Metagenome / Metatranscriptome Family F090639

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090639
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	63 residues
Representative Sequence	MRLLVLLALILCFVAVLAFGFLVLVRELLARDIFGAPSLPSGPPEQIQEPERETESHSAAPQS
Number of Associated Samples	84
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	67.59 %
% of genes near scaffold ends (potentially truncated)	23.15 %
% of genes from short scaffolds (< 2000 bps)	74.07 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.037 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (32.407 % of family members)
Environment Ontology (ENVO)	Unclassified (40.741 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.296 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.36% β-sheet: 0.00% Coil/Unstructured: 62.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF02321	OEP	35.19
PF13463	HTH_27	21.30
PF00873	ACR_tran	4.63
PF01734	Patatin	3.70
PF07244	POTRA	1.85
PF13899	Thioredoxin_7	1.85
PF00440	TetR_N	1.85
PF00004	AAA	0.93
PF01047	MarR	0.93
PF12802	MarR_2	0.93
PF00571	CBS	0.93
PF13011	LZ_Tnp_IS481	0.93
PF04542	Sigma70_r2	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	70.37
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	3.70
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	3.70
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	3.70
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.93
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.93
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.93
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.04 %
All Organisms	root	All Organisms	37.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.04 %
cellular organisms	root	All Organisms → cellular organisms	37.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.04 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.22 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.04 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.04 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	3.70 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.04 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	3.70 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.04 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	3.70 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.04 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	3.70 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10342528	Not Available	919	Open in IMG/M
3300001661\|JGI12053J15887_10286486	Not Available	809	Open in IMG/M
3300002245\|JGIcombinedJ26739_100265881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1602	Open in IMG/M
3300002245\|JGIcombinedJ26739_101730759	Not Available	525	Open in IMG/M
3300002917\|JGI25616J43925_10039635	Not Available	2067	Open in IMG/M
3300004631\|Ga0058899_10017904	Not Available	1487	Open in IMG/M
3300004631\|Ga0058899_11880648	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300004631\|Ga0058899_12018503	Not Available	1268	Open in IMG/M
3300005541\|Ga0070733_11130767	Not Available	525	Open in IMG/M
3300006176\|Ga0070765_101704571	Not Available	592	Open in IMG/M
3300006893\|Ga0073928_10021507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6603	Open in IMG/M
3300006893\|Ga0073928_10812393	Not Available	645	Open in IMG/M
3300007265\|Ga0099794_10050542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2000	Open in IMG/M
3300007788\|Ga0099795_10001550	All Organisms → cellular organisms → Bacteria → Proteobacteria	5048	Open in IMG/M
3300007788\|Ga0099795_10002599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4288	Open in IMG/M
3300009088\|Ga0099830_10156004	Not Available	1759	Open in IMG/M
3300009089\|Ga0099828_11798979	Not Available	538	Open in IMG/M
3300009143\|Ga0099792_10000754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	11864	Open in IMG/M
3300010855\|Ga0126355_1044046	All Organisms → cellular organisms → Bacteria	2156	Open in IMG/M
3300010858\|Ga0126345_1218753	Not Available	605	Open in IMG/M
3300010860\|Ga0126351_1241107	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300010861\|Ga0126349_1204984	Not Available	506	Open in IMG/M
3300010861\|Ga0126349_1254465	Not Available	1125	Open in IMG/M
3300010865\|Ga0126346_1353921	Not Available	967	Open in IMG/M
3300011120\|Ga0150983_10707892	Not Available	1352	Open in IMG/M
3300011269\|Ga0137392_10015336	All Organisms → cellular organisms → Bacteria → Proteobacteria	5231	Open in IMG/M
3300011269\|Ga0137392_10055770	All Organisms → cellular organisms → Bacteria → Proteobacteria	2987	Open in IMG/M
3300011271\|Ga0137393_10095517	All Organisms → cellular organisms → Bacteria → Proteobacteria	2418	Open in IMG/M
3300011271\|Ga0137393_10440663	Not Available	1116	Open in IMG/M
3300012189\|Ga0137388_11183560	Not Available	702	Open in IMG/M
3300012202\|Ga0137363_10047206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	3068	Open in IMG/M
3300012203\|Ga0137399_11602574	Not Available	539	Open in IMG/M
3300012205\|Ga0137362_10051524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	3357	Open in IMG/M
3300012205\|Ga0137362_10533354	Not Available	1014	Open in IMG/M
3300012205\|Ga0137362_11203852	Not Available	642	Open in IMG/M
3300012209\|Ga0137379_11616503	Not Available	546	Open in IMG/M
3300012362\|Ga0137361_10209360	All Organisms → cellular organisms → Bacteria → Acidobacteria	1766	Open in IMG/M
3300012683\|Ga0137398_10124172	Not Available	1652	Open in IMG/M
3300012924\|Ga0137413_10025494	All Organisms → cellular organisms → Bacteria	3172	Open in IMG/M
3300012925\|Ga0137419_10204014	Not Available	1465	Open in IMG/M
3300012927\|Ga0137416_10040112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	3205	Open in IMG/M
3300012927\|Ga0137416_10465520	Not Available	1083	Open in IMG/M
3300012927\|Ga0137416_10785211	Not Available	841	Open in IMG/M
3300012929\|Ga0137404_10026571	All Organisms → cellular organisms → Bacteria → Proteobacteria	4239	Open in IMG/M
3300012929\|Ga0137404_11583076	Not Available	607	Open in IMG/M
3300015054\|Ga0137420_1501599	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300015242\|Ga0137412_10003763	All Organisms → cellular organisms → Bacteria → Proteobacteria	12091	Open in IMG/M
3300015245\|Ga0137409_10429917	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300019890\|Ga0193728_1091944	Not Available	1414	Open in IMG/M
3300019890\|Ga0193728_1240114	Not Available	733	Open in IMG/M
3300020140\|Ga0179590_1002639	All Organisms → cellular organisms → Bacteria	3133	Open in IMG/M
3300020199\|Ga0179592_10031756	Not Available	2382	Open in IMG/M
3300020579\|Ga0210407_11029738	Not Available	627	Open in IMG/M
3300020580\|Ga0210403_10405716	Not Available	1112	Open in IMG/M
3300020580\|Ga0210403_10652085	Not Available	847	Open in IMG/M
3300020583\|Ga0210401_11329075	Not Available	577	Open in IMG/M
3300021168\|Ga0210406_10284194	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300021168\|Ga0210406_10638408	Not Available	827	Open in IMG/M
3300021170\|Ga0210400_10507621	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300021178\|Ga0210408_11089396	Not Available	615	Open in IMG/M
3300021404\|Ga0210389_11212804	Not Available	580	Open in IMG/M
3300021405\|Ga0210387_11379137	Not Available	607	Open in IMG/M
3300021406\|Ga0210386_10132624	All Organisms → cellular organisms → Bacteria	2070	Open in IMG/M
3300021479\|Ga0210410_10435297	Not Available	1173	Open in IMG/M
3300022504\|Ga0242642_1010539	Not Available	1132	Open in IMG/M
3300022506\|Ga0242648_1060481	Not Available	595	Open in IMG/M
3300022508\|Ga0222728_1047355	Not Available	714	Open in IMG/M
3300022533\|Ga0242662_10034271	Not Available	1241	Open in IMG/M
3300022533\|Ga0242662_10120314	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300022557\|Ga0212123_10024871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6491	Open in IMG/M
3300022726\|Ga0242654_10073142	Not Available	1024	Open in IMG/M
3300022726\|Ga0242654_10346228	Not Available	558	Open in IMG/M
3300026304\|Ga0209240_1054157	Not Available	1508	Open in IMG/M
3300026320\|Ga0209131_1003075	All Organisms → cellular organisms → Bacteria → Proteobacteria	11169	Open in IMG/M
3300026482\|Ga0257172_1000714	All Organisms → cellular organisms → Bacteria	3465	Open in IMG/M
3300026555\|Ga0179593_1213576	Not Available	2399	Open in IMG/M
3300027496\|Ga0208987_1005756	All Organisms → cellular organisms → Bacteria → Proteobacteria	2001	Open in IMG/M
3300027537\|Ga0209419_1081535	Not Available	640	Open in IMG/M
3300027565\|Ga0209219_1038533	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300027591\|Ga0209733_1092006	Not Available	770	Open in IMG/M
3300027633\|Ga0208988_1067165	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300027651\|Ga0209217_1044478	Not Available	1353	Open in IMG/M
3300027681\|Ga0208991_1164017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300027727\|Ga0209328_10036686	Not Available	1508	Open in IMG/M
3300027895\|Ga0209624_11022820	Not Available	535	Open in IMG/M
3300027908\|Ga0209006_10054232	All Organisms → cellular organisms → Bacteria → Proteobacteria	3596	Open in IMG/M
3300028047\|Ga0209526_10426429	All Organisms → cellular organisms → Bacteria → Proteobacteria	876	Open in IMG/M
3300028536\|Ga0137415_10140127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2258	Open in IMG/M
3300028536\|Ga0137415_10192513	Not Available	1861	Open in IMG/M
3300028536\|Ga0137415_10320333	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300030730\|Ga0307482_1075238	Not Available	878	Open in IMG/M
3300030923\|Ga0138296_1288718	Not Available	761	Open in IMG/M
3300030923\|Ga0138296_1399676	Not Available	629	Open in IMG/M
3300030937\|Ga0138302_1238442	Not Available	1515	Open in IMG/M
3300030998\|Ga0073996_10025915	Not Available	1610	Open in IMG/M
3300031023\|Ga0073998_11633962	All Organisms → cellular organisms → Bacteria → Proteobacteria	2442	Open in IMG/M
3300031057\|Ga0170834_101611465	Not Available	586	Open in IMG/M
3300031057\|Ga0170834_108416099	Not Available	1147	Open in IMG/M
3300031128\|Ga0170823_13006275	Not Available	1112	Open in IMG/M
3300031231\|Ga0170824_101263708	Not Available	1245	Open in IMG/M
3300031231\|Ga0170824_112023269	All Organisms → cellular organisms → Bacteria → Proteobacteria	1052	Open in IMG/M
3300031446\|Ga0170820_10129228	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300031753\|Ga0307477_10336242	Not Available	1040	Open in IMG/M
3300031754\|Ga0307475_10959830	Not Available	673	Open in IMG/M
3300031962\|Ga0307479_11166119	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300031962\|Ga0307479_11639449	Not Available	598	Open in IMG/M
3300032174\|Ga0307470_10058590	Not Available	2016	Open in IMG/M
3300032180\|Ga0307471_101644851	Not Available	797	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.22%
Aquatic	Environmental → Aquatic	2.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.22%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.70%
Loam	Environmental → Terrestrial → Soil → Loam	18.52%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.52%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	32.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	17.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.56%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	5.56%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010855	Boreal forest soil eukaryotic communities from Alaska, USA - W1-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010861	Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027496	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031023	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_103425282	3300001593	Forest Soil	MRDLISLALILCFVAMLMFGLLDLARQLLMRNFFGAPSLPSVPPEQTQVPEPEAESHSATPLS*
JGI12053J15887_102864863	3300001661	Forest Soil	MRFLISLTLILCFVAVLVFGLLSLARELLMRNFFGAPSLPSASPELTQVSEREAESQSAT
JGIcombinedJ26739_1002658814	3300002245	Forest Soil	MRLFILLALVLCFVALLVLGFVTLARDLLMRNFFGAPSLPNVPPEQTQAPQSETESHSATPLS*
JGIcombinedJ26739_1017307593	3300002245	Forest Soil	MRYLLLLALISCFVAILIVGFLDLVRELTARNFFGAPSLPSAPPEQSQELDREAESHSATPLS*
JGI25616J43925_100396352	3300002917	Grasslands Soil	MRLLVMLALILCFAAVLAFGFLVLMRELLARDFFSAPSLPSGPPEPTQESERDAKSHSAAPQS*
Ga0058899_100179044	3300004631	Forest Soil	MHLLLSLALALCFVALLIVGFLSLARELLMRDFFGAPSLPKAPPQQTRAPETESHSLQRPTR
Ga0058899_118806481	3300004631	Forest Soil	MIVLRGIGMRLLVLLALILCFVAVLAFGFLVLVRELLARDIFGAPSLPSGPPEQIQEPERETESHSAAPQS*
Ga0058899_120185033	3300004631	Forest Soil	MRFLVLLALILCFFALLSFGFLVLVRELLARDMFGAPSLPGGPQEQTEESEREADSHSAAPLS*
Ga0070733_111307672	3300005541	Surface Soil	MRFLVLLALILCFVALLAFGFLVLVRELLARDIFSAPTLPSGAPEQIPESERETESHSAAPQS*
Ga0070765_1017045712	3300006176	Soil	MRLLVLLALILCFVAVLAFGFLVLVRELLARDIFGAPSLPSGPPEQIQEPERETESHSAAPQS*
Ga0073928_100215077	3300006893	Iron-Sulfur Acid Spring	MRFMVLLALILCFVALLAFGFLVLLRELLARDIFGAPSLPGGPPEQIQEPERETESHSAAPQS*
Ga0073928_108123932	3300006893	Iron-Sulfur Acid Spring	MRHLISLALVLCFVAVLMVGFLSLARELLVRDFFSAPSLPSVPPEQTHASEPEAESHSATPLS*
Ga0099794_100505423	3300007265	Vadose Zone Soil	MRFLILLALILCFVAVLMFGFLVLVRELLARNFFGAPSLPSGPQEQTEESEREAESQSAAPLS*
Ga0099795_100015507	3300007788	Vadose Zone Soil	MRFLVLLALILCFVALLAFGFLVLVRELLARDIFGAPSLPGGPPEQIQEPERETESHSAAPQS*
Ga0099795_100025993	3300007788	Vadose Zone Soil	ALISCFVAILIVGFLDLVRELLTRNFFGAPLLPGAPPEQSEALDREAESHSATPLS*
Ga0099830_101560043	3300009088	Vadose Zone Soil	MRFLVLLALILCFVALLAFGFLVLVRELLARDIFSAPSLPSGPPEQIQEPERETESHSAAPQS*
Ga0099828_117989791	3300009089	Vadose Zone Soil	MRFLILLALILCFVAVLMFGFLVLVRELLARNFFGAPSLPSGPQEQTEESEREAESHSAA
Ga0099792_100007549	3300009143	Vadose Zone Soil	MRFLVLLALILCFVALLAFGFLVLVRELLARDIFGAPSLPSGPPEQIQEPERETESNSAAPQS*
Ga0126355_10440462	3300010855	Boreal Forest Soil	MRLLISLALILCVVAVLVFGFLNLARELLTRNFFGAPSLPSGAPEQGQVSEREVESRSATPLS*
Ga0126345_12187531	3300010858	Boreal Forest Soil	MRYLLLLALISCFAAILIIGFLDLVRELTTRNFFGAPSLPSAPPEQSQGLDREAESHSATPLS*
Ga0126351_12411074	3300010860	Boreal Forest Soil	MRDLISLALVLCFVAVLMFGFLELARELLMKNFFGAPSLPSVPPEQTQMSEPEAKSHSATPLS*
Ga0126349_12049841	3300010861	Boreal Forest Soil	MRYLFLLSLILCFAAVLTVGFLNLIRELLTRDFFGAPSLPSVPPEQIQSLEQDTESHSATPLP*
Ga0126349_12544653	3300010861	Boreal Forest Soil	MRDLTSLALILCFVAVLMFGFLELARELLMRDFFGAPSLPSVPPEQTQVPEAEAESHSATPLS*
Ga0126346_13539212	3300010865	Boreal Forest Soil	MRYLLLLALISCFVAILMVGFLGLVRELTTRNFFGAPSLPSAQPEQSQGLDREAESHSATPLS*
Ga0150983_107078921	3300011120	Forest Soil	MHLLLSLALALCFVALLIVGFLSLARELLMRDFFGAPSLPKAPPQQTRAPETESHSLQRPTR*
Ga0137392_100153365	3300011269	Vadose Zone Soil	MRFLVLLALILCFVALLAFGFLVLVRELLARDIFGAPSLPSGPPEQIQEPERETESHSAAPQS*
Ga0137392_100557702	3300011269	Vadose Zone Soil	MRFLILLALILCFVAVLMFGFLVLVRELLARNFFGAPSLPSGPQAQTEESEREAESHSAAPLS*
Ga0137393_100955174	3300011271	Vadose Zone Soil	MRFLILLALILCFVAVLMFGFLVLVRELLARNFFGAPSLPGGPQEQTEESERDAESHSAAPLS*
Ga0137393_104406632	3300011271	Vadose Zone Soil	MRLLISLALILCFVAVLVFGFLSLARELLMRDFFGGPSLPSGPPEQTQVPEREEESRSATPLS*
Ga0137388_111835602	3300012189	Vadose Zone Soil	MRFLILLALILCFVAVLMFGFLVLVRELLARNFFGAPSLPGGPQEQTEESEREAESQSAAPLS*
Ga0137363_100472063	3300012202	Vadose Zone Soil	LVLLALILCFVALLAFGFLVLVRELLARDIFGAPSLPGGPPEQIQEPERETESHSAAPQS
Ga0137399_116025742	3300012203	Vadose Zone Soil	MRLLISLTLILCFVAVLVFGFLSLARELLKRNFFGAPSLPSASPELTQVSEREAESQSATPL
Ga0137362_100515243	3300012205	Vadose Zone Soil	AMRFLVLLALILCFVALLAFGFLVLVRELLARDIFGAPSLPGGPPEQIQEPERETEPHSAAPQS*
Ga0137362_105333543	3300012205	Vadose Zone Soil	MRFLILLALILCFVAVLMFGFLVLVRELLARNFFGSPSLPSGPQEQTEESEREAESHSAAPLS*
Ga0137362_112038522	3300012205	Vadose Zone Soil	MRILVLLALILCFVALLAFGFLVLVRELLARDIVGAPSLPSGPLEQIQEPERETESHSAAPQS*
Ga0137379_116165033	3300012209	Vadose Zone Soil	MRYLILLALILCFVAVLMFGFLNLARELLMRNCFGAPSLPGGPPEQTQVSEREAGSHSAT
Ga0137361_102093604	3300012362	Vadose Zone Soil	MRFLVLLALILCFVALLAFGFLVLVRELLARDIFGAPSLPSGPLEQIQEPERETESHSAAPQS*
Ga0137398_101241722	3300012683	Vadose Zone Soil	MRYLFLFALISCFVAILIVGFLDLVRELLTRNFFGAPLLPGAPPEQSEALDREAESHSATPLS*
Ga0137413_100254941	3300012924	Vadose Zone Soil	MRHLFLLALILCFVAILIFGFMDLVRELLTRDFFGAPSLPSAPPEQSQALDREAESHSATPLS*
Ga0137419_102040142	3300012925	Vadose Zone Soil	MRYLFLFALISCFVAILIVGFLDLVRELLTRNFFGAPSLPGVLPEQSEALDREAESHSATPLS*
Ga0137416_100401123	3300012927	Vadose Zone Soil	MRFLVLLALILCFVALLAFGFVVLVRELLARDIFGAPSLPSGPPEQIQEPERETESHSAAPQS*
Ga0137416_104655202	3300012927	Vadose Zone Soil	MRFLILLALILCFVAVLMFGFLVLVRELLARNFFGAPSLPSGPQEQTEESEREAESHSAAPLS*
Ga0137416_107852111	3300012927	Vadose Zone Soil	MRHLISLALILCFVAVLMYGFLNLARELLTRNFFGAPSLPSALPEQTRGSETQESESHSATPLS*
Ga0137404_100265712	3300012929	Vadose Zone Soil	MIDLRGIAMRFLVLLALILCFVALLAFGFLVLVRELLARDIFGAPSLPSGPPEQESERETESHSAAPQS*
Ga0137404_115830762	3300012929	Vadose Zone Soil	AMRFLVLLALILCFVAVLAFGFLVLVRELLARDIVGAPSLPGGPLEQIQEPERETESHSAAPQS*
Ga0137420_15015992	3300015054	Vadose Zone Soil	MRYLFLFALISCFVAILIVGFLDLVRELLTRNFFGAPSLPGVLPEQSEVLDREAESHSATPLS*
Ga0137412_100037638	3300015242	Vadose Zone Soil	MRHLFLLALILCFVAILIFGFLDLVRELLTRDFFGAPSLPSAPPEQSQALDREAESHSATPLS*
Ga0137409_104299172	3300015245	Vadose Zone Soil	MRYLFLLALILCFVAILIFGFLNLMRELLTRDFFGVPSLPSGLPEQTQALEREAETHSATPQS*
Ga0193728_10919441	3300019890	Soil	MRLLISLALILCVVAVLMFGFLNLARELLTRNFFGAPSLPSAPSEQTRASGTQESESHSAMPLS
Ga0193728_12401142	3300019890	Soil	MRYLLLLALILCFVAVLVFGFLNLAIELLTRNSFGAPSLPSGPPEQTQMSEQEADSHSATPLS
Ga0179590_10026395	3300020140	Vadose Zone Soil	MRFLVLLALILCFVALLAFGFLVLVRELLARDIFGAPSLPGGPPEQIQEPERETESHSAAPQS
Ga0179592_100317563	3300020199	Vadose Zone Soil	MRLLVLIALILCFVAVLAFGFLVLLRELLARDLFVAPSFPSGPPEQTQESEQETESHSAAPLS
Ga0210407_110297382	3300020579	Soil	MRLLVLLALILCFVAVLAFGFLVLARELLARDIFGAPSLPSGPPEQIQEPERETESHSAAPQS
Ga0210403_104057162	3300020580	Soil	MRLFILLALVLCFVALLVLGFVTLARELLMRNFFGAPSLPNVPPEQTQAPQSETESHSATPLS
Ga0210403_106520852	3300020580	Soil	MRLLILLALILCFAAILAFGFLVLVRELLARNFFGAPSLPGGPLEQTQESERDTESHSAARLS
Ga0210401_113290752	3300020583	Soil	MRYLLLLALISCFVAILIVGFLDLVRELTARNFFGAPSLPSAPPEQSQELDREAESHSAT
Ga0210406_102841941	3300021168	Soil	MRLLILLALILCFVALTAFGFLVLVRELLARDIFGAPSLPSGPPEQIQEPERETESHSAAPQS
Ga0210406_106384082	3300021168	Soil	MRLLISFALILCVVAVLVFGFLNLARELLTRNFFGAPSLPSAPSEQTRASGTQESESHSATPG
Ga0210400_105076212	3300021170	Soil	MRLLVLVALILGIVAVLAFGFLVLVRELLAGDSFGAPSLPSGPPEQTPESERGAESHSAAPLS
Ga0210408_110893961	3300021178	Soil	MIVLRGIGMRLLILLALILCFVALTAFGFLVLVRELLARDIFGAPSLPSGPPEQIQEPERETESHSAAPQS
Ga0210389_112128042	3300021404	Soil	MRYLLLLALISCFVAILIVGFLDLVRELTARNFFGAPSLPSAPPEQSQELDREAESHSATPLS
Ga0210387_113791372	3300021405	Soil	MRYLLLLALISCFVAILIVGFLDLVRELTARNFFGAPSLPSAAPEQSQELDREAESHSATPLS
Ga0210386_101326243	3300021406	Soil	MHPLMSLALILCFVAMLMIGFLNLARELSMRDFFGAPSLPSVSPEQTRVSGSETESHSATPLS
Ga0210410_104352972	3300021479	Soil	MRFLVLLALILCFFALLAFGFLVLVRELLARDMFGAPSLPGGPQEQTEESEREADSHSAAPLS
Ga0242642_10105393	3300022504	Soil	MRLLILLALILCFVAVLAFGFLVLVRELLARDIFGAPSLPSGPPEQIEEPERETESHSAAPQS
Ga0242648_10604812	3300022506	Soil	MRLLVLLALILCFVAVLAFGFLVLVRELLARDIFGAPSLPSGPPEQIQEPERETESHSAAPQS
Ga0222728_10473551	3300022508	Soil	MIVLRGIGMRLLVLLALILCFVAVLAFGFLVLVRELLARDIFGAPSLPSGPPEQIQEPERETESHSAAPQS
Ga0242662_100342713	3300022533	Soil	MRLLILLALILCFVAVLAFGFLVLVRELLARDFFGAPSLPGGPQEQTQGSERDTESHSAAPLS
Ga0242662_101203142	3300022533	Soil	ALLAFGLLVLLRELLARDAFGAPSLPSGPAEQIQQSEIETESHSAAPQS
Ga0212123_100248717	3300022557	Iron-Sulfur Acid Spring	MRFMVLLALILCFVALLAFGFLVLLRELLARDIFGAPSLPGGPPEQIQEPERETESHSAAPQS
Ga0242654_100731421	3300022726	Soil	VHPLMSLALILCLGAPLMIGFLNLARELSMRDFFGAPSLPSVPPDQTRVRDSETESHSATPLS
Ga0242654_103462281	3300022726	Soil	MMVLRGIGMRLLILLALILCFVALTAFGFLVLVRELLARDIFGAPSLPSGPPEQIQEPERETESHSAAPQ
Ga0209240_10541572	3300026304	Grasslands Soil	MIDLRGIAMRLLVMLALILCFAAVLAFGFLVLMRELLARDFFSAPSLPSGPLEPTQESERDAKSHSAAPQS
Ga0209131_10030756	3300026320	Grasslands Soil	MRYLFLFALISCFVAILIVGFLDLVRELLTRNFFGAPLLPGAPPEQSEALDREAESHSRPPLS
Ga0257172_10007142	3300026482	Soil	MIDLRGIAMRLLVVLALILCFVAVLAFGFLVLVRELLARDFFGAPSLPGGPPEQTQESEREAESHSAAPQS
Ga0179593_12135762	3300026555	Vadose Zone Soil	MRYLFLFALISCFVAILIVGFLDLVRELLTRNFFGAPSLPGVLPEQSEALDREAESHSATPLS
Ga0208987_10057561	3300027496	Forest Soil	EQPMRYLLLLALISCFVAILIVGFLDLVRELTTRNFFGAPSLPSAPQEQTQGLDREAESHSATPLS
Ga0209419_10815351	3300027537	Forest Soil	MRLFILLALVLCFVALLVLGFVTLARDLLMRNFFGAPSLPNVPPEQTQAPQSETE
Ga0209219_10385331	3300027565	Forest Soil	GRTDLGDLAMRDLISLALILCFVAMLMFGLLDLARQLLMRNFFGAPSLPSVPPEQTQVPEPEAESHSATPLS
Ga0209733_10920061	3300027591	Forest Soil	VAVLMFGFLDLARQLLMRNFFGAPSLPSVPPEQTQLSEPEADSHSATPLS
Ga0208988_10671652	3300027633	Forest Soil	RHLILLALILCFVAVLVVGFLQLARELLMRNFFGAPSLPSGPPEQTQVSERETESHSATPLS
Ga0209217_10444782	3300027651	Forest Soil	MRYLILLALVLCFVAVLMFGFLNMARELFMRNCFGAPSLPSEPPEQTQAPERDAESHSATPLS
Ga0208991_11640172	3300027681	Forest Soil	VRHLILLALILCFVAVLVIGFLQLARELLMRNFFGAPSLPSGPPEQTQVSEREAKSHSATPLS
Ga0209328_100366861	3300027727	Forest Soil	ISLALVLCFVAVLMVGFLSLARELLMRDFFGAPSLPSVLPEQTHASEPEAESHSATPLS
Ga0209624_110228202	3300027895	Forest Soil	VLVFGFLNLARELLTRNFFGAPSLPSGAPEQGQVSEREVESRSATPLS
Ga0209006_100542323	3300027908	Forest Soil	MRYLLLLALISCFVAILIVGFLDLVRELTARNFFGAPSLPSAPPEQSQGLDRDAESHSATPLS
Ga0209526_104264293	3300028047	Forest Soil	MRLFILLALVLCFVALLVLGFVTLARDLLMRNFFGAPSLPNVPPEQTQAPQSETESHSATPLS
Ga0137415_101401273	3300028536	Vadose Zone Soil	MRFLILLALILCFVAVLMFGFLVLVRELLARNFFGAPSLPSGPQEQTEESEREAESHSAAPLS
Ga0137415_101925134	3300028536	Vadose Zone Soil	MRHLISLALILCFVAVLMYGFLNLARELLTRNFFGAPSLPSALPEQTRGSETQESESHSATPLS
Ga0137415_103203332	3300028536	Vadose Zone Soil	MIDLRGLAMRFLVLLALILCFVALLAFGFVVLVRELLARDIFGAPSLPSGPPEQIQEPERETESHSAAPQS
Ga0307482_10752383	3300030730	Hardwood Forest Soil	MRFLVLLALILCFAALLAFGFLVLVRELLARDLFGAPSLPGGPAEQIQESERETESHSAAPQS
Ga0138296_12887183	3300030923	Soil	MRHLFLLASILCFVAILIFGFLDLARELLARNFFGAPSLPSAPPEQSRALDREAESHSATPLS
Ga0138296_13996761	3300030923	Soil	MRPLFLLASILCFVAILIFGFLDLARELLARNFFGAPSLPSAPPEQYGALDREAESHSATPLS
Ga0138302_12384421	3300030937	Soil	MHALMLLALILCFVALLMIGFLNLAGELSMRDFFGAPSLPSASPEQTRVPGSETESHSAAPLS
Ga0073996_100259154	3300030998	Soil	MRYLFLLSLLLCFAAVLTVGFLNLMRELLTRNFFGEPSLPSVPPEQIQSLEQDTESHYPAGPPSAL
Ga0073998_116339624	3300031023	Soil	MRFVVLLALILCFLALLAFGFLVLVRELLVRDIFGAPSLPSGPPEQIQEPERETGSHSAAPQS
Ga0170834_1016114651	3300031057	Forest Soil	MRFLVLLALILCFVALLAFGFLVLVRELLARDIFGAPSLPSGPPEQTEESEREAESHSAARLS
Ga0170834_1084160993	3300031057	Forest Soil	MRYLLLLALISCFVAILIVGFLDLVRELTTRNFFGAPSLPSAPPDQSQELDREAESHSATPLS
Ga0170823_130062753	3300031128	Forest Soil	MRFLVLLALILCFVALLAFGFLVLVRELLARDIFGAPSLPSGPPEQTEESEREAESHSAARL
Ga0170824_1012637081	3300031231	Forest Soil	MRFLVLLALILCFVALLAFGFLVLVRELLARDIFGAPSLPSGPPEQIQEPERKTESHSAAPQS
Ga0170824_1120232692	3300031231	Forest Soil	MRYLFLLSLILCFAAVLTVGFLNLIRELLTRNFFGEPSLPSVPAEQIQSLEQDTESHSATPLS
Ga0170820_101292281	3300031446	Forest Soil	AMRYLFLLSLILCFAAVLTVGFLNLIRELLTRNFFGEPSLPSVPAEQIQSLEQDTESHSATPLS
Ga0307477_103362422	3300031753	Hardwood Forest Soil	MRFLVLLALILCFAALLVFGFLVLVRELLARDLFGAPSLPGGPAEQIQESERETESHSAAPQS
Ga0307475_109598301	3300031754	Hardwood Forest Soil	DLRRIAMRFLVLLALILCFVALLAFGFLVLVRELLARDFFGAPSLPSAPQEQTEESEREAESHSAAPLS
Ga0307479_111661192	3300031962	Hardwood Forest Soil	SWLPWGMIVLRGIGMRLLVLLALILCFVAVLAFGFLVLVRELLARDFFGAPSLPSGQPGQTRDSTRESEREADSRSVAPLS
Ga0307479_116394492	3300031962	Hardwood Forest Soil	MRFLVLLALILCFVALLAFGFLVLVRELLARDIFGAPTLPSGGPEQIPESERETESHSAASQS
Ga0307470_100585903	3300032174	Hardwood Forest Soil	MRFLVLLALILCFAALLAFGFLVLVRELLARDIFGAPSLPGGPPEKIQEPERETESHSAAPQP
Ga0307471_1016448512	3300032180	Hardwood Forest Soil	MIDLRGIGMRFLVLLALILCFAALLAFGFLVLVRELLARDIFGAPSLPGGPPEKIQEPERETESHSAAPQP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090639

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences