Metagenome / Metatranscriptome Family F090386

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090386
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	82 residues
Representative Sequence	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILEQ
Number of Associated Samples	89
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	74.07 %
% of genes near scaffold ends (potentially truncated)	30.56 %
% of genes from short scaffolds (< 2000 bps)	79.63 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.815 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (28.704 % of family members)
Environment Ontology (ENVO)	Unclassified (37.037 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (49.074 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.02% β-sheet: 10.81% Coil/Unstructured: 71.17%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.18.1.0: automated matches	d3r9za_	3r9z	0.57239
a.127.1.2: HAL/PAL-like	d1w27a_	1w27	0.5697
d.18.1.4: Guide RNA binding protein gBP	d2giab1	2gia	0.5468
f.67.1.1: Bestropin channel-like	d4wd8a_	4wd8	0.53751
a.104.1.0: automated matches	d2hi4a_	2hi4	0.53749

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF01521	Fe-S_biosyn	3.70
PF05257	CHAP	1.85
PF07739	TipAS	1.85
PF04973	NMN_transporter	1.85
PF01844	HNH	1.85
PF05711	TylF	0.93
PF02467	Whib	0.93
PF00210	Ferritin	0.93
PF13602	ADH_zinc_N_2	0.93
PF06067	DUF932	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	3.70
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	3.70
COG3201	Nicotinamide riboside transporter PnuC	Coenzyme transport and metabolism [H]	1.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.81 %
All Organisms	root	All Organisms	35.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.81 %
Viruses	superkingdom	All Organisms → Viruses	35.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.81 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	31.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.81 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	31.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.81 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	31.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.81 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	31.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.81 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	29.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.81 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	29.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000736\|JGI12547J11936_1003893	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4136	Open in IMG/M
3300000756\|JGI12421J11937_10051104	Not Available	1340	Open in IMG/M
3300002835\|B570J40625_100126193	Not Available	3022	Open in IMG/M
3300003490\|JGI25926J51410_1049423	Not Available	731	Open in IMG/M
3300003497\|JGI25925J51416_10009238	All Organisms → Viruses → Predicted Viral	2928	Open in IMG/M
3300004112\|Ga0065166_10482823	Not Available	524	Open in IMG/M
3300004792\|Ga0007761_11283406	Not Available	567	Open in IMG/M
3300005517\|Ga0070374_10191743	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1053	Open in IMG/M
3300005581\|Ga0049081_10224161	Not Available	667	Open in IMG/M
3300005582\|Ga0049080_10072164	Not Available	1183	Open in IMG/M
3300005582\|Ga0049080_10184950	Not Available	691	Open in IMG/M
3300005584\|Ga0049082_10214986	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	656	Open in IMG/M
3300005662\|Ga0078894_10444627	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1168	Open in IMG/M
3300005662\|Ga0078894_10876114	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	780	Open in IMG/M
3300005662\|Ga0078894_11300559	Not Available	611	Open in IMG/M
3300005941\|Ga0070743_10011182	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3163	Open in IMG/M
3300006484\|Ga0070744_10037639	Not Available	1427	Open in IMG/M
3300006484\|Ga0070744_10037755	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1425	Open in IMG/M
3300006484\|Ga0070744_10073012	Not Available	996	Open in IMG/M
3300006484\|Ga0070744_10098854	Not Available	843	Open in IMG/M
3300006484\|Ga0070744_10099897	Not Available	838	Open in IMG/M
3300007546\|Ga0102874_1068801	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1131	Open in IMG/M
3300007547\|Ga0102875_1225369	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	577	Open in IMG/M
3300007549\|Ga0102879_1049657	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1346	Open in IMG/M
3300007555\|Ga0102817_1074889	Not Available	741	Open in IMG/M
3300007559\|Ga0102828_1038718	Not Available	1087	Open in IMG/M
3300007560\|Ga0102913_1182847	Not Available	674	Open in IMG/M
3300007585\|Ga0102916_1184797	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	565	Open in IMG/M
3300007590\|Ga0102917_1012076	Not Available	2955	Open in IMG/M
3300007603\|Ga0102921_1248626	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	636	Open in IMG/M
3300007618\|Ga0102896_1154251	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	733	Open in IMG/M
3300007620\|Ga0102871_1134373	Not Available	701	Open in IMG/M
3300007621\|Ga0102872_1167074	Not Available	582	Open in IMG/M
3300007622\|Ga0102863_1161059	Not Available	661	Open in IMG/M
3300007624\|Ga0102878_1082405	Not Available	961	Open in IMG/M
3300007639\|Ga0102865_1142906	Not Available	716	Open in IMG/M
3300007661\|Ga0102866_1006142	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2691	Open in IMG/M
3300007972\|Ga0105745_1153331	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	707	Open in IMG/M
3300007973\|Ga0105746_1086728	Not Available	1017	Open in IMG/M
3300008052\|Ga0102893_1086223	Not Available	937	Open in IMG/M
3300008055\|Ga0108970_10011812	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	658	Open in IMG/M
3300008055\|Ga0108970_11771344	Not Available	1211	Open in IMG/M
3300008261\|Ga0114336_1133073	Not Available	1124	Open in IMG/M
3300008950\|Ga0102891_1020411	Not Available	2110	Open in IMG/M
3300008996\|Ga0102831_1118215	Not Available	881	Open in IMG/M
3300008999\|Ga0102816_1203914	Not Available	619	Open in IMG/M
3300009049\|Ga0102911_1210700	Not Available	547	Open in IMG/M
3300009161\|Ga0114966_10122542	Not Available	1721	Open in IMG/M
3300009181\|Ga0114969_10641807	Not Available	578	Open in IMG/M
3300009183\|Ga0114974_10078521	All Organisms → Viruses → Predicted Viral	2153	Open in IMG/M
3300010160\|Ga0114967_10569259	Not Available	547	Open in IMG/M
3300010312\|Ga0102883_1113921	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	781	Open in IMG/M
3300010312\|Ga0102883_1157274	Not Available	649	Open in IMG/M
3300010885\|Ga0133913_12458586	Not Available	1271	Open in IMG/M
3300012000\|Ga0119951_1014283	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3072	Open in IMG/M
3300012012\|Ga0153799_1087681	Not Available	557	Open in IMG/M
3300012017\|Ga0153801_1059252	Not Available	673	Open in IMG/M
3300012666\|Ga0157498_1021168	Not Available	1014	Open in IMG/M
3300013004\|Ga0164293_10164897	Not Available	1633	Open in IMG/M
3300013092\|Ga0163199_1178195	Not Available	843	Open in IMG/M
3300017761\|Ga0181356_1015179	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2883	Open in IMG/M
3300017774\|Ga0181358_1193476	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	669	Open in IMG/M
3300020160\|Ga0211733_10975148	Not Available	1461	Open in IMG/M
3300021963\|Ga0222712_10004481	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14596	Open in IMG/M
3300023174\|Ga0214921_10001452	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	40427	Open in IMG/M
3300024343\|Ga0244777_10351559	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	924	Open in IMG/M
3300024346\|Ga0244775_10001709	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	24919	Open in IMG/M
3300024346\|Ga0244775_10121226	All Organisms → Viruses → Predicted Viral	2216	Open in IMG/M
3300024346\|Ga0244775_10297160	Not Available	1339	Open in IMG/M
3300024346\|Ga0244775_10328487	Not Available	1265	Open in IMG/M
3300024346\|Ga0244775_10918557	Not Available	694	Open in IMG/M
3300024346\|Ga0244775_11395546	Not Available	539	Open in IMG/M
3300024346\|Ga0244775_11432026	Not Available	530	Open in IMG/M
3300024348\|Ga0244776_10109605	Not Available	2054	Open in IMG/M
3300027121\|Ga0255074_1027379	Not Available	711	Open in IMG/M
3300027123\|Ga0255090_1040840	Not Available	715	Open in IMG/M
3300027135\|Ga0255073_1075456	Not Available	535	Open in IMG/M
3300027138\|Ga0255064_1049935	Not Available	663	Open in IMG/M
3300027139\|Ga0255082_1034152	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	817	Open in IMG/M
3300027188\|Ga0208921_1025107	Not Available	905	Open in IMG/M
3300027193\|Ga0208800_1012532	Not Available	1090	Open in IMG/M
3300027246\|Ga0208931_1060611	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	712	Open in IMG/M
3300027281\|Ga0208440_1002181	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5264	Open in IMG/M
3300027286\|Ga0255129_1064096	Not Available	549	Open in IMG/M
3300027294\|Ga0208441_1034023	Not Available	1200	Open in IMG/M
3300027387\|Ga0208311_1058761	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	901	Open in IMG/M
3300027508\|Ga0255072_1002838	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3875	Open in IMG/M
3300027581\|Ga0209651_1099128	Not Available	822	Open in IMG/M
3300027597\|Ga0255088_1105634	Not Available	514	Open in IMG/M
3300027608\|Ga0208974_1123337	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	675	Open in IMG/M
3300027631\|Ga0208133_1005916	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3579	Open in IMG/M
3300027631\|Ga0208133_1007611	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3081	Open in IMG/M
3300027644\|Ga0209356_1031092	Not Available	1744	Open in IMG/M
3300027644\|Ga0209356_1067802	Not Available	1082	Open in IMG/M
3300027679\|Ga0209769_1152953	Not Available	730	Open in IMG/M
3300027710\|Ga0209599_10130446	Not Available	666	Open in IMG/M
3300027720\|Ga0209617_10002281	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9062	Open in IMG/M
3300027720\|Ga0209617_10203933	Not Available	761	Open in IMG/M
3300027720\|Ga0209617_10239884	Not Available	689	Open in IMG/M
3300027754\|Ga0209596_1001657	Not Available	18940	Open in IMG/M
3300027759\|Ga0209296_1089627	All Organisms → Viruses → Predicted Viral	1494	Open in IMG/M
3300027772\|Ga0209768_10282048	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	706	Open in IMG/M
3300027797\|Ga0209107_10133129	Not Available	1290	Open in IMG/M
3300027798\|Ga0209353_10135927	Not Available	1101	Open in IMG/M
3300027808\|Ga0209354_10316667	Not Available	618	Open in IMG/M
3300034082\|Ga0335020_0000037	Not Available	109168	Open in IMG/M
3300034102\|Ga0335029_0284494	Not Available	1051	Open in IMG/M
3300034112\|Ga0335066_0217398	Not Available	1123	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.15%
Host-Associated	Host-Associated	1.85%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.22%
Plants	Host-Associated → Plants	1.85%
Terrestrial	Environmental → Terrestrial	0.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	51.85%
Marine	Environmental → Aquatic → Marine	45.37%
Leaf	Host-Associated → Plants → Leaf	1.85%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.93%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	28.70%
Lentic	Environmental → Aquatic → Freshwater → Lentic	26.85%
Lake	Environmental → Aquatic → Freshwater → Lake	17.59%
Unclassified	Environmental → Aquatic → Marine → Unclassified	14.81%
River	Environmental → Aquatic → Freshwater → River	7.41%
Coastal	Environmental → Aquatic → Marine → Coastal	1.85%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	1.85%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	28.70%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	20.37%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	17.59%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	14.81%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	7.41%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	4.63%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.85%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.85%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	1.85%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	28.70%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	15.74%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	13.89%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	7.41%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	6.48%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.56%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	4.63%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	3.70%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.70%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	1.85%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.85%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	1.85%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.93%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.93%
Freshwater, Surface Ice	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice	0.93%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.93%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000736	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011	Environmental	Open in IMG/M
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003490	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN	Environmental	Open in IMG/M
3300003497	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004792	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007546	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02	Environmental	Open in IMG/M
3300007547	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02	Environmental	Open in IMG/M
3300007549	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02	Environmental	Open in IMG/M
3300007555	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007560	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-02	Environmental	Open in IMG/M
3300007585	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-3	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007603	Estuarine microbial communities from the Columbia River estuary - metaG 1568-02	Environmental	Open in IMG/M
3300007618	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-02	Environmental	Open in IMG/M
3300007620	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02	Environmental	Open in IMG/M
3300007621	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-3	Environmental	Open in IMG/M
3300007622	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02	Environmental	Open in IMG/M
3300007624	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02	Environmental	Open in IMG/M
3300007639	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02	Environmental	Open in IMG/M
3300007661	Estuarine microbial communities from the Columbia River estuary - metaG 1546A-3	Environmental	Open in IMG/M
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300008052	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008950	Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300008999	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545	Environmental	Open in IMG/M
3300009049	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010312	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-02	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012000	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007A	Environmental	Open in IMG/M
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental	Open in IMG/M
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental	Open in IMG/M
3300012666	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Surface Ice version 2	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013092	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_150m	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300027121	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepC_8h	Environmental	Open in IMG/M
3300027123	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepA_8d	Environmental	Open in IMG/M
3300027135	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepB_8h	Environmental	Open in IMG/M
3300027138	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepB_0h	Environmental	Open in IMG/M
3300027139	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepB_8h	Environmental	Open in IMG/M
3300027188	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709 (SPAdes)	Environmental	Open in IMG/M
3300027193	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes)	Environmental	Open in IMG/M
3300027246	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02 (SPAdes)	Environmental	Open in IMG/M
3300027281	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02 (SPAdes)	Environmental	Open in IMG/M
3300027286	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepA_8d	Environmental	Open in IMG/M
3300027294	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02 (SPAdes)	Environmental	Open in IMG/M
3300027387	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02 (SPAdes)	Environmental	Open in IMG/M
3300027508	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepA_8h	Environmental	Open in IMG/M
3300027581	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027597	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepB_8d	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027644	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027679	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027720	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027772	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12547J11936_10038939	3300000736	Freshwater And Sediment	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEDTIFKSEHILDDETLLMHILQHRISGHNIPEGLESEILSDPDRYGKLVD*
JGI12421J11937_100511043	3300000756	Freshwater And Sediment	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEHTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILDQ*
B570J40625_1001261938	3300002835	Freshwater	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHILQHRISGHNMPDSLAQDILADPDRYGEYE*
JGI25926J51410_10494231	3300003490	Freshwater Lake	MAYSRFWDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILSDPERYGILEQ*
JGI25925J51416_1000923810	3300003497	Freshwater Lake	MAYSRFWDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEA
Ga0065166_104828232	3300004112	Freshwater Lake	DSDIYIYPHVDGHIECAGCFLNIPTDEYNLFKSECILDDETLLMHILQHRISGHNIPEGLESEILSDPDRYGEMRRGSQ*
Ga0007761_112834062	3300004792	Freshwater Lake	LNKNGRIKGGRTMAYSRFWDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILEQ*
Ga0070374_101917431	3300005517	Freshwater Lake	MAYSRFYDSDIYIYPSVEGYIECAGCFLNIPKDEHTIFQSTKIYDDETLLMHMVQHRISGHNIPDGLEAEI
Ga0049081_102241611	3300005581	Freshwater Lentic	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHILQHKISGHNIPDSLAQDILADPDRYGEYKAGNQGV*
Ga0049080_100721642	3300005582	Freshwater Lentic	MAYSRFWDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNIPDGLEAEILRDPERYGILEQ*
Ga0049080_101849501	3300005582	Freshwater Lentic	YPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHILQHKISGHNIPDSLAQDILADPDRYGEYKAGNQGV*
Ga0049082_102149862	3300005584	Freshwater Lentic	MAYARFWDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILSDPERYGILEQ*
Ga0078894_104446273	3300005662	Freshwater Lake	MAYSRFYDSDIYIYPSVEGYIECAGCFLNIPKDEHTIFQSTKIYDDETLLMHMVQHRISEHNIPDGLEAEILRDPDRYGILEQ*
Ga0078894_108761141	3300005662	Freshwater Lake	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEHTIFQSTKIYDDETLLMHIVQHRISGHNVPDGLEAEILRDPDRYGILEQ*
Ga0078894_113005592	3300005662	Freshwater Lake	MAYCRFTDSDIYIYPHVSGHIECQACFLNEPTDEYTLLSMSEYIRDDETLLMHILRHRIAGHNVPDGLEAEILRDPERYGILEQ*
Ga0070743_100111823	3300005941	Estuarine	MAYSRFWDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHIVQHRISGHNIPENLEAEILRDPERYGILEQ*
Ga0070744_100376392	3300006484	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAACFLNEPTDEYTLLSMSEHILDDETLLMHILQHRISGHNIPEGLESEILSDPDRYGEMRRGSQ*
Ga0070744_100377553	3300006484	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILEQ*
Ga0070744_100730121	3300006484	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNIPTDEYTLFKSERILDDETLLMHIVRHRISGHNIPDNLEADILSDPDRYGRDEEI*
Ga0070744_100988541	3300006484	Estuarine	YIYPSVEGHIECAGCFLTISPDEHTIFQSTKIYDDETLLMHIVQHRISGHNIPDDLEAEILRDPERYGI*
Ga0070744_100998972	3300006484	Estuarine	IYPHVDGHIECAGCFLNIPTDEYTLFKSEHILDDETLLMHIVRHRISGHNIPENLEAEILSDPDRYGAGTDD*
Ga0102874_10688013	3300007546	Estuarine	LDQIDKGAEPMAYARFYDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHIVQHRISGHNIPENLEAEILRDPERYGILEQ*
Ga0102875_12253692	3300007547	Estuarine	LDLIDKGREPMAYSRFWDSDIYIYPSVGGWIECAGCFLNISPDEDTIFKSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILEQ*
Ga0102879_10496571	3300007549	Estuarine	LDLIDKGREPMAYSRFWDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHIVQHRISGHNIPENLEAEILRDPERYGILEQ*
Ga0102817_10748892	3300007555	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHIVQHRISGHNIPEGLEAEILRDPEKYGILEQ*
Ga0102828_10387181	3300007559	Estuarine	MAYSRFWDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHIVQHRISGHNIPENLEAEILRDSERYGILEQ*
Ga0102913_11828471	3300007560	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLTISPDEHTIFQSTKIYDDETLLMHMVQHRISGHNIPDNLEAEILRDPDRYGRNQEI*
Ga0102916_11847972	3300007585	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNIPDDLEAEILRDPERYGILEQ*
Ga0102917_10120767	3300007590	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHIVQHRISGHNIPENLEAEILRDPERYGILEQ*
Ga0102921_12486262	3300007603	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEDTIFKSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILEQ*
Ga0102896_11542514	3300007618	Estuarine	MAYSRFWDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHMVQHRISGHNVPDGLE
Ga0102871_11343732	3300007620	Estuarine	YPSVGGWIECAGCFLNISPDEDTIFKSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILEQ*
Ga0102872_11670743	3300007621	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETILMHIVQHRISGHNIPDGLEAEILRDPERYGILEQ*
Ga0102863_11610591	3300007622	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHMVQHRISGHNIPDGLEAEILRDPERYGILEQ*
Ga0102878_10824051	3300007624	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHIVQHRISGHNIPENLEAEILRDPERYGILEQ*
Ga0102865_11429061	3300007639	Estuarine	MAYARFYDSDIYIYPSVGGWIECAGCFLNISPDEHTIFQSTKIYDDETLLMHMVQHRISGHNIPEGLEAEILSDPERYGILEQ*
Ga0102866_10061422	3300007661	Estuarine	LDLIDKGREPMAYSRFWDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILEQ*
Ga0105745_11533312	3300007972	Estuary Water	LDLIDKGREPMAYSRFWDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHIVQHRISGHNIPENLEAEILRDPERYGKYNEPNQ*
Ga0105746_10867281	3300007973	Estuary Water	MAYSRFYDSDIYIYPSVGGWIECAGCFLAISPDEDTIFQSTKIYNDETLLMHMVQHRISGHNIPDGLEAEILRDPERYGILEQ*
Ga0102893_10862231	3300008052	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEHTIFQSTKIYDDETLLMHMVQHRISGHNVPDGLEAEILRDPERYGKLDD*
Ga0108970_100118122	3300008055	Estuary	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILDQ*
Ga0108970_117713445	3300008055	Estuary	MAYSRFYDSDIYIYPSVGGWIECAGCFLTISPDEHTIFQSTKIYDDETLLMHIVQHRISGHNVPEGLEAEILRDPERYGILEQ*
Ga0114336_11330733	3300008261	Freshwater, Plankton	MAYSRFTDSDIYIYPHVSGHIECQACFLNEPTDEYTLLSMSEYIRDDETLLMHILRHRIAGHNVPDGLEAEILRDPERYGILEQ*
Ga0102891_10204115	3300008950	Estuarine	MAYSRFWDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHIVQHRISGHNIPEGLEAEILRDPERYGILDQ*
Ga0102831_11182152	3300008996	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNIPTDEYNLFKSEHILDDETLLMHILQHRISGHNIPEGLESEILSDPDRYGKLVD*
Ga0102816_12039143	3300008999	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHMVQHRISGHNVPDNLEAEILSDPERYGILEQ*
Ga0102911_12107002	3300009049	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILSDPERYGILEQ*
Ga0114966_101225422	3300009161	Freshwater Lake	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISEGVKTSPDEHTIFQSTKIYDDETLLMHIVQHRISGHNIPDDLEDEIMSDSERYGKLES*
Ga0114969_106418071	3300009181	Freshwater Lake	NKNGRTKGGRTMAYSRFYDSDIYIYPSVGGWIECAGCFLNIPKDEHTIFQSTKIYDDETLLMHMVQHRISGHNIPDDLEAEILRDPERYGI*
Ga0114974_100785213	3300009183	Freshwater Lake	MAYSRFYDSDIYIYPSVGGWIECAGCFLTISPDEHTIFQSTKIYDDETLLMHIVQHRISGHNIPDGLEAEILRDPERYGILEQ*
Ga0114967_105692592	3300010160	Freshwater Lake	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISEGVKTSPDEHTIFQSTKIYDDETLLMHMVQHRISGHNIPDGLEAEILRDPERYGILDQ*
Ga0102883_11139212	3300010312	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILEQ*
Ga0102883_11572741	3300010312	Estuarine	GREPMAYSRFYDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHIVQHRISGHNIPENLEAEILRDPERYGILEQ*
Ga0133913_124585865	3300010885	Freshwater Lake	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEDIIFKSKSMNDDETLLMHILQHRISGHKIPDGLEEEILRDPERYGI
Ga0119951_10142836	3300012000	Freshwater	MAYSRFYDSDIYIYPSVFGWIECSGCFLNTSPDEDTIFKSERIHDDKTLLMHMLQHRISGHNIPDGLEAKILSDPERYGKIDG*
Ga0153799_10876811	3300012012	Freshwater	IYIYPHIDGHIECAGCFLNISPDEDTIFKSEHILDDETLLMHILQHRISGHNIPEGLEAEILSDPDRYGKLVD*
Ga0153801_10592523	3300012017	Freshwater	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILSDPDRYGILEQ*
Ga0157498_10211681	3300012666	Freshwater, Surface Ice	EPMAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHILQHKISGHNIPDSLAQDILADPDRYGEYKAGNQGV*
Ga0164293_101648972	3300013004	Freshwater	MAYSRFTDSDIYIYPHVSGYIECQACFLNEPTDEYTLLSMSEHILDDETLLMHILRHRIAGHNVPEGLEAEILSDPDRYGKLVD*
Ga0163199_11781951	3300013092	Freshwater	MAYSRFYDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDEETLLMHMVQHRISGHNVPDNLEAEILRDPERYGILEQ*
Ga0181356_10151792	3300017761	Freshwater Lake	MAYSRFWDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILEQ
Ga0181358_11934761	3300017774	Freshwater Lake	MAYARFWDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLE
Ga0211733_109751481	3300020160	Freshwater	FYDSDIYIYPSVEGHIECAGCFLNISPDEHTIFYSTKIYDDETLLMHLVQHAISGHNMPDNLAQDILADPDRYGAIS
Ga0222712_1000448120	3300021963	Estuarine Water	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEHTIFQSTKIYDDETLLMHMVQHRISGHNIPDGLEAEILRDPERYGILEQ
Ga0214921_1000145277	3300023174	Freshwater	MAYSRFYDSDIYIYPSVFGWIECSGCFLNTSPDEDTIFKSERIHDDKTLLMHMLQHRISGHNIPDGLEA
Ga0244777_103515594	3300024343	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPDGLEAEILRDPERYGILEQ
Ga0244775_100017099	3300024346	Estuarine	MAYSRFWDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHIVQHRISGHNIPENLEAEILRDPERYGILEQ
Ga0244775_101212262	3300024346	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNIPTDEYNLFKSEHILDDETLLMHILQHRISGHNIPEGLESEILSDPDRYGKLVD
Ga0244775_102971602	3300024346	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAACFLNEPTDEYTLLSMSEHILDDETLLMHILQHRISGHNIPEGLESEILSDPDRYGEMRRGSQ
Ga0244775_103284871	3300024346	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNIPTDEYTLFKSERILDDETLLMHIVRHRISGHNIPDNLEADILSDPDRYGRDEEI
Ga0244775_109185573	3300024346	Estuarine	IYPHVDGHIECAGCFLNIPTDEYTLFKSEHILDDETLLMHIVRHRISGHNIPENLEAEILSDPDRYGAGTDD
Ga0244775_113955462	3300024346	Estuarine	YIYPSVGGWIECAGCFLAISPNEHTIFQSTKIYDDETLLMHIVQHRISGHNIPDNLEAEILRDPERYGKYNESNQ
Ga0244775_114320261	3300024346	Estuarine	YIYPSVEGHIECAGCFLTISPDEHTIFQSTKIYDDETLLMHIVQHRISGHNIPDDLEAEILRDPERYGIXPIYYIALYAT
Ga0244776_101096054	3300024348	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEDTIFKSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILEQ
Ga0255074_10273793	3300027121	Freshwater	MAYSRFYDSDIYIYPSVGGWIECAGCFLTISPDEHTIFQSTKIYDDETLLMHIVQHRISGHNVPDGLEAEILRDPERYGILEQ
Ga0255090_10408403	3300027123	Freshwater	MAYSRFYDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHIVQHRISGHNVPDGLEAEILRDPERYGILDQ
Ga0255073_10754561	3300027135	Freshwater	IYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILDQ
Ga0255064_10499351	3300027138	Freshwater	MAYSRFYDSDIYIYPSVGGWIECAGCFLTISPDEHTIFQSTKIYDDETLLMHIVQHRISGHNVPDGLEAEILRDPERYGILDQ
Ga0255082_10341521	3300027139	Freshwater	MAYSRFYDSDIYIYPSVGGWIECAGCFLTISPDEHTIFQSTKIYDDETLLMHIVQHRISGHNVPDDLEAEILRDPE
Ga0208921_10251075	3300027188	Estuarine	MAYSRFWDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHIVQHRISGHNIPENLEA
Ga0208800_10125322	3300027193	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGKYDG
Ga0208931_10606112	3300027246	Estuarine	MAYSRFWDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHIVQHRISGHNIPENLEAEILRDPERYGKLDD
Ga0208440_100218113	3300027281	Estuarine	MAYSRFWDSDIYIYPSVGGWIECAGCFLNISPDEDTIFKSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILEQ
Ga0255129_10640961	3300027286	Freshwater	YDSDIYIYPSVFGHIECAGCFLNISPNEHTIFQSTKISDDETLLMHILQHRISGHNIPEDLEAEILRDPERYGTLEQ
Ga0208441_10340232	3300027294	Estuarine	MAYSRFWDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILEQ
Ga0208311_10587611	3300027387	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHIVQHRISGHNIPENLEAEILRDPERYGI
Ga0255072_100283812	3300027508	Freshwater	MAYSRFWDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILDQ
Ga0209651_10991281	3300027581	Freshwater Lake	MAYSRFWDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILSDPERYGILEQ
Ga0255088_11056341	3300027597	Freshwater	SRFYDSDIYIYPSVGGWIECAGCFLTISPDEHTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILDQ
Ga0208974_11233373	3300027608	Freshwater Lentic	MAYSRFWDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHILQHKISGHNIPDSLAQDILADPDRYGEY
Ga0208133_10059162	3300027631	Estuarine	MAYSRFYDSDIYIYPSVGGWIECAGCFLNIPTDEHTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILEQ
Ga0208133_10076119	3300027631	Estuarine	YIYPSVEGHIECAGCFLTISPDEHTIFQSTKIYDDETLLMHIVQHRISGHNIPDDLEAEILRDPERYGI
Ga0209356_10310921	3300027644	Freshwater Lake	WDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILEQ
Ga0209356_10678024	3300027644	Freshwater Lake	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILE
Ga0209769_11529531	3300027679	Freshwater Lake	MAYARFWDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILEQ
Ga0209599_101304462	3300027710	Deep Subsurface	MAYSRFTDSDIYIYPHVSGYIECQACFLNEPTDEYTLLSMSEHILDDETLLMHILQHRISGHNIPEGLESEILSDPDRYGKLVD
Ga0209617_100022814	3300027720	Freshwater And Sediment	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEDTIFKSEHILDDETLLMHILQHRISGHNIPEGLESEILSDPDRYGKLVD
Ga0209617_102039331	3300027720	Freshwater And Sediment	FYDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPDGLEAEILRDPERYGILEQ
Ga0209617_102398841	3300027720	Freshwater And Sediment	SVGGWIECAGCFLNISPDEHTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILRDPERYGILDQ
Ga0209596_100165741	3300027754	Freshwater Lake	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISEGVKTSPDEHTIFQSTKIYDDETLLMHIVQHRISGHNIPDDLEDEIMSDSERYGKLES
Ga0209296_10896274	3300027759	Freshwater Lake	MAYSRFYDSDIYIYPSVGGWIECAGCFLTISPDEHTIFQSTKIYDDETLLMHIVQHRISGHNIPDGLEAEILRDPERYGILEQ
Ga0209768_102820482	3300027772	Freshwater Lake	MAYARFWDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILSDPERYGILEQX
Ga0209107_101331293	3300027797	Freshwater And Sediment	IKGGEAMAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEDTIFKSEHILDDETLLMHILQHRISGHNIPEGLESEILSDPDRYGKLVD
Ga0209353_101359271	3300027798	Freshwater Lake	MAYARFWDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLEAEILSDPERYGILEQ
Ga0209354_103166672	3300027808	Freshwater Lake	MAYARFWDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLMHMVQHRISGHNVPEGLESEILSDPERYGILEQ
Ga0335020_0000037_100737_100991	3300034082	Freshwater	MAYSRFTDSDIYIYPHVSGYIECQACFLNEPTDEYTLLSMSEHILDDETLLMHILRHRIAGHNVPEGLEAEILSDPDRYGKLVD
Ga0335029_0284494_514_762	3300034102	Freshwater	MAYSRFYDSDIYIYPSVGGWIECAGCFLNISPDEDTIFQSTKIYDDETLLIHILQHKISGHNMPDSLAQDILADPDRYGSIS
Ga0335066_0217398_827_1075	3300034112	Freshwater	MAYSRFTDSDIYIYPHVSGYIECQACFLNEPTDEYTLLSMSEHILDDETLLMHILQHRISGHNIPEGLESEILSDPDRYGRE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090386

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences