAALGIAT*
Ga0105240_115934811	3300009093	Corn Rhizosphere	EAHISKSKYRYVIASIKLLTAAAPLGFAYVAALGITT*
Ga0126374_101749322	3300009792	Tropical Forest Soil	MVEAHISKSRYRHVIASIKLLTAAAPLGFAYVAALGIAT*
Ga0126380_105424682	3300010043	Tropical Forest Soil	MAGARISRSGYRHVIASIKLLTAAAPPGFAYVAALGIAT*
Ga0126380_117399531	3300010043	Tropical Forest Soil	NQVLTGMMVQARISTSGYRHVIASVKLLTAAAPPGFAYAAALGIAT*
Ga0126384_101052262	3300010046	Tropical Forest Soil	MVEAHISKSKYRHVIASIKLLTAAAPLGSAYVAALGIAT*
Ga0126373_126703382	3300010048	Tropical Forest Soil	MMVEAHISKFKYRHVIASIKLLTAAAPLGFAYVAALGIAT*
Ga0134109_104972062	3300010320	Grasslands Soil	MMVEAHISKSRYRHVIASIKLLTAAAPLGFAHVAALGIAT*
Ga0126378_123848192	3300010361	Tropical Forest Soil	MMVEAHISKSRYRHVIASIKLLTAAAPLGFAYVAALGIAT*
Ga0126377_102515472	3300010362	Tropical Forest Soil	MMAGAHISKSGYRHVIASVKLLTAAAPLGFAYVAALGIAT*
Ga0126379_102344362	3300010366	Tropical Forest Soil	MVEAHISKSKYRHVIASIKLLTAATLGSASVAAPGIAT*
Ga0126379_112997881	3300010366	Tropical Forest Soil	MAEAHISKSRYRHVIASIKLLTAAAPLGFAYVAARGTAT*
Ga0126383_101773302	3300010398	Tropical Forest Soil	MMVEAHISKSKYRHVIASIKLLTAAAPLGFAYVAARGIAT*
Ga0137364_104162662	3300012198	Vadose Zone Soil	MVEAHISKSRYRHVIASIKLLTAAAPLGFAYVAALGIVT*
Ga0157320_10059281	3300012481	Arabidopsis Rhizosphere	MVEARVSKSKYRHVIASIKLLTAAAPPGSGYVAAHGIAR*
Ga0164301_106312802	3300012960	Soil	MVEAHISKSKYRHVISSIKLLTAAAPLGFAYVAALGITT*
Ga0126369_110203401	3300012971	Tropical Forest Soil	PRNQVLIGMMVEAHIAKPRYRHVIASIKLLTAAAPLGFAYVAALGIAT*
Ga0126369_118328772	3300012971	Tropical Forest Soil	MMIEAHISKSKYRHVIASIKLLTAAAPLGSASVAAPG
Ga0164307_102857452	3300012987	Soil	MVEAHISKSKYRHVISSIKLLTAAAPLGFAYVAALGIAT*
Ga0163163_103252632	3300014325	Switchgrass Rhizosphere	MVEAHISKSRYRHVIASIKLLTAAAPLGFAYVAALGIAI*
Ga0182008_104995601	3300014497	Rhizosphere	RNQVLIGMMVEAHIYKSRYRHVIASIKLLTAAAPLGFAYVAARGMAT*
Ga0182005_11952062	3300015265	Rhizosphere	VEAHISKSRYRHVIASIKLLTAAAPLGFAYVAALGIVT*
Ga0132256_1018274702	3300015372	Arabidopsis Rhizosphere	MIGMMVEAHISKSTYRHVIASSRLLTAAAPPGSGYVAAHGIAR*
Ga0132255_1004286913	3300015374	Arabidopsis Rhizosphere	MIGMMVDAHISKSTYRHVIASSRLLTAAAPPGSGYVAAHGIAR*
Ga0182033_108436082	3300016319	Soil	MVEAHISKSKYRHVIASIKLLTAAAPLGFAYMAALGIAT
Ga0182034_115871862	3300016371	Soil	MMVEVRISKSRYRHVIASIKLLTAAAPLGFAYVAAVGIVT
Ga0182037_105325462	3300016404	Soil	IVEAHISKSRYRHVIASIKLLAAAAPLGFAYVAARGIAT
Ga0182039_119978322	3300016422	Soil	VQAHISKSRYRHIIASIKLLTAAAPLGFARVAARGIAT
Ga0187786_104242802	3300017944	Tropical Peatland	MMAGAHISKPRYRHVIASIKLLTAAAPLGFAYVAARGIAA
Ga0187779_100375843	3300017959	Tropical Peatland	MMVEAHISKPKYRHVIASIKLLTAAAPLGFAYMAARGIAT
Ga0187766_100464443	3300018058	Tropical Peatland	MAGAHISKPRYRHVIASIKLLTAAAPLGFAYVAALGIAR
Ga0187765_102666402	3300018060	Tropical Peatland	MMVAAHISKSRYRHVIASITLLTAAAPLGFAYVAAHGIAT
Ga0187773_103851062	3300018064	Tropical Peatland	MMVEAHISKSKYRHLIASVKLLTAAAPLGFAYVADLGIAT
Ga0066667_103910071	3300018433	Grasslands Soil	LIGMMVEAHISKSKYRHVIASIKLLTAAAPLGSAYVAALGIAT
Ga0066669_103589322	3300018482	Grasslands Soil	MMVEAHISKPRYRHVIASIKLLTAAAPLGSAYVAALGIAT
Ga0210399_105613611	3300020581	Soil	QVLIGMMVEAHISKSKYRHVIASIKLLTAVAPLGSAYVAALGIAT
Ga0210395_108509121	3300020582	Soil	QLLIGMMVEAHISKSKYRHVIASIKLLTAAAPLGSAYVAALGTAT
Ga0213881_100862562	3300021374	Exposed Rock	MMVEAHISKSKYRHVIASIKLLTAAAPLGFAYVAALGIAT
Ga0182009_100213422	3300021445	Soil	MMVEAHISKSRYRHVIASIKLLTAAAPLGFAYAAARGIAT
Ga0126371_118745582	3300021560	Tropical Forest Soil	MMVEAHISKFKYRHVIASIKLLTAAAPLGFAYVAALGIAT
Ga0126371_130526112	3300021560	Tropical Forest Soil	MMVEAHISKPRYRHVIASIKLLRAAAPPGFAYVAVLGIAT
Ga0207663_116363892	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MMVEARIFKSKYRHIIASVKLLTAAAPLGLAYVAALGIVT
Ga0207674_104708692	3300026116	Corn Rhizosphere	MMVEAHISKSKYRHVIASIKLLTAAAPLGFAYVAAFGIAI
Ga0209461_100853872	3300027750	Agave	MMVEAHIAKSKYRHVIASIKLLTAAAPLGFAYAAARGIAT
Ga0209073_101892672	3300027765	Agricultural Soil	MVEAHISKSKYRHVIASIKLLTAAAPLGFAYVAALGIAT
Ga0307308_102148032	3300028884	Soil	VKAHISKSRYRHVIASIKLLTAAAPLGFAYVAALGIAT
Ga0318516_103393572	3300031543	Soil	MVEAHISKSKYRHVIASIKLLTAAAPLGFAYVTAFGIAT
Ga0318516_106037372	3300031543	Soil	MVQAHISKSRYRHIIASIKLLTAAAPLGFACVAARGIAT
Ga0318534_104286852	3300031544	Soil	MVEVHISKSKYRHVIASIKLLPAAAPLGFAYVAALGIAT
Ga0318538_103859382	3300031546	Soil	MMAEAHICRSRYRHVIASIKLLTAAAPLGFAYVAAVGIVT
Ga0318515_103458292	3300031572	Soil	MMVQAHISKSRYRHIIASIKLLTAAAPLGFACVAARGIAT
Ga0318515_103603062	3300031572	Soil	MMAEAHICKSKFRHVIASIKLLTAAAPLGFAYAAVGIAT
Ga0310915_100801683	3300031573	Soil	MMVEAHISKSKYRHVIASIKLLPAAAPLGFAYVAALGIAT
Ga0318555_102430692	3300031640	Soil	MMVEVHISKSKYRHVIASIKLLPAAAPLGFAYVAALGIAT
Ga0318555_102518082	3300031640	Soil	MAEAHICRSRYRHVIASIKLLTAAAPLGFAYVAAVGIVT
Ga0318574_109228472	3300031680	Soil	HICRSRYRHVIASIKLLTAAAPLGFAYVAAVGIVT
Ga0318572_109676312	3300031681	Soil	MMAGAHISRPRYRHLIASIKLLRAAAPLGFADVAARGIAT
Ga0307474_115929891	3300031718	Hardwood Forest Soil	MMVEPHISKSKYRHVIASITLLTAAAPLGSAHVAAPGIAT
Ga0306917_104637202	3300031719	Soil	MAEAHICRSRYRHVIASIKLLRAAAPLGFADVAARGIAT
Ga0306917_115268611	3300031719	Soil	DRKMVEAHISKSKYRHVIASIKLLTAAAPLGFAYVTAFGIAT
Ga0318493_104736782	3300031723	Soil	MMVEAHISKSKYRHVIASIKLLTAAAPLGFAYVAALRIAT
Ga0318493_106307212	3300031723	Soil	AHICRSRYRHVIASIKLLTAAAPLGFAYVAAVGIVT
Ga0318493_107507552	3300031723	Soil	MMIKAHISRSTYRHVIASITLLTAAAPLGSASVAALGIAT
Ga0306918_104504302	3300031744	Soil	MMAEAHICRSRYRHVIASIKLLTAAAPLGFAYAAVGIAT
Ga0318502_105277612	3300031747	Soil	MMVEVRISKSRYRHVIASIKLLTAAAPLGFAYVAARGIAI
Ga0318535_101184352	3300031764	Soil	MMVEAHISKSKYRHVIASIKLLTAAAPLGFAYVTAFGIAT
Ga0318554_105273001	3300031765	Soil	MAGAHISRPRYRHLIASIKLLRAAAPLGFADVAARGIAT
Ga0318576_102860291	3300031796	Soil	IGMMVQAHISKSRYRHIIASIKLLTAAAPLGFACVAARGIAT
Ga0318499_101155692	3300031832	Soil	MMVEAHISKSKYRHVIASIRRLTAAAPLGFAYVAARGIAT
Ga0318511_104587672	3300031845	Soil	MMAEAHICRSRYRHVIASIKLLTAAAPLGFAYVAAVG
Ga0318512_103474911	3300031846	Soil	KMVEAHISKSKYRHVIASIKLLTAAAPLGFAYVTAFGIAT
Ga0308174_101355482	3300031939	Soil	MMAEAHISKSRYRHVIASIKLLTAAAPLGFAYVAARGIAT
Ga0310910_112341242	3300031946	Soil	MMVEARISKSKYRHVIASIKLLTAAAPLGFAYMAALGIAT
Ga0310910_114344582	3300031946	Soil	MVEAHISKSKYRHVIASIKLLTAAAPHGFAYVAALGMAT
Ga0318531_103203251	3300031981	Soil	MVEAHISKSKYRHVIASIKLLPAAAPLGFAYVAALGIAT
Ga0318570_100914931	3300032054	Soil	TSQPGFDRKMVEAHISKSKYRHVIASIKLLTAAAPLGFAYVTAFGIAT
Ga0318570_101679711	3300032054	Soil	MMVQAHISKSRYRHIIASIKLLTAAAPLGFARVAARGIAT
Ga0318505_104322951	3300032060	Soil	MVEAHISKSKYRHVIASIKLLTAAAPLGFAYVAAVGIVT
Ga0318505_105612241	3300032060	Soil	VQAHISKSRYRHIIASIKLLTAAAPLGFACVAARGIAT
Ga0318524_102026242	3300032067	Soil	SQPGFDRKMVEAHISKSKYRHVIASIKLLTAAAPLGFAYVTAFGIAT
Ga0306924_110196051	3300032076	Soil	VEAHISKPRYRHVIASIKLLRAAAPPGFAYVAVLGIAT
Ga0335085_100369952	3300032770	Soil	MVGAHISKSKYRHVIASIKLLTAAAPPGFAYVAARGIAT
Ga0335085_100383932	3300032770	Soil	MGMMAAAHISKSGYRHVSASIKLLTAAAPLGFAYVAAPGIAT
Ga0335085_125565372	3300032770	Soil	MMAEAHISKSKYRHVIASIKLLTAAAPLGSASVTAPGIAT
Ga0335082_104060642	3300032782	Soil	MMVEAHISKSKYRHVIASIKLLTAAAPPGSAYLAALGIAT
Ga0335079_105566152	3300032783	Soil	MMVEAHISKSKYRHLIASIKLLTAAAPLGFAYVAAPGIAT
Ga0335079_119371522	3300032783	Soil	MMAEAHISKPRYRHVIASIKLLTAAAPLGFAYMAARGIAT
Ga0335078_1000889613	3300032805	Soil	MMVEAHISKPRYRHVIASIKLLTAAAPLGFAYMAARGIAT
Ga0335078_111899502	3300032805	Soil	MMVEAHISKSKYRHLIASIKLLTAAAPLGFAYVAARGIGT
Ga0335078_122811272	3300032805	Soil	MMVEAHISKSKYRHVIASIKLLTAAAPLGVAYVTALGIAT
Ga0335070_103605742	3300032829	Soil	MMAEAHISKSKYRHVIASIKLLTAAAPLGSAYVAAFGVAT
Ga0335069_104013802	3300032893	Soil	MMVEAHVSTSKYRHGIVSIKPLTAATPLGSAYAAARGIAT
Ga0335069_105975742	3300032893	Soil	MVAAHIPQYRYRHVIASIKLLTAAAPLGFAYVAARGIAT
Ga0335069_109418732	3300032893	Soil	MAEARISKSRYRHLIASIKLLTAAPPGFAYAAALGIAA
Ga0335071_104557672	3300032897	Soil	MMAEAHISKSKYRHVIASIKLLTAAAPLGFAYVAARGSAT
Ga0335072_107101642	3300032898	Soil	MMVEAHISKSRYRHVIASIKLLTAAAPLGFAHVAARGIVI
Ga0335083_103179542	3300032954	Soil	MMVGAHISKSKYRHVIASIKLLTAAAPPGFAYVAARGIAT
Ga0335076_102960352	3300032955	Soil	MMVEERISKSKYRHVIAPIKLLTAPAPPGVAYVAALGIAA
Ga0335084_105457242	3300033004	Soil	MVEAHISKSKYRHVIASIKLLTAAAPPGFAYVAARGIAT
Ga0335073_108064152	3300033134	Soil	MGMMAAAHISKSGYRHVSASIKLLTAAAPLGFAYVAVPGIAT
Ga0335077_108968952	3300033158	Soil	MMVEAHISKSKYRHLIASIKLLTAAAPLGFAYVAARGIAT

Hidden Markov Model


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