Metagenome / Metatranscriptome Family F090644

Basic Information
Family ID	F090644
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	40 residues
Representative Sequence	SQASERFIALQDVTFELERAQLGLLRSTGDLEKWALGTP
Number of Associated Samples	99
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	87.96 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Most Common Taxonomy
Group	Bacteria (78.704 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (9.259 % of family members)
Environment Ontology (ENVO)	Unclassified (21.296 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.704 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.75% β-sheet: 0.00% Coil/Unstructured: 49.25%
Feature Viewer

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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF12840	HTH_20	36.11
PF02310	B12-binding	15.74
PF05036	SPOR	7.41
PF04055	Radical_SAM	4.63
PF01022	HTH_5	2.78
PF01145	Band_7	1.85
PF14534	DUF4440	1.85
PF03544	TonB_C	0.93
PF00165	HTH_AraC	0.93
PF13432	TPR_16	0.93
PF13249	SQHop_cyclase_N	0.93
PF01569	PAP2	0.93
PF07676	PD40	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.70 %
Unclassified	root	N/A	21.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.70 %
Unclassified	root	N/A	21.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.70 %
Unclassified	root	N/A	21.30 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	39.81 %
Unclassified	root	N/A	21.30 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	21.30 %
Unclassified	root	N/A	21.30 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.56 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	21.30 %
Unclassified	root	N/A	21.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.56 %
Ignavibacteriae	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	21.30 %
Unclassified	root	N/A	21.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.56 %
Ignavibacteria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.30 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	13.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.56 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.93 %
Ignavibacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.30 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	10.19 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.56 %
unclassified Ignavibacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → unclassified Ignavibacteriales	0.93 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.30 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	10.19 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.56 %
Ignavibacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → unclassified Ignavibacteriales → Ignavibacteriales bacterium	0.93 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12644722	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	870	Open in IMG/M
3300001356\|JGI12269J14319_10032469	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3434	Open in IMG/M
3300001356\|JGI12269J14319_10118579	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1229	Open in IMG/M
3300001471\|JGI12712J15308_10117185	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300001593\|JGI12635J15846_10751725	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	560	Open in IMG/M
3300004152\|Ga0062386_100354221	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1176	Open in IMG/M
3300005329\|Ga0070683_102302428	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005526\|Ga0073909_10015797	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2378	Open in IMG/M
3300005552\|Ga0066701_10014236	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3757	Open in IMG/M
3300005563\|Ga0068855_100678821	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1104	Open in IMG/M
3300005602\|Ga0070762_10160320	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1352	Open in IMG/M
3300005602\|Ga0070762_10445753	All Organisms → cellular organisms → Bacteria → Acidobacteria	841	Open in IMG/M
3300005712\|Ga0070764_10393858	All Organisms → cellular organisms → Bacteria → Acidobacteria	817	Open in IMG/M
3300006052\|Ga0075029_101058374	Not Available	562	Open in IMG/M
3300006052\|Ga0075029_101352282	Not Available	501	Open in IMG/M
3300006059\|Ga0075017_100541559	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300006059\|Ga0075017_100845403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300006102\|Ga0075015_100007808	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4424	Open in IMG/M
3300006162\|Ga0075030_101026502	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300006176\|Ga0070765_101173058	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300006804\|Ga0079221_11116222	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300007258\|Ga0099793_10692251	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300009522\|Ga0116218_1336857	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300009524\|Ga0116225_1132286	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300009551\|Ga0105238_11148737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300009638\|Ga0116113_1210040	Not Available	506	Open in IMG/M
3300009672\|Ga0116215_1159535	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300009683\|Ga0116224_10352855	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300009824\|Ga0116219_10244199	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300009839\|Ga0116223_10172482	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300010048\|Ga0126373_10056669	All Organisms → cellular organisms → Bacteria	3500	Open in IMG/M
3300010048\|Ga0126373_10694840	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300010048\|Ga0126373_11918576	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300010359\|Ga0126376_12548689	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300010361\|Ga0126378_10804715	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300012201\|Ga0137365_10571295	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300012683\|Ga0137398_10368891	All Organisms → cellular organisms → Bacteria → Acidobacteria	974	Open in IMG/M
3300012923\|Ga0137359_10317898	Not Available	1385	Open in IMG/M
3300012988\|Ga0164306_11017017	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300014166\|Ga0134079_10393927	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300014489\|Ga0182018_10002865	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	16454	Open in IMG/M
3300014658\|Ga0181519_10170843	Not Available	1379	Open in IMG/M
3300015089\|Ga0167643_1069903	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300015195\|Ga0167658_1051311	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1011	Open in IMG/M
3300017927\|Ga0187824_10220794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300017930\|Ga0187825_10440014	Not Available	504	Open in IMG/M
3300017936\|Ga0187821_10371014	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300017943\|Ga0187819_10650865	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300017955\|Ga0187817_10500334	Not Available	775	Open in IMG/M
3300017955\|Ga0187817_10560769	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300017970\|Ga0187783_11069717	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300017975\|Ga0187782_10887845	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M
3300018008\|Ga0187888_1367844	Not Available	545	Open in IMG/M
3300018038\|Ga0187855_10332161	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300018057\|Ga0187858_10637397	Not Available	640	Open in IMG/M
3300018085\|Ga0187772_10068833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2219	Open in IMG/M
3300018088\|Ga0187771_10061490	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2949	Open in IMG/M
3300018090\|Ga0187770_10351374	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → unclassified Ignavibacteriales → Ignavibacteriales bacterium	1153	Open in IMG/M
3300018431\|Ga0066655_11423545	Not Available	504	Open in IMG/M
3300018433\|Ga0066667_10889100	Not Available	765	Open in IMG/M
3300018468\|Ga0066662_11838312	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300021046\|Ga0215015_10059933	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300021088\|Ga0210404_10874021	Not Available	514	Open in IMG/M
3300021180\|Ga0210396_11505805	Not Available	553	Open in IMG/M
3300021406\|Ga0210386_10489556	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300021407\|Ga0210383_10782704	All Organisms → cellular organisms → Bacteria → Acidobacteria	817	Open in IMG/M
3300021478\|Ga0210402_10028681	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4803	Open in IMG/M
3300021860\|Ga0213851_1075817	Not Available	519	Open in IMG/M
3300022507\|Ga0222729_1052033	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300022557\|Ga0212123_10951127	Not Available	501	Open in IMG/M
3300025414\|Ga0208935_1037740	Not Available	642	Open in IMG/M
3300025482\|Ga0208715_1083090	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300025898\|Ga0207692_10420783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300025944\|Ga0207661_11111284	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300026308\|Ga0209265_1071733	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300026331\|Ga0209267_1282255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300027370\|Ga0209010_1025704	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300027603\|Ga0209331_1012287	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2234	Open in IMG/M
3300027698\|Ga0209446_1112766	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300027738\|Ga0208989_10128391	All Organisms → cellular organisms → Bacteria → Acidobacteria	857	Open in IMG/M
3300027768\|Ga0209772_10106562	All Organisms → cellular organisms → Bacteria → Acidobacteria	864	Open in IMG/M
3300027867\|Ga0209167_10360559	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	791	Open in IMG/M
3300027882\|Ga0209590_10656692	All Organisms → cellular organisms → Bacteria → Acidobacteria	673	Open in IMG/M
3300027905\|Ga0209415_10537608	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300027911\|Ga0209698_10517212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	923	Open in IMG/M
3300027911\|Ga0209698_10915148	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300028017\|Ga0265356_1021231	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300028795\|Ga0302227_10288273	Not Available	625	Open in IMG/M
3300029908\|Ga0311341_10675815	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300029914\|Ga0311359_10504158	Not Available	920	Open in IMG/M
3300030007\|Ga0311338_11045729	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	788	Open in IMG/M
3300030056\|Ga0302181_10410366	Not Available	583	Open in IMG/M
3300030503\|Ga0311370_10308082	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2044	Open in IMG/M
3300030503\|Ga0311370_12433235	Not Available	506	Open in IMG/M
3300030524\|Ga0311357_10134452	All Organisms → cellular organisms → Bacteria → Acidobacteria	2454	Open in IMG/M
3300031232\|Ga0302323_103312628	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300031236\|Ga0302324_100874390	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1240	Open in IMG/M
3300031708\|Ga0310686_104213620	Not Available	569	Open in IMG/M
3300031716\|Ga0310813_11669089	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300031753\|Ga0307477_10903288	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300031823\|Ga0307478_11320412	Not Available	599	Open in IMG/M
3300031938\|Ga0308175_101568168	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	736	Open in IMG/M
3300031942\|Ga0310916_10826907	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300032160\|Ga0311301_11807936	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300032770\|Ga0335085_10339811	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1764	Open in IMG/M
3300032805\|Ga0335078_10125590	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3666	Open in IMG/M
3300033807\|Ga0314866_081991	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300034163\|Ga0370515_0504031	Not Available	511	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.22%
Host-Associated	Host-Associated	2.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.07%
Aquatic	Environmental → Aquatic	23.15%
Plants	Host-Associated → Plants	2.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.81%
Freshwater	Environmental → Aquatic → Freshwater	14.81%
Peat	Environmental → Terrestrial → Peat	9.26%
Sediment	Environmental → Aquatic → Sediment	7.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.85%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.44%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.89%
Loam	Environmental → Terrestrial → Soil → Loam	11.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.26%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.41%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.26%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	7.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.48%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.63%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.78%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.78%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.85%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.85%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.93%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.93%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.93%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.93%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300015089	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8A, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025482	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033807	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_126447223	3300000789	Soil	QVSERFITLQDVTFELQRAQLGLLRSTGDLEKWALGK*
JGI12269J14319_100324691	3300001356	Peatlands Soil	SQASERFIALQDVTFELERAQLGLLRSTGDLERWALGTPQ*
JGI12269J14319_101185793	3300001356	Peatlands Soil	SQASERFIALQDVTFELERAQLGLLRSTGDLEKWALGTP*
JGI12712J15308_101171852	3300001471	Forest Soil	SEKFISLQDITLELERSQLGLLRVAGDLEKWALAGN*
JGI12635J15846_107517251	3300001593	Forest Soil	DARSQASERFITLQDVIFELERSQLGVLRSTGELEKWALGTP*
Ga0062386_1003542211	3300004152	Bog Forest Soil	RSQTSERFIALQDVTFELERAQLGLLRSTGDLEKWALGTP*
Ga0070683_1023024282	3300005329	Corn Rhizosphere	LDDARTQLSERFISLQDVNFELQRAQFGLMRSTGELEKWALGTQ*
Ga0073909_100157974	3300005526	Surface Soil	SQVSERFITLQDVTFELQRAQLGLLHSTGDLEKWALGK*
Ga0066701_100142365	3300005552	Soil	ADERFLALQDATFELERARINLLRSTGDLEKWALGGQ*
Ga0068855_1006788211	3300005563	Corn Rhizosphere	LSERFISLQDVNFELQRAQISLLRSTGDLEKWVLGTP*
Ga0070762_101603203	3300005602	Soil	ARSQVSERYIVLQDVTFELQRAQLGLLRSTGDLEKWALGK*
Ga0070762_104457532	3300005602	Soil	LARTQANEKLIALQDVTFDLERTQVEYLRATGKLESWALGSN*
Ga0070764_103938581	3300005712	Soil	ASERLITLQDVTFELERSQVALMRATGDLESWALGAK*
Ga0075029_1010583742	3300006052	Watersheds	QLSERFIALQDVTLELQRSQLGLLRSTGDLEKWALGPK*
Ga0075029_1013522821	3300006052	Watersheds	TQASERLIRLQDVTFELERSQVALLRATGNLESWALGSK*
Ga0075017_1005415593	3300006059	Watersheds	ARSQVSERFITLQNVTFELQRAQLGLLRSTGDLEKWALGK*
Ga0075017_1008454032	3300006059	Watersheds	DDARSQASERFIALQDVTFELGRAQLGLLRSTGDLEKWALGTP*
Ga0075015_1000078086	3300006102	Watersheds	QASERFMALQDVTFELERAQLGLLRSTGDLEKWALGTP*
Ga0075030_1010265022	3300006162	Watersheds	DLDDARTQASERFIALQDVTFELERSQVGVLRSTGDLEKWALGTP*
Ga0070765_1011730583	3300006176	Soil	DARTQASERLITLQDVTFELQRAQLGLLRSTGDLEKWALGK*
Ga0079221_111162222	3300006804	Agricultural Soil	RFIALQDVNFNLECSQLGLLRSTGDLEKWALGTK*
Ga0099793_106922512	3300007258	Vadose Zone Soil	SQASEHFIILQDVTFELQRSQITLLRSTGDLEKWALGSNN*
Ga0116218_13368572	3300009522	Peatlands Soil	ASERFIALQDVTFELERAQLGLLRFTGDLEKWALGTP*
Ga0116225_11322863	3300009524	Peatlands Soil	DDARSQASERFITLQDVIFELERSQVGILRSTGDLEKWALGTP*
Ga0105238_111487373	3300009551	Corn Rhizosphere	QLSERFISLQDVTFELQRAELGLMRSTGELEKWALGSQ*
Ga0116113_12100402	3300009638	Peatland	HDLDNAQTQASEKLIALQDVTFEVERNQVALLRANGNLESWALGTK*
Ga0116215_11595353	3300009672	Peatlands Soil	ERFIALQDVTFELERSQLGLLRSTGDLEKWALGTP*
Ga0116224_103528552	3300009683	Peatlands Soil	ARSQASERFIALQDVTFELERAQLGLLRSTGDLERWALGTPQ*
Ga0116219_102441991	3300009824	Peatlands Soil	QASERSIALQDVNFELERSQVGVLRSTGDLEKWALGTP*
Ga0116223_101724821	3300009839	Peatlands Soil	ASERFIALQDVTFELERAQLGLLRSTGDLERWALGTPQ*
Ga0126373_100566695	3300010048	Tropical Forest Soil	RFITLQDVTFELQRAQLGLLRSTGDLEKWALGTH*
Ga0126373_106948403	3300010048	Tropical Forest Soil	HDLDDARAQLSERFMTLQDVSFDLQRTQLGLLRSTGDLEKWALGTH*
Ga0126373_119185761	3300010048	Tropical Forest Soil	LDDARAQLSERFMTLQDVTFDLQRTQLGLLRSTGDLEKWALGTH*
Ga0126376_125486892	3300010359	Tropical Forest Soil	DLDDARSQMSERSITLQDVTFELQRAQLGLLRSTGDLEKWALGK*
Ga0126378_108047151	3300010361	Tropical Forest Soil	QLSERFMTLQDVSFDLQRTQLGLLRSTGDLEKWALGTH*
Ga0137365_105712952	3300012201	Vadose Zone Soil	DARSQASEHFITLQDVTFELQRSQVTLLRSTGDLEKWALGSNH*
Ga0137398_103688912	3300012683	Vadose Zone Soil	RAQASERFIALQDVLFELERTQVGLMRATGDLERWALGTP*
Ga0137359_103178981	3300012923	Vadose Zone Soil	RTQSSERFIALQDVTFELERTQVALMRATGDLEIWALK*
Ga0164306_110170172	3300012988	Soil	LDDARSQASERFITLQDVTFELERSQLGLLRSTGDLEKWALGK*
Ga0134079_103939271	3300014166	Grasslands Soil	RSQVSERYIVLQDVTFELQRAELGLLRSTGDLEKWALGK*
Ga0182018_1000286517	3300014489	Palsa	RFITFQDVTFELERSQVSLLRATGDLESWALGSK*
Ga0181519_101708431	3300014658	Bog	ASERLIALQDVAFELERSQIALLRATGGLENWATGAP*
Ga0167643_10699031	3300015089	Glacier Forefield Soil	LDDARSQSSERFITLQDVTFELERSQLGMLRSTGDLERWALGTP*
Ga0167658_10513113	3300015195	Glacier Forefield Soil	RSQASERFIALQDVTFELERSQLGVLRSTGDLEKWALGTR*
Ga0187824_102207941	3300017927	Freshwater Sediment	SERFIALQDVTFELQRAQLGLLRTTGDLEKWALGTP
Ga0187825_104400141	3300017930	Freshwater Sediment	ASERFISLQDVAFELERTQVSLLRSTGDLEKWALGTN
Ga0187821_103710141	3300017936	Freshwater Sediment	ASERFIALQDVTFELQRAQLGLLRTTGDLEKWALGTP
Ga0187819_106508651	3300017943	Freshwater Sediment	QASERFIALQDVTFDLERAQLGLLRSTGDLEKWAMGTP
Ga0187817_105003341	3300017955	Freshwater Sediment	AMTQASERFIALQDISFGLQRSQVGLLRSMGDLEKWATGAN
Ga0187817_105607692	3300017955	Freshwater Sediment	IHDLADARSQVSERFIAMQDVTFELERAQLGLLRSTGDLEKWALGAH
Ga0187783_110697172	3300017970	Tropical Peatland	SQASERFITLQDVTFELEKGQVELMRATGALESWALGH
Ga0187782_108878452	3300017975	Tropical Peatland	QASERLIALQDTTFELERSQVALMHATGNLETWASGAK
Ga0187888_13678441	3300018008	Peatland	ARSQASERFITLQDVTFDLERSQVALLRAKGQLQAWAEGMK
Ga0187855_103321612	3300018038	Peatland	ERFITLQDVTFELERSQLGLLRSTGDLEHWALGPH
Ga0187858_106373971	3300018057	Peatland	ARTQSSEKLISLQDVTFELERTQVALLRATGSLETWALGTK
Ga0187772_100688334	3300018085	Tropical Peatland	SERFIALQDVTFELQRAQLGLLRSTGDLEKWALRAP
Ga0187771_100614905	3300018088	Tropical Peatland	ASERFIALQDVSFELERAQLGLLRSTGDLEKWALGSR
Ga0187770_103513742	3300018090	Tropical Peatland	LDDARSQLSERFITLQDVSFELQRAQLGLLRSTGDLETWALGGR
Ga0066655_114235451	3300018431	Grasslands Soil	ERFIALQDVSFELERSQVGLMRATGELERWAIGGR
Ga0066667_108891001	3300018433	Grasslands Soil	ASERFIALQDVSFELERSQVGLMRATGELERWAIGGR
Ga0066662_118383122	3300018468	Grasslands Soil	ERFISLQDVNFELQRAQLGLMRSTGELEKWALGTQ
Ga0215015_100599332	3300021046	Soil	DDARSQASEHFITLQDVTFELQRSQITLLRSTGDLEKWALGSSN
Ga0210404_108740211	3300021088	Soil	ERFIALQDVTFELERSQVTLLRSTGDLETWALGTK
Ga0210396_115058052	3300021180	Soil	ECLITLQDVTFQLERSQVALMRATGDLEAWALSTK
Ga0210386_104895563	3300021406	Soil	SERFITLQDVTFELERSQLGVLRSTGELEKWALGTP
Ga0210383_107827041	3300021407	Soil	SERLITLQDVTFELERSQVALLRATGDLEKWAMGIK
Ga0210402_100286817	3300021478	Soil	DLDDARSQVSERFIALQDVTFELERSQLGVLRSTGDLEKWALGMQ
Ga0213851_10758171	3300021860	Watersheds	LHDLDDARSQASERFITFQDVTFELERSQLGVMRSTGDLEKWALGTP
Ga0222729_10520331	3300022507	Soil	RSQASERFIALQDVTFELERSQLGLLRSTGDLEKWALGAP
Ga0212123_109511271	3300022557	Iron-Sulfur Acid Spring	DEADARNQVNERYNALQDSNFELERARITLLRSTGDLEKWAMGEN
Ga0208935_10377402	3300025414	Peatland	ASERLISLQDVSFELERSQVALLRATGDLEAWALGTK
Ga0208715_10830902	3300025482	Arctic Peat Soil	QASERFITLQDVTFELERSELGVLRSTGDLEKWALGTH
Ga0207692_104207831	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LDDARTQLSERFISLQDVNFELQRAQLGLMRSTGELEKWALGTQ
Ga0207661_111112841	3300025944	Corn Rhizosphere	QLSERFISLQDVNFELQRAQFGLMRSTGELEKWALGTQ
Ga0209265_10717333	3300026308	Soil	TQLSERFIALQDVTFELQRAQLALMRSTGDLEKWALGQ
Ga0209267_12822551	3300026331	Soil	DLADARTQADERFLALQDATFELERARINLLRSTGDLEKWALGGQ
Ga0209010_10257042	3300027370	Forest Soil	ASERFIILQDVSFELERNELGVLRSTGDLEKWALETP
Ga0209331_10122873	3300027603	Forest Soil	QASEHFITLQDVAFELQRSQITLLRSTGDLEKWALGSNN
Ga0209446_11127661	3300027698	Bog Forest Soil	AQASERLITLQDVTFELERSQVALLRATGDLESWALGTR
Ga0208989_101283912	3300027738	Forest Soil	DARSQASEHFITLQDVTFELERSQITLLRSTGDLEKWALGGNN
Ga0209772_101065622	3300027768	Bog Forest Soil	AQAQASERLITLQDVGFELERSQVALMRATGDLETWALGTK
Ga0209167_103605593	3300027867	Surface Soil	HELDDAHSQVGERFIALQDVTFELQRAQLGLLRATGELEKWVLGPR
Ga0209590_106566922	3300027882	Vadose Zone Soil	QASEHFIAFQDVTFELERSQVSLLRATGNLESWALGTK
Ga0209415_105376081	3300027905	Peatlands Soil	RDLDDARTQASERFIALQDVTFELERSQLGVLRSTGDLEKWALGTP
Ga0209698_105172121	3300027911	Watersheds	IHDLDDARSQASERYIALQDVTFELERAQLGLLRSTGELEKWALGTP
Ga0209698_109151482	3300027911	Watersheds	LHDLDDARTQASERFIALQDVTFELERSQVGVLRSTGDLEKWALGTP
Ga0265356_10212312	3300028017	Rhizosphere	ASERFITLQDVTFELERSQVALLRATGDLEHWVLGGK
Ga0302227_102882731	3300028795	Palsa	ERFIALQDVTFELERSQVEVLRSTGDLESWALGAK
Ga0311341_106758152	3300029908	Bog	LDSAQIQASERLITLQDVTFELERSQVALMRATGELETWALGPK
Ga0311359_105041582	3300029914	Bog	ERFISLQDVTFELERSQVELMRATGDLETWALGAK
Ga0311338_110457291	3300030007	Palsa	QASEHFIALQDVTLELQRSQLGVLRSTGELEKWALGTP
Ga0302181_104103662	3300030056	Palsa	SERLITLQDVTFELERSQVTLLRATGNLESWALGTK
Ga0311370_103080821	3300030503	Palsa	RFIALQDVTFNLQRTQLGLLRSTGDLEQWALGTSK
Ga0311370_124332351	3300030503	Palsa	QSSEKLIALQDVTFELERNQIALLRATGNLETWALGK
Ga0311357_101344524	3300030524	Palsa	ARSQASERFIALQDVTFELERSQVEVLRSTGDLESWALGAK
Ga0302323_1033126282	3300031232	Fen	ERFIALQDVSFELERANLGLMRATGDLEKWALGGR
Ga0302324_1008743901	3300031236	Palsa	AQTQASERLITLQDVTFELERSQIALLRATGNLESWALGSK
Ga0310686_1042136202	3300031708	Soil	SIASERLITLQDVTFELERSQVALLRATGDLEKWAMGSK
Ga0310813_116690891	3300031716	Soil	DARTQVSERFIALQDVNFNLECSQLGLLRSTGDLEKWALGTK
Ga0307477_109032882	3300031753	Hardwood Forest Soil	DARSQASERFITLQDVTFELERSQLGVLRSTGDLEKWALGTP
Ga0307478_113204122	3300031823	Hardwood Forest Soil	QANEKLIVLQDVTFELERSQVALLRATGGLEGWALGSK
Ga0308175_1015681683	3300031938	Soil	TQFSERFIALQDVTFELQRAQLGLLRSTGELEKWALGTH
Ga0310916_108269071	3300031942	Soil	LHDLDDARAQVSERFITLQDVTFELQRAQLGLLRSTGDLEKWALGK
Ga0311301_118079363	3300032160	Peatlands Soil	SEASERFIALQDVIFELERAQLGLLRSTGDLEKWALGNP
Ga0335085_103398111	3300032770	Soil	DNARALVRERFITLQDVTFELQRAQLGLIRSTGDLEKWALGK
Ga0335078_101255906	3300032805	Soil	RTQASERFIALQDITFELERSEVGLMRSTGELEKWAMGR
Ga0314866_081991_2_118	3300033807	Peatland	RSQASEKFIALQDVTFELERAQLGLLRSTGELEKWVMR
Ga0370515_0504031_3_131	3300034163	Untreated Peat Soil	DDARSKASEHSITLEDIIFELERSQVALLRATGDLEKWAMGQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090644

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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