Metagenome / Metatranscriptome Family F090306

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090306
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	95 residues
Representative Sequence	MWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEVEFFEVWNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVMTHGPETKLKFVWL
Number of Associated Samples	72
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	55.56 %
% of genes near scaffold ends (potentially truncated)	47.22 %
% of genes from short scaffolds (< 2000 bps)	97.22 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (99.074 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (32.407 % of family members)
Environment Ontology (ENVO)	Unclassified (74.074 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (78.704 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.59% β-sheet: 0.00% Coil/Unstructured: 50.41%
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Predicted 3D Structure

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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00665	rve	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.93
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.93
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.93
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.07 %
All Organisms	root	All Organisms	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.07 %
cellular organisms	root	All Organisms → cellular organisms	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.07 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.07 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.07 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.07 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.07 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000176\|TB03JUN2009E_c031211	Not Available	736	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1039999	Not Available	1820	Open in IMG/M
3300000736\|JGI12547J11936_1009442	Not Available	2562	Open in IMG/M
3300004777\|Ga0007827_10066986	Not Available	821	Open in IMG/M
3300004777\|Ga0007827_10095940	Not Available	668	Open in IMG/M
3300004806\|Ga0007854_10215585	Not Available	814	Open in IMG/M
3300004806\|Ga0007854_10450063	Not Available	522	Open in IMG/M
3300004807\|Ga0007809_10221064	Not Available	542	Open in IMG/M
3300005069\|Ga0071350_1055392	Not Available	1133	Open in IMG/M
3300005069\|Ga0071350_1116199	Not Available	849	Open in IMG/M
3300005069\|Ga0071350_1372008	Not Available	510	Open in IMG/M
3300005525\|Ga0068877_10334833	Not Available	867	Open in IMG/M
3300005525\|Ga0068877_10706145	Not Available	539	Open in IMG/M
3300005527\|Ga0068876_10074740	Not Available	2038	Open in IMG/M
3300005527\|Ga0068876_10310546	Not Available	893	Open in IMG/M
3300005528\|Ga0068872_10493616	Not Available	657	Open in IMG/M
3300006071\|Ga0007876_1088683	Not Available	806	Open in IMG/M
3300006103\|Ga0007813_1090433	Not Available	594	Open in IMG/M
3300006105\|Ga0007819_1079412	Not Available	668	Open in IMG/M
3300006106\|Ga0007833_1049225	Not Available	773	Open in IMG/M
3300006112\|Ga0007857_1098324	Not Available	530	Open in IMG/M
3300006113\|Ga0007858_1034499	Not Available	1117	Open in IMG/M
3300006113\|Ga0007858_1121524	Not Available	531	Open in IMG/M
3300006115\|Ga0007816_1086838	Not Available	691	Open in IMG/M
3300006116\|Ga0007807_1066085	Not Available	690	Open in IMG/M
3300006118\|Ga0007859_1091537	Not Available	609	Open in IMG/M
3300006122\|Ga0007837_1038587	Not Available	813	Open in IMG/M
3300006126\|Ga0007855_1027446	Not Available	1262	Open in IMG/M
3300006126\|Ga0007855_1101378	Not Available	599	Open in IMG/M
3300006128\|Ga0007828_1122472	Not Available	536	Open in IMG/M
3300006639\|Ga0079301_1201684	Not Available	571	Open in IMG/M
3300008105\|Ga0114338_1297874	Not Available	508	Open in IMG/M
3300008109\|Ga0114342_1048210	Not Available	1209	Open in IMG/M
3300008109\|Ga0114342_1060769	Not Available	1027	Open in IMG/M
3300008109\|Ga0114342_1068246	Not Available	951	Open in IMG/M
3300008109\|Ga0114342_1071641	Not Available	921	Open in IMG/M
3300008109\|Ga0114342_1096899	Not Available	759	Open in IMG/M
3300008109\|Ga0114342_1106817	Not Available	715	Open in IMG/M
3300008109\|Ga0114342_1117488	Not Available	671	Open in IMG/M
3300008112\|Ga0114345_1018476	Not Available	1839	Open in IMG/M
3300008112\|Ga0114345_1044403	Not Available	1299	Open in IMG/M
3300008112\|Ga0114345_1062811	Not Available	1131	Open in IMG/M
3300008112\|Ga0114345_1099231	Not Available	937	Open in IMG/M
3300008112\|Ga0114345_1281136	Not Available	559	Open in IMG/M
3300008112\|Ga0114345_1319980	Not Available	515	Open in IMG/M
3300008118\|Ga0114352_1019443	Not Available	1433	Open in IMG/M
3300008118\|Ga0114352_1047127	Not Available	889	Open in IMG/M
3300008118\|Ga0114352_1098890	Not Available	607	Open in IMG/M
3300009187\|Ga0114972_10339248	Not Available	880	Open in IMG/M
3300009187\|Ga0114972_10484752	Not Available	702	Open in IMG/M
3300012695\|Ga0157577_1161968	Not Available	554	Open in IMG/M
3300012698\|Ga0157570_1145905	Not Available	1008	Open in IMG/M
3300012698\|Ga0157570_1164257	Not Available	730	Open in IMG/M
3300012700\|Ga0157576_1099651	Not Available	1253	Open in IMG/M
3300012701\|Ga0157562_1121556	Not Available	547	Open in IMG/M
3300012703\|Ga0157572_1117151	Not Available	641	Open in IMG/M
3300012704\|Ga0157574_1096356	Not Available	1939	Open in IMG/M
3300012749\|Ga0157566_1035721	Not Available	624	Open in IMG/M
3300012750\|Ga0157568_1011543	Not Available	1146	Open in IMG/M
3300013004\|Ga0164293_10625088	Not Available	697	Open in IMG/M
3300013005\|Ga0164292_10248703	Not Available	1239	Open in IMG/M
3300013005\|Ga0164292_10979473	Not Available	528	Open in IMG/M
3300013093\|Ga0164296_1139514	Not Available	976	Open in IMG/M
3300013093\|Ga0164296_1306170	Not Available	594	Open in IMG/M
3300013094\|Ga0164297_10068729	Not Available	1609	Open in IMG/M
3300013094\|Ga0164297_10206552	Not Available	762	Open in IMG/M
3300013094\|Ga0164297_10222501	Not Available	728	Open in IMG/M
3300020574\|Ga0208221_1038480	Not Available	911	Open in IMG/M
3300020677\|Ga0214169_104766	Not Available	844	Open in IMG/M
3300020677\|Ga0214169_105793	Not Available	760	Open in IMG/M
3300020689\|Ga0214210_1000718	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	5820	Open in IMG/M
3300020731\|Ga0214170_1053434	Not Available	588	Open in IMG/M
3300021119\|Ga0214204_1018492	Not Available	639	Open in IMG/M
3300021138\|Ga0214164_1066319	Not Available	741	Open in IMG/M
3300021139\|Ga0214166_1033595	Not Available	1196	Open in IMG/M
3300021142\|Ga0214192_1115776	Not Available	718	Open in IMG/M
3300021142\|Ga0214192_1129382	Not Available	662	Open in IMG/M
3300024239\|Ga0247724_1061963	Not Available	563	Open in IMG/M
3300025385\|Ga0207956_1006641	Not Available	1907	Open in IMG/M
3300025413\|Ga0208614_1070068	Not Available	506	Open in IMG/M
3300025450\|Ga0208744_1075554	Not Available	656	Open in IMG/M
3300025470\|Ga0208389_1015966	Not Available	1760	Open in IMG/M
3300025782\|Ga0208867_1019170	Not Available	1048	Open in IMG/M
3300025785\|Ga0208498_1016263	Not Available	1331	Open in IMG/M
3300027720\|Ga0209617_10140887	Not Available	953	Open in IMG/M
3300027720\|Ga0209617_10388929	Not Available	510	Open in IMG/M
3300027793\|Ga0209972_10101948	Not Available	1439	Open in IMG/M
3300028025\|Ga0247723_1053570	Not Available	1143	Open in IMG/M
3300032117\|Ga0316218_1335569	Not Available	503	Open in IMG/M
3300033816\|Ga0334980_0190027	Not Available	828	Open in IMG/M
3300033980\|Ga0334981_0195891	Not Available	943	Open in IMG/M
3300033980\|Ga0334981_0200978	Not Available	928	Open in IMG/M
3300033993\|Ga0334994_0461810	Not Available	599	Open in IMG/M
3300034012\|Ga0334986_0290652	Not Available	870	Open in IMG/M
3300034012\|Ga0334986_0444254	Not Available	649	Open in IMG/M
3300034012\|Ga0334986_0447046	Not Available	646	Open in IMG/M
3300034023\|Ga0335021_0293947	Not Available	874	Open in IMG/M
3300034073\|Ga0310130_0297063	Not Available	514	Open in IMG/M
3300034082\|Ga0335020_0344281	Not Available	725	Open in IMG/M
3300034092\|Ga0335010_0338879	Not Available	847	Open in IMG/M
3300034106\|Ga0335036_0193840	Not Available	1414	Open in IMG/M
3300034106\|Ga0335036_0427552	Not Available	844	Open in IMG/M
3300034108\|Ga0335050_0320099	Not Available	730	Open in IMG/M
3300034108\|Ga0335050_0396626	Not Available	622	Open in IMG/M
3300034118\|Ga0335053_0511158	Not Available	707	Open in IMG/M
3300034283\|Ga0335007_0264899	Not Available	1149	Open in IMG/M
3300034284\|Ga0335013_0395906	Not Available	851	Open in IMG/M
3300034284\|Ga0335013_0687646	Not Available	585	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.30%
Terrestrial	Environmental → Terrestrial	3.70%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	96.30%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	3.70%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	50.00%
Lentic	Environmental → Aquatic → Freshwater → Lentic	46.30%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	3.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	50.00%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	31.48%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	13.89%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	3.70%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	32.41%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	25.93%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	15.74%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	11.11%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	5.56%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	2.78%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.85%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.85%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.93%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.93%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300000439	Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300000736	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011	Environmental	Open in IMG/M
3300004777	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Jul07	Environmental	Open in IMG/M
3300004806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M
3300005069	Metagenomes from Harmful Algal Blooms in Lake Erie, HABS-E2014-0024	Environmental	Open in IMG/M
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006103	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09	Environmental	Open in IMG/M
3300006105	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE07Jul09	Environmental	Open in IMG/M
3300006106	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul07	Environmental	Open in IMG/M
3300006112	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08	Environmental	Open in IMG/M
3300006113	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Aug08	Environmental	Open in IMG/M
3300006115	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09	Environmental	Open in IMG/M
3300006116	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE12Aug09	Environmental	Open in IMG/M
3300006118	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul07	Environmental	Open in IMG/M
3300006122	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE31Jul07	Environmental	Open in IMG/M
3300006126	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH01Aug08	Environmental	Open in IMG/M
3300006128	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07	Environmental	Open in IMG/M
3300006639	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11	Environmental	Open in IMG/M
3300008105	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, sample E2014-0046-100-LTR	Environmental	Open in IMG/M
3300008109	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-53-LTR	Environmental	Open in IMG/M
3300008112	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-100-LTR	Environmental	Open in IMG/M
3300008118	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-100-LTR	Environmental	Open in IMG/M
3300009187	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG	Environmental	Open in IMG/M
3300012695	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES081 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012698	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES071 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012700	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES079 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012701	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES061 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012703	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA- GEODES074 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012704	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES077 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012749	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES066 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012750	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES069 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013094	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaG	Environmental	Open in IMG/M
3300020574	Freshwater microbial communities from Lake Mendota, WI - 26JUN2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020677	Freshwater microbial communities from Trout Bog Lake, WI - 13JUN2007 epilimnion	Environmental	Open in IMG/M
3300020689	Freshwater microbial communities from Trout Bog Lake, WI - 03AUG2009 epilimnion	Environmental	Open in IMG/M
3300020731	Freshwater microbial communities from Trout Bog Lake, WI - 27JUN2007 epilimnion	Environmental	Open in IMG/M
3300021119	Freshwater microbial communities from Trout Bog Lake, WI - 23JUN2009 epilimnion	Environmental	Open in IMG/M
3300021138	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300021139	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300021142	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 epilimnion	Environmental	Open in IMG/M
3300024239	Subsurface sediment microbial communities from gas well in Oklahoma, United States - OK STACK MC-2-E	Environmental	Open in IMG/M
3300025385	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025413	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025450	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025470	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025782	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE05Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025785	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE12Aug09 (SPAdes)	Environmental	Open in IMG/M
3300027720	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027793	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300032117	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033980	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME09Aug2015-rr0007	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034023	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Oct2016-rr0090	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034108	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Jun2014-rr0157	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009E_0312112	3300000176	Freshwater	MWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEIEFLEVWNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVMTHGPETKLKFVGL*
TBL_comb48_EPIDRAFT_10399992	3300000439	Freshwater	CQRRRCYGKRSYVPLAALSFRHMWKTCQKVLEKVEDLXEVRFVEFKSAIESVPVVFADFEVEFFEVWNAVIHTLNHLVLEFEKSRVVERDPYMAGESRGRVMTHRTETELKFVWL*
JGI12547J11936_10094423	3300000736	Freshwater And Sediment	MWKTCQKVLEKVEDLLEVRFVEFKSAIESVPVVFAEFEVEFFEVWNAVIHTLNHLVLEFEKSRVVERDPYMAGESRGRVMTHRTETELKFVWL*
Ga0007827_100669862	3300004777	Freshwater	LTALSFGHMRKACQEILEKFEDLLDVRFVKFEGAVDSFSVVFVEMKVELIKVRNAAIHTLDHLVLEFEKSRVVERDPNVAGESRSRVMSHWPETKLKLVGL*
Ga0007827_100959401	3300004777	Freshwater	EVRFVKFKSAIESVPVVFAEFEVEFFEVWNAAIHTLNHLVLEFEQSLVIKRDPYMAGESRGRVVTHGPETKLKLCGLRKNGVDQNGLFCLRI*
Ga0007854_102155852	3300004806	Freshwater	FVEFEGAVENFSVVFVDFEMETIEVWNAAIHTLGHLSLKFKKSGVVERDPDMTCEGRSRVVTHGPKAKLEFVRL*
Ga0007854_104500631	3300004806	Freshwater	FRHMRKAGQEILEEFEDLFEVRFVQFEGAVESKSVVFIEVKVEAIKVWNAAIHTLDHLILELEKSRVVEGNPNVTGEGGSRVVTHRPEAKLKFVRLSENRVDENWPF*
Ga0007809_102210641	3300004807	Freshwater	YVPLAALSFRHMWKTCQKVLEKVEDLLEVRFVEFKSAIESVSVVFADFEVEFFEVWNAVIHTLNHLILEFEKSRVVERDPYMAGESGGRVMTHWTETKLKFVWL*
Ga0071350_10553922	3300005069	Freshwater	LSFWHMWKACQKVLEKVEDLFEVRFVKFKSAIECVPVVFAEFEVEFFEVWSAAIHTLNHLVLEFEKSRVIERDPYMAGEGRGRVMTHGTKMKLKLCGLGKNGVDQNGLF*
Ga0071350_11161991	3300005069	Freshwater	MRKAGQEILEEFEDLLEVGFVKFEGAVESKPVVFIEVEIEAIEVWNAAIHTLDHLVLEFEKSRVVEGNPNVTGESGSRVVTHRPETKLKFVRLSEN*
Ga0071350_13720082	3300005069	Freshwater	VLEKVEDLLEVRFVKFKSAIESVPVVFADFEVEFFEVWNTVIHTFNHLVLELEKSRVVERDPYMAGESRGCVMTHRTETELKLFGCEKIESMRIGCFG*
Ga0068877_103348331	3300005525	Freshwater Lake	HVPLTALAFRHMRKACQEILEEFENLFEVGFVKFEGAVESFSVVFIEVKVEAIKVWNAAIHTLDHLILELEKSRVVEGNPNVTGEGGSRVVTHRPEAKLKFVRLSENRVNENWPF*
Ga0068877_107061451	3300005525	Freshwater Lake	METIEVWNAAIHTLGHLSLKFKKSGVVERDPDMTCEGRSHVVTHGPKTKLEFVRL*
Ga0068876_100747402	3300005527	Freshwater Lake	MRKACQEILEKFEDLLDVRFVKFEGAVDSFSVVFVEMKVELIKVRNAAIHTLDHLVLEFEKSRVVERDPNVAGESRSRVMTHWPETKLKLVGL*
Ga0068876_103105461	3300005527	Freshwater Lake	MWKACQKVLEEVEDLLEVRFVKFKSAIESVPVVFAEFEVEFFEVWNAAIHTLNHLVLEFEKSRVIERDPYMAGESRGRVMTHGPETKLKLCGLGKNGVDQNGLF*
Ga0068872_104936162	3300005528	Freshwater Lake	MWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEIEFLEVWNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVMTHGPETKLKFVG
Ga0007876_10886832	3300006071	Freshwater	LTALSFGHMRKACQEILEKFEDLLDVRFVKFEGAVDSFSIVFVEMKVELIKVRNAAIHTLDHLVLEFEKSRVVERDPNVAGESRSRVMTHWPETKLKLVGL*
Ga0007813_10904331	3300006103	Freshwater	GKGRHVPLTALSFRHMRKACQEIVEKSEDLLDVRFVKFEGAVDSFSVVFVEMKVESIKVWNAAIHTLDHLVLEFEKSRVVERDPNVAGESRSRVMTHWPETKLKLVGL*
Ga0007819_10794121	3300006105	Freshwater	LTAFAFRHVRKAGQEILEKFENLLEVGFVEFEGAVENFSVVFIDFEMEAIEVWNAAIHTLGHLSLKFKKSGVVERDPDMTCEGRSRVVTHGPKTKLEFVRL*
Ga0007833_10492252	3300006106	Freshwater	FSVVFVDFEMETIEVWNAAIHTLGHLSLKFKKSGVVERDPDMTCEGQSRVVTHGPKTKLEFVRL*
Ga0007857_10983241	3300006112	Freshwater	MWETCQKVLEKVEDLLEVRFVELKSAIESVPVVFAEFEVEFFEVWNAVIHTLNHLVLEFEKSRVVERDPYMAGESRGRVMTHGPETKLKLSGLRENGVDQNGLFCLRI*
Ga0007858_10344992	3300006113	Freshwater	MWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEIEFLEVWNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVMTH
Ga0007858_11215241	3300006113	Freshwater	RSYVPLAALSFRHMWKTCQKVLEKVEDLFEVRFVEFKSAIESVPVVFADFEVEFFEVWNAVIHTLNHLVLEFEKSRVVERDPYMAGESRGRVMTHRTETELKFVWL*
Ga0007816_10868381	3300006115	Freshwater	LTALSFGHMRKACQEILEKFEDLLDVRFVKFEGAVDSFSVVFVEMKVELIKVRNAAIHTLDHLVLEFEKSRVVERDPNVAGESRSRVMAHWPETKLKLVGL*
Ga0007807_10660851	3300006116	Freshwater	LAALSFRHMRKAGQEILEKFEDLFEVGFVKFEGAVESFSVVFIEVKVEAIKVWNAAIHTLDHLILELEKSRVVEGNPNVTGEGRSRVVTHWPEAKLKFVRLSEN*
Ga0007859_10915371	3300006118	Freshwater	VVGGKCQRGRSDGKGRHVPLTALSFGHMRKACQEILEKFEDLFDVRFVKFEGAVDSFSVVFVEMKVELIKVRNAAIHTLDHLVLEFEKSRVVERDPNVAGESRSRVMTHWPETKLKLVGL
Ga0007837_10385871	3300006122	Freshwater	DVPLAALSFRHMWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEIEFLEVWNAVIHTLNHLVLEFEKSRVVERDPYMAGESRGRVMTHGPETKLKFVGL*
Ga0007855_10274462	3300006126	Freshwater	QLRDLDCVVGGKCQRGCCYGKGSHVPLTALSFRHMRKACQEIVEKSEDLLDVRFVKFEGAVDSFSVVFVEMKVESIKVWNAAIHTLDHLVLEFEKSRVVERDPNVAGESRSRVMTHWPETKLKLVGL*
Ga0007855_11013782	3300006126	Freshwater	VPLAALSFRHMWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEVEFFEVWNAVIHTLNHLVLEFEKSRVVERDPYMAGESRGRVMTHRTETELKFVWL*
Ga0007828_11224721	3300006128	Freshwater	LTAFAFRHVRKAGQEILEKFENLLEVGFVEFEGAVENFSVVFVDFEMETIEVWNAAIHTLGHLSLKFKKSGVVERDPDMTCEGRSRVVTHGPKTKLEFVRL*
Ga0079301_12016842	3300006639	Deep Subsurface	MWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEVEFFEVWNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVMTHRTETELKFVWL*
Ga0114338_12978741	3300008105	Freshwater, Plankton	MRKAGQEILEEFEDLFEVRFVQFEGAVESKSVVFIEVKVEAIKVWNAAIHTLDHLILKFEKSRVVKWNPNVTGEGRSRVVTHRPETKLKFVRLSEN*
Ga0114342_10482102	3300008109	Freshwater, Plankton	KFENLLEVGFVKFEGAVESFSVVFVDFEMETIEVWNAAIHTLGHLSLELKKSGVVERDPDMTCESRSRVVTHGPKTKLELVRL*
Ga0114342_10607692	3300008109	Freshwater, Plankton	KFENLLEVGFVEFEGAVENFSVVFVDFEMETIEVWNAAIHTLGHLSLKFKKSGVVERDPDMTCEGRSRVVTHGLKTKLEFVRL*
Ga0114342_10682461	3300008109	Freshwater, Plankton	MWETCQKVLEKVEDLLEVRFVELKSAIESVPVVFAEFEVEFFEVWNAVIHTLNHLVLEFEKSGVVERDPYMAGESRGRVMTHRTETELKFVWL*
Ga0114342_10716412	3300008109	Freshwater, Plankton	MRKACQEIFEKFEYLLEVRFVKFKGAVESFSVVFVEVKVESIEVWNAAIHTLNHLVLEFEKSRVIERDPYMAGESRSRVVTHGPETKLKLGRLRKNGVDQNGLF*
Ga0114342_10968991	3300008109	Freshwater, Plankton	MRKAGQEILEEFEDLFEVRFVQFEGADESKSVVFIEVKVEAIKVWNAAIHMLDHLILEFEKSRVVEWNPNVTGEGRSRVVTHRPETKL
Ga0114342_11068171	3300008109	Freshwater, Plankton	MWKTCQKILEKVEDLLEVRFVKFKSAIESVPVVFADFEVEFFEVWNTVIHTLNHLVLELEKSRVVERDPYMAGESRG
Ga0114342_11174881	3300008109	Freshwater, Plankton	MWKTCQKVLEKVEDLLEVRFVKFKSAIESGPVVVAEFEIEFLEVWNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVM
Ga0114345_10184762	3300008112	Freshwater, Plankton	MRKVGQEILEEFENLFEVRFVQFESAVESKSVVFIEVKVEAIKVWNAAIHTLDHLILEFEKSRVVEWNPNVTGEGRSRVVTHRPETKLKFVRLSEN*
Ga0114345_10444032	3300008112	Freshwater, Plankton	GERGHVPLAALAFRHIRKACQEILEEFENLFEVGFVKFEGAVESFSVVFIEVKVEAIKVWNAAIHTLDHLILELEKSRVVEGNPNMTGESGSRVVTHWPEAKLKFVRLSENRVDENWPF*
Ga0114345_10628112	3300008112	Freshwater, Plankton	MRKAGQEIPEEFEDLFEVGFVQFEGAVECFSVVFIEVKVESIEVSNAAIHTFDHLILELKKSRVVKRNPDMTGESRSCVVTHGPKTKLEFVRLRKDRVDEYRFLGLNV*
Ga0114345_10992312	3300008112	Freshwater, Plankton	GRGYGKRGHVPLAALSFRHMWKACQKVLEEVEDLLEVGFVKFKSAIESVPVVFAEFEVEFFEVWNAAIHTLNHLVLEFEKSRVIERDPYMAGESRGRVMTHGPETKLKLCGLGKNGVDQNGLF*
Ga0114345_12811362	3300008112	Freshwater, Plankton	MRKAGQEILEEFENLSEVGFVKFESAVESFSVVFVEVKVEAIKVWNAAIHTLDHLILELEKSRVVEGNPNVTGEGGSRVVTHRPEAKLKFVRLSEN*
Ga0114345_13199802	3300008112	Freshwater, Plankton	MWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEIEFLEVWNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVMTHG
Ga0114352_10194433	3300008118	Freshwater, Plankton	MWKACQKVLEEVEDLLEVRFVKFKSAIESGPVVVAEFEIEFLEVWNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVMTHGPETKLKFVWL*
Ga0114352_10471271	3300008118	Freshwater, Plankton	MRKACQEILEKFEDLLEVGFVKFESAVESFSVVFIEVKVESIEVWNAAIHTLCHLSLEVKKSGVVERDPDMTGESRSRVVTHGPETKLELVRL*
Ga0114352_10988901	3300008118	Freshwater, Plankton	HMWKTCQKVLEKVEDLLEVRFVEFKSAIESVPVVFADFEVEFFEVWNAVIHTLNHLVLEFEKSRVVERDPYMAGESRGRVMTHRTETELKFVWL*
Ga0114972_103392482	3300009187	Freshwater Lake	MWETCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEVEFFEVWNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVMTHWTETKLKFVWL*
Ga0114972_104847522	3300009187	Freshwater Lake	VRKAGQEILEKFENLLEVGFVKFEGAVESFPVVFVEVKVESIEVWNAAIHTLNHLVLEFEKSRVIERDPYMAGESRGRVMTHRTETELKFVWL*
Ga0157577_11619681	3300012695	Freshwater	MWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEVEFFEVWNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVMTHGPETKLKFVWL*
Ga0157570_11459051	3300012698	Freshwater	FVEFEGAVENFSVVFVDFEMETIEVWNAAIHTLGHLSLKFKKSGVVKRDPDMTCEGRSRVVTHGPKTKLEFFRL*
Ga0157570_11642571	3300012698	Freshwater	MWETCQKVLEKVEDLLEVRFVEFKSAIESVPVVFADFEVEFFEVWNAVIHTLNHLVLEFEQSRVIERDPHMAGESRGRVVTHGPETELKLCGLRENG
Ga0157576_10996512	3300012700	Freshwater	MWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEIEFLEVWNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVMTHWPETKLKLGGLGKNGVDQNGLF*
Ga0157562_11215562	3300012701	Freshwater	MWETCQKVLEKVEDLLEVRFVKFKSAIESGPVVVAEFEIEFLEVWNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVMTHGPETKLKLVGL*
Ga0157572_11171512	3300012703	Freshwater	MWETCQKVLEKVEDLLEVRFVEFKSAIESVPVVFAEFEIEFLEVWNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVMTHGPETKLKFVGL*
Ga0157574_10963562	3300012704	Freshwater	MWETCQKVLEKVEDLLEVRFVELKSAIESVPVVFAEFEVEFFEVWNAVIHTLNHLVLEFEKSRVVERDPYMAGESRGRVMTHRTETELKFVWL*
Ga0157566_10357211	3300012749	Freshwater	MWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVVADFEVEFFEVRNAVIHTLDHLVLEFEKSRVVKGDPYMAGESRGRVMTHGPEVKLKLVGL*
Ga0157568_10115432	3300012750	Freshwater	MWKTCQKVLEKVEDLLEVRFVKFKSAIESGPVVVAEFEMEFLKVWNAVVHTLNHFFLELEKSRVIERDPYMAGESRGRVMTHGPETKLKLVGL*
Ga0164293_106250882	3300013004	Freshwater	MWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFTEFEVEFLEVWNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVMTHGPETKLKFVWL*
Ga0164292_102487031	3300013005	Freshwater	ENFSVVFVDFEMETIEVWNAAIHTLGHLSLELKKSGVVERDPDMTGESRSRIVTHGPKTKL*
Ga0164292_109794731	3300013005	Freshwater	VEDLFEVRFVKFKSAIESVPVVFTEFEVEFFEVRNAVIHLLNHLVLEFEKSRVVERDSYVAGESRSRVMTHGPETKLKLVGL*
Ga0164296_11395142	3300013093	Freshwater	MWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEIEFLEVWNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVMTHGPETKLKFVWL*
Ga0164296_13061701	3300013093	Freshwater	MWKTCQKVLEKVEDLFEVRFVEFKSAIESVSVVFADFEVEFFEVWNAVIHTLNHLILEFEKSRVVERDPYMAGESRGRVMTHR
Ga0164297_100687292	3300013094	Freshwater	MRKAGQEILEEFENLFEVGFVKFEGAVESFSVVFIEVKVEAIKVWNAAIHTLDHLILELEKSRVVEGNPNMTGESGSRVVTHWPEAKLKFVRLSENRVDENWPF*
Ga0164297_102065521	3300013094	Freshwater	MRKAGQEILEKFEDLLEVGFVKFEGAVESFSVVFVEVKVESIEVWNAAIHALSHLILELKKSRVVEGNPDMTGESRSRVVTHGPETKLELVRL*
Ga0164297_102225012	3300013094	Freshwater	MWETCQKVLEKVEDLLEVRFVELKSAIESVPVVFAEFEVEFFEVWNAVIHTLNHLVLEFEKSGVVERDPYMAGESRGCVMTHRTETELKFVWL*
Ga0208221_10384801	3300020574	Freshwater	SFRHMWKTCQKVLEKVEDLLEVRFVEFKSAIESVPVVFADFEVEFFEVWNAVIHTLNHLVLEFEKSRVVERDPYMAGESRGRVMTHRTETELKFVWL
Ga0214169_1047662	3300020677	Freshwater	QEILEKFENLLEVGFVEFEGAVENFSVVFVDFEMETIEVWNAAIHTLGHLSLKFKKSGVVERDPDMTCEGRSRVVTHGPKTKLEFVRL
Ga0214169_1057932	3300020677	Freshwater	LTALSFGHMRKACQEILEKFEDLLDVRFVKFEGAVDSFSVVFVEMKVELIKVRNAAIHTLDHLVLEFEKSRVVERDPNVAGESRSRVMSHWPETKLKLVGL
Ga0214210_10007183	3300020689	Freshwater	MWETCQKVLEKVEDLLEVRFVEFKSAIESVPVVFAEFEVEFFEVWNAVIHTLNHLVLEFEKSRVVERDPYMAGESRGRVMTHGPETKLKFVWL
Ga0214170_10534341	3300020731	Freshwater	LTAFAFRHVRKAGQEILEKFENLLEVGFVEFEGAVENFSVVFVDFEMETIEVWNAAIHTLGHLSLKFKKSGVVEWDPDMTCEGRSRVVTHGPKTKLEFFRL
Ga0214204_10184921	3300021119	Freshwater	QKVLEKVEDLLEVRFVEFKSAIESVPVVFADFEVEFFEVWNAVIHTLNHLVLEFEKSRVVERDPYMAGESRGRVMTHRTETELKFVWL
Ga0214164_10663191	3300021138	Freshwater	LRDLDCVVGGQCERGRCCDEGSNIPLTSLAFRHMRKAGQEILEEFEDLFEVGFVKFEGAVEGSPVVLVKVEIEAIEVWNAAIHTLDHLVLEFEKSRVVKWNPYVTGERRSRVVTHLPETKLKFVRL
Ga0214166_10335952	3300021139	Freshwater	MWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEVEFFEVWNAVIHTLNHLVLEFEQSGVIERDPYMAGESRGRVMTHGPETKLKLVGL
Ga0214192_11157761	3300021142	Freshwater	AALSFRHMWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEIEFLEVWNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVMTHGPETKLKFVGL
Ga0214192_11293822	3300021142	Freshwater	EILEKFENLLEVGFVEFEGAVENFSVVFVDFEMETIEVWNAAIHTLGHLSLKFKKSGVVERDPDMTCEGQSRVVTHGPKTKLEFFRL
Ga0247724_10619631	3300024239	Deep Subsurface Sediment	RGRCYGKRSYVPLAALSFRHMWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEIEFLEVWNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVMTHGPETKLKFVWL
Ga0207956_10066412	3300025385	Freshwater	DLLEVRFVEFKSAIESVPVVFADFEVEFFEVWNAVIHTLNHLILEFEKSRVVERDPYMAGESRGRVMTHRTETELKFVWL
Ga0208614_10700681	3300025413	Freshwater	MRKACQEIVEKSEDLLDVRFVKFEGAVDSFSVVFVEMKVELIKVRNAAIHTLDHLVLEFEKSRVVERDPNVAGESRSRVMSHWPETKLKLVGL
Ga0208744_10755542	3300025450	Freshwater	VEKSEDLLDVRFVKFEGAVDSFSVVFVEMKVESIKVWNAAIHTLDHLVLEFEKSRVVERDPNVAGESRSRVMTHWPETKLKLVGL
Ga0208389_10159662	3300025470	Freshwater	MWKTCQKVLEKVEDLLEVRFVELKSAIESVPVVFAEFEVEFFEVWNAVIHTLNHLVLEFEKSRVVERDPYMAGESRGRVMTHRTETELKFVWL
Ga0208867_10191702	3300025782	Freshwater	MWKTCQKVLEKVEDLLEVRFVEFKSAIESVPVVFADFEVEFFEVWNAVIHTLNHLVLEFEKSRVVEGDPYMAGESKGRVMTHWPEMKLKLVGL
Ga0208498_10162632	3300025785	Freshwater	MWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEVEFFEVWNAVIHTLNHLVLEFEKSRVVERDPYMAGESRGRVMTHRTETELKFV
Ga0209617_101408872	3300027720	Freshwater And Sediment	LEKFENLLEVGFVEFEGAVENFSVVFVDFEMETIEVWNAAIHTLGHLSLKFKKSGVVERDPDMTCEGRSRVVTHGPKTKLEFVRL
Ga0209617_103889291	3300027720	Freshwater And Sediment	GGKCQRGRCYGKRSHIPLTALSFRHMKACQEIFEKFEDLLEVRFVKFEGAVESFSVVFVEVKVEFIEVWNAAIHALGHLILELKKSRVVKWNPDMTGESRSRVVTHGPETKLELVRL
Ga0209972_101019482	3300027793	Freshwater Lake	EDLLEVRFVEFKSAIESVSVVFADFEVEFFEVWNAVIHTLNHLVLEFEKSRVVERDPYMAGESRGRVMTHRTETELKFVWL
Ga0247723_10535702	3300028025	Deep Subsurface Sediment	LTALSFGHMRKACQEILEKFEDLLDVRFVKFKGAVDSFSVVFVEMKVELIKVRNAAIHTLDHLVLEFEKSRVVERDPNVAGESRSRVMAHWPETKLKLVGL
Ga0316218_13355691	3300032117	Freshwater	LLEVRFVEFKSAIESVPVVFADFEVEFFEVWNAVIHTLNHLVLEFEKSRVVERDPYMAGESRGRVMTHRTETELKFVWL
Ga0334980_0190027_18_299	3300033816	Freshwater	MWKAGQEVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEVEFFEVWNAVIHTLNHLVLEFEKSRVVERDPYMAGESRGRVMTHRTETELKFVWL
Ga0334981_0195891_635_934	3300033980	Freshwater	VFAFRHVRKAGQEILEKFENLLEVGFVEFEGAVENFSVVFVDFEMETIEVWNAAIHTLGHLSLKFKKSGVVERDPDMTCEGRSRVVTHGPKTKLEFFRL
Ga0334981_0200978_117_398	3300033980	Freshwater	MWETCQKVLEKVEDLLEVRFVEFKSAIESVPVVFAEFEVEFFEVWNAVIHTLNHLVLEFEKDGVVERDPYMAGESRGRVMTHRTETELKFVWL
Ga0334994_0461810_118_399	3300033993	Freshwater	MRKAGQEILEKFEDLLEVGFVKFEGAVESFSVVFVEVKVESIEVWNAAIHTLNHLVLEFEKSRVIERDPYMAGESRGRVMTHGPETKLKLVGL
Ga0334986_0290652_338_619	3300034012	Freshwater	MWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEIEFLEVWNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVMTHGPETKLKLVGL
Ga0334986_0444254_373_648	3300034012	Freshwater	MWETCQKVLEKVEDLLEVRFVELKSAIESVPVVFAEFEVEFFEVWNAVIHTLNHLVLEFEKSGVVERDPYMAGESRGRVMTHRTETELKFVW
Ga0334986_0447046_21_326	3300034012	Freshwater	LTAFAFRHVRKAGQEILEKFENLLEVGFVEFEGAVENFSVVFVDFEMETIEVWNAAIHTLGHLSLKFKKSGVVERDPDMTCEGRSRVVTHGPKTKLEFVRL
Ga0335021_0293947_560_841	3300034023	Freshwater	MWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEVEFFEVRNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVMTHRTKTELKFVWL
Ga0310130_0297063_126_407	3300034073	Fracking Water	MREAGQKILEKFEDLSDIRFVKFEGAVDSFPVVFAEIKVESIKVWNAAIHTLDHLVLEVEKSGVVEWDPNVAGESRSRVVTHWPETKLKSVGL
Ga0335020_0344281_64_345	3300034082	Freshwater	MWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEIEFLEVWNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVMTHGPETKLKFVGL
Ga0335010_0338879_47_328	3300034092	Freshwater	MWETCQKVLEKVEDLLEVRFVEFKSAIESVPVVFADFEVEFFEVWNAVFHTLNHLVLEFEKSRVVERDPYMAGESRGRVMTHGPETKLKLGRL
Ga0335036_0193840_595_876	3300034106	Freshwater	MWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAEFEVEFFEVWNAVIHTLNHLVLEFEKSGVVERDPYMAGESRGRVMTHGPETKLKFVGL
Ga0335036_0427552_625_843	3300034106	Freshwater	EFEGAVENFSVVFVDFEMETIEVWNAAIHTLGHLSLKFKKSGVVERDPDMTCEGRSRVVTHGPKTKLEFFRL
Ga0335050_0320099_1_312	3300034108	Freshwater	MWKTCQKVLEKVEDLLEVRFVKFKSAIESVPVVFAELEVEFFEVWNAAIHTLNHLVLEFEKSRVIERDPYMAGESRGRVMTHGPETKLKLGGLGKNGVVQNGLF
Ga0335050_0396626_8_247	3300034108	Freshwater	LLEVGFVEFEGAVESFSVVFFDFEMETIEVWNAAIHTLGHLSLKFKKSGVVEQDPDMTCEGRSRVVTHGPKMKLEFVRL
Ga0335053_0511158_418_699	3300034118	Freshwater	MRKAGQEILEKFKDLLEVGFVKFEGAVESFSVVFVEVKVEFIEVWNAAIHALSHLILELKKSRVVKWNPDMTGESRSRVVTHGPETKLELVRL
Ga0335007_0264899_748_1029	3300034283	Freshwater	MWETCQKVLEKVEDLLEVRFVEFKSAIESVSVVFADFEVEFFEVWNAVIHTLNHLILEFEKSRVVERDPYMAGESGGRVMTHWTETELKFVWL
Ga0335013_0395906_507_788	3300034284	Freshwater	MWKTCQKVLEKVEDLLEVRFVEFKSAIESVSVVFADFEVEFFEVWNAVIHTLNHLVLEFEKSRVVERDPYMAGESRGRVMTHRTETELKFVWL
Ga0335013_0687646_239_520	3300034284	Freshwater	MWKTCQEVLEKVEDLLEVRFVKFKSAIEIGPVVVAEFEIEFLEVWNAVIHTLNHLVLELEKSRVVERDPYMAGESRGRVMTHGPETKLKLVGL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090306

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences