Metagenome / Metatranscriptome Family F090145

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090145
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	45 residues
Representative Sequence	ALEFYDRWLPGTMRRITGITRTCMPQCVTLRSPGDWAARPGYR
Number of Associated Samples	93
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	98.15 %
% of genes from short scaffolds (< 2000 bps)	97.22 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.963 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.482 % of family members)
Environment Ontology (ENVO)	Unclassified (36.111 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.148 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.44% β-sheet: 0.00% Coil/Unstructured: 60.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF04672	Methyltransf_19	35.19
PF00392	GntR	11.11
PF04149	DUF397	3.70
PF01402	RHH_1	3.70
PF13023	HD_3	0.93
PF13560	HTH_31	0.93
PF12728	HTH_17	0.93
PF01936	NYN	0.93
PF13581	HATPase_c_2	0.93
PF00005	ABC_tran	0.93
PF01850	PIN	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
All Organisms	root	All Organisms	37.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
cellular organisms	root	All Organisms → cellular organisms	37.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	32.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	3.70 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	2.78 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.78 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3.70 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	2.78 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.85 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.93 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	3.70 %
Actinospica	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica	2.78 %
Planobispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora	1.85 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.93 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	3.70 %
Actinospica robiniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	2.78 %
Planobispora longispora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora longispora	1.85 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.93 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005175\|Ga0066673_10389813	Not Available	813	Open in IMG/M
3300005332\|Ga0066388_103891310	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300005445\|Ga0070708_100975034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	795	Open in IMG/M
3300005467\|Ga0070706_101114035	Not Available	726	Open in IMG/M
3300005549\|Ga0070704_101943314	Not Available	546	Open in IMG/M
3300005610\|Ga0070763_10057145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1871	Open in IMG/M
3300006028\|Ga0070717_10445403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1167	Open in IMG/M
3300006796\|Ga0066665_10780503	Not Available	755	Open in IMG/M
3300009520\|Ga0116214_1101111	Not Available	1060	Open in IMG/M
3300009525\|Ga0116220_10503607	Not Available	550	Open in IMG/M
3300009700\|Ga0116217_10855257	Not Available	559	Open in IMG/M
3300010366\|Ga0126379_13678441	Not Available	514	Open in IMG/M
3300010379\|Ga0136449_101342363	Not Available	1110	Open in IMG/M
3300010379\|Ga0136449_102284239	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300010379\|Ga0136449_102937985	Not Available	668	Open in IMG/M
3300010379\|Ga0136449_103384123	Not Available	611	Open in IMG/M
3300010396\|Ga0134126_12040880	Not Available	627	Open in IMG/M
3300010876\|Ga0126361_10209277	Not Available	1528	Open in IMG/M
3300012356\|Ga0137371_11079730	Not Available	605	Open in IMG/M
3300012357\|Ga0137384_11115040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	631	Open in IMG/M
3300013104\|Ga0157370_11337142	Not Available	645	Open in IMG/M
3300013105\|Ga0157369_11571865	Not Available	669	Open in IMG/M
3300013307\|Ga0157372_10959569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	991	Open in IMG/M
3300013307\|Ga0157372_12093226	Not Available	650	Open in IMG/M
3300015241\|Ga0137418_10772072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	725	Open in IMG/M
3300015357\|Ga0134072_10413920	Not Available	534	Open in IMG/M
3300016294\|Ga0182041_10534594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1021	Open in IMG/M
3300016341\|Ga0182035_11059913	Not Available	720	Open in IMG/M
3300016422\|Ga0182039_10966816	Not Available	763	Open in IMG/M
3300016445\|Ga0182038_11012480	Not Available	736	Open in IMG/M
3300017928\|Ga0187806_1262609	Not Available	600	Open in IMG/M
3300017932\|Ga0187814_10392099	Not Available	540	Open in IMG/M
3300017943\|Ga0187819_10546766	Not Available	658	Open in IMG/M
3300017946\|Ga0187879_10255964	Not Available	975	Open in IMG/M
3300017973\|Ga0187780_10313375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	1104	Open in IMG/M
3300017974\|Ga0187777_11471079	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300018001\|Ga0187815_10397284	Not Available	587	Open in IMG/M
3300018012\|Ga0187810_10377320	Not Available	594	Open in IMG/M
3300018044\|Ga0187890_10298691	Not Available	904	Open in IMG/M
3300018058\|Ga0187766_10008015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6092	Open in IMG/M
3300018058\|Ga0187766_10564846	Not Available	773	Open in IMG/M
3300018058\|Ga0187766_11116658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300018058\|Ga0187766_11269588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	536	Open in IMG/M
3300018060\|Ga0187765_10552959	Not Available	736	Open in IMG/M
3300018085\|Ga0187772_11324226	Not Available	533	Open in IMG/M
3300018086\|Ga0187769_10645170	Not Available	800	Open in IMG/M
3300020581\|Ga0210399_11053053	Not Available	653	Open in IMG/M
3300020581\|Ga0210399_11081199	Not Available	643	Open in IMG/M
3300021180\|Ga0210396_10361245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1280	Open in IMG/M
3300021181\|Ga0210388_11558145	Not Available	550	Open in IMG/M
3300021407\|Ga0210383_10272797	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300021432\|Ga0210384_11136576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	685	Open in IMG/M
3300021479\|Ga0210410_10894006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	775	Open in IMG/M
3300021559\|Ga0210409_11671322	Not Available	513	Open in IMG/M
3300021560\|Ga0126371_13429127	Not Available	535	Open in IMG/M
3300021860\|Ga0213851_1644227	Not Available	502	Open in IMG/M
3300025900\|Ga0207710_10204722	All Organisms → cellular organisms → Bacteria → Proteobacteria	976	Open in IMG/M
3300025929\|Ga0207664_11914083	Not Available	516	Open in IMG/M
3300027680\|Ga0207826_1093994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	825	Open in IMG/M
3300028879\|Ga0302229_10009019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6199	Open in IMG/M
3300029944\|Ga0311352_11306743	Not Available	548	Open in IMG/M
3300031234\|Ga0302325_12793385	Not Available	572	Open in IMG/M
3300031543\|Ga0318516_10022505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3240	Open in IMG/M
3300031546\|Ga0318538_10778516	Not Available	519	Open in IMG/M
3300031564\|Ga0318573_10208424	Not Available	1037	Open in IMG/M
3300031670\|Ga0307374_10483770	Not Available	673	Open in IMG/M
3300031681\|Ga0318572_10092424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1696	Open in IMG/M
3300031708\|Ga0310686_102692926	Not Available	1486	Open in IMG/M
3300031723\|Ga0318493_10638462	Not Available	595	Open in IMG/M
3300031747\|Ga0318502_10185219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1200	Open in IMG/M
3300031751\|Ga0318494_10221808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1080	Open in IMG/M
3300031751\|Ga0318494_10300129	Not Available	926	Open in IMG/M
3300031765\|Ga0318554_10702402	Not Available	567	Open in IMG/M
3300031770\|Ga0318521_10905836	Not Available	539	Open in IMG/M
3300031798\|Ga0318523_10144908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora longispora	1180	Open in IMG/M
3300031819\|Ga0318568_10956842	Not Available	529	Open in IMG/M
3300031821\|Ga0318567_10642907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	602	Open in IMG/M
3300031831\|Ga0318564_10545933	Not Available	502	Open in IMG/M
3300031835\|Ga0318517_10502895	Not Available	546	Open in IMG/M
3300031845\|Ga0318511_10323708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	699	Open in IMG/M
3300031890\|Ga0306925_10238597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1960	Open in IMG/M
3300031890\|Ga0306925_10333876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1629	Open in IMG/M
3300031893\|Ga0318536_10217406	Not Available	972	Open in IMG/M
3300031910\|Ga0306923_10651913	Not Available	1177	Open in IMG/M
3300031910\|Ga0306923_12062571	Not Available	577	Open in IMG/M
3300031912\|Ga0306921_11521303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	730	Open in IMG/M
3300031945\|Ga0310913_10220655	Not Available	1328	Open in IMG/M
3300031946\|Ga0310910_11148613	Not Available	604	Open in IMG/M
3300032001\|Ga0306922_10536028	Not Available	1245	Open in IMG/M
3300032008\|Ga0318562_10100149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1644	Open in IMG/M
3300032025\|Ga0318507_10154572	Not Available	982	Open in IMG/M
3300032025\|Ga0318507_10166669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora longispora	946	Open in IMG/M
3300032054\|Ga0318570_10170814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	977	Open in IMG/M
3300032067\|Ga0318524_10695534	Not Available	536	Open in IMG/M
3300032076\|Ga0306924_11801873	Not Available	638	Open in IMG/M
3300032091\|Ga0318577_10063336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1681	Open in IMG/M
3300032160\|Ga0311301_11643257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	778	Open in IMG/M
3300032160\|Ga0311301_11745869	Not Available	745	Open in IMG/M
3300032261\|Ga0306920_103712368	Not Available	560	Open in IMG/M
3300032261\|Ga0306920_103742726	Not Available	557	Open in IMG/M
3300032782\|Ga0335082_11350615	Not Available	582	Open in IMG/M
3300032892\|Ga0335081_12255910	Not Available	571	Open in IMG/M
3300032954\|Ga0335083_10342691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1297	Open in IMG/M
3300032955\|Ga0335076_10582581	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1001	Open in IMG/M
3300033134\|Ga0335073_10364717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1705	Open in IMG/M
3300033134\|Ga0335073_11802435	Not Available	571	Open in IMG/M
3300033289\|Ga0310914_11387777	Not Available	605	Open in IMG/M
3300034124\|Ga0370483_0041641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1427	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.37%
Host-Associated	Host-Associated	4.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.96%
Aquatic	Environmental → Aquatic	7.41%
Plants	Host-Associated → Plants	4.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.19%
Freshwater	Environmental → Aquatic → Freshwater	7.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.63%
Peat	Environmental → Terrestrial → Peat	2.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.81%
Loam	Environmental → Terrestrial → Soil → Loam	8.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.78%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Clay	Environmental → Terrestrial → Soil → Clay	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.78%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.04%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.33%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.78%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.78%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.85%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066673_103898132	3300005175	Soil	LEFYDRWLPGTMRRITAITRTCMPHCVMLRGPGDWVARPGYR*
Ga0066388_1038913101	3300005332	Tropical Forest Soil	ALEFYDRWLPGTMRRISGITGKCIPHCMMLRGPGDWAVRPRRA*
Ga0070708_1009750341	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GRPDLARALEFYDRWLPGTMRRISAITGQCMPHCVMLRASGDWAARPRYG*
Ga0070706_1011140351	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	EFYDRWLPGTMRRITGITGKCMPDCVTLRGPGEWTARPGYR*
Ga0070704_1019433141	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LEFYDRWLPGTMRRITGITGKCMPHCVMLRGPGDWAARPGYR*
Ga0070763_100571451	3300005610	Soil	RPDLARALEFYDRWLPGTMRRITGITRACMPHCVMLRGHGDWAARPGYR*
Ga0070717_104454031	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	PGTMRRISAITGQCMPHCVMLRASGDWPARPGYR*
Ga0066665_107805031	3300006796	Soil	TRPDLARTLEFYDGWLPGTMRRITGITGKCMPHCVTLRGPGEWAARPGYH*
Ga0116214_11011111	3300009520	Peatlands Soil	PDLARALEFYDRWLPGTMRRIAGITRTCIPQCVMLRGPGDWAARPGYR*
Ga0116220_105036072	3300009525	Peatlands Soil	LARALEFHDRWLPGTMRRITDITRQCVPQCVMLRSPGDWAARPGYR*
Ga0116217_108552572	3300009700	Peatlands Soil	GGPRPDLARALEFYDRWLPGTMRRITDITRACMPQCVMLRGPGDWNALPRYR*
Ga0126379_136784412	3300010366	Tropical Forest Soil	GRALEFYDRWLPSTMRRIAGITLTCIPHCVTLRSPGDWAARPGYG*
Ga0136449_1013423632	3300010379	Peatlands Soil	RPDLARALEFYDRWLPGTMRRITDITRACMPQCVTLRGPDDWNALPRYR*
Ga0136449_1022842393	3300010379	Peatlands Soil	ARALEFYDRWLPGTMRRITDITRACMPQCVMLRGPGDWNALPRYR*
Ga0136449_1029379851	3300010379	Peatlands Soil	RALEFHDRWLPGTMRRITGITGKCMPHCVMLRGPGDWAARPGYR*
Ga0136449_1033841232	3300010379	Peatlands Soil	LKFYDRWLPGTMSRITHITRTCIPNCVTLRSPSDWAARPGYR*
Ga0134126_120408801	3300010396	Terrestrial Soil	RPDLARALEFYDRWLPGTMRRITGITGKCVPHCVMLRDRGDWAVRPGYR*
Ga0126361_102092774	3300010876	Boreal Forest Soil	LARALEFHDRWLPGTMRRITEITRASTPQCVMLRNPGDWAARPGYR*
Ga0137371_110797302	3300012356	Vadose Zone Soil	ARALEFYDRWLPGTMRRITGITGKCMPHCVMLRGPGQWAARPGYR*
Ga0137384_111150401	3300012357	Vadose Zone Soil	PDLAMALEFYDRWLPGTMRRITGITRTCTPHCVTLRSPGDWAARPGYR*
Ga0157370_113371422	3300013104	Corn Rhizosphere	GTRLDLARALEFYDRWLPGTMRRITGITGKCMPHCVMLRGPGDWAARPGYR*
Ga0157369_115718653	3300013105	Corn Rhizosphere	PGTMRRITGITGKCMPHCVMLRGPSDWAARPGYR*
Ga0157372_109595692	3300013307	Corn Rhizosphere	PDLARALEFYDRWLPGTMRRITSITGKCMPHCVTLRGPGDWAARPGYR*
Ga0157372_120932263	3300013307	Corn Rhizosphere	WLPGTMRRITGITGKCMPHCVMLRGPSDWAARPGYR*
Ga0137418_107720722	3300015241	Vadose Zone Soil	DLARALEFYDRWLPGIMRRITGITGKCMPHCVMLRGTGDWAARPGYR*
Ga0134072_104139202	3300015357	Grasslands Soil	WLPGTMRRITAITRTCMPHCVMLRGPGDWVARPGYR*
Ga0182041_105345941	3300016294	Soil	AAAAGGAGTDLDRALEFYDRWLPGTMRRITVITVITGKCMPQCVLLRGPGDRAARPGYG
Ga0182035_110599131	3300016341	Soil	TGPDLARALEFYDRWLPGNMRRITDITRNCLPQCTTLRSPDDWTARPRYR
Ga0182039_109668161	3300016422	Soil	EFYDRWLPGTMRRVTDITRTCMPQCATLRSPGDWTARPPYR
Ga0182038_110124803	3300016445	Soil	PDLARALEFYDRWLPGTIRRITGITRACMPQCVTLHRPDEWAARPPYR
Ga0187806_12626091	3300017928	Freshwater Sediment	DRWLPGTIRRISDITRTCMPQCATLSSPGGWTARPRYR
Ga0187814_103920991	3300017932	Freshwater Sediment	EFYDRWLPGTMRRISDITRTCMPQCATLSSPGGWTARPRYR
Ga0187819_105467661	3300017943	Freshwater Sediment	ALEFYDRWLPGTMRRITGITRTCMPQCVTLRSPGDWAARPGYR
Ga0187879_102559641	3300017946	Peatland	GNRPDLTRALDFYDRWLPGTMRRITGITRTCTPQCVTLRGPGDQAPLPRYR
Ga0187780_103133751	3300017973	Tropical Peatland	GSRPDLARALEFYDRWLPGTMRRITDITRACLPHCATLRSPGDWASRPGYR
Ga0187777_114710791	3300017974	Tropical Peatland	YAGERPDLARALEFYDRWLPGTMRRITGITRGCTPQCATLRSTGDWPARPGYR
Ga0187815_103972842	3300018001	Freshwater Sediment	ALEFYDRWLPGTMRRITHITRTCMPHCVMLRSPGDWAARPGYR
Ga0187810_103773201	3300018012	Freshwater Sediment	PDLARALEFYDRWLPNTIRHIADITRACMPQCVTLRSPGDWNALPQYR
Ga0187890_102986911	3300018044	Peatland	LEFQDRWLPGTMRRITSFTCECRSQCMTIRSPGNWPARPSYH
Ga0187766_100080151	3300018058	Tropical Peatland	RPDLARALEFYDRWLPGTMRRITGITRGCTPQCATLRSTGDWPARPGYR
Ga0187766_105648461	3300018058	Tropical Peatland	ALEFYDRWLPGTMRRITGITRNCMAQCVMLRGPGDWAARTGYR
Ga0187766_111166582	3300018058	Tropical Peatland	FYDRWLPGTMRRITDITRACLPHCATLRSPGDWAPRPGYR
Ga0187766_112695882	3300018058	Tropical Peatland	ARALEFYDRWLPGTMRRINAITGKCVPECVMLRGPGDWAARTRYR
Ga0187765_105529591	3300018060	Tropical Peatland	DRWLPGTMRRITAITGKCMPHCVMLRDRGDWAARPEYR
Ga0187772_113242262	3300018085	Tropical Peatland	WLPGTMRRITSITRKCIPQCVTLRGPGDWDVRPEYH
Ga0187769_106451703	3300018086	Tropical Peatland	PDLARALEFYDRWLPGTMRRITDITRGCLPQCATLQSPGDWAARPRYR
Ga0210399_110530532	3300020581	Soil	RALEFYDRWLPGTMRRITGITRACMPHCVMLRGHSDWAARPGYR
Ga0210399_110811992	3300020581	Soil	LARALEFYDRWLPGTMRRITGITGKCIPHCAMLRGPGEWTARPGYR
Ga0210396_103612451	3300021180	Soil	LEFYDRWLPGTMRRITGITRKCVPQCAMLRSPGDWTARPSYH
Ga0210388_115581451	3300021181	Soil	ARALEFYDRWLPGTMRRITDITRTCMPQCALLRGPGDWAAHPQYRR
Ga0210383_102727974	3300021407	Soil	ARALEFYDRWLPGTIRRITDITRGCMPQCATLRSHGDWTARPRYR
Ga0210384_111365762	3300021432	Soil	ARALEFYDRWLPGTMRRITGTTGKCMPHCVMLRGTGDWAARPGYR
Ga0210410_108940062	3300021479	Soil	YGGQRPDLARALEFYDRWLPGTMRRISAITGQCMPHCVMLRASGDWAARPRYG
Ga0210409_116713221	3300021559	Soil	ALEFYDRWLPGTMRRITGITGKCMPHCVMLRGPGEWVARPSYR
Ga0126371_134291272	3300021560	Tropical Forest Soil	ARALEFHDRWLPGTMRRITGITAKCVPHCVTLRSPGDWATRSGYR
Ga0213851_16442271	3300021860	Watersheds	DLARALEFYDRWLPGTMRRISDITRTCMPQCATLSSPGGWTARPRYR
Ga0207710_102047224	3300025900	Switchgrass Rhizosphere	GGTRPDLARALEFYDRWLPGAMRRITGITGKCMPRCVMLRGPSDWAARPGYR
Ga0207664_119140832	3300025929	Agricultural Soil	YDRWLPGTMRRITGITGRCVPHCVMLRDRGDWAVRPGYR
Ga0207826_10939943	3300027680	Tropical Forest Soil	RALDFYDHWLPSTMRRIADITRTCIPHCVTLRNPGDWAARPGYR
Ga0302229_100090191	3300028879	Palsa	PDLARALEFYDRWLPGTMRRITDITGACLSQCVLLRGPGDRATRPGYR
Ga0311352_113067432	3300029944	Palsa	RWLPGTMRRITGITRTCTPHCVALRGPGDRVDLPGYR
Ga0302325_127933852	3300031234	Palsa	LPGAMRRINGITRKCVLQCVMLDGPGDVVARPGYR
Ga0318516_100225051	3300031543	Soil	PDLARALEFYDRWLPGTMRRITDITRGCLPHCTTLRSPDNWAARPRYR
Ga0318538_107785162	3300031546	Soil	TYAGTGPDLARALEFYDRWLPGTMRRITDITRNCLPQCTTLRSPDDWTARPRYR
Ga0318573_102084241	3300031564	Soil	AGTRPDLDRALEFYDRWLPGTIRRITNITRGCLPQCATLRSPGDWTARPRYR
Ga0307374_104837701	3300031670	Soil	EFHDRWLPGTIRRITDITRACMPQCVMLRYPSERPASPGYR
Ga0318572_100924241	3300031681	Soil	ARALEFHDRWLPGTMRRVNAITGKCVPQCVLLRCPGDRAARPGYR
Ga0310686_1026929264	3300031708	Soil	LARALEFYDRWLPGTMRRITDITRTCMPQCALLRGLGDWAALPRYRR
Ga0318493_106384621	3300031723	Soil	EFYDRWLPGTIRRITNITRGCLPQCATLRSPGDWTARPRYR
Ga0318502_101852191	3300031747	Soil	DLARALEFHDRWLPGTMRRVNAITGKCVPQCVLLRCPGDRAARPGYR
Ga0318494_102218081	3300031751	Soil	DRWLPGTMRRITDITRNCLPQCTTLRSPDDWTARPRYR
Ga0318494_103001291	3300031751	Soil	ARALEFYDRWLPGTIRRITDITRACMPQCVTLHRPDEWAARPPYR
Ga0318554_107024023	3300031765	Soil	ARALEFYDRWLPGTMRRVTDITRTCMPQCATLRSPGDWTARPPYR
Ga0318521_109058361	3300031770	Soil	RWLPGTMRRITGITAKCVPHCVTLRGPSDWAARPGYR
Ga0318523_101449081	3300031798	Soil	ARALEFYDRWLPGTMRRITDITRGCLPHCTTLRSPDNWAARPRYR
Ga0318568_109568421	3300031819	Soil	GGTRPDLARALEFYDRWLPGTMRRITGKCMPQCVMLRSARDWAARPGYR
Ga0318567_106429072	3300031821	Soil	SGTRPDLARALEFYDRWLPGTMRRITGITRECMPQCVMLRGPGDWAARPGYR
Ga0318564_105459331	3300031831	Soil	PDLARALEFYDRWLPGSIRRITDITRGCLPQCATLRSPADWAARPPYR
Ga0318517_105028952	3300031835	Soil	RPDRARALEFYDRWLPGTMRRINAITGKCVPQCVMLRGPGDWAARPGYR
Ga0318511_103237081	3300031845	Soil	PDLARALEFHDRWLPGTMRRITGITGKCMPQCVLLRGPGDWAARPGYC
Ga0306925_102385971	3300031890	Soil	YDRWLPGTMRRINAITGKCVPQCVMLRGPGDWAARPGYR
Ga0306925_103338763	3300031890	Soil	GGARPDLARALEFYDRWLPGTMRRITAITGNCMPHCVMLRDRGDWAARPGYR
Ga0318536_102174064	3300031893	Soil	WLPGTMRRITDITRNCLPQCTTLRSPDDWTARPRYR
Ga0306923_106519131	3300031910	Soil	PDLARALEFYDRWLPGTMRRITDITRTCVPQCALLRGTGDWAVDPRYRRPG
Ga0306923_120625711	3300031910	Soil	AYGGTRPDRARALEFYDRWLPGTMRRINAITGKCVPQCVMLRGPGDWAARPGYR
Ga0306921_115213031	3300031912	Soil	FYDRWLPGAMRRITGITRTCLPQCATLRSPGDWAARPRYR
Ga0310913_102206554	3300031945	Soil	FYDRWLPGTMRRITGITRPCMPHRVTLRGPGEWTARPEYR
Ga0310910_111486132	3300031946	Soil	SRPDLARALEFHDRWLPGTMRRITGITAKCVPQCVMLRGPSDWAARPGYR
Ga0306922_105360284	3300032001	Soil	GTRPDLARALEFYDRWLPGTMRRITDITRNCLPQCTTLRSPDDWTARPRYR
Ga0318562_101001491	3300032008	Soil	WLPGTMRRITGITGKCMPQCVLLRGPGDWAARPGYC
Ga0318507_101545724	3300032025	Soil	DLARALEFYDRWLPGTMRRVTDITRTCMPQCATLRSPGDWTARPPYR
Ga0318507_101666692	3300032025	Soil	YDRWLPGTMRRITDITRGCLPHCTTLRSPDNWAARPRYR
Ga0318570_101708143	3300032054	Soil	PTPAATPTSPRALEFYDRWLPGTMRRITGITRPCMPHRVTLRGPGEWTARPEYR
Ga0318524_106955342	3300032067	Soil	TYTGPGPGPDLARALEFYDRWLPGTMRRITDITRGCLPQCATLRSPDNWAARPRHR
Ga0306924_118018731	3300032076	Soil	RPDLARALEFYDRWLPGTMRRITDITRTCVPQCALLRGTGDWAVDPRYRRPG
Ga0318577_100633363	3300032091	Soil	DRWLPGTMRRITGITGKCMPQCVLLRGPGDWAARPGYC
Ga0311301_116432571	3300032160	Peatlands Soil	GQRPDLARALEFYDRWLPGTMRRISAITGQCMPHCTMLRASGDWATRPGYR
Ga0311301_117458691	3300032160	Peatlands Soil	ARALEFYDRWLPGTMRRITDITRACMPQCVMLRGPGDWNALPRYR
Ga0306920_1037123682	3300032261	Soil	GSRPDLARALEFHDHWLPGTMRRITGITAKCVPQCVMLRGPGDWAARPGYS
Ga0306920_1037427262	3300032261	Soil	RALEFHDRWLPGTMRRITGITAKCVPHCVTLRGPSDWAARPGYR
Ga0335082_113506152	3300032782	Soil	VNTFAVHDRWLPGTMRRITGITGKCMPQCVLLRGPSDRAARPGYR
Ga0335081_122559102	3300032892	Soil	RALEFHDRWLPGTMRRVTGITGQCMPHCVMLRGAGDWGARPGYR
Ga0335083_103426911	3300032954	Soil	WLPGTMRRIAGITGKCMPQCVLLRGPGDRAARPGYR
Ga0335076_105825812	3300032955	Soil	LEFHDRWLPGTMRRITRITRECMPQCVTLRGPSNWAARPGYR
Ga0335073_103647171	3300033134	Soil	HPDLARALEFYDRWLPGTMRRITGITRNCLPQCATLCSPGDWAARPGYR
Ga0335073_118024352	3300033134	Soil	TRPDLARALKFYDRWLPGTMRRIAGLTAQCVPQCVTLRGPGDWAARPRYR
Ga0310914_113877772	3300033289	Soil	DLARALEFYDRWLPGTMRRITDITRTCVPQCALLRGTGDWAVDPRYRRPG
Ga0370483_0041641_2_115	3300034124	Untreated Peat Soil	RWLPGTMHRITGITRTCTPHCVALRGPGDRVDLPGYR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090145

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences