Metagenome / Metatranscriptome Family F090553

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090553
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	90 residues
Representative Sequence	MHQDGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKGTAA
Number of Associated Samples	92
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.19 %
% of genes near scaffold ends (potentially truncated)	90.74 %
% of genes from short scaffolds (< 2000 bps)	82.41 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere (7.407 % of family members)
Environment Ontology (ENVO)	Unclassified (55.556 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (75.926 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.03% β-sheet: 18.97% Coil/Unstructured: 75.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00027	cNMP_binding	11.11
PF13545	HTH_Crp_2	6.48
PF02771	Acyl-CoA_dh_N	4.63
PF08028	Acyl-CoA_dh_2	1.85
PF02423	OCD_Mu_crystall	1.85
PF12974	Phosphonate-bd	0.93
PF00072	Response_reg	0.93
PF00004	AAA	0.93
PF00011	HSP20	0.93
PF13637	Ank_4	0.93
PF07589	PEP-CTERM	0.93
PF01527	HTH_Tnp_1	0.93
PF00691	OmpA	0.93
PF00082	Peptidase_S8	0.93
PF00589	Phage_integrase	0.93
PF13683	rve_3	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	6.48
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	1.85
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	82.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	71.30 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	71.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	50.00 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	21.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	50.00 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	6.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.56 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.85 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	50.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.56 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	3.70 %
Granulicella tundricola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	1.85 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|F0B48LX02JXJUU	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	505	Open in IMG/M
3300004114\|Ga0062593_102655231	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	569	Open in IMG/M
3300004643\|Ga0062591_100481775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1058	Open in IMG/M
3300004799\|Ga0058863_10670503	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	639	Open in IMG/M
3300005093\|Ga0062594_101109831	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	774	Open in IMG/M
3300005178\|Ga0066688_10398759	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	892	Open in IMG/M
3300005179\|Ga0066684_10730089	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	661	Open in IMG/M
3300005295\|Ga0065707_11116307	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	512	Open in IMG/M
3300005328\|Ga0070676_10036026	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	2848	Open in IMG/M
3300005335\|Ga0070666_10154192	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1603	Open in IMG/M
3300005337\|Ga0070682_101940776	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	516	Open in IMG/M
3300005338\|Ga0068868_100090885	All Organisms → cellular organisms → Bacteria	2459	Open in IMG/M
3300005339\|Ga0070660_100461234	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1055	Open in IMG/M
3300005344\|Ga0070661_101089575	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300005344\|Ga0070661_101195688	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	636	Open in IMG/M
3300005347\|Ga0070668_100026942	All Organisms → cellular organisms → Bacteria → Acidobacteria	4362	Open in IMG/M
3300005356\|Ga0070674_100049317	All Organisms → cellular organisms → Bacteria	2894	Open in IMG/M
3300005367\|Ga0070667_100008621	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8450	Open in IMG/M
3300005435\|Ga0070714_101713134	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	614	Open in IMG/M
3300005437\|Ga0070710_10857199	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	653	Open in IMG/M
3300005440\|Ga0070705_100059699	All Organisms → cellular organisms → Bacteria	2259	Open in IMG/M
3300005444\|Ga0070694_100105516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2000	Open in IMG/M
3300005456\|Ga0070678_100387455	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1211	Open in IMG/M
3300005458\|Ga0070681_10277948	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1585	Open in IMG/M
3300005458\|Ga0070681_11131839	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	704	Open in IMG/M
3300005466\|Ga0070685_10571329	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	810	Open in IMG/M
3300005534\|Ga0070735_10883837	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	525	Open in IMG/M
3300005539\|Ga0068853_101421723	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	671	Open in IMG/M
3300005544\|Ga0070686_100151015	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300005547\|Ga0070693_100126304	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300005558\|Ga0066698_11076254	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	509	Open in IMG/M
3300005564\|Ga0070664_101398239	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	662	Open in IMG/M
3300005575\|Ga0066702_10951024	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	513	Open in IMG/M
3300005577\|Ga0068857_100624020	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1020	Open in IMG/M
3300005578\|Ga0068854_100823450	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300005614\|Ga0068856_100036148	All Organisms → cellular organisms → Bacteria → Acidobacteria	4843	Open in IMG/M
3300005614\|Ga0068856_101791148	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	626	Open in IMG/M
3300005614\|Ga0068856_102273696	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	550	Open in IMG/M
3300005615\|Ga0070702_100018565	All Organisms → cellular organisms → Bacteria → Acidobacteria	3610	Open in IMG/M
3300005615\|Ga0070702_101686736	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	526	Open in IMG/M
3300005618\|Ga0068864_102142639	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	565	Open in IMG/M
3300005719\|Ga0068861_100106650	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	2238	Open in IMG/M
3300006034\|Ga0066656_10295209	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1045	Open in IMG/M
3300006237\|Ga0097621_100075421	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	2795	Open in IMG/M
3300006358\|Ga0068871_100300059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1410	Open in IMG/M
3300006358\|Ga0068871_100791594	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	873	Open in IMG/M
3300006800\|Ga0066660_11048445	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	651	Open in IMG/M
3300006854\|Ga0075425_101321402	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300006903\|Ga0075426_11543692	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	505	Open in IMG/M
3300009093\|Ga0105240_11361872	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	747	Open in IMG/M
3300009101\|Ga0105247_10675085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	775	Open in IMG/M
3300009148\|Ga0105243_11321900	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	739	Open in IMG/M
3300009174\|Ga0105241_11151482	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	732	Open in IMG/M
3300009174\|Ga0105241_11700137	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	613	Open in IMG/M
3300009177\|Ga0105248_10680083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1161	Open in IMG/M
3300009177\|Ga0105248_10929514	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	982	Open in IMG/M
3300009551\|Ga0105238_11399854	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	727	Open in IMG/M
3300009553\|Ga0105249_10084638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2954	Open in IMG/M
3300010371\|Ga0134125_12102212	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	614	Open in IMG/M
3300010373\|Ga0134128_10844079	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300010373\|Ga0134128_11050055	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	900	Open in IMG/M
3300010373\|Ga0134128_11560000	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300010396\|Ga0134126_12517610	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	559	Open in IMG/M
3300010397\|Ga0134124_12665382	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	543	Open in IMG/M
3300010400\|Ga0134122_12085996	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	607	Open in IMG/M
3300010401\|Ga0134121_10741440	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	936	Open in IMG/M
3300012203\|Ga0137399_10842757	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	772	Open in IMG/M
3300012208\|Ga0137376_10565703	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300012285\|Ga0137370_10130872	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1438	Open in IMG/M
3300012351\|Ga0137386_10172082	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1552	Open in IMG/M
3300012989\|Ga0164305_10927715	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	734	Open in IMG/M
3300013105\|Ga0157369_10213075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2024	Open in IMG/M
3300013296\|Ga0157374_10687397	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1036	Open in IMG/M
3300013306\|Ga0163162_13206745	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	525	Open in IMG/M
3300013307\|Ga0157372_10582435	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1304	Open in IMG/M
3300013307\|Ga0157372_11245725	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300013307\|Ga0157372_12574540	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	584	Open in IMG/M
3300014325\|Ga0163163_10827052	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300014497\|Ga0182008_10028840	All Organisms → cellular organisms → Bacteria	2806	Open in IMG/M
3300014969\|Ga0157376_12399864	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	567	Open in IMG/M
3300015373\|Ga0132257_102610548	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300018027\|Ga0184605_10253727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300018432\|Ga0190275_10789091	All Organisms → cellular organisms → Bacteria → Acidobacteria	1013	Open in IMG/M
3300019877\|Ga0193722_1062940	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	927	Open in IMG/M
3300020018\|Ga0193721_1112651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	689	Open in IMG/M
3300021168\|Ga0210406_10127024	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2152	Open in IMG/M
3300021445\|Ga0182009_10045431	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1835	Open in IMG/M
3300025315\|Ga0207697_10263132	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	764	Open in IMG/M
3300025898\|Ga0207692_10180744	All Organisms → cellular organisms → Bacteria → Acidobacteria	1229	Open in IMG/M
3300025903\|Ga0207680_10262228	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1196	Open in IMG/M
3300025912\|Ga0207707_11002293	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	685	Open in IMG/M
3300025912\|Ga0207707_11224800	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	606	Open in IMG/M
3300025925\|Ga0207650_10476313	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300025927\|Ga0207687_10116597	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1991	Open in IMG/M
3300025929\|Ga0207664_10618583	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	973	Open in IMG/M
3300025929\|Ga0207664_11344645	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	634	Open in IMG/M
3300025933\|Ga0207706_10009258	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9050	Open in IMG/M
3300025936\|Ga0207670_11766000	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	526	Open in IMG/M
3300025939\|Ga0207665_11060864	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	645	Open in IMG/M
3300025945\|Ga0207679_10673180	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	937	Open in IMG/M
3300025986\|Ga0207658_10372823	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1248	Open in IMG/M
3300026078\|Ga0207702_10035096	All Organisms → cellular organisms → Bacteria	4193	Open in IMG/M
3300026078\|Ga0207702_10693228	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1003	Open in IMG/M
3300026089\|Ga0207648_10023795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5479	Open in IMG/M
3300026089\|Ga0207648_10303506	All Organisms → cellular organisms → Bacteria → Acidobacteria	1432	Open in IMG/M
3300028379\|Ga0268266_10100376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2549	Open in IMG/M
3300031716\|Ga0310813_11622128	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300033412\|Ga0310810_11017003	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	705	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	51.85%
Environmental	Environmental	48.15%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.93%
Terrestrial	Environmental → Terrestrial	47.22%
Aquatic	Environmental → Aquatic	0.93%
Human	Host-Associated → Human	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.74%
Roots	Host-Associated → Plants → Roots	3.70%
Sediment	Environmental → Aquatic → Sediment	0.93%
Digestive System	Host-Associated → Human → Digestive System	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.63%
Loam	Environmental → Terrestrial → Soil → Loam	17.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.48%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.93%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	7.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.41%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	7.41%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_05879080	2170459002	Grass Soil	SHQNDSAPVWIPRNGKDSKGIPYIVITCTECLRSFPLNVTTEQNPEVLETQCLFCSNTVRYIIDFSLSVFSPTKVKTTPVLTGNSTAA
Ga0062593_1026552311	3300004114	Soil	WIPRNGKDSNGIPYIVITCTECLRSFPLNVTSEENPEVLETQCLFCSNTVRYIVDFSLSVFSPTKVKATPVITRKDTAA*
Ga0062591_1004817752	3300004643	Soil	GKDSNGIPYIVITCTECLRSFALNVTQEESPEVLETQCLFCSNPVRYIIDFSLSVFSPKKAMSARPIKPKGTAACSAAPCGVADESDR*
Ga0058863_106705031	3300004799	Host-Associated	SHHNASAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTAEENPEVLETECLFCSNTVRYIIDFSLSVFSPTKVKITPVITRSNTAA*
Ga0062594_1011098312	3300005093	Soil	PVWIPRNGKDSNGIPYIVITCTECLRSFPLNVAKEENAEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKGTAA*
Ga0066688_103987592	3300005178	Soil	LATVAGLIRTSASRANVHQQEQAPVWIPRNGKDSNGIPYIVLTCTECLRSFPLNVSHETIPEVLETPCLFCPNTVRYIIDFSLSVVSPKAVSDLRRLPA*
Ga0066684_107300892	3300005179	Soil	SVAALIQTSNEQASAHQSGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVRTEENPEVLETPCPFCLNTVKYIIDFSLSVFSPTKAEPTPVISGRDMA*
Ga0065707_111163071	3300005295	Switchgrass Rhizosphere	CAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAAPVITRKGTAP*
Ga0070676_100360263	3300005328	Miscanthus Rhizosphere	LAFWIPRNGKDSNGIPYIVITCTECLRSFPLNVAKEENAEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKGTAA*
Ga0070666_101541921	3300005335	Switchgrass Rhizosphere	MDPLRECRMHQDGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKGTAA*
Ga0070682_1019407761	3300005337	Corn Rhizosphere	SAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVSSPRKAHAAPLIRRKGTAA*
Ga0068868_1000908852	3300005338	Miscanthus Rhizosphere	MHQDGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKGTAA*
Ga0070660_1004612342	3300005339	Corn Rhizosphere	APVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENAEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKGTAA*
Ga0070661_1010895752	3300005344	Corn Rhizosphere	APVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTAEENPEVLETECLFCSNTVRYIIDFSLSVFSPTKVKITPVITRSNTAA*
Ga0070661_1011956881	3300005344	Corn Rhizosphere	RNGKDSNGIPYIVITCTECLRSFALNVTQEESPEVLETQCLFCSNPVRYIIDFSLSVFSPKKAMSARPIKPKGTAA*
Ga0070668_1000269422	3300005347	Switchgrass Rhizosphere	LAFWIPRNGKDSNGIPYIVITCTECLRSFPLNVAKEENAEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKDTAA*
Ga0070674_1000493172	3300005356	Miscanthus Rhizosphere	MHQDGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVEYIIDFSLSVFSPTKAKAARVITRKGTAA*
Ga0070667_10000862110	3300005367	Switchgrass Rhizosphere	MDPLRECRMHQDGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAAPVITRKGTAP*
Ga0070714_1017131341	3300005435	Agricultural Soil	SAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVRTEENPEVLETPCPFCSSTVKYIIDFSLSVFSPAKAEPTPVISRKDKAA*
Ga0070710_108571992	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	AETLLSSVAALIQTSATQASAHQNGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTTEENPEVLETQCLFCSNTVKYIIDFSLSVFSPTKVKATPVITRKDTAA*
Ga0070705_1000596993	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	PDALLNSVASLIETSGEQASAHQSGSAPVWIPRNGQDSNGIPYIVITCTECLRSFPLNVTTEENPEVLETPCPFCLNTVKYIIDFSLSVFSPTKVKPTPVVSRKDSLA*
Ga0070694_1001055161	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	RNGQDSNGIPYIVITCTECLRSFPLNVTTEENPEVLETPCPFCLNTVKYIIDFSLSVFSPTKVKPTPVVSRKDSLA*
Ga0070678_1003874552	3300005456	Miscanthus Rhizosphere	MHQDGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLS
Ga0070681_102779481	3300005458	Corn Rhizosphere	NGKDSNGIPYIVITCTECLRSFPLNVTTEENPEVLKTPCLFCSNMVKYIIDFSLSVFSPAKIKAVPVITLKGSNF*
Ga0070681_111318391	3300005458	Corn Rhizosphere	ALIQTSATQASSHQNGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTTEENPEVLETQCLFCSNTVRYIIDFSLSVFSPTKVKAAPVITGRGTAA*
Ga0070685_105713291	3300005466	Switchgrass Rhizosphere	CAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVAKEENAEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKGTAA*
Ga0070735_108838371	3300005534	Surface Soil	DTLLNSVATLIQTSTEQASAHQCGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETPCPFCLNTVKYIIDFSLSVFSPTKVKLVPVISRKDTAR*
Ga0068853_1014217232	3300005539	Corn Rhizosphere	QDSAEMLLSSVAALFQTSATQARSHRDTSAPVWIPRNGKDSSGIPYIVITCTECLRSFPLNVTTEENPEVLKTPCLFCSNMVKYIIDFSLSVFSPAKIKAVPVITLKGSNF*
Ga0070686_1001510152	3300005544	Switchgrass Rhizosphere	GSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKDTAA*
Ga0070693_1001263041	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	SVAALIETSAQQASSHHNASAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTAEENPEVLETECLFCSNTVRYIIDFSLSVFSPTKVKITPVITRSNTAA*
Ga0066698_110762542	3300005558	Soil	IQTSATQARSHQNGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTTEENPEVLETRCLFCSNTVKYIIDFSLSVFSPTKINAFPVITQKGTAA*
Ga0070664_1013982391	3300005564	Corn Rhizosphere	HQDGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVSSPRKAHAAPLIRRKGTAA*
Ga0066702_109510241	3300005575	Soil	RAHQEESAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEDDSEVLETLCLFCSNTVKYIIDFSLSVTSPPKALSPSIRAPGTGVSSRLLANP*
Ga0068857_1006240203	3300005577	Corn Rhizosphere	VAALIQTSATQARSHRDTSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLHVSTEENPEVLKTPCLFCSNTVKYIIDFSLSVFSPTKVKATPVVTGRGTAA*
Ga0068854_1008234502	3300005578	Corn Rhizosphere	RNGKDSNGIPYIVITCTECLRSFPLNVTGEENPEVLETPCLFCSNAVRYIIDFSLSVFSPTKVKATPVITRKTVA*
Ga0068856_1000361489	3300005614	Corn Rhizosphere	IQTSATQARSHRDTSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLHVTTEENPEVLKTQCLFCSNKVRYIIDFSLSVFSPTKMKAAPIITLKGSTGVA*
Ga0068856_1017911482	3300005614	Corn Rhizosphere	NGIPYIVITCTECLRSFPLNVTKEENPEVLETPCPFCLNTVKYIIDFSLSVFSPTKIKPIPVISQKDTRRA*
Ga0068856_1022736961	3300005614	Corn Rhizosphere	SAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAAPVITRKGTAP*
Ga0070702_1000185652	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	SVALESRVYRGALAAPIGVMDPLRECRMHQDGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKGTAA*
Ga0070702_1016867361	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GAETLLSSVAALIETSAQQASSHHNASAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTAEENPEVLETECLFCSNTVRYIIDFSLSVFSPTKVKITPVITRSNTAA*
Ga0068864_1021426392	3300005618	Switchgrass Rhizosphere	APVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAAPVITRKGTAA*
Ga0068861_1001066502	3300005719	Switchgrass Rhizosphere	LAFWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENAEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKGTAA*
Ga0066656_102952091	3300006034	Soil	KGEDHADALLNSVAALIQTSNEQASAHQSGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVRTEENPEVLETPCPFCLNTVKYIIDFSLSVFSPTKAEPTPVISGKDMA*
Ga0097621_1000754211	3300006237	Miscanthus Rhizosphere	MHQDGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRK
Ga0068871_1003000593	3300006358	Miscanthus Rhizosphere	SSVAALIQTSATQATSHQDSSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLHVTTEENPEVLKTECLFCSNKVRYIIDFSLSVFSPTKMKAAPIITLKGSTGVA*
Ga0068871_1007915941	3300006358	Miscanthus Rhizosphere	VRPLAFWIPRNGKDSNGIPYIVITCTECLRSFPLNVAKEENAEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVI
Ga0066660_110484451	3300006800	Soil	HQSGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVRTEDNPEVLETLCPFCLNAVKYIIDFSRAVFSPTKVELAPVISRKDTA*
Ga0075425_1013214022	3300006854	Populus Rhizosphere	HNASAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTAEENPEVLETECLFCSNTVRYIIDFSLSVFSPTKVKITPVITRSNTAA*
Ga0075426_115436921	3300006903	Populus Rhizosphere	APVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETPCPFCLNTVKYIIDFSLSVFSPTKVKLVPVISRRNTAT*
Ga0105240_113618722	3300009093	Corn Rhizosphere	NGKDSNGIPYIVITCTECLRSFPLNVTKEESPEVLETRCLFCSNPVRYIIDFSLSVSSPTKAMSARPIRPKRTAT*
Ga0105247_106750852	3300009101	Switchgrass Rhizosphere	AQQASSHHNASAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTAEENPEVLETECLFCSNTVRYIIDFSLSVFSPTKVKITPVITRSNTAA*
Ga0105243_113219001	3300009148	Miscanthus Rhizosphere	SVALESRVYRGALAAPIGVMDPLRECRMHQDGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENAEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKGTAA*
Ga0105241_111514821	3300009174	Corn Rhizosphere	PVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKDTAA*
Ga0105241_117001371	3300009174	Corn Rhizosphere	IETSGEQASAHQTGSAPVWIPRNGQDSNGIPYIVITCTECLRSFPLNVTTEENPEVLETPCPFCLNTVKYIIDFSLSVFSPTKVKPTPVVSRKDSLA*
Ga0105248_106800831	3300009177	Switchgrass Rhizosphere	MHQDGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVAKEENAEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKGTAA*
Ga0105248_109295143	3300009177	Switchgrass Rhizosphere	DSVAALIRTSAEQARSHQDGSAPVWIPRNGRDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTTAMSTPSNQAKTHCGITQL*
Ga0105238_113998541	3300009551	Corn Rhizosphere	HQDATAPVWIPRNGKDSNGVPYIVITCTECLRSFPLNVTTEQNPEVRETPCLFCSNTVKYIIDFSLSVASPPRKLSGALRTAGAV*
Ga0105249_100846381	3300009553	Switchgrass Rhizosphere	SNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKDTAA*
Ga0134125_121022121	3300010371	Terrestrial Soil	IQSSAQQASAHQSGPAPVWIPRNGQDSNGIPYIVITCTECLRSFPLNVTTEENPEVLETPCPFCLNTVKYIIDFSLSVFSPTKVKPTPVVSRKDSLA*
Ga0134128_108440792	3300010373	Terrestrial Soil	IPRNGKDSNGIPYIVITCTECLRSFPLHVTTEENPEVLKTQCLFCSNKVRYIIDFSLSVFSPTKMKAAPIITLKGSTGVA*
Ga0134128_110500551	3300010373	Terrestrial Soil	KDSNGIPYIVITCTECLRSFPLNVTREENPEVLETPCPFCLNTVKYIIDFSLSVFSPTKVKLAPVIIRDEAAA*
Ga0134128_115600002	3300010373	Terrestrial Soil	SAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTGEENPEVLETPCLFCSNAVRYIIDFSLSVFSPTKVKATPVITRKTVA*
Ga0134126_125176101	3300010396	Terrestrial Soil	NSVAALIATSAAQATAHQDATAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVRTEQNPEVLETPCLFCSNTVKYIIDFSLSVTSPPKGPLSVRIRAGAD*
Ga0134124_126653821	3300010397	Terrestrial Soil	RTHRHASAPVWIPRNGKDSNGIPYVVITCTECLRSFALNVTQEESPEVLETQCLFCSNPVRYIIDFSLSVFSPKESNEVRPIKPKGTAA*
Ga0134122_120859961	3300010400	Terrestrial Soil	MHQDGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAAPVITPKGTAA*
Ga0134121_107414402	3300010401	Terrestrial Soil	PVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVSSPRKAHAAPLIRRKGTAA*
Ga0137399_108427571	3300012203	Vadose Zone Soil	RARTHQEESAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENSEVLETLCLFYANTVKYIIDFSLSVTSPRRALSPPIRTPELGPGSSRPRANP*
Ga0137376_105657033	3300012208	Vadose Zone Soil	AIVADLIRTSASRGNAHAKESAPVWIPRNGKDSHGVPYVVLTCTECLRSFPLNVTKEMIPEVQETPCLFCPNTVRYIIDFSRSVISPMARGA*
Ga0137370_101308721	3300012285	Vadose Zone Soil	IQTSEARARAHQEESAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTGEENPEVLETLCLFCSSTVKYIIDFSLSVTSPPKTLSAPIPATRAAG*
Ga0137386_101720821	3300012351	Vadose Zone Soil	EESAPVWIPRNGKDSHGIPYIVITCTECLRSFPLNVTKDENPEVLETLCLFCANKVKYIIDFSLSVTSPPKGVSAPIRATGTAG*
Ga0164305_109277151	3300012989	Soil	NLLSSVAALIQTSATQASSHQNGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTTEENPEVLETQCLFCSNTVRYIIDFSLSVFSPTKVKAAPVITGRGTAD*
Ga0157369_102130756	3300013105	Corn Rhizosphere	IPRNGKDSNGIPYIVITCTECLRSFPLNVTTEENPEVLETQCLFCSNTVRYIIDFSLSVFSPTKVKAAPVITGRGTAA*
Ga0157374_106873971	3300013296	Miscanthus Rhizosphere	LIQTSAEQASAHQSGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLHVSTEENPEVLKTPCLFCSNTVKYIIDFSLSVFSPTKVKATPVVTGRGTAA*
Ga0163162_132067451	3300013306	Switchgrass Rhizosphere	ATLIQTSAEQAKAHQDGCAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENAEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAAPVITRKGTAP*
Ga0157372_105824351	3300013307	Corn Rhizosphere	DPRTLLNSVAMLIQTSDAQAIAHQDQSAPVWIPRNGKDSNGVPYIVITCTECLRSFPLNVATEQNPEVLETPCLFCSNTVKYIIDFSLSVTSPPKKISGTLRTAGAA*
Ga0157372_112457252	3300013307	Corn Rhizosphere	AQQASSHQNVSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTTEENPEVLETQCLFCSNTVRYIIDFSLSVFSPTKVKITPVITPTNTAA*
Ga0157372_125745401	3300013307	Corn Rhizosphere	PVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTTEENPEALETQCPFCSNTVKYIIDFSLSVFSPTKLKAAPVITLKGTVA*
Ga0163163_108270522	3300014325	Switchgrass Rhizosphere	GIPYIVITCTECLRSFPLNVTKEENAEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKGTAA*
Ga0182008_100288401	3300014497	Rhizosphere	HQDGCAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNLVKYIIDFSLSVFSPTRAKAPPVITRKGTAA*
Ga0157376_123998641	3300014969	Miscanthus Rhizosphere	ESRVYRGALAAPIGVMDTLRECRMHQDGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKGTAA*
Ga0132257_1026105482	3300015373	Arabidopsis Rhizosphere	LLSSVAALIETSAQQASSHHNASAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTAEENPEVLETECLFCSNTVRYIIDFSLSVFSPTKVKITPVITRSNTAA*
Ga0184605_102537271	3300018027	Groundwater Sediment	HQQEQAPVWIPRNGKDSNGIPYIVLTCTECLRSFPLNVSHETIPEVLETPCLFCPNTVRYIIDFSLSVVSPKAVSDLRRLPA
Ga0190275_107890911	3300018432	Soil	ESAPVWIPRNGNDASGIPYVVLTCTECLRSFPLNVADEVNAEILEIPYIFCVSKVRYIIDFSPSVASPPKIKPEAKGTSASTV
Ga0193722_10629402	3300019877	Soil	PVWIPRNGKDSNGIPYIVITCTECLRSFPLNVRTEENPEVLETPCPFCLNAVKYIIDFSRGVCSPTKVELAPVISRKDTA
Ga0193721_11126511	3300020018	Soil	LIQTSAARARAHEKESAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEQNPEVLETLCLFCSSTVKYIIDFSLSVTSPARGLSSPVRTTGIAS
Ga0210406_101270244	3300021168	Soil	QDESAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTTEQNPEVLETPCLFCANTVKYIIDFSLSVTSPPKGYASLHATGSAA
Ga0182009_100454313	3300021445	Soil	AEQARTHQDGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVSSPRKAHAAPLIRRKGTAA
Ga0207697_102631321	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	TSAEQARTHQDGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKGTAA
Ga0207692_101807442	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	ETLLSSVAALIQTSATQASAHQNGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTTEENPEVLETQCLFCSNTVKYIIDFSLSVFSPTKVKATPVITRKDTAA
Ga0207680_102622282	3300025903	Switchgrass Rhizosphere	MHQDGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKDTAA
Ga0207707_110022931	3300025912	Corn Rhizosphere	DSPETLLNSVATLIQTSAEQAKAHQDGCAPLWIPRNGKDSNGIPYIVITCTECLRSFPLDVTKEENPEVLETQCLFCSNPVKYIIDFSLSVSSPRKAHAAPLIRRKGTAA
Ga0207707_112248002	3300025912	Corn Rhizosphere	ALIQTSATQASSHQNGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTTEENPEVLETQCLFCSNTVRYIIDFSLSVFSPTKVKAAPVITGRGTAA
Ga0207650_104763131	3300025925	Switchgrass Rhizosphere	GKDSNGIPYIVITCTECLRSFPLNVAKEENAEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAAPVITRKGTAP
Ga0207687_101165971	3300025927	Miscanthus Rhizosphere	LIQTSAEQAKAHQDGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENAEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKGTAA
Ga0207664_106185831	3300025929	Agricultural Soil	TSNAQATAHQDATAPVWIPRNGKDSNGVPYIVITCTECLRSFPLNVTAEQSPEVLETPCLFCSNTVKYIIDFSLSVSSPPKGAASIRIRQGAA
Ga0207664_113446451	3300025929	Agricultural Soil	TSATQARSHRDTSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTTEENPEVLKTPCLFCSNMVKYIIDFSLSVFSPAKIKAVPVITLKGSNS
Ga0207706_1000925813	3300025933	Corn Rhizosphere	MHQDGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFS
Ga0207670_117660001	3300025936	Switchgrass Rhizosphere	HQDGCAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENAEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKGTAA
Ga0207665_110608641	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	TSAARARAHQKESAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTTEENQEVLETHCLFCSNKVNYIIDFSLSVSSPPKGAASIRIRQGAA
Ga0207679_106731802	3300025945	Corn Rhizosphere	EQARTHQDGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAAPVITRKGTAP
Ga0207658_103728231	3300025986	Switchgrass Rhizosphere	MHQDGSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKA
Ga0207702_100350968	3300026078	Corn Rhizosphere	RNGKDSNGIPYIVITCTECLRSFPLHVTTEENPEVLKTQCLFCSNKVRYIIDFSLSVFSPTKMKAAPIITLKGSTGVA
Ga0207702_106932281	3300026078	Corn Rhizosphere	RTSAEQARTHHDASAPVWIPRNGRDSNGIPYIVITCTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTTAMSTPSNQAKTHCGITQL
Ga0207648_100237951	3300026089	Miscanthus Rhizosphere	APLWIPRNGKGSNGIPYIVIICTECLRSFPLNVTKEENPEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAAPVITRKGTAP
Ga0207648_103035061	3300026089	Miscanthus Rhizosphere	SSHHNASAPVWIPRNGKDSNGIPYIVITCTECLRSFPLNVTAEENPEVLETECLFCSNTVRYIIDFSLSVFSPTKVKITPVITRSNTAA
Ga0268266_101003762	3300028379	Switchgrass Rhizosphere	WIPRNGKDSNGIPYIVITCTECLRSFPLNVTKEENAEVLETQCLFCSNPVKYIIDFSLSVFSPTKAKAARVITRKGTAA
Ga0310813_116221282	3300031716	Soil	IQTSATQARSHRDTSAPVWIPRNGKDSNGIPYIVITCTECLRSFPLHVTTEENPEVLKTQCLFCSNKVRYIIDFSLSVFSPTKMKAAPIITLKGSTGVA
Ga0310810_110170031	3300033412	Soil	IETSGEQASAHQSGSAPVWIPRNGQDSNGIPYIVITCTECLRSFPLNVRTEENPEVLETPCPFCSSTVKYIIDFSLSVFSPAKAEPTPVISRKDKAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090553

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences