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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F090535 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 108 |
| Average Sequence Length | 118 residues |
| Representative Sequence | MKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK |
| Number of Associated Samples | 88 |
| Number of Associated Scaffolds | 108 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 52.34 % |
| % of genes near scaffold ends (potentially truncated) | 56.48 % |
| % of genes from short scaffolds (< 2000 bps) | 88.89 % |
| Associated GOLD sequencing projects | 74 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (50.926 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (10.185 % of family members) |
| Environment Ontology (ENVO) | Unclassified (59.259 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (75.926 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 31.15% β-sheet: 29.51% Coil/Unstructured: 39.34% | Feature Viewer |
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| Powered by Feature Viewer | |||||
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| Pfam ID | Name | % Frequency in 108 Family Scaffolds |
|---|---|---|
| PF00296 | Bac_luciferase | 9.26 |
| PF00581 | Rhodanese | 9.26 |
| PF00899 | ThiF | 3.70 |
| PF05237 | Obsolete Pfam Family | 2.78 |
| PF02775 | TPP_enzyme_C | 1.85 |
| PF12543 | DUF3738 | 0.93 |
| PF05016 | ParE_toxin | 0.93 |
| PF02597 | ThiS | 0.93 |
| PF09130 | DUF1932 | 0.93 |
| COG ID | Name | Functional Category | % Frequency in 108 Family Scaffolds |
|---|---|---|---|
| COG2141 | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) | Coenzyme transport and metabolism [H] | 9.26 |
| COG1977 | Molybdopterin synthase sulfur carrier subunit MoaD | Coenzyme transport and metabolism [H] | 0.93 |
| COG2084 | 3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase | Lipid transport and metabolism [I] | 0.93 |
| COG2104 | Sulfur carrier protein ThiS (thiamine biosynthesis) | Coenzyme transport and metabolism [H] | 0.93 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 50.93 % |
| All Organisms | root | All Organisms | 49.07 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 10.19% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 9.26% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 8.33% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 6.48% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 6.48% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 5.56% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 4.63% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 4.63% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 4.63% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 3.70% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 2.78% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 2.78% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 2.78% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.78% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 2.78% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 2.78% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.85% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.85% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.85% |
| Host-Associated | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated | 1.85% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.85% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 1.85% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 0.93% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 0.93% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.93% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 0.93% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.93% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.93% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.93% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.93% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere | 0.93% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2228664022 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300000789 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
| 3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
| 3300004801 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
| 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
| 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
| 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
| 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Environmental | Open in IMG/M |
| 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Environmental | Open in IMG/M |
| 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Environmental | Open in IMG/M |
| 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Environmental | Open in IMG/M |
| 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
| 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Environmental | Open in IMG/M |
| 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
| 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Host-Associated | Open in IMG/M |
| 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
| 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Environmental | Open in IMG/M |
| 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Host-Associated | Open in IMG/M |
| 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
| 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Environmental | Open in IMG/M |
| 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Host-Associated | Open in IMG/M |
| 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Host-Associated | Open in IMG/M |
| 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Host-Associated | Open in IMG/M |
| 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
| 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Host-Associated | Open in IMG/M |
| 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
| 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) | Host-Associated | Open in IMG/M |
| 3300006755 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter | Environmental | Open in IMG/M |
| 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
| 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Host-Associated | Open in IMG/M |
| 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
| 3300010397 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4 | Environmental | Open in IMG/M |
| 3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
| 3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
| 3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
| 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Host-Associated | Open in IMG/M |
| 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
| 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
| 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
| 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
| 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
| 3300019269 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300020069 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020076 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) | Environmental | Open in IMG/M |
| 3300020078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300021951 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300022718 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300024232 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05 | Environmental | Open in IMG/M |
| 3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027765 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes) | Environmental | Open in IMG/M |
| 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300030905 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031058 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031091 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031093 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Host-Associated | Open in IMG/M |
| 3300033412 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| INPgaii200_08902441 | 2228664022 | Soil | LSIEPQWLETRLKGSPVKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKTLDLDKLDKDCAPTAATSTFAVLDGGKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVT |
| INPhiseqgaiiFebDRAFT_1015854112 | 3300000364 | Soil | VKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKTLDLDKLDKDCAPTAATSTFAVLDGGKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIEVESVKGK* |
| JGI1027J11758_124490602 | 3300000789 | Soil | MAGMFAYAETWHGKLIDATCFEGFSTAASAGKKTLDLDKLDKDCAPTAATSTFAVLDGGKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIEVESVKGK* |
| Ga0062593_1035095932 | 3300004114 | Soil | IDSSCLERFSTAENGGKKPLDLDKLDKQCAPTPATSSFAVLDGDKIYKLDAAGSSKVMADIYGGAIKADHDRDVRVTVKGKKNGDTIMVESVKGK* |
| Ga0062590_1012517691 | 3300004157 | Soil | MKTTSKIGIVLCMAGVAGYAETWTGKLIDSSCLERFSTAESSGKKPLDVDKLDKQCAPTPATANFAVLDGDKIYKLDATGSSKVIADIYGGAIKADHDREVHVTVKGKKNGDTIAVESVKGK* |
| Ga0058860_105862891 | 3300004801 | Host-Associated | GLNPPLKGSPMKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK* |
| Ga0058860_111048981 | 3300004801 | Host-Associated | LNSIRGILMKTTSKIGIVLCMAGVAGYAETWTGKLIDSSCLERFSTAESSGKKPLDVDKLDKQCAPTPATANFAVLDGDKIYKLDATGSSKVIADIYGGAIKADHDREVHVTVKGKKNGDTIAVESVKGK* |
| Ga0070676_104342771 | 3300005328 | Miscanthus Rhizosphere | LCMAGVAGYAETWTGKLIDSSCLERFSTAESSGKKPLDVDKLDKQCAPTPATANFAVLDGDKIYKLDATGSSKVIADIYGGAIKADHDREVHVTVKGKKNGDTIAVESVKGK* |
| Ga0070683_1001042171 | 3300005329 | Corn Rhizosphere | LSIEPPWLETRLKGSPVKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK* |
| Ga0070683_1002541382 | 3300005329 | Corn Rhizosphere | MKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK* |
| Ga0070683_1003443171 | 3300005329 | Corn Rhizosphere | VKTTTKLGTILCMAGMLAYADTWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK* |
| Ga0068869_1020566641 | 3300005334 | Miscanthus Rhizosphere | LMKTTSKIGIVLCMAGVAGYAETWTGKLIDSSCLERFSTAESSGKKPLDVDKLDKQCAPTPATANFAVLDGDKIYKLDATGSSKVIADIYGGAIKADHDREVHVTVKGKKNGDTIAVESVKGK* |
| Ga0070666_104028112 | 3300005335 | Switchgrass Rhizosphere | MKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGQLHDGTIAVESVKGK* |
| Ga0070680_1006491381 | 3300005336 | Corn Rhizosphere | KTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK* |
| Ga0070682_1010543012 | 3300005337 | Corn Rhizosphere | ETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK* |
| Ga0070689_1005689802 | 3300005340 | Switchgrass Rhizosphere | MKTTTKLGLILCIAGVAGYAESWSGKLIDTSCLERFSTAANSGKKALDLDKIDKDCAPTAATTAFAVLDGDKIYKLDAKGNSKVLADIYGGAIKADHDKDVHVTVSGTKNGDTIMVDSVKGK* |
| Ga0070661_1017504831 | 3300005344 | Corn Rhizosphere | VKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK* |
| Ga0070673_1009570491 | 3300005364 | Switchgrass Rhizosphere | AESWSGKLIDTSCLERFSTAANSGKKALDLDKIDKDCAPTAATTAFAVLDGDKIYKLDAKGNSKVLADIYGGAIKADHDKDVHVTVSGTKNGDTIMVDSVKGK* |
| Ga0070688_1007102852 | 3300005365 | Switchgrass Rhizosphere | MKTTSKIGIVLCMAGVAGYAETWTGKLIDSSCLERFSTAESSGKKPLDVDKLDKQCAPTPATANFAVLDGDKIHKLDATGSSKVIADIYGGAIKADHDREVHVTVKGKKNGDTIAVESVKGK* |
| Ga0070714_1000826573 | 3300005435 | Agricultural Soil | MAGMLTYGETWHGKLIDASCFENFSTAANRKAPDLDKLDKDCAPTAATTSFAVLDNDKIYKLDAQGNSKVMAVIYGGAVKREHDRVKVTVSGKLHDGTIAVESVKGD* |
| Ga0070713_1000749602 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | MKTTTKLGIILCMAGVAAYAETWTGKLIDSSCLERFSTAESSGKKALDLDKLDKQCAPTPATANFAVLDGDKIYKLDAAGNSKVIADVYGGAIKADHDRDVHVTVKGKKNGDTIMVESVKGK* |
| Ga0070713_1015040441 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | VKTTTKLGTILCMAGMLTYGETWHGKLIDASCFENFSTAANRKAPDLDKLDKDCAPTAATTSFAVLDNDKIYKLDAQGNSKVMAVIYGGAVKREHDRVKVTVSGKLHDGTIAVESVKGD* |
| Ga0070701_111790251 | 3300005438 | Corn, Switchgrass And Miscanthus Rhizosphere | MKTTSKIGIVLCMAGVAGYAETWTGKLIDSSCLERFSTAESSGKKPLDVDKLDKQCAPTPATANFAVLDGDKIYKLDATGSSKVIADIYGGAIKADHDR |
| Ga0070694_1013461661 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | MNTTTKLGLILCMAGVASYAESWTGKLIDATCFERFSTAANSGKKALNLDKLDKDCAPTPATATFAVLDGEKIYKLDAKGNSKVLADIYGGAIKADHDKDVHVTVSGTKNGDTIMVENVKGK* |
| Ga0068867_1005484622 | 3300005459 | Miscanthus Rhizosphere | VKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTPATSRFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDKDVNVTASGKLNDGTIAVDSVKGK* |
| Ga0068867_1005689792 | 3300005459 | Miscanthus Rhizosphere | IASQSVGLRALNSIRGILMKTTSKIGIVLCMAGVAGYAETWTGKLIDSSCLERFSTAESSGKKPLDVDKLDKQCAPTPATANFAVLDGDKIYKLDATGSSKVIADIYGGAIKADHDREVHVTVKGKKNGDTIAVESVKGK* |
| Ga0070707_1022832581 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | MKTTTKLGIILCMAGVAGYAETWTGKLIDSSCLERFSTAESSGKKALDLDKLDKQCAPTPATANFAVLDGDKIYKLDAAGNSKVIADVYGGAIKADHDR |
| Ga0070679_1008943572 | 3300005530 | Corn Rhizosphere | VKTTTKLGTILCMAGMLTYGETWHGKLIDASCFENFSTAANRKAPDLDKLDKDCAPTAATTSFAVLDNDKIYKLDAQGNSKVMAVIYGGAVKREHDRVKVTVSGKLHD |
| Ga0068853_1021642162 | 3300005539 | Corn Rhizosphere | LCMAGMLTYGETWHGKLIDASCFENFSTAANRKAPDLDKLDKDCAPTAATTSFAVLDNDKIYKLDAQGNSKVMAVIYGGAVKREHDRVKVTVSGKLHDGTIAVESVKGD* |
| Ga0070695_1009665881 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | KTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSRFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLNDGTIAVDSVKGK* |
| Ga0070696_1012112641 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | MRNTTKLGVVLCMAGVVSYAESWSGKLIDTSCLDRFSTAASSGKKALDLDKLDKQCAPTAATTSFAVLDGDKIYKLDATGNSKVMANIYGGAVKADHDKDVHVTVTGKKNGDTIMVDSVKGK* |
| Ga0070664_1010306902 | 3300005564 | Corn Rhizosphere | VKTTTKLGTILCMAGVFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK* |
| Ga0068857_1015354972 | 3300005577 | Corn Rhizosphere | SSVKTTTKLGTILCMAGMLTYGETWHGKLIDASCFENFSTAANRKAPDLDKLDKDCAPTAATTSFAVLDNDKIYKLDAQGNSKVMAVIYGGAVKREHDRVKVTVSGKLHDGTIAVESVKGD* |
| Ga0068864_1003346842 | 3300005618 | Switchgrass Rhizosphere | VKTTTKLGTILCMSGMLASAETWHGKLIDATCFEGFSTAASAGRKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAIKADHDRDVKVTVSGKLHDGTIAVESVKK* |
| Ga0068864_1006290202 | 3300005618 | Switchgrass Rhizosphere | AGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK* |
| Ga0068866_102661251 | 3300005718 | Miscanthus Rhizosphere | VWQRDCLLSIEPPWLETRLKGSPVKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTPATSRFAVLDGDKIYKLDAQGNSKVLAVIYVGAVKADHDKDVNVTVSGKLNDGTIAVDSVKGK* |
| Ga0068863_1001429273 | 3300005841 | Switchgrass Rhizosphere | AYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK* |
| Ga0068858_1003429342 | 3300005842 | Switchgrass Rhizosphere | MKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVT |
| Ga0068860_1009751201 | 3300005843 | Switchgrass Rhizosphere | MKTTTKLGLILCIAGVAAYAESWSGKLIDTSCLDRFSTAANSGKKALDLDKIDKDCAPTSATTAFAVLDGDKIYKLDAKGNSKVLADIYGGAIKADHDKDVHVTVSGTKNGDTIMVDSVKGK* |
| Ga0097621_1007738522 | 3300006237 | Miscanthus Rhizosphere | MKTITKLGIVFCMAGVASYAETWTGKLIDSSCLERFSTAESSGRKPLDLDKLDKQCAPTPATANFAVLDGDKIYKLDAAGSSKVMADIYGGAIKADHDREVRVTVKGKKNGDTIMVESVKGK* |
| Ga0079222_100181231 | 3300006755 | Agricultural Soil | MKTVGKLGIILGLASMAAYAETWDGKLIDATCFENFSSSATDGRKAPDLDKLDKDCAPTPGTTTFAVIDHGKVYKLDAIGNTKVAADVYGGAVKPDKDRDVHVTIKGKLQGDTIVVESVKGK* |
| Ga0068865_1000641582 | 3300006881 | Miscanthus Rhizosphere | VKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTPATSRFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDKDVNVTVSGKLNDGTIAVDSVKGK* |
| Ga0105240_110345491 | 3300009093 | Corn Rhizosphere | MAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK* |
| Ga0105245_100921424 | 3300009098 | Miscanthus Rhizosphere | MKTINKLGIVLCVAGVAGYAETWTGKLIDSSCFERFSTAESNGKKPLDLDKLDKQCAPTPATANFAVLDGDKIYKLDAAGSSKVMADIFGGAIKADHDREVHVTVKGKKNGDTIAVESVKGK* |
| Ga0105245_112832282 | 3300009098 | Miscanthus Rhizosphere | MKTTTKLGVILCLAGVAGYAETWNGKLIDASCLERFSTAASSGKKALDLDKLDKQCAPTAATANFAVLDGDKIYKLDSTGNSKVMADVYGGAIKADHDKDVHVTVKGTKNGDTIAVESVKGK* |
| Ga0105247_111806532 | 3300009101 | Switchgrass Rhizosphere | SCLERFSTAESSGKKPLDVDKLDKQCAPTPATANFAVLDGDKIYKLDATGSSKVIADIYGGAIKADHDREVHVTVKGKKNGDTIAVESVKGK* |
| Ga0105243_101812852 | 3300009148 | Miscanthus Rhizosphere | MAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTPATSRFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDKDVNVTVSGKLNDGTIAVDSVKGK* |
| Ga0105242_101900372 | 3300009176 | Miscanthus Rhizosphere | MAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTPATSRFAVLDGDKIYKLDAQGNSKVLAVIYGGAVKADHDRDVNVTVSGKLNDGTIAVESVKGK* |
| Ga0105248_116512022 | 3300009177 | Switchgrass Rhizosphere | AGYAESWTGKLIDSSCFERFSTAESSGKKPLDLDKLDKQCAPTPATANFAVLDGDKIYKLAAAGSSKVMADIYGGAIKSDHDREVRVTVKGKKNGDTIMVESVKGK* |
| Ga0105237_118630421 | 3300009545 | Corn Rhizosphere | TILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK* |
| Ga0105238_114973901 | 3300009551 | Corn Rhizosphere | MAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTPATSRFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLNDGTIAVDSVKGK* |
| Ga0105239_107783712 | 3300010375 | Corn Rhizosphere | MAGVVSYAESWSGKLIDTSCLDRFSTAASSGKKALDLDKLDKQCAPTAATTSFAVLDGDKIYKLDATGNSKVMANIYGGAVKADHDKDVHVTVTGKKNGDTIMVDSVKGK* |
| Ga0134124_124790972 | 3300010397 | Terrestrial Soil | MKTTSKLAIVLCLASVATYAETWTGKLIDSSCLERFSTAENSGKKALDLDKLDKQCAPTPATASFAVLDGDKIYKLDAAGSSKVIADIYGGAIKADHDKDVHVTVKGKKSGDTII |
| Ga0134127_110757661 | 3300010399 | Terrestrial Soil | KTTTKLGLILCIAGVAGYAESWSGKLIDTSCLERFSTAANSGKKALDLDKIDKDCAPTAATTAFAVLDGDKIYKLDAKGNSKVLADIYGGAIKADHDKDVHVTVSGTKNGDTIMVDSVKGK* |
| Ga0134123_101714802 | 3300010403 | Terrestrial Soil | MAGVAGYAETWTGKLIDSSCLERFSTAESSGKKPLDVDKLDKQCAPTPATANFAVLDGDKIYKLDATGSSKVIADIYGGAIKADHDREVHVTVKGKKNGDTIAVESVKGK* |
| Ga0150985_1002637092 | 3300012212 | Avena Fatua Rhizosphere | MAGMLASAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK* |
| Ga0157369_119086442 | 3300013105 | Corn Rhizosphere | WHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK* |
| Ga0163162_109338212 | 3300013306 | Switchgrass Rhizosphere | MAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSRFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDKDVNVTVSGKLNDGTI |
| Ga0163162_117360591 | 3300013306 | Switchgrass Rhizosphere | MKTTTKLGLILCIAGVAGYAESWSGKLIDTSCLERFSTAANSGKKALDLDKIDKDCAPTAATTAFAVLDGDKIYKLDAKGNSKVLADIYGGAIKADHDKDVHV |
| Ga0163163_107927741 | 3300014325 | Switchgrass Rhizosphere | GVAAYAESWSGKLIDTSCLDRFSTAANSGKKALDLDKIDKDCAPTSATTAFAVLDGDKIYKLDAKGNSKVLADIYGGAIKADHDKDVHVTVSGTKNGDTIMVDSVKGK* |
| Ga0157379_104954252 | 3300014968 | Switchgrass Rhizosphere | MKTTSKLAIVFCLAGAAAYAETWTGKLIDSSCLERFSTAQNSGKKALDLDKLDKQCAPTPATSSFAVLDGDKIYKLDSTGNSKVMADVYGGAIKADHDRDVHVTVTGKKNGDTIMVESVKGK* |
| Ga0157376_116472971 | 3300014969 | Miscanthus Rhizosphere | MAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTPATSRFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK* |
| Ga0163161_117022221 | 3300017792 | Switchgrass Rhizosphere | SVGLRALNSIRGILMKTTSKIGIVLCMAGVAGYAETWTGKLIDSSCLERFSTAESSGKKPLDVDKLDKQCAPTPATANFAVLDGDKIYKLDATGSSKVIADIYGGAIKADHDREVHVTVKGKKNGGTIAVESVKGK |
| Ga0184644_11067992 | 3300019269 | Groundwater Sediment | MKTINKLGIVFCMAGVAGYAETWTGKLIDSSCLERFSTADNSGKKPLDVDKLDKQCAPTPATANFAVLDGDKIYKLDATGSSKVMADIYGGAIKADHDREVHVTVKGKKNGDTIAVESVKGK |
| Ga0197907_100800651 | 3300020069 | Corn, Switchgrass And Miscanthus Rhizosphere | VKTTTKLGTILCMAGMLTYGETWHGKLIDASCFENFSTAANRKAPDLDKLDKDCAPTAATTSFAVLDNDKIYKLDAQGNSKVMAVIYGGAVKREHDRVKVTVSGKLHDGTIAVESVKGD |
| Ga0206356_100076432 | 3300020070 | Corn, Switchgrass And Miscanthus Rhizosphere | CMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK |
| Ga0206356_103060911 | 3300020070 | Corn, Switchgrass And Miscanthus Rhizosphere | LETRLKGSPVKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK |
| Ga0206355_14029692 | 3300020076 | Corn, Switchgrass And Miscanthus Rhizosphere | KTTTKLGTILCMAGMLTYGETWHGKLIDASCFENFSTAANRKAPDLDKLDKDCAPTAATTSFAVLDNDKIYKLDAQGNSKVMAVIYGGAVKREHDRVKVTVSGKLHDGTIAVESVKGD |
| Ga0206352_106180371 | 3300020078 | Corn, Switchgrass And Miscanthus Rhizosphere | LENLSEGITMKTTSKLAIVFCLAGAAAYAETWTGKLIDSSCLERFSTAQNSGKKALDLDKLDKQCAPTPATSSFAVLDGDKIYKLDSTGNSKVMADVYGGAIKADHDRDVHVTVTGKKNGDTIMVESVKGK |
| Ga0206353_102742351 | 3300020082 | Corn, Switchgrass And Miscanthus Rhizosphere | WLETRLKGSPVKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK |
| Ga0222624_11550382 | 3300021951 | Groundwater Sediment | ETRLKGSPVKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTPATSRFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTISGKRNDGTIAVDSVKGK |
| Ga0222624_13656542 | 3300021951 | Groundwater Sediment | MKTINKLGIVFCMAGVAGYAETWTGKLIDSSCLERFSTADNSGKKPLDLDKLDKQCAPTPATANFAVLDGDKIYKLDATGSSKVMADIYGGAIKADHDREVHVTVKGKKNGDTIAVESVKGK |
| Ga0224712_106014002 | 3300022467 | Corn, Switchgrass And Miscanthus Rhizosphere | TMKTASKLAIVFCLAGVATYAETWTGKLIDSSCLERFSTAENGGKKPLDLDKLDKQCAPTPATSSFAVLDGDKIYKLDAAGSSKVMADIYGGAIKADHDRDVRVTVKGKKNGDTIMVESVKGK |
| Ga0242675_10669842 | 3300022718 | Soil | ITMKTTSKLAIVFCLAGVATYAETWNGKLIDSSCFERFSTADNSGRHALDLDKLDKQCAPTPATSSFAVLDHDKIYKLDSAGSSKVLADIYGGAIKPDHDKDVHVTVKGTKNGDTIIVESVKGK |
| Ga0247664_11797071 | 3300024232 | Soil | NHRMKTTTKLGIILCMAGVAGYAETWTGKLIDSSCLERFSTAESSGKKALDLDKLDKQCAPTPATANFAVLDGDKIYKLDAAGNSKVIADVYGGAIKADHDRDVHVTVKGKKNGDTIMVESVKGK |
| Ga0207697_103314881 | 3300025315 | Corn, Switchgrass And Miscanthus Rhizosphere | MKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGT |
| Ga0207645_107405501 | 3300025907 | Miscanthus Rhizosphere | GIVLCMAGVAGYAETWTGKLIDSSCLERFSTAESSGKKPLDVDKLDKQCAPTPATANFAVLDGDKIYKLDATGSSKVIADIYGGAIKADHDREVHVTVKGKKNGDTIAVESVKGK |
| Ga0207643_106520132 | 3300025908 | Miscanthus Rhizosphere | MKTTSKIGIVLCMAGVAGYAETWTGKLIDSSCLERFSTAESSGKKPLDVDKLDKQCAPTPATANFAVLDGDKIYKLDATGSSKVIADIYGGAIKADHDREVHVTVKGKKNGDTIAVESVKGK |
| Ga0207671_103189222 | 3300025914 | Corn Rhizosphere | MKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAATAGRKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK |
| Ga0207657_102712372 | 3300025919 | Corn Rhizosphere | MKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK |
| Ga0207686_103774381 | 3300025934 | Miscanthus Rhizosphere | VKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTPATSRFAVLDGDKIYKLDAQGNSKVLAVIYGGAVKADHDRDVNVTVSGKLNDGTIAVESVKGK |
| Ga0207670_102831852 | 3300025936 | Switchgrass Rhizosphere | TWTGKLIDSSCLERFSTAESSGKKPLDVDKLDKQCAPTPATANFAVLDGDKIYKLDATGSSKVIADIYGGAIKADHDREVHVTVKGKKNGDTIAVESVKGK |
| Ga0207670_118431262 | 3300025936 | Switchgrass Rhizosphere | ILCIAGVAGYAESWSGKLIDTSCLERFSTAANSGKKALDLDKIDKDCAPTAATTAFAVLDGDKIYKLDAKGNSKVLADIYGGAIKADHDKDVHVTVSGTKNGDTIMVDSVKGK |
| Ga0207704_114518271 | 3300025938 | Miscanthus Rhizosphere | VKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTPATSRFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDKDVNV |
| Ga0207711_105616682 | 3300025941 | Switchgrass Rhizosphere | MKTTSKIGIVLCMAGVAGYAETWTGKLIDSSCLERFSTAESSGRKPLDLDKLDKQCAPTPATANFAVLDGDKIYKLAAAGSSKVMADIYGGAIKADHDREVRVTVKGKKNGDTIMVESVKGK |
| Ga0207711_106683622 | 3300025941 | Switchgrass Rhizosphere | MKTTTKLGLILCIAGVAGYAESWSGKLIDTSCLERFSTAANSGKKALDLDKIDKDCAPTAATTAFAVLDGDKIYKLDAKGNSKVLADIYGGAIKADHDKDVHVTVSGTKNGDTIMVDSVKGK |
| Ga0207711_107971732 | 3300025941 | Switchgrass Rhizosphere | GKLIDSSCLERFSTAESSGKKPLDVDKLDKQCAPTPATANFAVLDGDKIYKLDATGSSKVIADIYGGAIKADHDREVHVTVKGKKNGDTIAVESVKGK |
| Ga0207658_119579861 | 3300025986 | Switchgrass Rhizosphere | VKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAIKADHDRDVKVTVSGKLHDGTIAVESV |
| Ga0207703_104871341 | 3300026035 | Switchgrass Rhizosphere | MKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLNDGTIAVDSVKGK |
| Ga0207641_103409912 | 3300026088 | Switchgrass Rhizosphere | ETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK |
| Ga0207648_104587652 | 3300026089 | Miscanthus Rhizosphere | LIASQSVGLRALNSIRGILMKTTSKIGIVLCMAGVAGYAETWTGKLIDSSCLERFSTAESSGKKPLDVDKLDKQCAPTPATANFAVLDGDKIYKLDATGSSKVIADIYGGAIKADHDREVHVTVKGKKNGDTIAVESVKGK |
| Ga0207648_111037842 | 3300026089 | Miscanthus Rhizosphere | VKTTTKLGTILCMAGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTPATSRFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLNDGTIAVDSVKGK |
| Ga0207676_100947321 | 3300026095 | Switchgrass Rhizosphere | AGMFAYAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK |
| Ga0207676_120972811 | 3300026095 | Switchgrass Rhizosphere | MKTTTKLGLILCIAGVAAYAESWSGKLIDTSCLERFSTAANSGKKALDLDKIDKDCAPTAATTAFAVLDGDKIYKLDAKGNSKVLADIYGGAIKADHDKDVHVTVSGTKNGDTIMVDSVKGK |
| Ga0207675_1003195532 | 3300026118 | Switchgrass Rhizosphere | SVGLRALNSIRGILMKTTSKIGIVLCMAGVAGYAETWTGKLIDSSCLERFSTAESSGKKPLDVDKLDKQCAPTPATANFAVLDGDKIYKLDATGSSKVIADIYGGAIKADHDREVHVTVKGKKNGDTIAVESVKGK |
| Ga0209073_100456202 | 3300027765 | Agricultural Soil | MKTVGKLGIILGLASMAAYAETWDGKLIDATCFENFSSSATDGRKAPDLDKLDKDCAPTPGTTTFAVIDHGKVYKLDAIGNTKVAADVYGGAVKPDKDRDVHVTIKGK |
| Ga0268264_106768891 | 3300028381 | Switchgrass Rhizosphere | MKTTTKLGLILCIAGVAAYAESWSGKLIDTSCLDRFSTAANSGKKALDLDKIDKDCAPTSATTAFAVLDGDKIYKLDAKGNSKVLADIYGGAIKADHDKDVHVTVSGTKNGDTIMVDSVKGK |
| Ga0308200_10882981 | 3300030905 | Soil | HKTRLKGSPVKTTTKLGTILCMAGMLASAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK |
| Ga0308189_102691181 | 3300031058 | Soil | PIEGIPMKTINKLGMVLCMASVAGYAETWTGKLIDSSCFERFSTAESSGKKPLDLDKLDKQCAPTPATANFAVLDGDKIYKLDATGSSKVMADIYGGAIKADHDREVHVTVKGKKNGDTIAVESVKGK |
| Ga0308189_103007682 | 3300031058 | Soil | KTRLKGSPVKTTTKLGTILCMAGMLASAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK |
| Ga0308189_103698571 | 3300031058 | Soil | INKLGIVFCMAGVAGYAETWTGKLIDSSCLERFSTADNSGKKPLDLDKLDKQCAPTPATANFAVLDGDKIYKLDATGSSKVMADIYGGAIKADHDREVHVTVKGKKNGDTIAVESVKGK |
| Ga0308189_104255872 | 3300031058 | Soil | RLKGSPVKTTTKLGTILCMAGMLTYAETWHGKLIDATCFERFSTAASSGKKAPDLDKLDKDCAPTAATTTFAVLDHDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVDVTVSGKLNDGTIVVDSVKGK |
| Ga0308201_101971921 | 3300031091 | Soil | LKTRLKGSPVKTTTKLGTILCMAGMLASAETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIAVESVKGK |
| Ga0308197_100721511 | 3300031093 | Soil | RILTEGITMKTISKLAIVFCLAGVATYAETWTGKLIDSSCFERFSTAESSGKKPLDLDKLDKQCAPTPATANFAVLDGDKIYKLDATGSSKVMADIYGGAIKADHDREVHVTVKGKKNGDTIAVESVKGK |
| Ga0308197_101065662 | 3300031093 | Soil | LETRLKGSPVKTTTKLGTILCVAGMLAYGETWHGKLIDATCFEGFSTAASAGKKAPDLDKLDKDCAPTAATSRFAVLDGEKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLNDGTIEVESVKGK |
| Ga0308197_103896381 | 3300031093 | Soil | ETRLKGSPVKTTTKLGTVLCVAGMLAYAETWHGKLIDATCFEGFSTAASAGKKAPDLNKLDKDCAPTAATNTFAVLDGDKIYKLDAPGNSKVLAVIYGGAVKADHDRDVNVTVSGKLHDGTIEVESVKGK |
| Ga0265313_100195595 | 3300031595 | Rhizosphere | TYAETWNGKLIDASCLERFSTADNSGKKPLDLNKLDKECAPTPATTNFAVLDGDKVYKLDAAGSSKVMADIYGGAIKADHDRDVHVTVKGKKNGDTIMVESVKGK |
| Ga0310810_100018901 | 3300033412 | Soil | MKTITKLGIVFCMAGVAGYAETWTGKLIDSSCLERFSTADNSGKKPLDLDKLDKQCAPTPATTNFAVLDGDKIYKLDAAGSSKVMADIYGGAIKADHDREVHVTVKGKKNGDTIMVESVKGK |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |