Metagenome / Metatranscriptome Family F090320

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F090320
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	89 residues
Representative Sequence	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVFPFLLMMAGYKARGKITEIIKVRRAKTRKAPDE
Number of Associated Samples	89
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.56 %
% of genes near scaffold ends (potentially truncated)	29.63 %
% of genes from short scaffolds (< 2000 bps)	89.81 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (62.963 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.815 % of family members)
Environment Ontology (ENVO)	Unclassified (27.778 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.852 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.44% β-sheet: 0.00% Coil/Unstructured: 39.56%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF04335	VirB8	3.70
PF13641	Glyco_tranf_2_3	0.93
PF03466	LysR_substrate	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG3736	Type IV secretory pathway, component VirB8	Intracellular trafficking, secretion, and vesicular transport [U]	3.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.96 %
Unclassified	root	N/A	37.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.96 %
Unclassified	root	N/A	37.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.96 %
Unclassified	root	N/A	37.04 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.04 %
Unclassified	root	N/A	37.04 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	50.00 %
Unclassified	root	N/A	37.04 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.41 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.00 %
Unclassified	root	N/A	37.04 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	5.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.00 %
Unclassified	root	N/A	37.04 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	4.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.00 %
Unclassified	root	N/A	37.04 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	4.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.00 %
Unclassified	root	N/A	37.04 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	4.63 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10857857	Not Available	599	Open in IMG/M
3300005541\|Ga0070733_10095328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1894	Open in IMG/M
3300005541\|Ga0070733_11101378	Not Available	533	Open in IMG/M
3300005591\|Ga0070761_10793813	Not Available	596	Open in IMG/M
3300005602\|Ga0070762_10101654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1665	Open in IMG/M
3300005712\|Ga0070764_10245653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300005712\|Ga0070764_10803861	Not Available	585	Open in IMG/M
3300005921\|Ga0070766_11243566	Not Available	516	Open in IMG/M
3300006638\|Ga0075522_10037059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2911	Open in IMG/M
3300009623\|Ga0116133_1178636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300009628\|Ga0116125_1045655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1109	Open in IMG/M
3300009635\|Ga0116117_1013227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2110	Open in IMG/M
3300009638\|Ga0116113_1019048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1503	Open in IMG/M
3300009644\|Ga0116121_1140790	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300009759\|Ga0116101_1051837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	885	Open in IMG/M
3300009759\|Ga0116101_1058191	Not Available	843	Open in IMG/M
3300010341\|Ga0074045_10496513	All Organisms → cellular organisms → Bacteria → Acidobacteria	784	Open in IMG/M
3300013105\|Ga0157369_11536874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300014162\|Ga0181538_10394875	All Organisms → cellular organisms → Bacteria → Acidobacteria	738	Open in IMG/M
3300014164\|Ga0181532_10553189	Not Available	627	Open in IMG/M
3300014167\|Ga0181528_10039906	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2633	Open in IMG/M
3300014168\|Ga0181534_10015001	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	3986	Open in IMG/M
3300014492\|Ga0182013_10193186	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1232	Open in IMG/M
3300014501\|Ga0182024_10469359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1608	Open in IMG/M
3300014501\|Ga0182024_11120679	Not Available	927	Open in IMG/M
3300014501\|Ga0182024_12334639	Not Available	581	Open in IMG/M
3300014658\|Ga0181519_10358429	Not Available	902	Open in IMG/M
3300014838\|Ga0182030_10677540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	973	Open in IMG/M
3300017946\|Ga0187879_10338110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300017948\|Ga0187847_10394115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300017975\|Ga0187782_10109789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2033	Open in IMG/M
3300017975\|Ga0187782_11176451	Not Available	600	Open in IMG/M
3300018030\|Ga0187869_10594614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300018033\|Ga0187867_10242781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1016	Open in IMG/M
3300018034\|Ga0187863_10087981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1745	Open in IMG/M
3300018035\|Ga0187875_10550631	Not Available	610	Open in IMG/M
3300018038\|Ga0187855_10227898	Not Available	1095	Open in IMG/M
3300018042\|Ga0187871_10184585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300018043\|Ga0187887_10633398	Not Available	631	Open in IMG/M
3300018044\|Ga0187890_10163816	Not Available	1270	Open in IMG/M
3300018057\|Ga0187858_10471478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300020582\|Ga0210395_10090725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2256	Open in IMG/M
3300020583\|Ga0210401_10580578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300021088\|Ga0210404_10623278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300021181\|Ga0210388_10114640	All Organisms → cellular organisms → Bacteria	2318	Open in IMG/M
3300021181\|Ga0210388_10654826	Not Available	916	Open in IMG/M
3300021181\|Ga0210388_10713889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872	Open in IMG/M
3300021181\|Ga0210388_10825067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300021401\|Ga0210393_10133629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1989	Open in IMG/M
3300021402\|Ga0210385_10242019	Not Available	1323	Open in IMG/M
3300021407\|Ga0210383_10271184	Not Available	1458	Open in IMG/M
3300021407\|Ga0210383_11399750	Not Available	582	Open in IMG/M
3300021433\|Ga0210391_10448639	Not Available	1013	Open in IMG/M
3300021433\|Ga0210391_11238846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300021477\|Ga0210398_10275344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1372	Open in IMG/M
3300021477\|Ga0210398_10342491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1219	Open in IMG/M
3300021477\|Ga0210398_11222303	Not Available	593	Open in IMG/M
3300025406\|Ga0208035_1049677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300025862\|Ga0209483_1050452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1962	Open in IMG/M
3300027676\|Ga0209333_1173211	Not Available	576	Open in IMG/M
3300027853\|Ga0209274_10129722	Not Available	1260	Open in IMG/M
3300027853\|Ga0209274_10211109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	989	Open in IMG/M
3300027867\|Ga0209167_10498443	Not Available	666	Open in IMG/M
3300027879\|Ga0209169_10230700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	969	Open in IMG/M
3300027884\|Ga0209275_10335280	All Organisms → cellular organisms → Bacteria → Acidobacteria	845	Open in IMG/M
3300027905\|Ga0209415_10210949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1815	Open in IMG/M
3300027905\|Ga0209415_10765513	Not Available	679	Open in IMG/M
3300028780\|Ga0302225_10272902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300028874\|Ga0302155_10215922	Not Available	835	Open in IMG/M
3300029910\|Ga0311369_10563871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300029911\|Ga0311361_10558877	Not Available	1110	Open in IMG/M
3300029911\|Ga0311361_11086527	Not Available	656	Open in IMG/M
3300029913\|Ga0311362_10329112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1563	Open in IMG/M
3300029914\|Ga0311359_10805619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300029922\|Ga0311363_11640158	Not Available	505	Open in IMG/M
3300029939\|Ga0311328_10347093	Not Available	1083	Open in IMG/M
3300029944\|Ga0311352_10686341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300029951\|Ga0311371_12615606	Not Available	509	Open in IMG/M
3300029952\|Ga0311346_10902116	Not Available	728	Open in IMG/M
3300029955\|Ga0311342_10816723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300029955\|Ga0311342_11099238	Not Available	581	Open in IMG/M
3300029999\|Ga0311339_11324111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300030044\|Ga0302281_10308181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300030045\|Ga0302282_1267368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300030399\|Ga0311353_10829552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300030507\|Ga0302192_10368434	Not Available	591	Open in IMG/M
3300030518\|Ga0302275_10116108	All Organisms → cellular organisms → Bacteria → Acidobacteria	1750	Open in IMG/M
3300030618\|Ga0311354_10881936	Not Available	836	Open in IMG/M
3300030688\|Ga0311345_10157997	All Organisms → cellular organisms → Bacteria → Acidobacteria	2402	Open in IMG/M
3300030760\|Ga0265762_1016307	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1348	Open in IMG/M
3300030815\|Ga0265746_1018832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300030878\|Ga0265770_1057168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300031018\|Ga0265773_1029042	Not Available	585	Open in IMG/M
3300031028\|Ga0302180_10505893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300031090\|Ga0265760_10056840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1184	Open in IMG/M
3300031128\|Ga0170823_15547775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300031231\|Ga0170824_121182220	Not Available	781	Open in IMG/M
3300031231\|Ga0170824_128141133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300031234\|Ga0302325_10769473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1367	Open in IMG/M
3300031469\|Ga0170819_13202223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300031525\|Ga0302326_12673368	Not Available	621	Open in IMG/M
3300031708\|Ga0310686_103598213	Not Available	540	Open in IMG/M
3300031715\|Ga0307476_11015472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300031718\|Ga0307474_10691187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300032770\|Ga0335085_10001902	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	41259	Open in IMG/M
3300032770\|Ga0335085_10062784	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4957	Open in IMG/M
3300032782\|Ga0335082_10968108	Not Available	715	Open in IMG/M
3300032805\|Ga0335078_10121513	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	3736	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.93%
Aquatic	Environmental → Aquatic	23.15%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.78%
Freshwater	Environmental → Aquatic → Freshwater	23.15%
Peat	Environmental → Terrestrial → Peat	23.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	23.15%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	23.15%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.11%
Loam	Environmental → Terrestrial → Soil → Loam	9.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	23.15%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.37%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.26%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.41%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.48%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.81%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	11.11%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	10.19%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	9.26%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	7.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.70%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.78%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.78%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.78%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.85%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.85%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.85%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.93%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300025406	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031018	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_108578572	3300004080	Bog Forest Soil	MINPKRNKNRESIGLYALSRFGGLDRIDWLMILVSVLIGTIAKQHHFLRLPDGFLEWVFPLLLMMAGYKARGKITEIIEDRRAKDRKASAE*
Ga0070733_100953283	3300005541	Surface Soil	MIDPKTNQNRENSGFWTLSQFGGLDQLDWLMILVSVLIGTIAKQHHFLQIPDGFLEWVFPFLLMMAGYKGRGWITEIIEMRRAKTRKTLDE*
Ga0070733_111013781	3300005541	Surface Soil	DPKTNQNRENSGFWTLSKFGGLDRLDWLMILVSILIGTIAKQHHFLQLPDGFLEWVFPFLLMMVGYKGRGWITEIIEVRRAKTRKAPDE*
Ga0070761_107938132	3300005591	Soil	SMIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTLAKQHHFLQLPAGFLEWVFPFLLMMAGYKARGWITEIIGVRRAKTRKAADK*
Ga0070762_101016543	3300005602	Soil	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTLAKQHHFLQLPAGFLEWVFPFLLMMAGYKARGWITEIIGVRRAKTRKAADK*
Ga0070764_102456531	3300005712	Soil	MIDPKTNQNRENSGFWTLSQFGGLDQLDWLMILVSVLIGTIAKQHHFLQIPDGFLEWVFPFLLMMAGYKGRGWITE
Ga0070764_108038611	3300005712	Soil	MIDLKSTQHRENAGSWTPSEFGGLDQLDWLMILVSVLIGTLAKQHHFLQLPAGFLEWVFPFLLMMAGYKARGKITEIIKVRRAKTRKAPDE*
Ga0070766_112435662	3300005921	Soil	MNDPNTNRDRENAEFCTLSKFGGLDQLDWLMILVSVLIGTFAKQHHFLQLPDGFLEWVFTFLLMMAGYKARGWITEIIEVRRAKSRKAADK*
Ga0075522_100370592	3300006638	Arctic Peat Soil	MINPKPNKNRESIGLYALSRFGGLDRIDWLMILVSVLIGTIAKQHHFLRLPDGFLEWVFPLLLMMAGYRARGKITEIIEDRRAKDRKASAE*
Ga0116133_11786362	3300009623	Peatland	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAKAKQAPNE*
Ga0116125_10456552	3300009628	Peatland	MIDPKTNQNRENSGFWTLSQFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAKAKQAPNE*
Ga0116117_10132273	3300009635	Peatland	MIDPKTNQNRDNAGFWALSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAEAKQAPNE*
Ga0116113_10190482	3300009638	Peatland	MIDPKTIQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAKAKQAPNE*
Ga0116121_11407902	3300009644	Peatland	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVFPFLLMMAGYKGRGWITEIIEVRRAKTRKALDE*
Ga0116101_10518372	3300009759	Peatland	MIDPKTNQNRENPGFWALSKFGGLDQLDWLMILVSVLIGTVAKQHHFLQLPDGFLEWVFPFLLMMAGYKARGWSTEIIEVRREKAMKAAGK*
Ga0116101_10581911	3300009759	Peatland	KTNQNRENSGFWTLTKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAKAKQAPNE*
Ga0074045_104965131	3300010341	Bog Forest Soil	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKGRGWITEIIEIRRAKTRKAPDE*
Ga0157369_115368742	3300013105	Corn Rhizosphere	MIDPKTNQNRDNSGFWTLSKFGGLDQLDWLMILVSVLIGTLAKQHQFLQLPAGFLEWVFPFLLMMAGYKARGWITETIEVRRARARRTAGK*
Ga0181538_103948752	3300014162	Bog	MIDPKTNQNRENSGFWTLSKFGGLDRLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAEAKQAPNE*
Ga0181532_105531892	3300014164	Bog	MIDPKTNQNRENSGFWTLTKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAKAKQAPNE*
Ga0181528_100399061	3300014167	Bog	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPAGFLEWVFPFLLMMAGYKARGKITEIIKVRRAKTRKAPDE*
Ga0181534_100150014	3300014168	Bog	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAEAKQAPNE*
Ga0182013_101931863	3300014492	Bog	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITE
Ga0182024_104693592	3300014501	Permafrost	MIDPKTNRNRENAGFWILSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWAFPFLLMMAGYKGRGWITEIIEVRRAKTRKALDE*
Ga0182024_111206792	3300014501	Permafrost	MVDPKTNENREDSGFWTLSKFGGLDQLDWLMILVSVLIGTFAKQHHFLQFPDGFLEWVFPFLLMMAGYKARGWITEIIGVRRAKTRKSADK*
Ga0182024_123346392	3300014501	Permafrost	SMIDPKTNQNRENSGFWALSNFGGLDQLDWLMILVSVLIGIVLKQHHFLQLPDGLLEWVFPFLLMMAGYKARGKITEIIRRAKTRKAPDE*
Ga0181519_103584292	3300014658	Bog	MTDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAKAKQAPNE*
Ga0182030_106775402	3300014838	Bog	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVFPFLLMMAGYKGRGWITEIIEVRRAKTRKTLDE*
Ga0187879_103381101	3300017946	Peatland	MIDPKTNQTRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQIPDGFLEWVFPFLLMMAGYKGRGWITEIIEVRRAKTRKTLDE
Ga0187847_103941152	3300017948	Peatland	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAEAKQAPNE
Ga0187782_101097892	3300017975	Tropical Peatland	VIDPKTNRNRENAGFRTLSKFGGLDQLDWLMILVSVLIGTLAKQHQFLQLPTGFLEWVFPFLLMMVGYKARGTITEIIESRRARTGSTPDE
Ga0187782_111764511	3300017975	Tropical Peatland	SVIDPKTNQNRENAGLWALSRFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPAGFLEWVLPFLLMMVGYKARGKITEIIESRRARTRSTQDE
Ga0187869_105946142	3300018030	Peatland	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLRLPDGFLEWVFPFLLMMAGYKARGWITEIIETRRSKAKNAP
Ga0187867_102427812	3300018033	Peatland	MIDPKTNQNRENSGFWTLSQFGSLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAKAKQAPNE
Ga0187863_100879813	3300018034	Peatland	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAKAKQAPNE
Ga0187875_105506312	3300018035	Peatland	ENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQIPDGFLEWVFPFLLMMAGYKARGKITEIIEVRRAKAKQAPNE
Ga0187855_102278982	3300018038	Peatland	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARRKITEIIEVRRAKAKQAPNE
Ga0187871_101845852	3300018042	Peatland	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVFPFLLMMAGYKGRGWITEIIEVRRAKTRKTLDE
Ga0187887_106333981	3300018043	Peatland	ENSGFWTLSKFGGLDRLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWAFPFLLMMAGYKGRGWITEIIEVRRAKTRKALDE
Ga0187890_101638163	3300018044	Peatland	MIDPKTNQNRENSGFWTLSQFGSLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAEAKQAPNE
Ga0187858_104714782	3300018057	Peatland	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQIPDGFLEWVFPFLLMMAGYKGRGWIT
Ga0210395_100907254	3300020582	Soil	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVFPFLLMMAGYKARGKITEIIKVRRAKTRKAPDE
Ga0210401_105805781	3300020583	Soil	MIDPKTNQNRENSGFWTLSQFGGLDQLDWLMILVSVLIGTIAKQHHFLQIPDGFLEWVFPFLLMMAGYKGRGWITEIIEMRRAKTRKTLDE
Ga0210404_106232781	3300021088	Soil	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVFPFLLMMVGYKGRGWITEI
Ga0210388_101146402	3300021181	Soil	MIDLKSTQHRENAGSWTPSEFGGLDQLDWLMILVSVLIGTLAKQHQFLQLPAGFLEWVFPFLLMMAGYKARGKITEIIKVRRAKTRKAPDE
Ga0210388_106548262	3300021181	Soil	MIDPKTNQNRENSGFWTLSNFGGLDQLDWIMILISVLIGTFAKQHHFLQLPDGFLEWLFPFLLMMAGYKARGWITEIIGVRRAKTRKAADK
Ga0210388_107138892	3300021181	Soil	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVFPFLLMMAGYKGRGWITEIIEARRAKTRKTLDE
Ga0210388_108250672	3300021181	Soil	MIDPKTNQNRENSGFLTLSNFGGLDQLDWLMILISVLIGTFAKQHHFLQLPDGFLEWVFPFLLMMAGYKARGWITETIEV
Ga0210393_101336292	3300021401	Soil	MNDPNTNRDRENAEFCTLSKFGGLDQLDWLMILVSVLIGTFAKQHHFLQLPDGFLEWVFPFLLMMAGYKARGWITEIIEVRRQQTRKAADK
Ga0210385_102420193	3300021402	Soil	MTDPKTNQNRENSGFWTLSKFGGLDRLDWLMILVSILIGTIAKQHHFLQLPDGFLEWVFPFLLMMVGYKGRGWITEIIEVRRAKTRKAPDE
Ga0210383_102711843	3300021407	Soil	MNDPNTNRDRENAEFCTLSKFGGLDQLDWLMILVSVLIGTFAKQHHFLQLPNGFLEWVFPFLLMMAGYKARGWITEIIGVRRAKTRKAADK
Ga0210383_113997502	3300021407	Soil	MIDPKTNQNRENSGFRALSNFGGLDQLDWLMILVSVLIGTFAKQRHFLQLPDGFLEWVFPFLLMMAGYKARGWITETIEVRRAKARRAADK
Ga0210391_104486392	3300021433	Soil	MIDLKSTQNRENAGSWTLSKFGGLDQLDWLMIVVSVLIGTLAKQHHFLQLPAGFLEWVFPFLLMMAGYKARGKITEIIKVRRAKTRKAPDE
Ga0210391_112388461	3300021433	Soil	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQIPDGFLEWVFPFLLMMAGYKGRGWITEIIEARRAKTRKTLDE
Ga0210398_102753443	3300021477	Soil	MIDPKTNRNRENSGFWTLSKFGGLDRLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAKAKQAPNE
Ga0210398_103424912	3300021477	Soil	MIDLKSTQNRENAGSWTLSKFGGLDQLDWLMILVSVLIGTLAKQHHFLQLPAGFLEWVFPFLLMMAGYKARGKITEIIKVRRAKTRKPPEE
Ga0210398_112223032	3300021477	Soil	MIDPKTNQNRENSGFWTLSNFGGLDQMDWLMILISVLIGTFAKQHHFLQLPDGFLEWVFPFLLMMAGYKARGWITEIIEVRREKTRKAADK
Ga0208035_10496772	3300025406	Peatland	MIDPKTNQNRDNAGFWALSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAEAKQAPNE
Ga0209483_10504523	3300025862	Arctic Peat Soil	MINPKPNKNRESIGLYALSRFGGLDRIDWLMILVSVLIGTIAKQHHFLRLPDGFLEWVFPLLLMMAGYRARGKITEIIEDRRAKDRKASAE
Ga0209333_11732111	3300027676	Forest Soil	PKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAKAKQAPNE
Ga0209274_101297221	3300027853	Soil	GSWTPSKFGGLDQLDWLMILVSVLIGTLAKQHHFLQLPAGFLEWVFPFLLMMAGYKARGKITEIIKVRRAKTRKAPDE
Ga0209274_102111092	3300027853	Soil	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAKAKQAPKE
Ga0209167_104984431	3300027867	Surface Soil	ENSGFWTLSKFGGLDRLDWLMILVSILIGTIAKQHHFLQLPDGFLEWVFPFLLMMVGYKGRGWITEIIEVRRAKTRKAPDE
Ga0209169_102307001	3300027879	Soil	MIDPKTNQNRENSGFWTLSQFGGLDQLDWLMILVSVLIGTIAKQHHFLQIPDGFLEWVFPFLLMMAGYKGRGWITEIIEMRRAKTRK
Ga0209275_103352802	3300027884	Soil	MIDPKTNQNRENSGFWTLSQFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVFPFLLMMAGYKARGWITEIIGVRRAKTRKAADK
Ga0209415_102109494	3300027905	Peatlands Soil	MIDPKTNQNRKNSGFWMLSKFGGLDQLDWLMILVSVLIGTLAKQHHFLQLPGRFLEWVFPFLLMMAGYKARGWITEIIGVRRAKTRKAADK
Ga0209415_107655132	3300027905	Peatlands Soil	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDEFLEWAFPFLLMTAGYKGRGWITEIIEVRRAKTRKALDE
Ga0302225_102729021	3300028780	Palsa	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAKAKQAPNQ
Ga0302155_102159222	3300028874	Bog	MIDPKTNQNRENPGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAKAKQAPNE
Ga0311369_105638712	3300029910	Palsa	MIDPKTNQNRENSGFWTLSQFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAKAKQAPNE
Ga0311361_105588771	3300029911	Bog	RSMIDPKTNRDRENAGFWTLSKFGGLDRLDWLMILVSVLIGTFAKQHHFLQLPDGFLEWVFPFLLMMAGYKARGWITEITEVRREKTRKAADK
Ga0311361_110865272	3300029911	Bog	MIDPKTDQNRENSGFWTLSKFRGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAKAKQAPNE
Ga0311362_103291123	3300029913	Bog	MIDPKTNRDRENAGFWTLSKFGGLDRLDWLMILVSVLIGTFAKQHHFLQLPDGFLEWVFPFLLMMAGYKARGWITEITEVRREKTRKAADK
Ga0311359_108056192	3300029914	Bog	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIKDRRAKAGKAPDE
Ga0311363_116401582	3300029922	Fen	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQIPDGFLEWVFPFLLMMAGYKGRGWITEIIEMRRAKTRKAPDE
Ga0311328_103470931	3300029939	Bog	QNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAKAKQAPNE
Ga0311352_106863412	3300029944	Palsa	MIDPKTNQNREYSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAKAKQAPNE
Ga0311371_126156062	3300029951	Palsa	LSNFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVFPFLLMMAGYKARGWITEIIRVRRAKTRKAADK
Ga0311346_109021162	3300029952	Bog	RAERRTRVRRSMIDPKTNRDRENAGFWTLSKFGGLDRLDWLMILVSVLIGTFAKQHHFLQLPDGFLEWVFPFLLMMAGYKARGWITEITEVRREKTRKAADK
Ga0311342_108167231	3300029955	Bog	MIDPKTNRDRENAGFWTLSKFGGLDRLDWLMILVSVLIGTFAKQHHFLQLPDGFLEWVFPFLLMMAGYKARGWITEIT
Ga0311342_110992381	3300029955	Bog	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIKVRRAKAKQAPNE
Ga0311339_113241112	3300029999	Palsa	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQHPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAKAKQAPNE
Ga0302281_103081811	3300030044	Fen	MIDPKTNRNREDSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQIPDGFLEWVFPFLLMMAGYKGRGWI
Ga0302282_12673681	3300030045	Fen	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVFPFLLMMAGYKARGKITEIIKDRR
Ga0311353_108295522	3300030399	Palsa	MIDPKTNQTRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAEAKQAPNE
Ga0302192_103684342	3300030507	Bog	TNQNRDNAGFWALSKFGGLDQLDWLMILVSVLIGTVAKQHHFLQLPDGFLEWVFPFLLMMAGYKARGKITEIIEVRRAEAKQAPNE
Ga0302275_101161083	3300030518	Bog	MIDPKTNQNRENPGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAKAKQA
Ga0311354_108819362	3300030618	Palsa	RENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIAVRRAKAKQAPNE
Ga0311345_101579971	3300030688	Bog	MIDPKTNQNRDNAGFWALSKFGGLDQLDWLMILVSVLIGTVAKQHHFLQLPDGFLEWVFPFLLMMAGYKARGKITEIIKDRRAKAGKAPDE
Ga0265762_10163073	3300030760	Soil	MIDPKTNQNREYSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIKVRRAKAKQAPNE
Ga0265746_10188321	3300030815	Soil	MIDPKKNRNRENSGLWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWAFPFLLMMAGYKGRGWITEIIEVRRAKARKAADK
Ga0265770_10571681	3300030878	Soil	MIDPKTNQNRENSGFWTLSNFGGLDQLDWLMVLISVLIGTVAKQHHFLRLPDGFLEWVFPFLLMMAGYKARGWITEIIGVRRAKTRKAADK
Ga0265773_10290422	3300031018	Soil	MIVPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVFPFLLMMAGYKARGWITEIIGVRRAKTRKAADK
Ga0302180_105058931	3300031028	Palsa	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIATQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAEAKQAPNE
Ga0265760_100568402	3300031090	Soil	MIDPKTNQNRENFGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKARGKITEIIEVRRAKAKQAPNE
Ga0170823_155477752	3300031128	Forest Soil	MIDPKTNHNRENSGFWALSNFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWAFPFLLMMAGYKARGWITEIIGFRRAKTRKSAD
Ga0170824_1211822201	3300031231	Forest Soil	GFWTLSKFGGLDQLDWLMILVSVLIGTIAKRHHFLQLPDGFLEWVFLFLLMMAGCKGRGWITEIIEVRRAKTRKTLDE
Ga0170824_1281411331	3300031231	Forest Soil	MIDPKTNHNRENSGFWALSNFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWAFPFLLMMAGYKARGWITEIIGVRRAKTRKAADK
Ga0302325_107694732	3300031234	Palsa	MIDPKTNHNRENSGFWALSNFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVFPFLLMMAGYKARGWITEIIRVRRAKTRKAADK
Ga0170819_132022232	3300031469	Forest Soil	MIDPKTNHNRENSGFWALSNFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWAFPFLLMMAGYKARGWITEIIGVRRAKTRKAADQ
Ga0302326_126733682	3300031525	Palsa	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVFPFLLMMAGYRGRGWITEIIEVRRAKTRQALDE
Ga0310686_1035982132	3300031708	Soil	MIDPKTNQNRENSGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQIPDGFLEWVFPFLLMMAGYKGRGWITEIIEVRRAKTRKTLDE
Ga0307476_110154722	3300031715	Hardwood Forest Soil	MIDPKTNRDRENAGFWTLSKFGGLDQLDWLMILVSVLIGTIAKQHHFLQLPDGFLEWVLPFLLMMAGYKGRGWIT
Ga0307474_106911872	3300031718	Hardwood Forest Soil	MIDPETNQNRENSGFWTLSNFGGLDQLDWLMILISVLIGTFAKQHHFLQLPDGFLEWVFPFLLMMAGYKARSWITETIEVRRAKAGKAADK
Ga0335085_1000190233	3300032770	Soil	MIDPKTNHNRENAGSWTLSKFGGLDQLDWLMILVSVLIGTLAKQHHFLELPAGFLEWVFPFLLMMVGYRVRGKITEIIESRRATTRSTQDE
Ga0335085_100627845	3300032770	Soil	MIDPNTNRDRENAEFWTLSKFGGLDQLDWLMILVSVLIGTFAKQHHFLQLPDGFLEWVFPFLLMMAGYKARGWSTEIIEVRWEKAMKAAGK
Ga0335082_109681082	3300032782	Soil	EFWTLSKFGGLDQLDWLMILVSVLIGTFAKQHHFLQLPDGFLEWVFPFLLMMAGYKARGWSTEIIEVRWEKAMKAAGK
Ga0335078_101215133	3300032805	Soil	MIDPNTNRDRENAEFWTLSKFGGLDQLDWLMILVSVLIGTFAKQHHYLQLPDGFLEWVFPFLLMMAGYKARGWSTEIIEVRWEKAMKAAGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090320

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences