Metagenome / Metatranscriptome Family F090690

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090690
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	55 residues
Representative Sequence	KEYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Number of Associated Samples	99
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.78 %
% of genes near scaffold ends (potentially truncated)	97.22 %
% of genes from short scaffolds (< 2000 bps)	96.30 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.296 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (10.185 % of family members)
Environment Ontology (ENVO)	Unclassified (29.630 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.519 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.00% β-sheet: 0.00% Coil/Unstructured: 85.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF01476	LysM	38.89
PF07719	TPR_2	4.63
PF13432	TPR_16	1.85
PF05552	TM_helix	1.85
PF01522	Polysacc_deac_1	0.93
PF00691	OmpA	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	1.85
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	1.85
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	87.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.56 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	87.04 %
Unclassified	root	N/A	3.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	87.04 %
Unclassified	root	N/A	3.70 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	33.33 %
Unclassified	root	N/A	3.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	33.33 %
Unclassified	root	N/A	3.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003324\|soilH2_10361250	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1222	Open in IMG/M
3300003503\|JGI26141J51220_1002662	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1091	Open in IMG/M
3300004281\|Ga0066397_10175233	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	505	Open in IMG/M
3300005179\|Ga0066684_10812329	All Organisms → cellular organisms → Bacteria → Proteobacteria	617	Open in IMG/M
3300005183\|Ga0068993_10283251	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	595	Open in IMG/M
3300005332\|Ga0066388_101592123	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1149	Open in IMG/M
3300005332\|Ga0066388_104951259	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	677	Open in IMG/M
3300005332\|Ga0066388_105862605	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	621	Open in IMG/M
3300005335\|Ga0070666_10231757	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1304	Open in IMG/M
3300005343\|Ga0070687_101349635	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	531	Open in IMG/M
3300005345\|Ga0070692_10852306	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	626	Open in IMG/M
3300005439\|Ga0070711_100443821	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1061	Open in IMG/M
3300005445\|Ga0070708_100385841	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1321	Open in IMG/M
3300005457\|Ga0070662_100098541	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2208	Open in IMG/M
3300005536\|Ga0070697_100372614	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1235	Open in IMG/M
3300005546\|Ga0070696_100491551	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	975	Open in IMG/M
3300005546\|Ga0070696_101847691	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	523	Open in IMG/M
3300005547\|Ga0070693_100092838	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1823	Open in IMG/M
3300005557\|Ga0066704_10645172	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	674	Open in IMG/M
3300005577\|Ga0068857_100777332	All Organisms → cellular organisms → Bacteria → Proteobacteria	913	Open in IMG/M
3300005764\|Ga0066903_101291783	Not Available	1362	Open in IMG/M
3300006175\|Ga0070712_101557979	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	578	Open in IMG/M
3300006755\|Ga0079222_12367103	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	531	Open in IMG/M
3300006845\|Ga0075421_100691274	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1187	Open in IMG/M
3300006852\|Ga0075433_10402820	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1207	Open in IMG/M
3300006854\|Ga0075425_101062748	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	923	Open in IMG/M
3300006880\|Ga0075429_100482534	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1086	Open in IMG/M
3300006904\|Ga0075424_102133764	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	590	Open in IMG/M
3300006914\|Ga0075436_100107821	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1943	Open in IMG/M
3300006969\|Ga0075419_11314150	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	537	Open in IMG/M
3300009090\|Ga0099827_10578399	All Organisms → cellular organisms → Bacteria → Proteobacteria	968	Open in IMG/M
3300009100\|Ga0075418_10282844	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1767	Open in IMG/M
3300009148\|Ga0105243_10160392	All Organisms → cellular organisms → Bacteria	1938	Open in IMG/M
3300009162\|Ga0075423_11297286	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	778	Open in IMG/M
3300009162\|Ga0075423_12032947	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	622	Open in IMG/M
3300009177\|Ga0105248_11309336	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	820	Open in IMG/M
3300009177\|Ga0105248_11860578	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	683	Open in IMG/M
3300009296\|Ga0103681_1215565	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	759	Open in IMG/M
3300009678\|Ga0105252_10393130	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	634	Open in IMG/M
3300009795\|Ga0105059_1051716	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	549	Open in IMG/M
3300009804\|Ga0105063_1050456	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	594	Open in IMG/M
3300009814\|Ga0105082_1119880	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	512	Open in IMG/M
3300009837\|Ga0105058_1046519	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	965	Open in IMG/M
3300010047\|Ga0126382_11986536	Not Available	553	Open in IMG/M
3300010329\|Ga0134111_10341525	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	631	Open in IMG/M
3300010400\|Ga0134122_12395691	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	575	Open in IMG/M
3300011119\|Ga0105246_11292648	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	676	Open in IMG/M
3300011270\|Ga0137391_10903081	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	723	Open in IMG/M
3300011271\|Ga0137393_10496518	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1047	Open in IMG/M
3300011414\|Ga0137442_1104066	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	619	Open in IMG/M
3300011435\|Ga0137426_1137946	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	709	Open in IMG/M
3300012134\|Ga0137330_1021943	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	783	Open in IMG/M
3300012202\|Ga0137363_11759634	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	512	Open in IMG/M
3300012351\|Ga0137386_11067552	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	571	Open in IMG/M
3300012929\|Ga0137404_10663183	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	941	Open in IMG/M
3300012971\|Ga0126369_12874602	Not Available	564	Open in IMG/M
3300014325\|Ga0163163_10952470	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	922	Open in IMG/M
3300014968\|Ga0157379_11112149	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	757	Open in IMG/M
3300015245\|Ga0137409_11460588	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	531	Open in IMG/M
3300015258\|Ga0180093_1095859	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	723	Open in IMG/M
3300015264\|Ga0137403_10622566	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	943	Open in IMG/M
3300015371\|Ga0132258_11192437	All Organisms → cellular organisms → Bacteria → Proteobacteria	1925	Open in IMG/M
3300018054\|Ga0184621_10062644	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1265	Open in IMG/M
3300018054\|Ga0184621_10336380	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	531	Open in IMG/M
3300018063\|Ga0184637_10693243	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	558	Open in IMG/M
3300018076\|Ga0184609_10164717	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1024	Open in IMG/M
3300018422\|Ga0190265_10466930	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1370	Open in IMG/M
3300019487\|Ga0187893_10165995	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1762	Open in IMG/M
3300019487\|Ga0187893_10844829	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	552	Open in IMG/M
3300019870\|Ga0193746_1027299	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	587	Open in IMG/M
3300019883\|Ga0193725_1019145	All Organisms → cellular organisms → Bacteria → Proteobacteria	1878	Open in IMG/M
3300020581\|Ga0210399_10115553	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2202	Open in IMG/M
3300021432\|Ga0210384_11885167	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	503	Open in IMG/M
3300021560\|Ga0126371_10701713	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1160	Open in IMG/M
3300025322\|Ga0209641_10227595	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1392	Open in IMG/M
3300025580\|Ga0210138_1189056	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300025910\|Ga0207684_10674102	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	880	Open in IMG/M
3300025916\|Ga0207663_11719067	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	505	Open in IMG/M
3300025932\|Ga0207690_11297398	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	608	Open in IMG/M
3300025935\|Ga0207709_10972734	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	693	Open in IMG/M
3300025937\|Ga0207669_11499685	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	575	Open in IMG/M
3300025957\|Ga0210089_1037046	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300026088\|Ga0207641_10330070	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1449	Open in IMG/M
3300026297\|Ga0209237_1026600	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3215	Open in IMG/M
3300026316\|Ga0209155_1276126	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	521	Open in IMG/M
3300026475\|Ga0257147_1033031	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	748	Open in IMG/M
3300026532\|Ga0209160_1219314	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	672	Open in IMG/M
3300027122\|Ga0207538_1003680	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	816	Open in IMG/M
3300027577\|Ga0209874_1119488	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	615	Open in IMG/M
3300027874\|Ga0209465_10550652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300027909\|Ga0209382_10609770	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1187	Open in IMG/M
(restricted) 3300027995\|Ga0233418_10172010	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	700	Open in IMG/M
3300028381\|Ga0268264_11258681	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	750	Open in IMG/M
3300028884\|Ga0307308_10494254	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	587	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1030682	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1121	Open in IMG/M
3300031538\|Ga0310888_10314325	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300031720\|Ga0307469_11202783	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	716	Open in IMG/M
3300031740\|Ga0307468_100308151	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1154	Open in IMG/M
3300031820\|Ga0307473_11142721	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	576	Open in IMG/M
3300031820\|Ga0307473_11490814	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	512	Open in IMG/M
3300031854\|Ga0310904_11031210	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	587	Open in IMG/M
3300031854\|Ga0310904_11209406	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	545	Open in IMG/M
3300031890\|Ga0306925_10064898	All Organisms → cellular organisms → Bacteria	3836	Open in IMG/M
3300031962\|Ga0307479_11326337	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	680	Open in IMG/M
3300032180\|Ga0307471_100612792	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1248	Open in IMG/M
3300032205\|Ga0307472_102453178	Not Available	530	Open in IMG/M
3300032783\|Ga0335079_11948496	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	567	Open in IMG/M
3300034354\|Ga0364943_0423522	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	517	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.00%
Host-Associated	Host-Associated	25.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.04%
Plants	Host-Associated → Plants	25.00%
Aquatic	Environmental → Aquatic	12.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.44%
Sediment	Environmental → Aquatic → Sediment	8.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.63%
Marine	Environmental → Aquatic → Marine	2.78%
Freshwater	Environmental → Aquatic → Freshwater	1.85%
Cave	Environmental → Terrestrial → Cave	1.85%
Floodplain	Environmental → Terrestrial → Floodplain	0.93%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.19%
Loam	Environmental → Terrestrial → Soil → Loam	17.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.33%
Sand	Environmental → Terrestrial → Soil → Sand	5.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.70%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.85%
Lake	Environmental → Aquatic → Freshwater → Lake	0.93%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.56%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	5.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.85%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.93%
Chlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.41%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.56%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.63%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.70%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.78%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.85%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated → Groundwater	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.93%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.93%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003503	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM	Host-Associated	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009296	Microbial communities from groundwater in Rifle, Colorado, USA-3A_0.2um	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009795	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011414	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300012134	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT142_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300019870	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m1	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025580	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025957	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027122	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-11 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027995 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_1_MG	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
soilH2_103612501	3300003324	Sugarcane Root And Bulk Soil	GSQDDTVVQWTREAGYTAAFTVRPQANPSFVEPLRIHRTQIFSEMSLDDFTRYLNIYNSEKLR*
JGI26141J51220_10026621	3300003503	Arabidopsis Thaliana Rhizosphere	AAFSVRRQGNASFVRPLTGHRSQIYSEMTLDDFVRNLNVFQEENLR*
Ga0066397_101752332	3300004281	Tropical Forest Soil	AFTVRRQGSPAFVSPLRGHRSQIYSEMTLEDFIKNLNVFATEELK*
Ga0066684_108123292	3300005179	Soil	KKVREHGYIAAFSVRREGNASFVPPLRIHRSQIYSEMTIEEFAKSLDVFQKEAFQ*
Ga0068993_102832511	3300005183	Natural And Restored Wetlands	FTVRRQGNPSFVEPLRIHRSQIYSEMSLDDFIKNLNFYNTESLK*
Ga0066388_1015921231	3300005332	Tropical Forest Soil	PYGRWDEELLKKVKEAGYVAAFTVRRQGNASFVFPLRGHRSQIYSEMSMEDFARNLNVYQQEDLR*
Ga0066388_1049512592	3300005332	Tropical Forest Soil	EYGYAAGFSVRRQGNASFIRPLTGNRSQVYSEMTMEDFAKNLNVYQEETLK*
Ga0066388_1058626051	3300005332	Tropical Forest Soil	TKERGYAAAFTVRRQGNPSFVQPLRIHRSQIYSEMNMDDFIKNLNFYNTESLK*
Ga0070666_102317572	3300005335	Switchgrass Rhizosphere	EEGLLPKVQQYGYVAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVYQEENLR
Ga0070687_1013496352	3300005343	Switchgrass Rhizosphere	RWEEGLLPKVKEYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0070692_108523061	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	DVVRKTKEYGYIAAFTVRRQGSPAFVSPLRGHRSQIYSEMTLEDFIKNLNVFATEELK*
Ga0070711_1004438211	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GLLPKVKEYGYIAAFSVGRECITTYVRPLAAHRSQIYAEMTLDDFVKNLNVFQEENLR*
Ga0070708_1003858411	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SLLGKAIEHGYVAGFSVRRQGNGSFIRLLAGNRSQIYSEMTLDDFAKNLNVYQRESLVEPAK*
Ga0070662_1000985411	3300005457	Corn Rhizosphere	AAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVYQEENLR*
Ga0070697_1003726142	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	KVKEYGYVAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0070696_1004915512	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	SVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEESLR*
Ga0070696_1018476912	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	AFTVRRESNASFVRPLEINRSQIYSEMTLEQFAKNLNLFHQENLR*
Ga0070693_1000928383	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	EEGLLPKVKEYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0066704_106451722	3300005557	Soil	ESLLSKLAEYGYVAGFSVRRQGNASFVRPFVGNRSQIYSEMTLEDFVKNLNVYQQEDLK*
Ga0068857_1007773322	3300005577	Corn Rhizosphere	DVVRAVRENGYAAAFTVRREGNPSFVAPLRGHRSQIYGEMTLQDFIKNLEVRHEEKLVD*
Ga0066903_1012917831	3300005764	Tropical Forest Soil	SLLSRLAEYGYTTGFSVRRQGNASFVRPLAANRSQIYSEMTMDDFIKNLNVYQEESLK*
Ga0070712_1015579792	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	YPYGRWEEGLLPKVKEYGYIAAFSVRRQGNASFVRPLAAHRSQIYAEMTLDDFVKNLNVFQEENLR*
Ga0079222_123671032	3300006755	Agricultural Soil	YGYIAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0075421_1006912742	3300006845	Populus Rhizosphere	AAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0075433_104028202	3300006852	Populus Rhizosphere	RGYVAALTVRRQGNPSFVEPLRIHRSQIYSEMSLDDFIKNLNFYNTESLK*
Ga0075425_1010627482	3300006854	Populus Rhizosphere	RTKERGYVAALTVRRQGNPSFVEPLRIHRSQIYSEMSLDDFIKNLNFYNTESLK*
Ga0075429_1004825342	3300006880	Populus Rhizosphere	YGYIAAFTVRRQGSPAFVFPLRGHRSQIYSEMTLEDFVKNLDVFAAEELK*
Ga0075424_1021337641	3300006904	Populus Rhizosphere	KVAEHGYAAGFSVRRQGNASFARPLAGSRSQIYSEMTLEDFVKNLNLYQQENLK*
Ga0075436_1001078213	3300006914	Populus Rhizosphere	LPKVQQYGYVAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0075419_113141501	3300006969	Populus Rhizosphere	KVQQYGYIAAFSVRRQGNAKNVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0099827_105783992	3300009090	Vadose Zone Soil	VKKVREHGYIAAFSVRREGNASFVHPLRIHRSQIYSDMTIEEFAKSLDVFQKEAFQ*
Ga0075418_102828443	3300009100	Populus Rhizosphere	GYIAAFTVRRQGSPAFVSPLRGHRSQIYSEMTLEDFIKNLNVFATEELK*
Ga0105243_101603921	3300009148	Miscanthus Rhizosphere	GYVAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVYQEENLR*
Ga0075423_112972861	3300009162	Populus Rhizosphere	IIAYPYGSWDESLLGQIAEYGYVNDFSVSRQGNASLVRPLASKPSQIYSEMTMDDFIKNLNVYQEESLK*
Ga0075423_120329472	3300009162	Populus Rhizosphere	LPKVKEYGYIAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0105248_113093362	3300009177	Switchgrass Rhizosphere	FTVRPQANPSFVEPLRIHRTQIFSEMSLDDFTKYLNIFNSEKLQ*
Ga0105248_118605782	3300009177	Switchgrass Rhizosphere	FPYGSWDESLLGKAIEHGYVAGFSVRRQGNGSFIRLLAGNRSQIYSEMTLDDFAKNLNVYQRESLVEPAK*
Ga0103681_12155651	3300009296	Groundwater	SVRRQGNPSFIHPIKINRSQIYSEMSLSEFIKNLNVFSQEAIQ*
Ga0105252_103931302	3300009678	Soil	KEFGYTAAFTVRRQGSPAFVSPLRGHRSQIYSEMTLEDFVKNLDVFASEELK*
Ga0105059_10517162	3300009795	Groundwater Sand	GLLPKVKEYGYVAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0105063_10504561	3300009804	Groundwater Sand	GYVAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0105082_11198801	3300009814	Groundwater Sand	AAALDVRRQGNPSFGLPVTLHRSQIYSEMSLQDFAKNLNVFNQEVVK*
Ga0105058_10465192	3300009837	Groundwater Sand	ALDVRRQGNPSFGLPLTLHRSQIYSEMSLQDFAKNLNVFNQEVVK*
Ga0126382_119865362	3300010047	Tropical Forest Soil	AEYGYTAGFSVRRQGNASFVRPLAANRSQIYSEMTMDDFIKNLNVYQEESLK*
Ga0134111_103415252	3300010329	Grasslands Soil	MAGFSVRRQGNAAFVRPLAGNRSQIYSEMTLEYLVKNLNDYPQESLK*
Ga0134122_123956912	3300010400	Terrestrial Soil	VAGFSVRRQGNGSFIRLLAGNRSQIYSEMTLDDFAKNLNVYQRESLVEPAK*
Ga0105246_112926481	3300011119	Miscanthus Rhizosphere	DVVKKAKEYGYIAAFTVRRQGSPAFVSPLRGHRSQIYSEMTLEDFVKNLDVFAAEELK*
Ga0137391_109030812	3300011270	Vadose Zone Soil	LGEYGYLAGFSVRRQGNASFVRPLAGNRSQIYSEMTLEDFVKNLNVYQQESLK*
Ga0137393_104965181	3300011271	Vadose Zone Soil	GYVAAFTVLRQGNPSFVESLRIHRSQIYSEMSLEDFIKNLNFYNTESLK*
Ga0137442_11040661	3300011414	Soil	PYGRWEEGLLPKVKEYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0137426_11379462	3300011435	Soil	SVRRQGNGSFIRPLAGNRSQIYSEMTLDDFAKNLNVYQRESLVEPAK*
Ga0137330_10219432	3300012134	Soil	GRWEEGLLPKVKEYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0137363_117596341	3300012202	Vadose Zone Soil	PKVKEYGYIAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0137386_110675522	3300012351	Vadose Zone Soil	GYVAGFSVRRQGNASFVRPLAGNRSQIYSEMTLEDFVKNLNVYQQESLK*
Ga0137404_106631831	3300012929	Vadose Zone Soil	RLLANSSMVMHGYIAAFSVRREGNASFVPPLRIHRSQIYSEMTIEEFAKSLDVFQKEAFQ
Ga0126369_128746022	3300012971	Tropical Forest Soil	YGYTAGFSVRRQGNASFVRPLAANRSQIYSEMTMDDFIKNLNVYQEESLK*
Ga0163163_109524702	3300014325	Switchgrass Rhizosphere	WEEGLLPKVQQYGYVAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVYQEENLR*
Ga0157379_111121491	3300014968	Switchgrass Rhizosphere	YGRWEEGLLPKVKEYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0137409_114605881	3300015245	Vadose Zone Soil	AFPYGSWDESLLGKASEHGYVAGFSVRRQGNGSFIRLLAGNRSQIYSEMTLDDFAKNLNVYQQESLVEPAK*
Ga0180093_10958592	3300015258	Soil	RQDDEVVKKAKEFGYTAAFTVRRQGSPAFVSPLRGHRSQIYSEMTLEDFVKNLDVFASEELK*
Ga0137403_106225662	3300015264	Vadose Zone Soil	VKKVREHGYIAAFSVRREGNASFVPPLRIHRSQIYSEMTIEEFAKSLDVFQKEAFQ*
Ga0132258_111924373	3300015371	Arabidopsis Rhizosphere	LPKVKEHGYIAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR*
Ga0184621_100626443	3300018054	Groundwater Sediment	VKEYGYSAAFSVRRQGNASFVRSLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0184621_103363802	3300018054	Groundwater Sediment	GRWEEGLLPKVKEYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0184637_106932431	3300018063	Groundwater Sediment	IIAFPYGSWDESLLGKAIEHGYVAGFSVRRQGNGSFIRLLAGNRSQIYSEMTLDDFAKNLNVYQQESLVEPAK
Ga0184609_101647172	3300018076	Groundwater Sediment	AAFSVRRQGNASFVRSLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0190265_104669301	3300018422	Soil	VVKKAKEYGYIAAFTVRRQGSPAFVSPLRGHRSQIYSEMTLEDFIKNLNVFAAEELK
Ga0187893_101659953	3300019487	Microbial Mat On Rocks	AGFTVRRQGNASFVRPLVANRSQIYSEMTLEEFIKNLNVFQPESLK
Ga0187893_108448291	3300019487	Microbial Mat On Rocks	KEYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0193746_10272991	3300019870	Soil	AFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0193725_10191453	3300019883	Soil	YGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0210399_101155534	3300020581	Soil	VKEYGYIAAFSVRRQGNASFVRSLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0210384_118851671	3300021432	Soil	LAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0126371_107017132	3300021560	Tropical Forest Soil	YGYIAGFSVRRQGNASFVRPLAANRSQFYSEMSLDDFVKNLNVYQEESLK
Ga0209641_102275952	3300025322	Soil	REFGYEAAFTVRREGNPAFVAPFSAHRSQIYSDMTLEEFTKTLNVFSPEHLQ
Ga0210138_11890562	3300025580	Natural And Restored Wetlands	YVAAFTVRRQGNPSFVEPLRIHRSQIYSEMSLDDFIKNLNFYNTESLK
Ga0207684_106741021	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	YGSWDESLLGKAIEHGYVAGFSVRRQGNGSFIRMLAGNRSQIYSEMTLDDFAKNLNVYQRESLVEPAQ
Ga0207663_117190671	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	GYIAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0207690_112973981	3300025932	Corn Rhizosphere	IEHGYVAGFSVRRQGNGSFIRLLAGNRSQIYSEMTLDDFAKNLNVYQRESLVEPAK
Ga0207709_109727341	3300025935	Miscanthus Rhizosphere	QYGYVAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVYQEENLR
Ga0207669_114996851	3300025937	Miscanthus Rhizosphere	YIAALDVRRQGNPSFTPTLTIHRAQVYSEMTLDDFIRNLTVFSEETIR
Ga0210089_10370462	3300025957	Natural And Restored Wetlands	GYVAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0207641_103300701	3300026088	Switchgrass Rhizosphere	LGKAIEHGYVAGFSVRRQGNGSFIRLLAGNRSQIYSEMTLDDFAKNLNVYQRESLVEPAK
Ga0209237_10266004	3300026297	Grasslands Soil	EHGYIAAFSVRREGNASFVPPLRIHRSQIYSEMTIEEFAKSLDVFQKEAFQ
Ga0209155_12761262	3300026316	Soil	PIVAYPYGSWDESLLSKLAEYGYVAGFSVRRQGNASFVRRLVGNRSQIYSEMTLEDFVKNLNVYQQQDLK
Ga0257147_10330312	3300026475	Soil	FSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0209160_12193141	3300026532	Soil	ESLLSKLAEYGYVAGFSVRRQGNASFVRPFVGNRSQIYSEMTLEDFVKNLNVYQQEDLK
Ga0207538_10036801	3300027122	Soil	GLLPKVTEHGYIAAFSVRRQGNASFVRPLTGHRSQIYSEMTLDDFVRNLNVFQEENLR
Ga0209874_11194881	3300027577	Groundwater Sand	ALDVRRQGNPSFGLPLTLHRSQIYSEMSLQDFAKNLNVFNQEVVK
Ga0209465_105506521	3300027874	Tropical Forest Soil	VLAKAGEAGYVAGFSVRRQGDAAFVRPLAGTRSQIYSEMTMEDFEKNLNVFQPENLK
Ga0209382_106097701	3300027909	Populus Rhizosphere	AAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
(restricted) Ga0233418_101720102	3300027995	Sediment	VKEYGYIAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVRNLNVFQEENLR
Ga0268264_112586812	3300028381	Switchgrass Rhizosphere	RRADIIAFPYGSWDESLLGKAIEHGYVAGFSVRRQGNGSFIRLLAGNRSQIYSEMTLDDFAKNLNVYQRESLVEPAK
Ga0307308_104942541	3300028884	Soil	PKVKEYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
(restricted) Ga0255311_10306821	3300031150	Sandy Soil	LPKVKEYGYIAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0310888_103143251	3300031538	Soil	EGLLPRVKEHGYVAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0307469_112027831	3300031720	Hardwood Forest Soil	EGLLPKVKEYGYIAAFSVRRQGNASFVRPLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0307468_1003081511	3300031740	Hardwood Forest Soil	GYIAAFSVRRQGNASFVRPLAAHRSQIYAEMTLDDFVKNLNVFQEENLR
Ga0307473_111427212	3300031820	Hardwood Forest Soil	GAPRRIIAFPYGSWDEAVLSKLGEYGYSAAFSVRRQGNSSFIRPLAGNRSQVYSEMSMEDFIKNLNVYQQESLK
Ga0307473_114908141	3300031820	Hardwood Forest Soil	GYIAAFSVRRQCNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0310904_110312102	3300031854	Soil	AYPYGRWEEGLLPKVTEHGYIAAFSVRRQGNATFVRPLTGHRSQIYSEMTLDDFVRNLNVFQEENLR
Ga0310904_112094061	3300031854	Soil	KEYGYIAAFTVRRQGSPAFVSPLRGHRSQIYSEMTLEDFVKNLNVFAAEELK
Ga0306925_100648984	3300031890	Soil	LDVRRQGNPSFAQLLAIHRSQIYSEMTLEDFAKNLNTFNQEVIK
Ga0307479_113263372	3300031962	Hardwood Forest Soil	YGYIAAFSVRRQGNASFVRSLAGHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0307471_1006127921	3300032180	Hardwood Forest Soil	PYGRWEEGLLPKVKEYGYIAAFSVRRQGNASFVRPLAAHRSQIYSEMTLDDFVKNLNVFQEENLR
Ga0307472_1024531781	3300032205	Hardwood Forest Soil	AGFTVRRQGNGSFIRLLAGNRSQIYSEMTLDDFAKNLNVYQQEPLVEAAK
Ga0335079_119484961	3300032783	Soil	VLQRTKERGYVAAFTVRRQGNPSFVQPLRIHRSQIYSEMTLEDFIKNLNFYNTESLK
Ga0364943_0423522_2_175	3300034354	Sediment	VLGKAGEYGYMAGFSVRRQGNASFIRPLAGSRSQIYSEMTLDDFVKNLNVFQEENLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters