Metagenome / Metatranscriptome Family F090113

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F090113
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	140 residues
Representative Sequence	MATTPNTTRETVNEAASEAIRATSEASRRTLLGAQDAMRTTRTYMAESTEANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQASVRAGDGLLASAASGEMSGQEDTRQKR
Number of Associated Samples	75
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.70 %
% of genes near scaffold ends (potentially truncated)	19.44 %
% of genes from short scaffolds (< 2000 bps)	99.07 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (92.593 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil (71.296 % of family members)
Environment Ontology (ENVO)	Unclassified (87.963 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (96.296 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 72.51% β-sheet: 0.00% Coil/Unstructured: 27.49%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00231	ATP-synt	0.93
PF05532	CsbD	0.93
PF13561	adh_short_C2	0.93
PF03551	PadR	0.93
PF14338	Mrr_N	0.93
PF03992	ABM	0.93
PF01243	Putative_PNPOx	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0224	FoF1-type ATP synthase, gamma subunit	Energy production and conversion [C]	0.93
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.93
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.93
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.93
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.59 %
All Organisms	root	All Organisms	7.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.59 %
cellular organisms	root	All Organisms → cellular organisms	7.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.59 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.59 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.59 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.59 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.59 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005179\|Ga0066684_10804701	Not Available	621	Open in IMG/M
3300005184\|Ga0066671_10114015	Not Available	1521	Open in IMG/M
3300005184\|Ga0066671_10229771	Not Available	1132	Open in IMG/M
3300005560\|Ga0066670_10150916	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1358	Open in IMG/M
3300005575\|Ga0066702_10402095	Not Available	836	Open in IMG/M
3300006800\|Ga0066660_10464958	Not Available	1060	Open in IMG/M
3300006800\|Ga0066660_11358365	Not Available	556	Open in IMG/M
3300009012\|Ga0066710_100643710	All Organisms → cellular organisms → Bacteria	1612	Open in IMG/M
3300009137\|Ga0066709_101921066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	823	Open in IMG/M
3300010061\|Ga0127462_133143	Not Available	516	Open in IMG/M
3300010061\|Ga0127462_156382	Not Available	578	Open in IMG/M
3300010070\|Ga0127441_125696	Not Available	744	Open in IMG/M
3300010071\|Ga0127477_142650	Not Available	712	Open in IMG/M
3300010071\|Ga0127477_162077	Not Available	549	Open in IMG/M
3300010072\|Ga0127428_166815	Not Available	565	Open in IMG/M
3300010076\|Ga0127430_131333	Not Available	551	Open in IMG/M
3300010080\|Ga0127448_171320	Not Available	511	Open in IMG/M
3300010083\|Ga0127478_1099210	Not Available	729	Open in IMG/M
3300010094\|Ga0127480_1041800	Not Available	531	Open in IMG/M
3300010096\|Ga0127473_1037617	Not Available	596	Open in IMG/M
3300010100\|Ga0127440_1123469	Not Available	561	Open in IMG/M
3300010101\|Ga0127481_1018386	Not Available	593	Open in IMG/M
3300010106\|Ga0127472_1091314	Not Available	813	Open in IMG/M
3300010106\|Ga0127472_1097671	Not Available	549	Open in IMG/M
3300010106\|Ga0127472_1116197	Not Available	543	Open in IMG/M
3300010109\|Ga0127497_1026199	Not Available	503	Open in IMG/M
3300010112\|Ga0127458_1011940	Not Available	560	Open in IMG/M
3300010112\|Ga0127458_1095910	Not Available	743	Open in IMG/M
3300010113\|Ga0127444_1143075	Not Available	891	Open in IMG/M
3300010114\|Ga0127460_1134951	Not Available	650	Open in IMG/M
3300010117\|Ga0127449_1011458	Not Available	510	Open in IMG/M
3300010118\|Ga0127465_1120036	Not Available	1180	Open in IMG/M
3300010118\|Ga0127465_1162913	Not Available	807	Open in IMG/M
3300010119\|Ga0127452_1001419	Not Available	816	Open in IMG/M
3300010122\|Ga0127488_1166114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	739	Open in IMG/M
3300010123\|Ga0127479_1151055	Not Available	559	Open in IMG/M
3300010125\|Ga0127443_1053802	Not Available	736	Open in IMG/M
3300010125\|Ga0127443_1135706	Not Available	528	Open in IMG/M
3300010125\|Ga0127443_1150907	Not Available	706	Open in IMG/M
3300010126\|Ga0127482_1078243	Not Available	632	Open in IMG/M
3300010130\|Ga0127493_1096880	Not Available	763	Open in IMG/M
3300010132\|Ga0127455_1180009	Not Available	578	Open in IMG/M
3300010139\|Ga0127464_1212829	Not Available	523	Open in IMG/M
3300010140\|Ga0127456_1242866	Not Available	708	Open in IMG/M
3300010141\|Ga0127499_1172290	Not Available	504	Open in IMG/M
3300010142\|Ga0127483_1045592	Not Available	562	Open in IMG/M
3300010145\|Ga0126321_1111902	Not Available	703	Open in IMG/M
3300010145\|Ga0126321_1164945	Not Available	698	Open in IMG/M
3300010145\|Ga0126321_1190468	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300010145\|Ga0126321_1197669	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300010145\|Ga0126321_1225762	Not Available	754	Open in IMG/M
3300010145\|Ga0126321_1257537	Not Available	1314	Open in IMG/M
3300010145\|Ga0126321_1331677	Not Available	502	Open in IMG/M
3300010146\|Ga0126320_1269645	Not Available	696	Open in IMG/M
3300010146\|Ga0126320_1462388	Not Available	582	Open in IMG/M
3300010896\|Ga0138111_1042560	Not Available	676	Open in IMG/M
3300010896\|Ga0138111_1131769	Not Available	509	Open in IMG/M
3300012212\|Ga0150985_112788612	Not Available	682	Open in IMG/M
3300012224\|Ga0134028_1254044	Not Available	583	Open in IMG/M
3300012224\|Ga0134028_1291630	Not Available	506	Open in IMG/M
3300012364\|Ga0134027_1001020	Not Available	771	Open in IMG/M
3300012364\|Ga0134027_1029780	Not Available	573	Open in IMG/M
3300012371\|Ga0134022_1128080	Not Available	883	Open in IMG/M
3300012371\|Ga0134022_1187757	Not Available	532	Open in IMG/M
3300012372\|Ga0134037_1030677	Not Available	671	Open in IMG/M
3300012372\|Ga0134037_1067845	Not Available	505	Open in IMG/M
3300012372\|Ga0134037_1200136	Not Available	564	Open in IMG/M
3300012373\|Ga0134042_1129764	Not Available	744	Open in IMG/M
3300012374\|Ga0134039_1057043	Not Available	501	Open in IMG/M
3300012375\|Ga0134034_1103793	Not Available	641	Open in IMG/M
3300012376\|Ga0134032_1221025	Not Available	679	Open in IMG/M
3300012377\|Ga0134029_1179735	Not Available	770	Open in IMG/M
3300012380\|Ga0134047_1228178	Not Available	977	Open in IMG/M
3300012381\|Ga0134026_1241956	Not Available	506	Open in IMG/M
3300012383\|Ga0134033_1081824	Not Available	587	Open in IMG/M
3300012383\|Ga0134033_1282865	Not Available	512	Open in IMG/M
3300012384\|Ga0134036_1266240	Not Available	741	Open in IMG/M
3300012386\|Ga0134046_1011818	Not Available	578	Open in IMG/M
3300012387\|Ga0134030_1112772	Not Available	536	Open in IMG/M
3300012387\|Ga0134030_1158598	Not Available	505	Open in IMG/M
3300012389\|Ga0134040_1009519	Not Available	560	Open in IMG/M
3300012389\|Ga0134040_1073329	Not Available	606	Open in IMG/M
3300012390\|Ga0134054_1108100	Not Available	787	Open in IMG/M
3300012391\|Ga0134035_1233961	Not Available	1344	Open in IMG/M
3300012391\|Ga0134035_1256876	Not Available	696	Open in IMG/M
3300012395\|Ga0134044_1311801	Not Available	669	Open in IMG/M
3300012396\|Ga0134057_1178118	Not Available	695	Open in IMG/M
3300012396\|Ga0134057_1219307	Not Available	513	Open in IMG/M
3300012400\|Ga0134048_1009290	Not Available	632	Open in IMG/M
3300012401\|Ga0134055_1056306	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300012402\|Ga0134059_1363380	Not Available	561	Open in IMG/M
3300012403\|Ga0134049_1177713	Not Available	817	Open in IMG/M
3300012403\|Ga0134049_1287474	Not Available	702	Open in IMG/M
3300012403\|Ga0134049_1366927	Not Available	649	Open in IMG/M
3300012409\|Ga0134045_1011264	Not Available	783	Open in IMG/M
3300012469\|Ga0150984_116518830	Not Available	503	Open in IMG/M
3300014157\|Ga0134078_10236324	Not Available	761	Open in IMG/M
3300018431\|Ga0066655_10256783	Not Available	1119	Open in IMG/M
3300018468\|Ga0066662_10442185	Not Available	1161	Open in IMG/M
3300018468\|Ga0066662_12121106	Not Available	589	Open in IMG/M
3300019279\|Ga0184642_1122035	Not Available	513	Open in IMG/M
3300026312\|Ga0209153_1033433	Not Available	1767	Open in IMG/M
3300026312\|Ga0209153_1185581	Not Available	743	Open in IMG/M
3300026527\|Ga0209059_1322092	Not Available	524	Open in IMG/M
3300026550\|Ga0209474_10463599	Not Available	643	Open in IMG/M
3300026552\|Ga0209577_10056446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3295	Open in IMG/M
3300026552\|Ga0209577_10248807	Not Available	1342	Open in IMG/M
3300034680\|Ga0370541_062649	Not Available	505	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.15%
Host-Associated	Host-Associated	1.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.89%
Aquatic	Environmental → Aquatic	9.26%
Plants	Host-Associated → Plants	1.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.89%
Freshwater	Environmental → Aquatic → Freshwater	9.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.89%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	8.33%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	72.22%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.67%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	8.33%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	71.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.04%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	8.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.63%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010061	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010070	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010071	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010072	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010076	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010080	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010083	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010094	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010096	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010100	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010101	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010106	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010109	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010112	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010113	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010114	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010117	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010118	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010119	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010122	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010123	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010125	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010126	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010130	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010132	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010139	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010140	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010141	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010142	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010896	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012224	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012371	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012372	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012374	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012375	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012377	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012381	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012383	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012384	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012387	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012389	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012391	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012395	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066684_108047011	3300005179	Soil	MATRPETTRQTVNEAASEAMRATSEASRRSLQGAQDAMRTTRAYLAESTEANRKLFQAYAQGVEAAIKGGFEVQNAVFAAGQSVLDASTTSSRDVVQQWTQIAREAQQATLDLWQAGVGAGDKMLGSAGSGEMAGQEATGRRR*
Ga0066671_101140152	3300005184	Soil	MATRPETTRQTVNEAASEAMRATSEASRRSLQGAQDAMRTTRAYLAESTEANRKLFQAYAEGVEAALKGGFEVQNAVVAAGQSILDASTTSSRNVLQQWTEIAHEAQQATLDLWQAGVGAGDKMLASAPSGEMAGQDDRGRRR*
Ga0066671_102297713	3300005184	Soil	MATRPDTTRETVNETTSEAIRATSEASRRTLQSAQDAMQTTRAYMVESTEGNRKLFNAYARGVEAAIKGSFEAQNALMAAGMSFLDASTNSSRDVVQQWTEAALQAQQATLEVWQASVGAGDRLLASTASGEMSGQDDKGRKR*
Ga0066670_101509162	3300005560	Soil	MATRPDTTRQTVNEATSEAMRATSEASRRTLQGAQDAMRTTRAYLAESTEANRTLFQAYAQGVEAALKGGIEVQNAVVAAGQSILDASTTSSRNVVQQWTEIAREAQQAMLDLWQAGVGAGDKMLTSATSGEMAGQEDRGRRR*
Ga0066702_104020953	3300005575	Soil	MATRPDTTRETVNQATNEAIRATSEASRRTLLSAQDAMQTTRAYLEESIEANRKLVNAYAQGVEAAIKGSFEVQNALMAAGMSFLDASTNSSRDVVQQWTEAALQAQQATLEVWQASVGAGDRLLASTASGEMSGQDDKGRKR*
Ga0066660_104649583	3300006800	Soil	MATRPDPTRQTVNEAASEAMRATSEASRRSLQGAQDVMRTTRAYLAESTEANRKLFQAYAEGVEAALKGGFEVQNAVVAAGQSILDASTTSSRNVLQQWTEIAHEAQQATLDLWQAGVGAGDKMLASAPSGEMAGQDDRGRRR*
Ga0066660_113583651	3300006800	Soil	ETVNEAASEAIRATSEASRRTLLSAQDAMRTTRTYMAESTEANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQAGVRAGDGLLASAASGEMSGQEDTRQKRQ*
Ga0066710_1006437103	3300009012	Grasslands Soil	AIRATSEASRRTLLSAQDAMRTTRTYIAESTDANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQAGVHAGDGLLASAATGEMSGQEDTRQKR
Ga0066709_1019210661	3300009137	Grasslands Soil	MATTPNTTRETVNEAASEAIRATSEASRRTLLGAQDAMRTTRTYMAESTEANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMNVWQAGVHAGD
Ga0127462_1331431	3300010061	Grasslands Soil	MATRPDTTRETVNETTSEAIRATSEASRRTLQSAQDAMQTTRAYMVESTEGNRKLFNAYARGVEAALKGGFEVQNAMFAAGMSFLDASTNSSRNVVQQWTEAAHQAQQATLEVWQASAGAGDRLLASSAETAEQAGREETRQRR*
Ga0127462_1563821	3300010061	Grasslands Soil	MATTPNTTRETVNEAASEAIRATSEASRRTLLGAQDAMRTTRTYMAESTEANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQASVRAGDGLLASAASGEMSGQEDTRQKRQ*
Ga0127441_1256961	3300010070	Grasslands Soil	MATTPNTTREAVNEATSEAIRATSEASRRTLQSAQDAMRTTRAYMVESTEANRKLFNAYARGVEAALKGGFEVQNAMFAAGMSFLDASTNSSRNVVQQWTEATREAQQATLDEWQAGFRAAMQYSGLAGAAEQQ*
Ga0127477_1426501	3300010071	Grasslands Soil	MATRPDTTRETVNAATGEAMRATSEASRRTLQGAQDVMRTTSAYLAQSTEANRKLFQAYAQGVEAAIKGGFEVQNAVFAAGQSVLDASTTSSRDVVQQWTQIAREAQQATLDLWQAGVGAGDKMLGSAASGEMAG*
Ga0127477_1620771	3300010071	Grasslands Soil	MVATPDTRRETVNEAAREAIRATSEASRRTLLSAQDAMQMARTYLEESLEANRTLFNAYTRGFEAAIRGRFEIQNAMFAAGMSLLDASTTSSRNVAQQWTEAARQAQQATLEKWQVGVSASDGLLASVSSGELSGQEDKGRKR*
Ga0127428_1668151	3300010072	Grasslands Soil	MATTPNTTRETVNEAASEAIRATSEASRRTLLSAQDAMRTTRTYMAESSEANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQA
Ga0127430_1313331	3300010076	Grasslands Soil	MATTPNTTRETVNEAASEAIRATSEASRRTLLSAQDAMRTTRTYMAESTEANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQAGVRAGDGLLASAASGEMSGQEDPRQKRP*
Ga0127448_1713201	3300010080	Grasslands Soil	MATTPNTTRETVNEAASEAIRATSEASRRTLLSAQDAMRTTRTYMAESTEANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQASVRAGDGLLASAASGEMSGQEDTRQKRQ*
Ga0127478_10992102	3300010083	Grasslands Soil	MATTPNATRETVNEAAGEVIRATSEASRRTLLSAQDAMRTTRTYLADSTEANRKMFNAYTRGMEAAIRGTFEVQNAIFAAGMSFLDTSTNSSRNVVQQWTEAARQAQQATLDVWQASVHAGDKLLASAESGEMSGQEDPRQKRP*
Ga0127480_10418001	3300010094	Grasslands Soil	MATTPNTTRETVNEAASEAIRATSEASRRTLLSAQDAMRTTRTYMAESTEANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQAGVRAGDGLLASAASGEMSGQEDTRQKRPAEERLAAILDPRQRIDTGL*
Ga0127473_10376171	3300010096	Grasslands Soil	MATRPETTRQTVNEAASEAMRATSEASRRSLQGAQDVMRTTSAYLAQSTEANRKLFQAYAQGGEAALKGGFEVQNAVFAAGQSVLDASTTTSRDGLQQWTEIAHEAQQATLDLWQAGVGAGDKMLGSAASGEMAG*
Ga0127440_11234691	3300010100	Grasslands Soil	QGVDSMVVTPDTTRKTVNEATSEAIRATSEASRRTLQSAQDTMETARAYLEQSIEANRKLFSAYAQGIEAALKGGFEVQNSFFAAGMSVLDASTTSSRNVAQQWTEARRQAQQARPQVWQAGVSTGDGLLASVSSGELSGQEDKGRKR*
Ga0127481_10183861	3300010101	Grasslands Soil	MVVTPDTTRKTVNEATSEAIRATSEASRRTLQSAQDTMETARAYLEQSIEANRKLFSAYAQGIEAALKGGFEVQNAFFAAGQSILDASTTSSRNVAQQWTEARRQAQQARLQVWQAGVSAGDGLLASVSSGELSGQEDKGRKR*
Ga0127472_10913141	3300010106	Grasslands Soil	VNAAASEAMRATSEASRRTLQGAQDVMRTTSAYLAQSTEANRKLFQAYAQGGEAALKGGFEVQNAVFAAGQSVLDASTTTSRDGLQQWTEIAHEAQQATLDLWQAGVGAGDKMLGSAASGEMAG*
Ga0127472_10976711	3300010106	Grasslands Soil	MATKPDPTRQTANEATSEAMRATSEASRRTLQGAQDAMRTTRAYLTEATEANRKLFNAYAEGVEAALKGGFEAQNAAFAAGQSILDASTNSSRNMLQQWTEIAREAQQATLDLWQAGVGAGDKILSSVPSGDMASPDDRGRRR*
Ga0127472_11161971	3300010106	Grasslands Soil	MATTPNATRETVNEAASEVIRATSEASRRTLLSAQDAMRTTRTYLSESTDANRKLFNAYARGMEAAVRGSFEVQNAVFAAGMSFLDTSTNSSRNVVQQWTEAARQAQQATLDVWQASVHAGDKLLASAESGEMSGQEDTRQKR*
Ga0127497_10261991	3300010109	Grasslands Soil	MATTPNTTRETVNEAASEAIRATSEASRRTLLGAQDAMRTTRTYMAESTEANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQASVRAGDGLLASAASGEMSGQEDTRQKR*
Ga0127458_10119401	3300010112	Grasslands Soil	VNEAASEANRATSEAARRTLQSTQDAMQTARTYLEESVEANRKLFNAYAQGLEAAIRGGFEVQNAMFAAGMSFLDASTNSSRSVAQQWTEAAREAQEATLEVWQAGVGAGDKLLGSA*
Ga0127458_10959101	3300010112	Grasslands Soil	MATRPETTRQTVNEAASEAMRATSEASRRSLQGAQDVMRTTSAYLAQSTEANRKLFQAYAQGGEAALKGGFEVQNAVFAAGQSVLDASTTSSRDGLQQWTEIAHEAQQATLDLWQAGVGAGDKMLGSAASGEMAG*
Ga0127444_11430751	3300010113	Grasslands Soil	MATRSDTTRQTVNAAASEPMRATSEASRRSLQGAQDVMRTTSAYLAQSTEANRKLFQAYAQGGEAALKGGFEVQNAVFAAGQSVLDASTTTSRDGLQQWTEIAHEAQQATLDLWQAGVGAGDKMLGSAASGEMAG*
Ga0127460_11349511	3300010114	Grasslands Soil	MATRPETTRQTVNEAASEAMRATSEASRRSLQGAQDAMRTTRAYLAESTEANRKLFQAYAQGVEAALKGGIEVQNAVVAAGQSVLDASTTSSRNVLQQWTEIAREAQQATLDLWQAGVGAGDKMLGSAGSGEMAGQDDRGRRR*
Ga0127449_10114581	3300010117	Grasslands Soil	MATRSETTRQTVNAAASEAMRATSEASRRSLQGAQDVMRTTSAYLAQSTEANRKLFQAYAQGVEAAIKGGFEVQNAVFAAGQSVLDASTTTSRDGLQQWTEIAHEAQQATLDLWQAGVGAGDKMLGSARSGEMAGQ
Ga0127465_11200363	3300010118	Grasslands Soil	MATTPNTTRETVNEAASEAIRATSEASRRTLLSAQDAMRTTRTYMAESSEANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQAGVRAGDGLLASAASGEMPGQEDTRQKRQ*
Ga0127465_11629131	3300010118	Grasslands Soil	MATRPDTTRETVNAATGEAMRATSEASRRTLQGAQDVMRTTSAYLAQSTEANRKLFQAYAQGGEAALKGGFEVQNAVFAAGQSVLDASTTSSRDGLQQWTEIAHEAQQATLDLWQAGVGAGDKMLAGAASGEMAGQDDRGRRR*
Ga0127452_10014191	3300010119	Grasslands Soil	MATRPDTTRETVNAATGEAMRATSEASRRTLQGAQDVMRTTSAYLAQSTEANRKLFQAYAQGGEAALKGGFEVQNAVFAAGQSVLDASTTSSRDGLQQWTEIAHEAQQATLDLWQAGVGAGDKMLGSAASGEMAG*
Ga0127488_11661141	3300010122	Grasslands Soil	MATRPETTRQTVNEAASEAMRATSEASRRSLQGAQDVMRTTSAYLAQSTEANRKLFQAYAQGGEAALKGGFEVQNAVFAAGQSVLDASTTTSRDGLQQWTEIAHEAQQATLDLWQAGVGAGDKMLTSAASGAMTGQEDRGRRR*
Ga0127479_11510551	3300010123	Grasslands Soil	DSMVVTPDTTRKTVNEATSEAIRATSEASRRTLQSAQDTMETARAYLEQSIEANRKLFSAYAQGIEAALKGGFEVQNAFFAAGQSILDASTTSSRNVAQQWTEARRQAQQARLQVWQAGVSAGDGLLASVSSGELSGQEDKGRKR*
Ga0127443_10538021	3300010125	Grasslands Soil	VNEAASEANRATSEAARRTLQSTQDAMQTARTYLEESVEANRKLFNAYAQGLEAAIRGGFEVQNAMFAAGMSFLDASTNSSRSVAQQWTEAAREAQEATLEVWQAGVGAGDGLLASTSSGETSGQDDKGRKR*
Ga0127443_11357061	3300010125	Grasslands Soil	MVATPDTRRETVNEAASEAIRATSEASRRTLLSAQDAMQTARTYLEESLEANRKLFNACTRGFEAAIRGRFEIQNAMFAAGMSLLDASTTSSRNVAQQWTEATRQAQQATLEEWQAGVSAGDGLLPSVSSGEMSGQEDKGRNR*
Ga0127443_11509071	3300010125	Grasslands Soil	VNEATSEASRATSEASRRTLQSAQDTMQTTRTYLEESIEANRKLFSAYAQGIEAALKGGFEVQNAFFAAGMSVLDASTTSSRNVAQQWTEARRQAQQARPQVWQAGVSTGDGLLASVSSGELSGQEDKGRKR*
Ga0127482_10782431	3300010126	Grasslands Soil	MATTPNTTRETVNEAASEAIRATSEASRRTLLSAQDAMRTTRTYIAESTDANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQASVRAGDGLLASAASGEMSGQEDTRQKRQ*
Ga0127493_10968802	3300010130	Grasslands Soil	IRATSEASRRTLQSAQDAMRTTRAYMVESTEANRKLFNAYARGVEAALKGGFEVQNAMFAAGMSFLDASTNSSRNVVQQWTEAAHQAQQATLEVWQASAGAGDRLLASSAETAEQAGREETRQRR*
Ga0127455_11800091	3300010132	Grasslands Soil	MATRPETTRQTVNEAASEAMRATSEASRRTLQGAQDVMRTTSAYLAESTEANRKLFQAYAQGVEAAIKGGFEVQNAVFAAGQSVLDASTTSSRDVVQQWTEIAHEAQQATLDLWQAGVGAGDKMLGSAASGEMAG*
Ga0127464_12128291	3300010139	Grasslands Soil	VNEATSEAMRATSEASRRTLQGAQDAMQTTRAYLAESTEANRKLFQAYAQGVEAALKGGIEVQNAVVAAGQSVLDASTTSSRNVLQQWTEIAREAQQATLDLWQAGIGAGDKMLGSAASGEMAGQEATGRRR*
Ga0127456_12428661	3300010140	Grasslands Soil	MATRPETTRQTVNEAASEAMRATSEASRRSLQGAQDAMRTTRAYLAESTEANRTLFQAYAQGVEAALKGGFEVQNAVVAAGQSVLDASTTSSRNVVQQWTEIAREAQQAMLDLWQAGIGAGDKMLTSATSGEMAGQEDRGRRR*
Ga0127499_11722901	3300010141	Grasslands Soil	MVATPDTRRETVNEAAREAIRATSEASRRTLLSAQDAMQMARTYLEESLEANRTLFNAYTRGFEAAIRGRFEIQNAMFAAGMSLLDASTTSSRNVAQQWTEATRQAQQATLEVWQAGVGVGDRLLASASSGEMSGQDDKGRKR*
Ga0127483_10455921	3300010142	Grasslands Soil	MATRPDTTRETVNAATGEAMRATSEASRRTLQGAQDAMRTTSAYLAESTEANRKLFQAYAQGVEAAIKGGFEVQNAVFAAGQSVLDASTTSSRNVLQQWTEIAHEAQQATLDLWQAGVGAGDKMLGSAGSGEMAGQDDRGRRR*
Ga0126321_11119021	3300010145	Soil	MATRPETTRQPVNEAASEAMRATSEASRRSLQGAQDALRTTRAYLAESTEANRKLFQAYAQGVEATIKGGIEVQNAVFAAGQSVLDASTTSSRDVVQQWTEIAREAQQATLDLWQAGVGAGDKMLGSAGSGAMAGQEDAGRRR*
Ga0126321_11649452	3300010145	Soil	MVVTPDTTRKTVHEATSEAIRATSEASRRTLQSAQDTMETARAYLEQSIEANRKLFSAYAQGIEAALRGSFEVQNAFFAAGMSFLDASTTSSRNVAQQWTEARRQAQQARLEVWQAGVSAGDGLLASVSSAELSGQEDKGRKR*
Ga0126321_11904682	3300010145	Soil	MVATADTTRQTVNEAASEALRATSEASRHTLQGAQDAVRTTRAYLQESTEANRKLFDAYAQGVEAAIKGGFEVQSAMFAAGMSFLDASTNSSRNVVQQWTESAREAQQAMLDKWQAIVGAGDRILASAASGEMSGQEDKGRKR*
Ga0126321_11976691	3300010145	Soil	MATRPDTTRQTVNEAASEAMRATSEASRRTLQGAQDAMQTTRAYLAESTEANRKLFQAYAQGVEAALKGGFEVQNAIFTAGQSVLDASAKSSRDVVQQWTEIAHEAQQATLDLWQAGVGAGDKMLASSASGEMAGQEDRGRRR*
Ga0126321_12257621	3300010145	Soil	MVATPDITRQTVNAAANEAMRATSEASHRTLLSAQDAMRTARTYLEEVLEANRKLFNVYAQGIEATLRGSFEVQNAMFAAGMSLLDASTNSSRNVVQQWTEATRQAQQAKLEIWQAGVGAGDGLLATASSGEMSGQEDKGRKP*
Ga0126321_12575371	3300010145	Soil	MATRPDPTRQTANEATSEAMRATSEASRRTLQGAQDAMRTTRAYLAESTEANRKLFNAYAQGVEAALKGGFEVQNAALAASMSFLDASTNSSRNVVQQWTEIAHEGQQTTLDLWQAGVGAGDKMLGSAASGEMSGQDDRGRRR*
Ga0126321_13316771	3300010145	Soil	MATTPNATRETVNEAASEAIRATSEASRRTLLSAQDAMRTTRTYMAESTEANRKLFNAYVKGCEAAMRNTFEVQNAVFAASMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQAGVRAGDGLLASAASGEMSGQEDTRQKRQ*
Ga0126320_12696451	3300010146	Soil	MATRPETTRETVNEAMRATSEASRRTLLSAQDAMRTTRTYLEESTEANRKLFNACAQGLNAAIKGSFEVQNAVIAAGMSFLDASTNSSRNVVQQWTEVARQAQQATLDMWQSGVGAGDKMLASASPGEMSDQDDKGRKR*
Ga0126320_14623881	3300010146	Soil	MATAPNTTRETVNEATSEARRATSEASRRTLLSAQDAMRTTRTYLEESTEANRKLFNAYARGLETAIKGGVEVQNAVIAAGMSFLDASTDSSRNVVQQWTEVARQAQQATLDVWQAGMHASEGLLASAASGEMSGQDDKGQKR*
Ga0138111_10425601	3300010896	Grasslands Soil	MVATPDTRRETVNEAAREAIRATSEASRRTLLSAQDAMQMARTYLEESLEANRTLFNAYTRGFEAAIRGRFEIQNAMFAAGMSLLDASTTSSRNVAQQWTEAARQAQQATLEEWQAGVSAGDGLLPSVSSGEMSGQEDKGRNR*
Ga0138111_11317691	3300010896	Grasslands Soil	MATTPNTTRETVNEAASEAIRATSEASRRTLLSAQDAMRTTRTYIAESTDANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQAGV
Ga0150985_1127886121	3300012212	Avena Fatua Rhizosphere	MATRPDTTRETVNEAASEANRATSEAARRTLQSTQDAMQTARTYLEESVEANRKLFNAYAQGLEAAIRGGFEVQNAMFAAGMSFLDASTNSSRSVAQQWTEAAREAQEATLEVWQAGVGAGDELLASTSSGETSGQDDKGRKR*
Ga0134028_12540441	3300012224	Grasslands Soil	MATTPNATRETVNEAAGEVIRATSEASRRTLLGAQDAMRTTRTYLTESTEANRKLFNAYARGMEAAVKGTFEVQNAVFAAGMSFLDTSTNSSRNVVQQWTEAARQAQQATLDVWQASVHAGDKLLASAESGEMSGQEDPRQKRP*
Ga0134028_12916301	3300012224	Grasslands Soil	MATTPNATRETVNEAAGEVIRATSEASRRTLLSAQDAMRTTRTYLADSTEANRKMFNAYTRGMEAAIRGTFEVQNAIFAAGMSFLDTSTNSSRNVVQQWTEAARQAQQATLDVWQAGVQAGDRLLASAESSEVAGREDKGQKR*
Ga0134027_10010201	3300012364	Grasslands Soil	MATTPNTTRETVNEAASEAIRATSEASRRTLLSAQDAMRTTRTYMAESTEANRKLFSAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQAGVRAGDGLLASAASGEMSGQEDTRQKRQ*
Ga0134027_10297801	3300012364	Grasslands Soil	MATTPNTTRETVNEAASEAIRATSEASRRTLLSAQDAMRTTRTYMAESSEANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQASVRAGDGLLASAASGEMSGQEDTRQKRQ*
Ga0134022_11280801	3300012371	Grasslands Soil	VNAAASEAMRATSEASRRTLQGAQDVMRTTRAYLTESTEANRKLFQAYAQGVEAALKGGIEVQNAVVAAGQSVLDASTTSSRNVLQQWTEIAREAQQATLDLWQAGVGAGDKMLGSAGSGEMAGQDDRGRRR*
Ga0134022_11877571	3300012371	Grasslands Soil	VNEATSEASRATSEASRRTLQSAQDTMQTTRTYLEESIEANRKLFSAYAQGIEAALKGGFEVQNAFFAAGQSILDASTTSSRNVAQQWTEARRQAQQARLQVWQAGVSTGDGLLASVSSGELSGQEDKGRKR*
Ga0134037_10306771	3300012372	Grasslands Soil	MATTPNTTRETVNEAASEAIRATSEASRRTLLSAQDAMRTTRTYMAESTEANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQAGVRAGDGLLASAASGEMSGQEDTRQKRQ*
Ga0134037_10678451	3300012372	Grasslands Soil	VNDVRRTEGGHDMATTPNATRETVNEAASEVIRATSEASRRTLLSAQDAMRTTRTYLSESTDANRKLFNAYARGMEAAVRGSFEVQNAVFAAGMSFLDTSTNSSRNVVQQWTEAARQAQQATLDVWHASVHAGDKLLASAESGEMSGQEDTRQKR*
Ga0134037_12001361	3300012372	Grasslands Soil	MATTPNATRETVNEAAGEVIRATSEASRRTLLGAQDAMRTTRTYLTESTEANRKLFNAYARGMEAAVKGTFEVQNAVFAAGMSFLDTSTNSSRNVVQQWTEAARQAQQATLDVWQASVHAGDKLLASAESGEMSGQEDPRQKR
Ga0134042_11297641	3300012373	Grasslands Soil	MATTPNTTRETVNEAASESIRATSEASRRTLLGAQDAMRTTRTYMAESTEANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQASVRAGDGLLASAASGEMSGQEDTRQKRQ*
Ga0134039_10570431	3300012374	Grasslands Soil	VNYVRRTEGGHDMATTPNATRETVNEAASEVIRATSEASRRTLLSAQDAMRTTLTYLTESTEANRKLFNAYTRGMEAAVRGSFEVQNAVFAAGMSFLDTSTNSSRNVVQQWTEAARQAQQATLDVWQASVHAGDKLLASAESGEMSGQEDPRQKRP*
Ga0134034_11037932	3300012375	Grasslands Soil	MVATPDTRRETVNEAASEAIRATSEASRRTLLSAQDAMQTARTYLEESLEANRKLFNACTRGFEAAIRGRFEIQNAMFAAGMSLLDASTTSSRNVAQQWTEATRQAQQATLEVWQAGVGAGDKLLGSA*
Ga0134032_12210251	3300012376	Grasslands Soil	MATRPDSPRQTVNESASEAMRATSEASRRTIQSAQDAMRTTRAYLEKSTEANRKLFHAYAEGGEAALKGGFEVQNALFTAGQSVLDASAKSSRDVVQQWTEIAHEAQQATLDLWQAGVGAGDKMLGSAASGEMAG*
Ga0134029_11797351	3300012377	Grasslands Soil	MATKPDPTRQTVNEATSEAMRATSEASRRTLQGAQDAMRTTRAYLAESTEANRKLFQAYAEGVEAALKGGFEVQNAVFAAGQSVLDASTTTSRDGLQQWTEIAHEAQQATLDLWQAGVGAGDKMLGSAGSGEMAGQDDRGRRR*
Ga0134047_12281782	3300012380	Grasslands Soil	MATRSETTRQTVNAAASEAMRATSEASRRSLQGAQDVMRTTSAYLAQSTEANRKLFQAYAQGGEAALKGGFEVQNAVFAAGQSVLDASTTTSRDGLQQWTEIAHESQQATLDLWQAGVGAGDKMLGSAASGEMAG*
Ga0134026_12419561	3300012381	Grasslands Soil	MATTPNTTRETVNEAASEAIRATSEASRRTLLSAQDAMRTTRTYMAESSEANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQAGVRAGDGLLASAASGEMSGQEDTRQKRQ*
Ga0134033_10818241	3300012383	Grasslands Soil	MATRPDTTRETVNAATGEAMRATSEASRRTLQGAQDVMRTTSAYLAQSTEANRKLFQAYAQGGEAALKGGFEVQNAVFAAGQSVLDASTTTSRDGLQQWTEIAHEAQQATLDLWQAGVGAGDKMLGSAASGEMAG*
Ga0134033_12828651	3300012383	Grasslands Soil	MATTPNATRETVNEAAGEVIRATSEASRRTLLSAQDAMRTTRTYLADSTEANRKMFNAYTRGMEAAIRGTFEVQNAIFAAGMSFLDTSTNSSRIVVQQWTEAARQAQQATLDVWQAGVQAGDRLLASAESSEVAGREDKGQKR*
Ga0134036_12662401	3300012384	Grasslands Soil	MATTPNATRETVNEAAGEVIRATSEASRRTLLGAQDAMRTTRTYLTESTEANRKLFNAYARGMEAAVKGTFEVQNAVFAAGMSFLDTSTNSSRNVVQQWTEAARQAQQATLDVWQASVHAGDKLLASAESGEMSGQEDTRQKR*
Ga0134046_10118181	3300012386	Grasslands Soil	MVATPDTRRETVNEAAREAIRATSEASRRTLLSAQDAMQMARTYLEESLEANRRLFNAYTRGLEAAIRGRFEIQNAMFAAGMSLLDASTTSSRNVAQQWTEAARQAQQATLEEWQAGVSAGDGLLPSVSSGEMSGQEDKGRNR*
Ga0134030_11127721	3300012387	Grasslands Soil	MATRPETTRQTVNEAASEAMRATSEASRRSLQGAQDAMRTTRAYLEESTEANRKLFHAYAEGGEAALKGGFEVQNAVFAAGQSVLDASTTTSRDGLQQWTEIAHEAQQATLDLWQAGVGAGDKMLTSAASGAMTGQEDRGRRR*
Ga0134030_11585981	3300012387	Grasslands Soil	MATTPNATRETVNEAAGEVIRATSEASRRTLLGAQDAMRTTRTYLTVSTEANRKLFNAYARGMEAAVKGTFEVQNAVFAAGMSFLDTSTNSSRNVVQQWTEAARQAQQATLDVWQASVHAGDKLLASAESGEMSGQEDPRQKRP*
Ga0134040_10095191	3300012389	Grasslands Soil	MATRSETTRQTVNAAASEAMRATSEASRRSLQGAQDVMRTTSAYLAQSTEANRKLFQAYAQGGEAALKGGFEVQNAVFAAGQSVLDASTTTSRDGLQQWTEIAHEAQQATLDLWQAGVGAGDKMLGSAASGDMAG*
Ga0134040_10733291	3300012389	Grasslands Soil	MATSPNTTREAVNEATSEAIRATSEASRRTLQSAQDAMRTTRAYMVESTEANRKLFSAYARGVEAAIRGGFEVQNALMAAGMSFLDASTNSSRNMVQQWTEATREAQQATLDEWQAGFRAAMQYSGLAGAAEQQ*
Ga0134054_11081001	3300012390	Grasslands Soil	MATRPDTTRETVNAATGEAMRATSEASRRTLQGAQDVMRTTSAYLAQSTEANRKLFQAYAQGVEAALKGGFEVQNAVFAAGQSVLDASTTSSRDGLQQWTEIAHEAQQATLDLWQAGVGAGDKMLGSAASGEMAG*
Ga0134035_12339611	3300012391	Grasslands Soil	MATRPETTRQTVNEAASEAMRATSEASRRSLQGAQDAMRTTRAYLTESTEANRKLFQAYAQGVEAALKGGIEVQNAVVAAGQSVLDASTTSSRNVLQQWTEIAREAQQATLDLWQAGVGAGDKMLGSAGSGEMAGQEATGRRR*
Ga0134035_12568761	3300012391	Grasslands Soil	VNEAASEANRATSEAARRTLQSTQDAMQTARTYLEESVEANRKLFNAYAQGLEAAIRGGFEVQNAMFAAGMSFLDASTNSSRNVAQQWTEAAREAQEATLEVWQAGVGAGDELLASPSSGETSGQDDKGRKR*
Ga0134044_13118011	3300012395	Grasslands Soil	AIRATSEASRRTLQSAQDAMRTTRAYMVESTEANRKLFNAYARGVEAALKGGFEVQNAMFAAGMSFLDASTNSSRNVVQQWTEAAHQAQQATLEVWQASAGAGDRLLASSAETAEQAGREETRQRR*
Ga0134057_11781181	3300012396	Grasslands Soil	VNEAASEANRATSEAARRTLQSTQDAMQTARTYLEESVEANRKLFNAYAQGLEAAIRGGFEVQNAMFAAGMSFLDASTNSSRNVAQQWTEAAREAQEATLEVWQAGVGAGDELLASASSGETSGQDDKGRKR*
Ga0134057_12193071	3300012396	Grasslands Soil	MATTPNTTRETVNEAASEAIRATSEASRRTLLGAQDAMRTTRTYMAESTEANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQASVRAGDGLLASAASGEMSGQEDTRQKR
Ga0134048_10092901	3300012400	Grasslands Soil	MATRPDTTRETVNETTSEAIRATSEASRRTLQSAQDAMQTTRAYMVESTEGNRKLFNAYARGVEAAIKGSFEAQNALMAAGMSFLDASTNSSRDVVQQWTEATQQAQQATLEVWQASAGVGDRLLASTAPGGMSGQEDKGRKR*
Ga0134055_10563063	3300012401	Grasslands Soil	AASEAIRATSEASRRTLLGAQDAMRTTRTYMAESTEANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAIRQAQQATMDVWQASVRAGDGLLASAASGEMSGQEDTRQKRQ*
Ga0134059_13633801	3300012402	Grasslands Soil	MATSPNTTREAVNEATSEAIRATSEASRRTLQSAQDAMRTTRAYMVESTEANRKLFSAYARGVEAAIRGGFEVQNALMVAGMSFLDVSTNSSRNVVQQWTEAAHQAQQASLEVWQASAGAGDRLLASTASGEMSGQEDKGRKR*
Ga0134049_11777131	3300012403	Grasslands Soil	MATTPNTTRETVNEAASEAIRATSEASRRTLLSAQDAMRTTRTYIAESTDANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQAGVRAGDGLLASAASGEMSGQEDTRQKRQ*
Ga0134049_12874742	3300012403	Grasslands Soil	MATRPDSPRQTVNESASEAMRATSEASRRTLQGAQDVMRTTSAYLAQSTEANRKLFQAYAQGGEAALKGGFEVQNAVFAAGQSVLDASTTSSRDGLQQWTEIAHEAQQATLDLWQAGVGAGDKMLGSAASGEMAG*
Ga0134049_13669271	3300012403	Grasslands Soil	MATRPETTRQTVNEAASEAMRATSEASRRSLQGAQDAMRTTRAYLTESTEANRKLFQAYAQGVEAALKGGIEVQNAVVAAGQSVLDASTTSSRNVLQQWTEIAREAQQATLDLWQAGIGAGDKMLGSAGSGEMAGQEATGRRR*
Ga0134045_10112641	3300012409	Grasslands Soil	MATRPDTTRETVNAATGEAMRATSEASRRTLQGAQDVMRTTSAYLAESTEANRKLFQAYAQGVEAAIKGGFEVQNAVFAAGQSVLDASTTSSRDGLQQWTEIAHEAQQATLDLWQAGVGAGDKMLGSAASGEMAG*
Ga0150984_1165188301	3300012469	Avena Fatua Rhizosphere	MATTPNTTREAVNEATSEAIRATSEASRRTLQSAQDAMRTTRAYMVESTEANRKLFNAYARGVEATLKGGFEVQNAMFAAGMSFLDASTNSSRNVVQQWTEAAHQAQQATLEVWQASAGAGDRLLASSAETAEQAGREETRQRR*
Ga0134078_102363241	3300014157	Grasslands Soil	MATKPNTTRETVNEAASEAIRATSEASRRTLLSAQDAMRTTRTYMAESTEANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQAGVRAGDGLLASAASGEMSGQEDTRQKRQ*
Ga0066655_102567831	3300018431	Grasslands Soil	MATRPETTRQTVNEAASEAMRATSEASRRSLQGAQDAMRTTRAYLAESTEANRKLFQAYAQGVEAALKGGIEVQNAVVAAGQSVLDASTTSSRNVLQQWTEIAREAQQATLDLWQAGVGAGDKMLGSAGSGEMAGQDDRGRRR
Ga0066662_104421852	3300018468	Grasslands Soil	MATRPDTTRETVNETTSEAIRATSEASRRTLQSAQDAMQTTRAYMVESTEGNRKLFNAYARGVEAAIKGSFEAQNALMAAGMSFLDASTNSSRDVVQQWTEAALQAQQATLEVWQASVGAGDRLLASTASGEMSGQDDKGRKR
Ga0066662_121211061	3300018468	Grasslands Soil	MATSPNTTREAVNEATSEAIRATSEASRRTLQSAQDAMRTTRAYMVESTEANRKLFSAYARGVEAAIRGGFEVQNALMAAGMSFLDASTNSSRNVVQQWTEATREAQQATLDEWQAGFRAAMQYSGLAGAAEQQ
Ga0184642_11220351	3300019279	Groundwater Sediment	MATTPNTTRETVNEAASEAIRATSEASRRTLLSAQDAMRTTRTYMAESTEANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWQAGVRAGDGLLASAASGEMSGQEDTRQKRQ
Ga0209153_10334331	3300026312	Soil	MATRPDPTRQTVNEAASEAMRATSEASRRSLQGAQDVMRTTRAYLAESTEANRRLFQAYAEGVEAALKGGFEVQNAVVAAGQSILDASTTSSRNVLQQWTEIAHEAQQATLDLWQAGVGAGDKMLASAPSGEMAGQDDRGRRR
Ga0209153_11855811	3300026312	Soil	DRMATRPDTTRETVNETTSEAIRATSEASRRTLQSAQDAMQTTRAYMVESTEGNRKLFNAYARGVEAAIKGSFEAQNALMAAGMSFLDASTNSSRDVVQQWTEAALQAQQATLEVWQASVGAGDRLLASTASGEMSGQDDKGRKR
Ga0209059_13220921	3300026527	Soil	TRPDTTRETVNQATNEAIRATSEASRRTLLSAQDAMQTTRAYLEESIEANRKLVNAYAQGVEAAIKGSFEVQNALMAAGMSFLDASTNSSRDVVQQWTEAALQAQQATLEVWQASVGAGDRLLASTASGEMSGQDDKGRKR
Ga0209474_104635991	3300026550	Soil	MATTPNATRETVNEAAGEVIRATSEASRRTLLGAQDAMRTTRTYLTESTEANRKLFNAYARGMEAAVKGTFEVQNAVFAAGMSFLDTSTNSSRNVVQQWTEAARQAQQATLDVWQASVHAGDKLLASAESGEMSGQEDPRQKRP
Ga0209577_100564464	3300026552	Soil	MATRPDTTRETVNETTSEAIRATSEASRRTLQSAQDAMQMTRAYMVESTEGNRKLFNAYARGVEAAIKGSFEAQNALMAAGMSFLDASTNSSRDVVQQWTEAALQAQQATLEVWQASVGAGDRLLASTASGEMSGQDDKGRKR
Ga0209577_102488072	3300026552	Soil	MATRPDPTRQTVNEAASEAMRATSEASRRSLQGAQDVMRTTRAYLAESTEANRKLFQAYAEGVEAALKGGFEVQNAVVAAGQSILDASTTSSRNVLQQWTEIAHEAQQATLDLWQAGVGAGDKMLASAPSGEMAGQDDRGRRR
Ga0370541_062649_93_494	3300034680	Soil	VNEAASEAIRATSEASRRTLLSAQDAMRTTRTYMAESTEANRKLFNAYVKGCEAAMRNTFEVQNAVFAAGMSFIDASAGSSRNVVQQWTEAMRQAQQATMDVWLAGVRAGDGLLASAASGEMSGQEDTRQKRQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090113

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences