Metagenome / Metatranscriptome Family F090282

Basic Information
Family ID	F090282
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	117 residues
Representative Sequence	VTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDISYAPREDGNYSLAIPVRDSQGSVNGAVRLSIDASIKDT
Number of Associated Samples	86
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	48.04 %
% of genes near scaffold ends (potentially truncated)	94.44 %
% of genes from short scaffolds (< 2000 bps)	87.04 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Most Common Taxonomy
Group	Unclassified (52.778 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.407 % of family members)
Environment Ontology (ENVO)	Unclassified (39.815 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.148 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.91% β-sheet: 21.01% Coil/Unstructured: 55.07%
Feature Viewer

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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF05960	DUF885	28.70
PF07690	MFS_1	9.26
PF01546	Peptidase_M20	3.70
PF00596	Aldolase_II	1.85
PF13561	adh_short_C2	0.93
PF07687	M20_dimer	0.93
PF02661	Fic	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	28.70

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
All Organisms	root	All Organisms	47.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
cellular organisms	root	All Organisms → cellular organisms	47.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	17.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	12.04 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	12.04 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	12.04 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	12.04 %
Novosphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	12.04 %
Novosphingobium fuchskuhlense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → Novosphingobium fuchskuhlense	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573000\|GPBTN7E01CAZK9	Not Available	521	Open in IMG/M
2189573001\|GZR05M101BQZ7J	Not Available	514	Open in IMG/M
3300000904\|JGI12053J12875_102300	Not Available	586	Open in IMG/M
3300001546\|JGI12659J15293_10124067	Not Available	562	Open in IMG/M
3300001661\|JGI12053J15887_10376258	Not Available	684	Open in IMG/M
3300001661\|JGI12053J15887_10393640	Not Available	666	Open in IMG/M
3300004080\|Ga0062385_10496385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	752	Open in IMG/M
3300004080\|Ga0062385_10674737	Not Available	663	Open in IMG/M
3300004082\|Ga0062384_100671155	Not Available	710	Open in IMG/M
3300004082\|Ga0062384_101241763	Not Available	543	Open in IMG/M
3300004091\|Ga0062387_100034635	All Organisms → cellular organisms → Bacteria	2272	Open in IMG/M
3300004091\|Ga0062387_100565944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	808	Open in IMG/M
3300004092\|Ga0062389_100188832	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300005534\|Ga0070735_10449725	Not Available	769	Open in IMG/M
3300005534\|Ga0070735_10910124	Not Available	516	Open in IMG/M
3300005602\|Ga0070762_10267391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1068	Open in IMG/M
3300005610\|Ga0070763_10450935	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300005921\|Ga0070766_10585469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	748	Open in IMG/M
3300006642\|Ga0075521_10387079	Not Available	679	Open in IMG/M
3300009627\|Ga0116109_1106561	Not Available	603	Open in IMG/M
3300009633\|Ga0116129_1088089	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300010343\|Ga0074044_10824371	Not Available	606	Open in IMG/M
3300011106\|Ga0151489_1643159	Not Available	552	Open in IMG/M
3300012924\|Ga0137413_10434564	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300014168\|Ga0181534_10845462	Not Available	544	Open in IMG/M
3300014502\|Ga0182021_11646251	Not Available	773	Open in IMG/M
3300014657\|Ga0181522_10892752	Not Available	548	Open in IMG/M
3300014838\|Ga0182030_10158968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2841	Open in IMG/M
3300015264\|Ga0137403_10708932	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300020580\|Ga0210403_10469555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1024	Open in IMG/M
3300020580\|Ga0210403_10683634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	823	Open in IMG/M
3300020580\|Ga0210403_11362783	Not Available	539	Open in IMG/M
3300020580\|Ga0210403_11454230	Not Available	517	Open in IMG/M
3300020581\|Ga0210399_11028846	Not Available	662	Open in IMG/M
3300021168\|Ga0210406_10070777	All Organisms → cellular organisms → Bacteria	3000	Open in IMG/M
3300021168\|Ga0210406_10641586	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300021170\|Ga0210400_11604829	Not Available	513	Open in IMG/M
3300021171\|Ga0210405_10433337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1034	Open in IMG/M
3300021178\|Ga0210408_10459904	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300021404\|Ga0210389_10908608	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300021405\|Ga0210387_10069441	All Organisms → cellular organisms → Bacteria	2879	Open in IMG/M
3300021405\|Ga0210387_10453558	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300021405\|Ga0210387_10613316	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300021406\|Ga0210386_11506167	Not Available	561	Open in IMG/M
3300021407\|Ga0210383_10388080	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300021407\|Ga0210383_11158519	Not Available	651	Open in IMG/M
3300021407\|Ga0210383_11261548	Not Available	619	Open in IMG/M
3300021420\|Ga0210394_10251751	All Organisms → cellular organisms → Bacteria → Proteobacteria	1546	Open in IMG/M
3300021474\|Ga0210390_10638609	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300021475\|Ga0210392_10121048	All Organisms → cellular organisms → Bacteria	1751	Open in IMG/M
3300021475\|Ga0210392_10563343	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300021475\|Ga0210392_10650382	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300021475\|Ga0210392_10801293	Not Available	703	Open in IMG/M
3300021478\|Ga0210402_10002076	All Organisms → cellular organisms → Bacteria → Proteobacteria	19855	Open in IMG/M
3300021478\|Ga0210402_10349428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1372	Open in IMG/M
3300021559\|Ga0210409_10693118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	889	Open in IMG/M
3300022512\|Ga0242676_1032668	Not Available	592	Open in IMG/M
3300024227\|Ga0228598_1036321	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300025544\|Ga0208078_1046664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	926	Open in IMG/M
3300025627\|Ga0208220_1045884	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300026220\|Ga0209855_1079572	Not Available	552	Open in IMG/M
3300026294\|Ga0209839_10100758	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300026467\|Ga0257154_1079311	Not Available	523	Open in IMG/M
3300027030\|Ga0208240_1040424	Not Available	525	Open in IMG/M
3300027117\|Ga0209732_1014813	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300027313\|Ga0207780_1091256	Not Available	509	Open in IMG/M
3300027884\|Ga0209275_10181961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1129	Open in IMG/M
3300027889\|Ga0209380_10195749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1187	Open in IMG/M
3300028806\|Ga0302221_10279906	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300028906\|Ga0308309_11805402	Not Available	517	Open in IMG/M
3300029636\|Ga0222749_10666485	Not Available	569	Open in IMG/M
3300029907\|Ga0311329_10502858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	823	Open in IMG/M
3300029915\|Ga0311358_10134468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → Novosphingobium fuchskuhlense	2412	Open in IMG/M
3300029945\|Ga0311330_11205842	Not Available	548	Open in IMG/M
3300029954\|Ga0311331_10365410	Not Available	1487	Open in IMG/M
3300030058\|Ga0302179_10454653	Not Available	563	Open in IMG/M
3300030524\|Ga0311357_11760892	Not Available	517	Open in IMG/M
3300030580\|Ga0311355_10900131	Not Available	804	Open in IMG/M
3300030617\|Ga0311356_10076364	All Organisms → cellular organisms → Bacteria	3541	Open in IMG/M
3300030688\|Ga0311345_10256925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1699	Open in IMG/M
3300030739\|Ga0302311_10328396	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300030739\|Ga0302311_10641179	Not Available	709	Open in IMG/M
3300030759\|Ga0265745_1003897	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300030760\|Ga0265762_1150980	Not Available	553	Open in IMG/M
3300030815\|Ga0265746_1059461	Not Available	547	Open in IMG/M
3300030862\|Ga0265753_1008857	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300031018\|Ga0265773_1035107	Not Available	555	Open in IMG/M
3300031028\|Ga0302180_10333925	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300031057\|Ga0170834_108644160	Not Available	613	Open in IMG/M
3300031122\|Ga0170822_11847875	Not Available	513	Open in IMG/M
3300031128\|Ga0170823_16808884	Not Available	629	Open in IMG/M
3300031446\|Ga0170820_17158740	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300031525\|Ga0302326_10598816	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300031708\|Ga0310686_112870900	Not Available	501	Open in IMG/M
3300031715\|Ga0307476_10379918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1042	Open in IMG/M
3300031715\|Ga0307476_10696226	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300031718\|Ga0307474_11256821	Not Available	585	Open in IMG/M
3300031754\|Ga0307475_10171152	All Organisms → cellular organisms → Bacteria	1731	Open in IMG/M
3300031754\|Ga0307475_11275535	Not Available	570	Open in IMG/M
3300031837\|Ga0302315_10666445	Not Available	549	Open in IMG/M
3300034163\|Ga0370515_0342511	Not Available	631	Open in IMG/M
3300034199\|Ga0370514_131052	Not Available	644	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.89%
Aquatic	Environmental → Aquatic	10.19%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.07%
Peat	Environmental → Terrestrial → Peat	14.81%
Freshwater	Environmental → Aquatic → Freshwater	10.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.81%
Loam	Environmental → Terrestrial → Soil → Loam	12.04%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.11%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.33%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.70%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.41%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	10.19%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.63%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.70%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.78%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.85%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.93%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.93%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.93%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.93%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000904	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300009627	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_10	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300026220	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027313	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030759	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031018	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N55_09081560	2189573000	Grass Soil	MPPRLLRAKRLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDVSYAPREDGNYSLAIPVRDAQGSVNGAVRLSID
FD2_04364320	2189573001	Grass Soil	VKIRLKGISEAASSKTLEALAQVIRALAPEVCSVSFHDFAADALWLSEDFLLPEDHQLVEDSISGRVGGNAEITYGAHDGPRYAVAIPVRDPKGGVNGAVRLSIDSQIIDGRAAESLEKR
JGI12053J12875_1023002	3300000904	Forest Soil	MVGILQNLSPVSGAASNKMFDALAQVIRALAPEVSAVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSSDTGGNLDATYGSREDGHYAMAIPVRDVNGAVN
JGI12659J15293_101240671	3300001546	Forest Soil	VTTKLTYAAEAASSKTLEALAQVIKALAPEVSSVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSSDPGGNLDASYAPREDGSYTLAIPVRDAAGAINGAVRLSVDAGIKDTRTEETLQQKLAPVFVCL
JGI12053J15887_103762582	3300001661	Forest Soil	VTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSRGNLDVSYAPREDGNYSLAIPVRDAQGSVNGAVRLSIDASIKDTRTDESL
JGI12053J15887_103936402	3300001661	Forest Soil	MVGILQNLSPVSGAASNKMFDALAQVIRALAPEVSAVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSSDTGGNLDATYGSREDGHYAMAIPVRDVNGAVNGAVRLSVDSNIVD
Ga0062385_104963851	3300004080	Bog Forest Soil	MPRVTTNLTYAAETASNKTLEALAQVIRALAPEVSAVSFHDFAADTLWLSEDFLLPEDHQLVEDSLTNTKLGDTEATYAAREDGQYSVAIPIRDSSSSISGAVRLSIDPAIVDTRTSEPL
Ga0062385_106747371	3300004080	Bog Forest Soil	MNLSYADEAASSKTLEALAQVIRALAPEVCAVSFHDFAADTLWLSEDFLVPEDHQLVEDSLSGDQGGNLDVTYGARQDGRYSVSIPVRDADGAINGAVRLSIDSRIVDTRTCEPLEQRLAPVFVCLAAEFERRQALPPHPKE
Ga0062384_1006711552	3300004082	Bog Forest Soil	VTTNLRFDAETASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSIDTGGNLEMTYAAREDGNYSLAIPVRDAGGAING
Ga0062384_1012417631	3300004082	Bog Forest Soil	VTTNLTYAAEAASGKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFLLPEDFQLVEDSLSSDSAGNLDSSYAPREDGNYSLAIPVRDSHGAVNGAVRLSINGSVRDMR
Ga0062387_1000346351	3300004091	Bog Forest Soil	VTTNLRFDAETASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSIDTGGNLEMTYAAREDGNYSLAIPVRDAGGAINGAVRLSIDAKITDSRTAEPLEKRLAPVFVCLAEEFERRKAMPA
Ga0062387_1005659441	3300004091	Bog Forest Soil	MPRVTTNLTYAAETASNKTLEALAQVIRALAPEVSAVSFHDFAADTLWLSEDFLLPEDHQLVEDSLTNTKLGDTEATYAAREDGQYSVAIPIRDSSSSISGAVRLSIDPAIVDTRTSEPLEERLAPVFSCLAAEFERRQ
Ga0062389_1001888321	3300004092	Bog Forest Soil	VTTNLRFDAETASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSIDTGGNLEMTYAAREDGNYSLAIPVRDAGGAINGAVRLSIDAKITDS
Ga0070735_104497252	3300005534	Surface Soil	VTTNLTYAAEAASGRTLEALAQVIRALAPEVSDVSFHDFAADTLWMSEDFLLPEDYQLVEDSLSSDSAGNLDASYAQREDGNYSLAIPVR
Ga0070735_109101241	3300005534	Surface Soil	VTTHLTYAAEAASGRTLEALAQVIRALAPEVSGVSFHDFAADTLWLSEDFLLPEDHQLVEDSLCSDSGGNLEVSYAPREDGNYSLAIPVRDSQGAINGAV
Ga0070762_102673911	3300005602	Soil	VTTNLTYAAEAASSKTLEALAQVIRALAPEVSAVSFHDFAADTLWLSEDFLLPEDHQLVEDSLTNTKVGDMEATYAAREGGQYSVSIPVRDASGAINGAVRLSIDS
Ga0070763_104509351	3300005610	Soil	VTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDISYAPREDGNYSLAIPVR
Ga0070766_105854692	3300005921	Soil	VSTNLTYAAEAASSKTFEALAQVIRALAPEVCAVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSSGKLGDFEASYAAREDGLYSVAIPVRDSSGAINGAIRLSIDSGVANTRTSELLEQRLEPVFVCLAAEFERRQA
Ga0075521_103870791	3300006642	Arctic Peat Soil	VTIRLNDAAEAASSKTLAALAQVIRALAPEVCSASFHDLNAETLWLSEDFLPPEDHQLVEEALSGHSEVTNGSHDGDRYAAVILVRDSQG
Ga0116109_11065611	3300009627	Peatland	MTENASNKMFDALAQVIRALAPEVSAVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSSDSGNLDASYGIREDGNYAMAIPVR
Ga0116129_10880892	3300009633	Peatland	VTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDISYAPREDGNYSIAIPVRDSQG
Ga0074044_108243711	3300010343	Bog Forest Soil	VTTNLTYAAEAASSQTLEALAQVIRALAPEVSAVSFHDFAADTLWLSEDFLLPEDHQLVEDSLTNTKVGDMEATYAAREDGHYSVSIPVRDSSGAINGAVRL
Ga0151489_16431591	3300011106	Soil	VQDVKIRLKGISEAASSKTLEALAQVIRALAPEVCSVSFHDFAADALWLSEDFLLPEDHQLVEDSISGRVGGNSEITYGAHDGARYAVAIPVRDPKGGVNGAVRLSIDSQIIDG
Ga0137413_104345642	3300012924	Vadose Zone Soil	VTTNLTFAAEAASGRTLEALAQVIRALAPEVTSVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSSDSGGNLDVSYAPREDGNYSLAIPVRDSQGAIN
Ga0181534_108454621	3300014168	Bog	VPDVTIKLSDTAEAASSKTLEALAQVIRALAPEVCSVSFHDFAGDTLWLSEDFLLPEDHQLVEDSLSGSAEGSTAEGGQEITYGERDGSRYAVAIPVRDSYGVVNGAVRLSVDSQIVDSQIVDARTAEP
Ga0182021_116462511	3300014502	Fen	MAIRLSDTAEATSGDTLAALAQVIRVLAPEVCSVSFHNFAADTLWLSEDLLLPEDCRVVEEALSGHGEAGSEMTFGANDGGRYAVAIPVRDMHGGVNGAV
Ga0181522_108927521	3300014657	Bog	VPDVTIRLSDTAQAASSKTLAALAQVIRALAPEVCGVSFHDFAADTLWLSEDFLLPEDHQLVEDTLTDTLKGISEMTIGSQDGARYAVAIPVRDTHGGVNG
Ga0182030_101589681	3300014838	Bog	LSDSAEAASSKTLAALAQVIRALAPEVCSVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSDTADGTSVMTFGAQDGARYAVAIPVRDSHGGVNGAVRLSIDSQVM
Ga0137403_107089322	3300015264	Vadose Zone Soil	VTTNLTYAAEAASGRTLEALAQVIRALAPEVTSVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSSDSGGNLDVSYAPREDGNYSLAIPVRDSQGAI
Ga0210403_104695552	3300020580	Soil	VTTNLTYAAEAASSKTLEALAQVIRALAPEVSAVSFHDFAADTLWLSEDFLLPEDHQLVEDSLTKTQVGDMEATYAAREDGHYSVSIPVRDSSGAINGAVRLSIDSGIVDTRTSEPLEQRLTPV
Ga0210403_106836341	3300020580	Soil	VTTNLTYAAEAASSKTLEALAQVIRALAPEVSAVSFHDFAADTLWLSEDFLLPEDHQLVEDSLTNTKVGDMEATYAAREGGQYSVSIPVRDASGAINGAVRLSIDSGVTDTRTG
Ga0210403_113627831	3300020580	Soil	MSDAAEASSGQILAALAQVIRAMAPEVSGVSFHDAAGDALWLSEDFLPPEDHQLVQEALSGNAGGSFEMTLGADQDGGYAVAIPVRG
Ga0210403_114542301	3300020580	Soil	VSTNLTYAAEAASSKTLEALAQVIRALAPEVCAVSFHDFAADALWLSEDFLRPEDHQLVEDSLSSGKVGDIEASYAARDDGLYSVAIPVRGSNGAIN
Ga0210399_110288462	3300020581	Soil	MAASKITHWVLRVTTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWLSEDFLLPEDYQLVEDSLSSDSGGNLDVSFAPREDGNYSLAIPVRDSQGAVNGAVRLSIDASIKDT
Ga0210404_103033982	3300021088	Soil	MPSRLSPPYHGGIEITLWVLRVTTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWLSEDFLLPEDYQLVEDSLSSDSGGNLDVSFAPREDGNYSLAIPVRDSQGSINGAVRLSIDASVKDTRTDETLEQKLAPVFVCLSAEFERRQGFPL
Ga0210406_100707771	3300021168	Soil	VTTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWLSEDFLLPEDYQLVEDSLSSDSRGNLDNSFAPREDGNYSLAIPVRDSQGS
Ga0210406_106415861	3300021168	Soil	VTTNLTYAAEAASSKTLEALAQVIRALAPEVTGVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSSDSGGNLDASYAPREDGNYTIAIPVRDTNGALNGAVRLSIDAGIKDTRTDETLEQKLAPVFVCLSAEFERRL
Ga0210400_116048291	3300021170	Soil	VTIRLSDAAEAASSRTLAALAQVIRALAPEVSGVSFHDAAGDALWLSEDFLPPEDHQLVQEALSGNAGGNFEMTLGADQDDGYAVAIPVRDSNGSVNGAVRLSIDSGIVDARTAEPLQSR
Ga0210405_104333371	3300021171	Soil	VSTNLTYAAEAASSKTLEALAQVIRALAPEVCAVSFHDFAADALWLSEDFLRPEDHQLVEDSLSSGKVGDIEASYAARDDGLYSVAIPVRGSNGAINGAVRLSIDSAIVDT
Ga0210408_104599041	3300021178	Soil	MAASKITLWVLRVTTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWLSEDFLLPEDYQLVEDSLSSDSGGNLDVSYAPREDGNYSLAIPVRDSQGSVNGAVRLSIDASIKDTRTDETLEQKLAPVFVCLSAEFERRQGFP
Ga0210388_107558801	3300021181	Soil	MPPLLFGPYHGARSNQDRCPVTIRLSDAAEAASSQTLAALAQVIRALAPEVSGVSFHDAAGDALWLSEDFLPPEDHQLVQEALSGNAGGSFEMTLGADQDDGYAVAIPVRDSNGCVNGAVRLSIDSGIVDARTAEPLQSRLTPLWIC
Ga0210393_107058002	3300021401	Soil	VTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDISYAPREDGNYSLAIPVRDSQGSVNGAVRLSIDASIKDTRTDESLEQKLAPVFVCLSAEFERRQGFPLLISEDT
Ga0210393_116315791	3300021401	Soil	VTTNLTYAAEAASSKTLEALAQVIRALAPEVTGVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSSDSGGNLDASYAPREDGNYTIAIPVRDTNGALNGAVRLSIDAGIKDTRTDETLEQKLAPVFVCLSAEFERRQGFPLLIS
Ga0210389_109086081	3300021404	Soil	MTASNIHSWVLSVTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSRGNLDASYAPREDGNYSL
Ga0210387_100694411	3300021405	Soil	VTTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWLSEDFLLPEDYQLVEDSLSSDSRGNLDNSFAPREDGNYSLAIPVRDSQGSINGAVRLSID
Ga0210387_104535582	3300021405	Soil	MTASNIHSWVLSVTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSRGNLDASYAPREDGNYSLAIPVRDAQGSVNGAVRLSIDASIKDTRTDES
Ga0210387_106133161	3300021405	Soil	MAASKITHWVLRVTTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWLSEDFLLPEDYQLVEDSLSSDSGGNLDVSFAPREDGNYSLAIPVRDSQGAVNGAVRLSIDASIKDTRTDETLEQKLAPV
Ga0210386_115061671	3300021406	Soil	VTIRLSDTAEAASSKTLEALAQVIRALAPEVCSVSFHDFAADALWLSEDFLLPEDHRLVEDSLSGTLEGKSEMMFGVQEGTRYTVAIPVRDSQGAVNGAVRLSIDSQIVDGRAAEPL
Ga0210383_103880801	3300021407	Soil	MTASNIHSWVLSVTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDVSYAPRGEGNYSLAIPVRDAQGSVNGAVRLSIDASIKDTRTDESLEQKLAPVFVCLSA
Ga0210383_111585191	3300021407	Soil	MTASRITVRCVVTSLRYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLEVSYAPREDGNYSLAIPVRDSQGSVNGAVRLSIDASIKDTR
Ga0210383_112615481	3300021407	Soil	MLARISDPYHCRIENYIRVPRVTTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDVSYAPREDGNYSLAIPVRDAQGSVNGAVRLSIDASIKDTRTDETLEQKLAPVFVCLSAEFERRQGF
Ga0210394_102517511	3300021420	Soil	VKIRLSDTAEAASSKTLEALAQVIRALAPEVCSISFHDFAADALWLSEDFLLPEDHQLVEDSLSGTLEEEMMFGAQEGTRYTVAIPVHDSNG
Ga0210394_115547301	3300021420	Soil	VTTNLTYAAEAASSKTLEALAQVIRALAPEVTGVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSSDSGGNLDASYAPREDGNYTIAIPVRDTNGALNGAVRLSIDAGIKDARTDETLEQKLAPVFVCLSAEFERRQGFPLLI
Ga0210390_106386091	3300021474	Soil	VTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSDDFILPEDYQLVEDSLSSDPRGNLDVSYAPRGEGNYSLAIPVRDAQGSVNGAVRLSIDASIKDTRTDESLEQ
Ga0210392_101210482	3300021475	Soil	VTTNLTYAAEAASSKTLEALAQVIRALAPEVTGVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSSDSGGNLDASYAPREDGNYTIAIPVRDTNGALNGAVRLSIDAGIKDTRTDETLEQKLA
Ga0210392_105633431	3300021475	Soil	MTASNIHSWVLSVTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSRGNLDASYAPREDGNYSLAIPVRDAQGSVNGAVRLSIDASVKDTRTDESLEQKLAPVFVC
Ga0210392_106503821	3300021475	Soil	MAASKITHWVLRVTTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWLSEDFLLPEDYQLVEDSLMSDSGGNLDVSFAPREDGNYSLAIPVRDSQGSINGAVRLS
Ga0210392_108012931	3300021475	Soil	VTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDPRGNLDISYAPREDGNYSLAIPVRDAQGSVNGAVRLSIDASIKDTRTDESLEQKLAPVFVCLSAEFER
Ga0210402_100020761	3300021478	Soil	VTTNLTYAAEAASSKTLEALAQVIRALAPEVSAVSFHDFAADTLWLSEDFLLPEDHQLVEDSLTNTKVGDMEATYAAREGGQYSVSIPVRDASGAINGAVRLSIDSGVTDTRTGEPLEQRLAPVFTCLAA
Ga0210402_103494281	3300021478	Soil	MPPLLFGPYHGARSNQDRCPVTIRLSDAAEAASSQTLAALAQVIRALAPEVSGVSFHDAAGDALWLSEDFLPPEDHQLVQEALSGNAGGSFEMTLGADQDDGYAVAIPVRDSNGCVNGAVRLSIDSGIV
Ga0210409_106931182	3300021559	Soil	VSTNLTYAAEAASSKTFEALAQVIRALAPEVCAVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSSGKLGDFEASYAAREDGLYSVAIPVRDSSGAINGAIRLSIDS
Ga0242676_10326681	3300022512	Soil	VTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLEVSYAPREDGNYSLAIPVRDSQGSVNGAVRLSIDASIKDTRTD
Ga0228598_10363212	3300024227	Rhizosphere	MTASNIHSWVLSVTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSDDFILPEDYQLVEDSLSSDPRGNLDVSYAPRGEGNYSLAIPVRDAQGSVNGAVRLSIDASIKDTRTDESLEQKLAPVFVCLSAEFER
Ga0208078_10466641	3300025544	Arctic Peat Soil	VTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDVSYAPREDGNYSLA
Ga0208220_10458842	3300025627	Arctic Peat Soil	VTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDVSYAPREDGNYSLAIPVRDAQGSVNGAVR
Ga0209855_10795721	3300026220	Permafrost Soil	VTTHLADAAEAASGKTLEALAQVIRALAPEVTGVSFHDFAADTLWLSEDFLLPEDHRLVEDSISSDSAGNLEVADAPREDGTYSVAIPVRDAHGAINGAVRLSIDASVRDTRT
Ga0209839_101007582	3300026294	Soil	VTTRLTYAAEAASSKTLEALAQVIQALAPEVSGVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSSDSGGNLDVSYAPREDGNYSLAIPVRDSQGSINGAVRLSIDATVNDTRTDETLEQKLAPVFVCLSAEFERRQGF
Ga0257154_10793111	3300026467	Soil	VTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSKGNLDASYAPREDGNYSLAIPVRDAQGSVNGAVRLSID
Ga0208240_10404241	3300027030	Forest Soil	VTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSDDFILPEDYQLVEDSLSSDPRGNLDVSYAPRGEGNYSLAIPVRDAQGSVNGAVRLSIDASIKDTRTDESLEEKLAPVFVCLSAEFER
Ga0209732_10148132	3300027117	Forest Soil	VTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDISYAPREDGNYSLAIPVRDSQGSVNGAVRLSIDATIKDTRTDESLEQKLAPVFVCLSAEFE
Ga0207780_10912561	3300027313	Tropical Forest Soil	VTTQLTNSAESASRKTLEALAQVIKALAPEVSSISFHDFAADTLWLSEDFLLPEDHQLVEDSLSNDTGGDLEISYATRDDGKYSIAIPVRDAHGAVNGAVRMSIDAN
Ga0209275_101819612	3300027884	Soil	VTTNLTYAAEAASSKTLEALAQVIRALAPEVSAVSFHDFAADTLWLSEDFLLPEDHQLVEDSLTNTKVGDMEATYAAREGGQYSVSIPVRDSSGAINGAVRLSIDSGIVDTRTSEPLEQRLTPVF
Ga0209380_101957492	3300027889	Soil	VSTNLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSRGNLDASYAPREDGNYSLAIPVRDAQGSVNGAVRLSIDASIKDTRTDESLEQKLAPVFVCLSAEFERRQGF
Ga0302221_102799061	3300028806	Palsa	MTASNIHSRVLNVTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDVSYAPREDGNYSLAIPVRDAQGSVNGAVRLSIDASIKDTRTDESLEQKLAPVF
Ga0308309_118054021	3300028906	Soil	MAASKITHWVLRVTTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWLSEDFLLPEDYQLVEDSLSSDSGGNLDVSFAPREDGNYSLAIPVRDSQGAVNGAVRLSIDASI
Ga0222749_106664851	3300029636	Soil	MAASKITLWVLRVTTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWLSEDFLLPEDYQLVEDSLSSDSRGNLDNSFAPREDGNYSLAIPVRDSQGSINGAVRLSIDASVKDTRTDETLEQKLAPVF
Ga0311329_105028581	3300029907	Bog	VTIKLSDTAEAASSKILAALAQVIRALAPEVCSVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSGTGEGSLEMTYGAHEGAR
Ga0311358_101344681	3300029915	Bog	VTIKLSDTAEAASSKILAALAQVIRALAPEVCSVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSGTGEGSLEMTYGAHEGARYAV
Ga0311330_112058421	3300029945	Bog	MGPYKFIPWWHVTTNLTYAAEAASSKTLEALAQVIRALAPEVCAVSFHDFAADTLWLSEDFLLPEDYQLVEDSLSSDSGGNLDATYGAREDGHYSVAIPVRDTQGAVNGAVRLN
Ga0311331_103654102	3300029954	Bog	VTIKLSDTAEAASSKILAALAQVIRALAPEVCSVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSGTGEGSLEMTYGAHEGARYAVAIPVHDSHGGVHGAVRLSIDS
Ga0302179_104546531	3300030058	Palsa	MTASNIHSRVLNVTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDVSYAPREDGNYSLAIPVRDAQGSVNGAVRLSIDASIKDTRTDESLEQKLAPVFVCLSAEF
Ga0311357_117608922	3300030524	Palsa	VTIRLSDSAEAASSKTLAALAQVIRALAPEVCSVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSGTAQGSSEMIYGVQDGGRYAVAIPVRDAHGG
Ga0311355_109001312	3300030580	Palsa	VTIRLSDSAEAASSKTLAALAQVIRALAPEVCSVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSGTAQGSSEMIYGVQDGGRYAVAIPVRDAHGGVNGAVRLSIDSQVADARTAEPLELRLA
Ga0311356_100763641	3300030617	Palsa	MTASNIHSRVLNVTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDVSYAPREDGNYSLAIPVRDA
Ga0311345_102569252	3300030688	Bog	VPHVTIKLSDTAEAASSKILAALAQVIRALAPEVCSVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSGTGEGSLEMTYGAHEGARYA
Ga0302311_103283961	3300030739	Palsa	MTASNIHSRVLNVTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDVSYAPREDGNYSLAIPVRDAQGSVNGAVRLSIDASIKDTRTDESLEQKLAPVFVCLSA
Ga0302311_106411792	3300030739	Palsa	VTIRLSDSAEAASSKTLAALAQVIRALAPEVCSVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSGTAQGSSEMIYGVQDGGRYAVAIPVRDAHGGVNGAVRLSIDSQVAD
Ga0265745_10038972	3300030759	Soil	VTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDISYAPREDGNYSLAIPVRDSQGSVNGAVRLSIDASIKD
Ga0265762_11509801	3300030760	Soil	MGADVKMRLSDTAEAASSKTLEALAQVIRALAPEVCSVSFHDFAADALWLSEDFLLPEDHLLVEDSLTGTSGGKTEMIFGAHDGARYAVAIPVRDSHGA
Ga0265746_10594611	3300030815	Soil	VTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDVSYAPREDGNYSLAIPVRDSQGSVNGAVRLSIDATIKDTRTDESLEQKLAPVFVCLSAEFERRQ
Ga0265753_10088572	3300030862	Soil	MRASNIHSRVLSVTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDVSYAPRGEGNYSLAIPVRDAQGSVNGAVRLSIDASIKDTRTDESLEQKLA
Ga0265773_10351071	3300031018	Soil	MRASNIHSRVLSVTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDVSYAPRGEGNYSLAIPVRDAQGSVNGAVRLSID
Ga0302308_106238471	3300031027	Palsa	MTASNIHSRVLNVTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDVSYAPREDGNYSLAIPVRDAQGSVNGAVRLSIDASIKDTRTDESLEQKLAPVFVCLSAEFERRQGFPLLISEDP
Ga0302180_103339251	3300031028	Palsa	MTASNIHSRVLNVTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDVSYAPREDGNYSLAIPVRDAQGSVNGAVRLSIDASIKDTRTDESLEQKLAPVFVCLS
Ga0170834_1086441601	3300031057	Forest Soil	MSSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSSDSGNMDASFAPREDGSYSLAIPVRDGQGAINGAVRLSIDPSVKDTRTDETLEQKLAPVFVCLSAEFERRQTF
Ga0170822_118478751	3300031122	Forest Soil	VTTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWLSEDFLLPEDYQLVEDSLSSDSRGNLDNSYAPREDGNYSLAIPVRDSQGSINGAVRLSIDASVKDTRTDETLEQKLAPVFVCLSAEFERRQGNKK
Ga0170823_168088841	3300031128	Forest Soil	MTASNIHSWVLSVTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSKGNLDVSYAPREDGNYSLAIPVRDAQGSVNGAVRLSIDASIKDTRTDESLEEKLAPVFVCLSA
Ga0170820_171587401	3300031446	Forest Soil	VTTNLTFAAEAASSRTLEALAEVIRALAPEVSGVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSSESGNLDVSYAPREDGNYSVAIPVRDSQGAINGAVR
Ga0302326_105988161	3300031525	Palsa	VTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDISYAPREDGNYSLAIPVRDSQGSVNGAVRLSIDASIKDT
Ga0310686_1128709001	3300031708	Soil	VTIKLSDTAEAASSKTLAALAQVIRALAPEVCGVSFHDFAADTLWLSEDFLLPEDHQLVEDSLIGTLKGISEMTFGAHDGAHYAVAIPVRDSH
Ga0307476_103799182	3300031715	Hardwood Forest Soil	MKIRLSDAAEAASSRTLAALAQVIRALAPEVCGVSFHDFAADTLWLSEDFLPPEDHQLVEDSLSGTSDGSAMTFGAHDGGRYAVAIPVRGSHG
Ga0307476_106962261	3300031715	Hardwood Forest Soil	MAVRIDTWVPPVTTNLTYAAEAASSKTLEALAQVIRALAPEVTGVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSSDPSGNLDATYATREDGNYSIAIPVRDTQGAVNGAVRLSIDAG
Ga0307474_112568211	3300031718	Hardwood Forest Soil	VTIKLTDTAEAASSKTLAALAQVIRALAPEVCSVSFHDLAAETLWLSEDFLTPEDHQLVEESLYGTSTGLEMSYGADDGERYSVAIPVRDSRACVNGAVRLGIDSIPA
Ga0307475_101711522	3300031754	Hardwood Forest Soil	MPSRLSPPYHGGIEITLWVLRVTTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWLSEDFLLPEDYQLVEDSLLSDSGGNLDVSFAPREDGNYSLAIPVRDSQGSINGAVRLSIDASIKDTRT
Ga0307475_112755351	3300031754	Hardwood Forest Soil	VTIKLTDTAEAASSKTLAALAQVIRALAPEVCSVSFHDLAAETLWLSEDFLTPEDHQLVEESLYGTSTGLEMSYGADDGERYSVAIPVRDSRACVNGAVRLGIDSIPAGAGAGESLQSRLAPLLVC
Ga0302315_106664451	3300031837	Palsa	MTASNIHSRVLNVTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDVSYAPREDGNYSLAIPVRDAQGSVNGAVRLSIDASIKDTRTDESLEQKL
Ga0370515_0342511_1_273	3300034163	Untreated Peat Soil	LSDTAEAASSKTFAALAQVIRALAPEVCGVSFHDFAADTLWLSEDFLLPEDHQLVEDSLSGTAEGSAEITYGAQDGTRYSVAIPVRDSNGG
Ga0370514_131052_1_453	3300034199	Untreated Peat Soil	MTASNIHSRVLNVTSLTYAAEAASSKTLEALAQVIRALAPEVSGVSFHDFAADTLWMSEDFILPEDYQLVEDSLSSDSGGNLDVSYAPREDGNYSLAIPVRDAQGSVNGAVRLSIDASIKDTRTDESLEQKLAPVFVCLSAEFERRQGFPL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090282

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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