NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F090929

Metagenome / Metatranscriptome Family F090929

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090929
Family Type Metagenome / Metatranscriptome
Number of Sequences 108
Average Sequence Length 62 residues
Representative Sequence VTDVAHAHDHHAAPPAPTGYHRLTAPGWLRVLWVTPLFFGIGLGLPVLIRWLAHWDPVWK
Number of Associated Samples 99
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 91.67 %
% of genes near scaffold ends (potentially truncated) 97.22 %
% of genes from short scaffolds (< 2000 bps) 95.37 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (74.074 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(12.037 % of family members)
Environment Ontology (ENVO) Unclassified
(27.778 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.370 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 35.23%    β-sheet: 0.00%    Coil/Unstructured: 64.77%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF00034Cytochrom_C 37.04
PF02790COX2_TM 21.30
PF00116COX2 20.37
PF13442Cytochrome_CBB3 10.19
PF05534HicB 0.93
PF07715Plug 0.93
PF07676PD40 0.93
PF12706Lactamase_B_2 0.93
PF08031BBE 0.93
PF02518HATPase_c 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG1622Heme/copper-type cytochrome/quinol oxidase, subunit 2Energy production and conversion [C] 41.67
COG4263Nitrous oxide reductaseInorganic ion transport and metabolism [P] 20.37
COG0277FAD/FMN-containing lactate dehydrogenase/glycolate oxidaseEnergy production and conversion [C] 0.93
COG1598Antitoxin component HicB of the HicAB toxin-antitoxin systemDefense mechanisms [V] 0.93
COG4226Predicted nuclease of the RNAse H fold, HicB familyGeneral function prediction only [R] 0.93

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms74.07 %
UnclassifiedrootN/A25.93 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459010|GIO7OMY02IQA99All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium510Open in IMG/M
3300001305|C688J14111_10034408All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1515Open in IMG/M
3300001398|JGI20207J14881_1075945All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300001538|A10PFW1_11031134All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1065Open in IMG/M
3300001686|C688J18823_10149485All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter1603Open in IMG/M
3300004081|Ga0063454_100835391All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300005093|Ga0062594_101218003All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia748Open in IMG/M
3300005179|Ga0066684_10763572All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300005338|Ga0068868_101133834All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia721Open in IMG/M
3300005347|Ga0070668_101844868All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia556Open in IMG/M
3300005355|Ga0070671_101680815All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia563Open in IMG/M
3300005435|Ga0070714_101002149Not Available813Open in IMG/M
3300005455|Ga0070663_101276859All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium647Open in IMG/M
3300005456|Ga0070678_100232995All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli1536Open in IMG/M
3300005468|Ga0070707_100831596Not Available887Open in IMG/M
3300005533|Ga0070734_10865622All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria512Open in IMG/M
3300005549|Ga0070704_101209680All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium689Open in IMG/M
3300005614|Ga0068856_100295922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1636Open in IMG/M
3300006028|Ga0070717_11225841Not Available683Open in IMG/M
3300006163|Ga0070715_10298288Not Available861Open in IMG/M
3300006175|Ga0070712_100645684Not Available899Open in IMG/M
3300006638|Ga0075522_10113292Not Available1452Open in IMG/M
3300006755|Ga0079222_10115469All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1449Open in IMG/M
3300006806|Ga0079220_11687940All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium553Open in IMG/M
3300006806|Ga0079220_12052890All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium511Open in IMG/M
3300006881|Ga0068865_101649892All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium577Open in IMG/M
3300009012|Ga0066710_103000103All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium657Open in IMG/M
3300009098|Ga0105245_12376621All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium584Open in IMG/M
3300009137|Ga0066709_103442093All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium574Open in IMG/M
3300009177|Ga0105248_11173622Not Available868Open in IMG/M
3300009551|Ga0105238_10587324Not Available1121Open in IMG/M
3300009792|Ga0126374_10869494All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium695Open in IMG/M
3300010119|Ga0127452_1139473Not Available565Open in IMG/M
3300010375|Ga0105239_10335040Not Available1707Open in IMG/M
3300010396|Ga0134126_12121056All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300011107|Ga0151490_1119006All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300011997|Ga0120162_1026904Not Available1682Open in IMG/M
3300011999|Ga0120148_1044480All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium915Open in IMG/M
3300012001|Ga0120167_1101538All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium588Open in IMG/M
3300012014|Ga0120159_1012639All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3435Open in IMG/M
3300012212|Ga0150985_101679832All Organisms → cellular organisms → Bacteria → Terrabacteria group677Open in IMG/M
3300012469|Ga0150984_116436287All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1004Open in IMG/M
3300012951|Ga0164300_10073105All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli1431Open in IMG/M
3300012957|Ga0164303_10721510All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium675Open in IMG/M
3300012958|Ga0164299_10735248All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300012958|Ga0164299_10843414All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium658Open in IMG/M
3300012958|Ga0164299_11649337All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium507Open in IMG/M
3300012971|Ga0126369_10395054Not Available1419Open in IMG/M
3300012984|Ga0164309_10387138Not Available1038Open in IMG/M
3300012985|Ga0164308_11535555All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium613Open in IMG/M
3300012987|Ga0164307_10386784Not Available1026Open in IMG/M
3300012988|Ga0164306_11410614All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300013104|Ga0157370_11008081Not Available754Open in IMG/M
3300013104|Ga0157370_12074857All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300013105|Ga0157369_11835214All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium616Open in IMG/M
3300013765|Ga0120172_1093671All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300014052|Ga0120109_1121578All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300015261|Ga0182006_1280212All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300015374|Ga0132255_101917709Not Available901Open in IMG/M
3300016387|Ga0182040_11390260All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300017973|Ga0187780_10348297All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1046Open in IMG/M
3300018468|Ga0066662_10093884All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2100Open in IMG/M
3300020069|Ga0197907_10407437All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300020078|Ga0206352_10091829All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium570Open in IMG/M
3300020078|Ga0206352_10878658Not Available1164Open in IMG/M
3300020081|Ga0206354_11367587All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300021953|Ga0213880_10206064All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium554Open in IMG/M
3300024331|Ga0247668_1115247All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium545Open in IMG/M
3300025905|Ga0207685_10242177Not Available868Open in IMG/M
3300025906|Ga0207699_11402680All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
3300025913|Ga0207695_11203827All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium638Open in IMG/M
3300025916|Ga0207663_10530519Not Available918Open in IMG/M
3300025920|Ga0207649_11497157All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300025921|Ga0207652_10816045Not Available828Open in IMG/M
3300025922|Ga0207646_10385782Not Available1265Open in IMG/M
3300025924|Ga0207694_11405191All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300025928|Ga0207700_10031081Not Available3790Open in IMG/M
3300025928|Ga0207700_11658535All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300025930|Ga0207701_11236848All Organisms → cellular organisms → Bacteria → Proteobacteria614Open in IMG/M
3300025939|Ga0207665_10538976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium906Open in IMG/M
3300025939|Ga0207665_11383578All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium560Open in IMG/M
3300025944|Ga0207661_11802353All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium557Open in IMG/M
3300025949|Ga0207667_10031981All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5675Open in IMG/M
3300025949|Ga0207667_11471759All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300025972|Ga0207668_11533570All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia601Open in IMG/M
3300025981|Ga0207640_12076361All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300026121|Ga0207683_11336322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium663Open in IMG/M
3300026142|Ga0207698_11713290All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300028654|Ga0265322_10198477All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium574Open in IMG/M
3300028811|Ga0307292_10529573All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium506Open in IMG/M
3300028872|Ga0307314_10049872Not Available1048Open in IMG/M
3300028876|Ga0307286_10329158All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium567Open in IMG/M
3300030785|Ga0102757_11207345All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300031226|Ga0307497_10150461Not Available966Open in IMG/M
3300031231|Ga0170824_100121157All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300031544|Ga0318534_10074449All Organisms → cellular organisms → Bacteria1925Open in IMG/M
3300031564|Ga0318573_10056442All Organisms → cellular organisms → Bacteria1931Open in IMG/M
3300031719|Ga0306917_11527335All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300031740|Ga0307468_100748746Not Available825Open in IMG/M
3300031781|Ga0318547_10752245All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300031912|Ga0306921_10046600All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4912Open in IMG/M
3300031938|Ga0308175_103212914All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300031996|Ga0308176_11207937Not Available802Open in IMG/M
3300032954|Ga0335083_10766805All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium777Open in IMG/M
3300033289|Ga0310914_10412006Not Available1223Open in IMG/M
3300034268|Ga0372943_0723131Not Available658Open in IMG/M
3300034384|Ga0372946_0508143All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300034384|Ga0372946_0523980All Organisms → cellular organisms → Bacteria575Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.04%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere12.04%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.33%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost6.48%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.63%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere3.70%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.70%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.78%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.78%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.78%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.78%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.85%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.85%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.93%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.93%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.93%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.93%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.93%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.93%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.93%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.93%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.93%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.93%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.93%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.93%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.93%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459010Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)EnvironmentalOpen in IMG/M
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001398Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012EnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010119Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011107Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300011997Permafrost microbial communities from Nunavut, Canada - A15_80cm_18MEnvironmentalOpen in IMG/M
3300011999Permafrost microbial communities from Nunavut, Canada - A28_65cm_6MEnvironmentalOpen in IMG/M
3300012001Permafrost microbial communities from Nunavut, Canada - A24_80cm_12MEnvironmentalOpen in IMG/M
3300012014Permafrost microbial communities from Nunavut, Canada - A10_80cm_6MEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013765Permafrost microbial communities from Nunavut, Canada - A30_80cm_6MEnvironmentalOpen in IMG/M
3300014052Permafrost microbial communities from Nunavut, Canada - A23_35cm_12MEnvironmentalOpen in IMG/M
3300015261Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaGHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021953Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07EnvironmentalOpen in IMG/M
3300024331Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028654Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaGHost-AssociatedOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300030785Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M
3300034384Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F62_000962802170459010Grass SoilVTDVAHAHEHDLHASPPAPTGWHRWTAPGWLRVLWVTPLFFGIGIALPVLLRWAAGWEPFWKSSVIATVELVLTPLGFLVGIG
C688J14111_1003440833300001305SoilMTTTEHHDMHHHAAPPRPTGIHRWTGPGWLRILWVTPIFAAIGIGLPVLI
JGI20207J14881_107594523300001398Arctic Peat SoilMTDVAHAHDHHVAPPARTGLRRLTSPGWLRVLWVTPLFIGLGFALVVLIRWAAHWDPLWKGS
A10PFW1_1103113443300001538PermafrostVTELHEHHTAPARTGIHRLTGPGWLRVLWVTPIFFGLGVGLPVLIRWLAHWHPVWKGSVILTVE
C688J18823_1014948513300001686SoilMTTTEHHDMHHHAAPPRPTGIHRWTGPGWLRILWVTPIFAAIGIGLPVL
Ga0063454_10083539123300004081SoilMTDLAHAHHEHAPPAAPTGRQRWTGGGWLRVLWMTPIFFAIGIGLPVLIRWLAHWHPIWDTNVIITVELVTT
Ga0062594_10121800323300005093SoilMTTTEHHDTHHHAAPPRPTGIHRWTAPGWLRILWVMPIFIGIGIALPVLIRWLADWHPIWDGEVIITV
Ga0066684_1076357213300005179SoilVTTAHEEYAHHEHGARPRPTGWRRWTGPGWLRVLWVTPIFFGIGLALPVLIRWLVDWQPVWKGSVIVTVELVTTPLGFLAG
Ga0068868_10113383413300005338Miscanthus RhizosphereMTDVAHAHEHHTAPPPRTGIHRWTGPGWLRVLWVTPIFIGLGFAIPGLIRWLADWQPIWKGQVILTVELV
Ga0070668_10184486813300005347Switchgrass RhizosphereMTTTEHHDTHHHAAPPRPTGIHRWTAPGWLRILWVMPIFIGIGIALPVLIRWLADWHPIWDGEVIITVELVTAPLGFLVG
Ga0070671_10168081523300005355Switchgrass RhizosphereMAEAHDPHAHGSPPVTGFRRLMQPGWLRVLWVTPIGFGLGIGLPVLLRWAAGWHPLWDGAVLVTVELVTTPLFFLI
Ga0070714_10100214913300005435Agricultural SoilMTEHHEPTKPTGWHRLTAPGWLRVLWVTPIGFGLGIAIPVLIR
Ga0070663_10127685913300005455Corn RhizosphereMTDLHEHELHEHLPAAAPTGIHRLTAPGWLRVLWVMPIFFGIGLGL
Ga0070678_10023299513300005456Miscanthus RhizosphereVTAVTHAHDPHAPAAPPAGGWHRLTRPGWLRVLWVTPIFFGIGIALPVLIRWLVEWH
Ga0070707_10083159613300005468Corn, Switchgrass And Miscanthus RhizosphereVTELRDAHATHAPEGFRRLTAPGWLRVLWVTPLFMGIGFGLPVLIRWLAHWDPVWK
Ga0070734_1086562213300005533Surface SoilMTDVAHVHEHDHHAAAPAPTGWRRFTAPGWLRVLWVTPIGFGLGIGLPVLIRWLAHWDPLWKGSVLVTVELVTT
Ga0070704_10120968013300005549Corn, Switchgrass And Miscanthus RhizosphereVTDVAHAQVHDHHEAPPPRTGIHRWTGPGWLRVLWVTPIFIGIGIGLPCLIRWLADW
Ga0068856_10029592233300005614Corn RhizosphereMTDVAHAHEHHTAPPPRTGIHRWTGPGWLRVLWVTPIFIGLGFAIPGLIRWLADWQPIWKGQVILTV
Ga0070717_1122584113300006028Corn, Switchgrass And Miscanthus RhizosphereVTDVAHAHDHHAAPPAPTGYHRLTAPGWLRVLWVTPLFFGIGLGLPVLIRWLAHWDPVWK
Ga0070715_1029828813300006163Corn, Switchgrass And Miscanthus RhizosphereVTTAHEEHAQHEHVARPGPTGWHRWTGPGWLRVLWVTPLFFGIGIAIPVLIRWLVDWQPIWKGSVIVTI
Ga0070712_10064568423300006175Corn, Switchgrass And Miscanthus RhizosphereMTDVAHVHEHDVHAPPPAPTGWHRWTAPGWLRVLWVTPLFFAFGFALPVLLRWAAGWEPFAKSSVI
Ga0075522_1011329213300006638Arctic Peat SoilVTDLHEHHTATARTGIHRLTGPGWLRVLWVTPVFFGFGAGLPVLIRWLAHWNPVWKGSVI
Ga0079222_1011546933300006755Agricultural SoilVTDVAHAHDHHAAPPAPKGIHRWTAPGWLRVLWVTPIFIGIGIALPCLIRWLTDWHPIWKGSVILTVELVTAPLGF
Ga0079220_1168794013300006806Agricultural SoilVTDVAHAHDHHAAPPAPKGIHRWTAPGWLRVLWVTPIFIGIGIALPCLIRWLADWHPIWKGSVI
Ga0079220_1205289023300006806Agricultural SoilVTDVAHAHDHHEAPPAPTGLRRFTGPGWLRVLWVTPIFMGIGFGLPCLVRWLADWGPIWK
Ga0068865_10164989223300006881Miscanthus RhizosphereMTDVAHAHEHHVAPPPRTGIRRWTGPGWLRVLWVVPIFIGIGFAIPGLIRWLADWQPIWK
Ga0066710_10300010313300009012Grasslands SoilMTAVHHDAHAHDAPPRPEGFRRLTAPGWLRVLWVTPIFVGIGFGLPVLI
Ga0105245_1237662113300009098Miscanthus RhizosphereMTDVAHAHEHHTAPPPRTGIHRWTGPGWLRVLWVTPIFIGLGFAIPGLIRRLADWQPIWKGQVILTVQLVTAPLGFLVG
Ga0066709_10344209313300009137Grasslands SoilVTETLHDHELAPAPEGLRRLTAAGWLRVLWVTPLFMGIGFGLPVLVRWLAHWDPVWKGSVIVTVQLVT
Ga0105248_1117362223300009177Switchgrass RhizosphereMTDVAHAHEHHVAPPPRTGIRRWTGPGWLRVLWVVPIFIGIGFAIPGLIRWLADWQPIWKGQVILTVQLVTAPLGFLVGI
Ga0105238_1058732413300009551Corn RhizosphereMTDAAHAHAHHIAPAPPAGWHRLTAPGWLRVLWVTPIGFGIGLGLPVLLRWAAGWHPLWDGTV
Ga0126374_1086949423300009792Tropical Forest SoilVTAVAHAHDPHTHAAPPSGRHRWTRPGWLRVLWVTPIFIGIGIALPVLIRWLADWH
Ga0127452_113947313300010119Grasslands SoilMTDVAHAHAQHAAPAPPAGWHRLTAPGWLRVLWVTPLFMGIGFGLPVLVRWLAHWDPVWK
Ga0105239_1033504043300010375Corn RhizosphereMTDAAHAHAHHLAPAPPAGWHRLTAPGWLRVLWVTPIGFGLGLGLPVLLRWAAGWHPLWDGTVLVT
Ga0134126_1212105623300010396Terrestrial SoilMTDAAHAHAHHAPAPPTGWHRLTAPGWLRVLWVTPIGFGIGIGLPVLLRWAAGWHPLWDG
Ga0151490_111900613300011107SoilVTDVVATHAHAAPPAPTGFHRLTAPGWLRVLWVTPIFIGIGFAIPLLIRWLADWEPV
Ga0120162_102690443300011997PermafrostVTNLHEHELSEHHAARARTGIHRLTGPGWLRVLWVTPLFFGFGVGLPVLIRWLAHWNPVWKGSVI
Ga0120148_104448023300011999PermafrostMTDHHDDHAAPPPATGWHRLTAPGWLRVLWVTPIGFGLGIGLPVLIRWLAHWDPIWKDILGR*
Ga0120167_110153813300012001PermafrostMTDHHDDHAAPPPATGWHRLTAPGWLRVLWVTPLFFGIGIGLPVLIRWLSH
Ga0120159_101263943300012014PermafrostVTDVVSTHAHDTHAAPPPTGFRRLTAPGWLRVLWVTPIFIGIGFGLPVLIRWLPGWGAGWEGS
Ga0150985_10167983223300012212Avena Fatua RhizosphereMTDVAHAHEHHTAPPRTGIHRWTGPGWLRVLWVMPIFIGIGFAIPGLIRWFADWQPIWKG
Ga0150984_11643628713300012469Avena Fatua RhizosphereVTELAHAHEHHEGPPARTGIHRWTGPGWLRVLWVMPIFFGIGVALPVLIRWLAHWDPVWKGSVILTVELVTTPLGF
Ga0164300_1007310533300012951SoilMTDLHEHELHEHQPASAPTGIHRLTAPGWLRVLWVTPIFFGIGLGLPLLIRWL
Ga0164303_1072151013300012957SoilMTDVAHAHEHHTAPPPRTGIHRWTGPGWLRVLWVTPIFIGIGFAIPGLIRWLADWQPIWKGQVILTVELVTAPL
Ga0164299_1073524823300012958SoilMTDLHEHELHEHQPASAPTGIHRLTAPGWLRVLWVTPIFFGIGLGLPLLIRWLAQWDPVWKG
Ga0164299_1084341413300012958SoilMTDAAHAHAHHTAPAPPAGWHRLTAPGWLRVLWVTPIGFGIGIGLPVLLRWAAGWHPLWDGAVLVTV
Ga0164299_1164933713300012958SoilMTDVAHAHEHHTAPTPRTGIHRWTGPGWLRVLWVGPIFIGIGFAIPGRSRWLADWQPIWKGQVIL
Ga0126369_1039505413300012971Tropical Forest SoilVTTVHEEHAHEEHGTRPKPTGWHRWTAPGWLRVLWVTPIFFGIGIAIPVLIRWLVDWQPVWKGTVIITVELVTTPL
Ga0164309_1038713813300012984SoilMTDLHEHELHEHQPASAPTGIHRLTAPGWLRVLWVTPIFFGIGLGLPLLIRWLSHWDPVW
Ga0164308_1153555523300012985SoilMTDVAHAHEHHVAPPPRTGISRWTGPGWLRVLWVVPIFVGIGFAIPGLIRWLADWQPIWKGQVILTVQ
Ga0164307_1038678413300012987SoilVTDVAQAHAHDPHAAPPARTGIHRWTGPGWLRVLWVTPIFIGIGIGLPCLIRWLADWDPIWKGSVI
Ga0164306_1141061413300012988SoilMTDLHEHELHEHQPASAPTGIHRLTAPGWLRVLWVTPIFFGIGLGLPLLIRWLAHWDPVWKGSVILTVELVTV
Ga0157370_1100808123300013104Corn RhizosphereVTELHEHHAAATRPARTGIHRLTGAGWLRVLWVTPIFFGIGVGLPVLIRWLAHWN
Ga0157370_1207485713300013104Corn RhizosphereMTDLHEHELHEHLPAAAPTGIHRLTAPGWLRVLWVMPIFFGIGLGLPLLIRWLAHW
Ga0157369_1183521413300013105Corn RhizosphereMTDVAHDHAHHAPAPPTGWHRLTAPGWLRVLWVTPIGFGIGIGLPVLLRWAAGWHP
Ga0120172_109367113300013765PermafrostVTDVVSTHAHDTHAAPPPAGFRRLTAPGWLRVLWVTPIFIGIGFALPLLIRWLPGRGAGWEGAGF
Ga0120109_112157823300014052PermafrostVTDVVSTHAHDTHAAPPPTGFRRLTAPGWLRVLWVTPIFIGIGFALPLLIRWLPG
Ga0182006_128021213300015261RhizosphereMTDVAHAHGHHAAPPKPTGWHRLTAPGWLRVLWVTPIFFGIGIALPCLIRWLAHWDPVWKGSVLVSVE
Ga0132255_10191770913300015374Arabidopsis RhizosphereMTDVAHAHEQHTAPAPRTGIHRWTGPGWLRVLWVTPIFIGIGFAIPGLIRWLADWQPIWKGQVILTVELVTMPLGFLVG
Ga0182040_1139026013300016387SoilMTTATVHSVHHAPPPRTGLHRWTAPGWLRVLWVTPIFFGIGIALPVFFRWLADWQPIWKGTVIITVELVTVP
Ga0187780_1034829723300017973Tropical PeatlandMTDVVHAQDQHSAPPKPAGWHRLTAPGWLRVLWVTPIGFLLGIGLVVLVRWL
Ga0066662_1009388413300018468Grasslands SoilVTDVAHAHDHHVAPPAPSGWHRLTAPGWLRVLWVTPIFFGIGVGLPLLIRYLAHWQPYWKGS
Ga0197907_1040743713300020069Corn, Switchgrass And Miscanthus RhizosphereMTDVAHAHDHHAAPPAPTGLRRLTAPGWLRVLWVTPLFIGLGFALVVLIR
Ga0206352_1009182923300020078Corn, Switchgrass And Miscanthus RhizosphereMTDVAHTHDHHSAPAPPAGWHRLTAPGWLRVLWVTPIGFAFGLGITVLIRWAAHWDPIWK
Ga0206352_1087865823300020078Corn, Switchgrass And Miscanthus RhizosphereMTDLAHAHDHHAPAPPTGWRRLTAPGWLRVLWVTPIGFGLGIGLPVLLRWAAGWHPLWD
Ga0206354_1136758723300020081Corn, Switchgrass And Miscanthus RhizosphereMTDVAHAHDHHAAPPAPTGLRRLTAPGWLRVLWVTPLFIGLGFALVVLIRWASHWDPLWKGSVI
Ga0213880_1020606413300021953Exposed RockMTDVAHAHDHHVAPPAPTGWRRFTAPGWLRVLWVTPIGFGLGIGLPVLIRWLAHWDPLWKGSVLLSVELVTTPL
Ga0247668_111524713300024331SoilVTELHEHHAAATRPARTGIHRLTGAGWLRVLWVTPIFFGIGVGLPVLIRWLAHWNPVWKGSVIVTVELV
Ga0207685_1024217723300025905Corn, Switchgrass And Miscanthus RhizosphereVTTAHEEHAQHEHVARPGPTGWHRWTGPGWLRVLWVTPLFFGIGIAIPVLIRWLVDWQPIWKGSVIVTIELVTTPLGFLVG
Ga0207699_1140268023300025906Corn, Switchgrass And Miscanthus RhizosphereMTDAHDHAHHAPARPTGWRRLTAPGWLRVLWVTPIGFGIGVGLPVLLRWAAGYRT
Ga0207695_1120382713300025913Corn RhizosphereMTDVVHAHEHAHHAPAPPAGWHRLTAPGWLRVLWVTPIGFGIGIGLPVLLRWAAGWHPL
Ga0207663_1053051913300025916Corn, Switchgrass And Miscanthus RhizosphereVSTDVAHTTHEDHAAPTKPSGWHRLTAPGWLRVLWVTPIFFGLGIAIVCLLRWKAGWDPIWK
Ga0207649_1149715713300025920Corn RhizosphereMTEAAHVHAHHAAPAPPAGWRRLTAPGWLRVLWVTPIGFGIGIGLPVLLRWAAG
Ga0207652_1081604523300025921Corn RhizosphereMTDVAHAHHSAPASPTGWHRLTAPGWLRVLWVTPIGFGIGIGLPVLLRWAAGWHPLWDGT
Ga0207646_1038578223300025922Corn, Switchgrass And Miscanthus RhizosphereVTELRDAHATHAPEGFRRLTAPGWLRVLWVTPLFMGIGFGLPVLIRWLAHWDPVWKGS
Ga0207694_1140519113300025924Corn RhizosphereVTELHEHHAAATRPARTGIHRLTGAGWLRVLWVTPIFFGIGVGLPVLIRWLA
Ga0207700_1003108113300025928Corn, Switchgrass And Miscanthus RhizosphereVTDVAHTEPQHHEHHAAPSKPTGWHRLTAPGWLRVLWVTPIFFGIGIGIVCLL
Ga0207700_1165853523300025928Corn, Switchgrass And Miscanthus RhizosphereVTAAVHPHDPHAPAAPPSGGFHRLLKPGWLRVLWVTPLFVGIGIGLPVLI
Ga0207701_1123684813300025930Corn, Switchgrass And Miscanthus RhizosphereMTTTEHHDTHHHAAPPRPTGIHRWTAPGWLRILWVMPIFIGIGIALPVLIRWLADWHPIWDGEVIITVELVTAPLGFLVGL
Ga0207665_1053897613300025939Corn, Switchgrass And Miscanthus RhizosphereMTDVAHAHAHHSAPAPPAGWHRLTAPGWLRVLWVTPIGFGLGIGLPVLLRWAA
Ga0207665_1138357813300025939Corn, Switchgrass And Miscanthus RhizosphereVTAMAEAHDPHAHGSPPVTGFRRLMQPGWLRVLWVTPIFMGIGFGLVVGIRWLAGWQ
Ga0207661_1180235323300025944Corn RhizosphereMTDAAHAHAHHLAPAPPAGWHRLTAPGWLRVLWVTPIGFGIGLGLPVLLRWAAG
Ga0207667_1003198113300025949Corn RhizosphereMTEAAHVHAHHAAPAPPAGWRRLTAPGWLRVLWVTPIGFGIGIGLPVLLRWAAGWHP
Ga0207667_1147175923300025949Corn RhizosphereMTDVAHDHAHHAPAPPTGWHRLTAPGWLRVLWVTPIGFGIGIGLPVLLRWAAGWHPL
Ga0207668_1153357013300025972Switchgrass RhizosphereMTTTEHHDTHHHAAPPRPTGIHRWTAPGWLRILWVMPIFIGIGIALPVLIRWLADWHPIWDGEVIITVELVTAPLGFLVGLGGFD
Ga0207640_1207636123300025981Corn RhizosphereMTDLHEHELHEHLPAAAPTGIHRLTAPGWLRVLWVMPIFFGIGL
Ga0207683_1133632213300026121Miscanthus RhizosphereVTAVTHAHDPHAPAAPPAGGWHRLTRPGWLRVLWVTPIFFGIGIALPVLIRWLVEWHP
Ga0207698_1171329023300026142Corn RhizosphereMTDVAHAHEHQTAPPPRTGIRRWTGPGWLRVLWVTPIFIGIGIGLPCLIRWLADWQPIWKGSV
Ga0265322_1019847723300028654RhizosphereVTDVAHAHDPHAAPSAPTGWHRLTAPGWLRVLWVTPIFFGFGLGLPVLLRWAAGWDPVWKGSVLV
Ga0307292_1052957323300028811SoilMTDVAHAHEHHTAPPPRTGIHRWTGPGWLRVLWVTPIFIGIGFAIPGLIRWLADWQPIWKGQVN
Ga0307314_1004987223300028872SoilVTDLHEHELHEHHPASAPTGIHRLTAPGWLRVLWVTPIFFGIGLGLPLLIRWLAHWDPVWKGSVILTVEL
Ga0307286_1032915823300028876SoilMTDVAHAHEQHTAPPPRTGIRRWTGPGWLRVLWVVPIFIGIGFAIPGLIRWAA
Ga0102757_1120734523300030785SoilMTDVAHAHDHHAAPPAPTGWHRWTAPGWLRVLWVTPIGFGLGLGLPVLIRWLAHWDPLWK
Ga0307497_1015046113300031226SoilMADHHDHHEHAAPVPPTGWHRLTAPGWFRVLWVTPLFFGIGIALPVLIRWLAHWD
Ga0170824_10012115723300031231Forest SoilMTDVAHAHELHAPPPAPTGWHRWTAPGWLRVLWVTPLFIGLGFAIPLLVRWLAHWDPVWKGSVLVTIQLVTA
Ga0318534_1007444913300031544SoilMTTATVHSVHHAPPPRTGLHRWTAPGWLRVLWVTPIFFGIGIALPVFFRWLADWQPIWKGTVIITV
Ga0318573_1005644213300031564SoilMTTATVHSVHHAPPPRTGLHRWTAPGWLRVLWVTPIFFGIGIALPVFFRWLADWQPIW
Ga0306917_1152733523300031719SoilMTTATVHSVHHAPPPRTGLHRWTAPGWLRVLWVTPIFFGIGIALPVFFRWLADWQPI
Ga0307468_10074874623300031740Hardwood Forest SoilMTTTEHHDTHHHAAPPRPTGIHRWTAPGWLRILWVMPIFIGIGIALPVLIRWLADWHPIW
Ga0318547_1075224513300031781SoilMTTATVHSVHHAPPPRTGLHRWTAPGWLRVLWVTPIFFGIGIALPVFFRWLADWQPIWKGTVIITVE
Ga0306921_1004660013300031912SoilMTTATVHSVHHAPPPRTGLHRWTAPGWLRVLWVTPIFFGIGIALPVFFRWLADWQPIWKGTVIITVELVTVPL
Ga0308175_10321291413300031938SoilMTDVAHAHAHHAAPAPPTGWHRLTAPGWLRVLWVTPIGFGIGIGLPVLIRW
Ga0308176_1120793713300031996SoilMTDVVHTHADHAAPVAPTGWHRLTYPGWLRVLWVTPIFFGIGLGLPLLIRHLAHWDP
Ga0335083_1076680523300032954SoilMTDIVHEHAHDEHAAPPGPKGWHRLTAPGWLRVLWVTPIFFGIGAAIVLLLRWGADWQPLWKGTVIVTVELVT
Ga0310914_1041200623300033289SoilMTTATVHSVHHAPPPRTGLHRWTAPGWLRVLWVTPIFFGIGIALPVFFRWLADWQPIWKGTVIITVELVT
Ga0372943_0723131_2_2113300034268SoilMTDVAHAHDHHVAPPAPAGFRRLSSPGWLRVLWVTPIFIAFGFGLPLLIRWLAGWDPVWKGSVLVTIQLV
Ga0372946_0508143_2_1603300034384SoilVTDVHDHTTTTPPRGGLHRLTAPGWLRVLWVTPIFFGIGVGLPVLIRWLAHWD
Ga0372946_0523980_417_5753300034384SoilVTELHEHHAASARTGLGRLTAPGWLRVLWVTPIFFGIGLGLPLLIRWLAHWDP

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Bioinformatics & Integrated Biology Lab
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Biomedical Sciences Research Center "Alexander Fleming"
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