NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F090974

Metagenome Family F090974

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090974
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 40 residues
Representative Sequence MFRIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNFE
Number of Associated Samples 10
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 1.85 %
% of genes from short scaffolds (< 2000 bps) 1.85 %
Associated GOLD sequencing projects 6
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut
(100.000 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 62.50%    Coil/Unstructured: 37.50%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF00008EGF 1.87
PF00307CH 0.93


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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001544|JGI20163J15578_10423394Not Available844Open in IMG/M
3300027984|Ga0209629_10536000Not Available1004Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut100.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001544Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1Host-AssociatedOpen in IMG/M
3300002125Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4Host-AssociatedOpen in IMG/M
3300002127Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3Host-AssociatedOpen in IMG/M
3300002175Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5Host-AssociatedOpen in IMG/M
3300002185Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1Host-AssociatedOpen in IMG/M
3300027558Cubitermes ugandensis crop segment gut microbial communities from Kakamega Forest, Kenya - Cu122C (SPAdes)Host-AssociatedOpen in IMG/M
3300027891Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4 (SPAdes)Host-AssociatedOpen in IMG/M
3300027904Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027960Cubitermes ugandensis midgut segment microbial communities from Kakamega Forest, Kenya - Cu122M (SPAdes)Host-AssociatedOpen in IMG/M
3300027984Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI20163J15578_1003844923300001544Termite GutMFWIVCDPSSGSIELYLTEISSGSLMFVVCLVGVWQRNFEL*
JGI20163J15578_1005171783300001544Termite GutMFRVVFDPSSGSIELYLTEIRRGSLMFVLCLVGVWQR
JGI20163J15578_1007887833300001544Termite GutMFRIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVWQL
JGI20163J15578_1011324833300001544Termite GutMFRIVCDATSESIELYLTEIRSGSLMFVVCLVGVWQRNFEP
JGI20163J15578_1022040513300001544Termite GutMFWIICDPSSESVELYLTEIRSGSLMFVVCLVGVWQR
JGI20163J15578_1023840113300001544Termite GutMFWIVCDPSSGSIKLYLTEIIRSGSLMFVVCLVGVW
JGI20163J15578_1026055723300001544Termite GutMFQIICDPSSGSTELYLTEIRSGSLMFVVCLVSVWQRNFLTSGVC
JGI20163J15578_1027139033300001544Termite GutMFRIVSDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRVYGT
JGI20163J15578_1037420713300001544Termite GutMFRVVCDPSSGSIELYLTEIRSGSLMFVVCLIGVWQ
JGI20163J15578_1042339413300001544Termite GutMFRIVFDPSSGSIELYLTEIRSGSLMFDVCFVGVWQR
JGI20163J15578_1048999733300001544Termite GutMFRIICDPSSGSRELYLTEIIRSGSLMFVVCLVGVWQRNFEP
JGI20163J15578_1053882513300001544Termite GutMFRIVCDPSSGNIELYLTEIRSGSLMFVVCLVGVWQRN
JGI20163J15578_1068205013300001544Termite GutMFRIVCDPSSGCIELYLTEIRSGSLMFVVCLVGVWQRNFEPVV
JGI20163J15578_1068716533300001544Termite GutMFRIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNFEP
JGI20163J15578_1077941123300001544Termite GutMFRIVCDPSSRSTELYLTEIIRSGSLMFVVCLVGVWQRNFE
JGI20165J26630_1022994613300002125Termite GutMFWIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNFEPVVC
JGI20165J26630_1037083313300002125Termite GutMFRIIFDPSSGSIELHLTEIRSGSLMFVVCLVGVWQRNFEPVV
JGI20165J26630_1056985613300002125Termite GutMFRIVCDPSSGSIELYLTEIRSGSXMFVVCLVGVWQRNFEP
JGI20165J26630_1066503323300002125Termite GutMFRIVCDPSSGSIELYLTEIXRSGSLMFVVCLVGVWQRNFEPV
JGI20165J26630_1070679813300002125Termite GutMFRIVCDPSSRSTELYLTEIIRSGSLMFVVCLVGVWQRN
JGI20165J26630_1075072613300002125Termite GutMFRIVCDPS*GSIELYLTVIIRSGSLMFVVCLVSV
JGI20164J26629_1009314333300002127Termite GutMFRIVCDQSSGSIELYLTEIRSGSLTFFVCLVGVWQ
JGI20164J26629_1037108723300002127Termite GutMFWIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVWQR
JGI20164J26629_1053586333300002127Termite GutMFRIVCDPSSRSTELYLTEIIRSGSLMFVVCLVGVWQRNFEP
JGI20164J26629_1055492613300002127Termite GutMFRIVCDPSPGSIELYLTEIRSGSLMFVVCLVGVWQRNFEPVV
JGI20166J26741_1145686533300002175Termite GutMFRIVCDPSSESIELYLTEIIRSGSLMFVVCLVGVWQRNFEPVV
JGI20166J26741_1149900513300002175Termite GutMFWIICDPSSGSIELYLTEIRSGSLMFVVCLVGVWQR
JGI20166J26741_1152293513300002175Termite GutMFRIVCNPSSGSIELYLTEIRSGSLMFVVCLVGVWQHNFEPVVCV
JGI20166J26741_1160959023300002175Termite GutMFRIVCDPSSGSIELYLTEIRSGPLMFVVCLVGVWQRNF*
JGI20166J26741_1161600773300002175Termite GutMFRIVCDPSSGSIELYLTEIRSVSLMFVVCLVGVWQRNFEL*
JGI20166J26741_1165938223300002175Termite GutMFRIVCDPSSGNIELYLTEIRSGSLMFVVCLVGVWQRNFEPVVCV
JGI20166J26741_1172468333300002175Termite GutMFRIV*DPSSGSIELYLTEIRSGSLMFVVCLVGV*QRNF
JGI20166J26741_1177601933300002175Termite GutMFWIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVW
JGI20166J26741_1189956313300002175Termite GutMFRIVCDPSSGSVELYLTEIRSGSLMFVVCLVGVWQRNFEPVVCV
JGI20166J26741_1192885243300002175Termite GutMFGVVCDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNFE
JGI20166J26741_1200563623300002175Termite GutMFRIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNF*
JGI20166J26741_1202709813300002175Termite GutMFRIIFDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNF
JGI20166J26741_1203052113300002175Termite GutMFRVVCDPSSGSTELYLTEIIRSGSLMFVVCLVGVW
JGI20166J26741_1226770813300002175Termite GutPSSGSVKLYLTEIRSGSLMFVVCLVGVWQRNFEL*
JGI20166J26741_1226770823300002175Termite GutCDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNCEL*
JGI20163J26743_1049224613300002185Termite GutMFWIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVWQCNFEPVV
JGI20163J26743_1054223133300002185Termite GutMFRVVCDPSSGSIELYLTEIILSGSLMFVLCLVGVWQRNFE
JGI20163J26743_1060470213300002185Termite GutMFRIVCDPSSGCIKLYLTEIRCGLLMFVVSLIAVWQRNF*TSGV
JGI20163J26743_1061941813300002185Termite GutMFRIVCNPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNFE
JGI20163J26743_1065094023300002185Termite GutMFRIVCDPSSGSVELYLTEIRSGSLMFVACLVGVWQRV
JGI20163J26743_1083767813300002185Termite GutMFRIVWDPSSGNIELYLTEIRSGSLMFVVCLVGVWHR
JGI20163J26743_1091218913300002185Termite GutMFRIIFDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNFEPVVCV
JGI20163J26743_1101220523300002185Termite GutMFQIVCNPSSGSIELYLTEIRSGSLMFVVCLVSVWQHNFEPV
JGI20163J26743_1119233513300002185Termite GutMFRIVSDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRVYGTT
JGI20163J26743_1121921013300002185Termite GutMFRIVCDPSSGSIKLYLTEIIRGGSLMFVVCLVGVWQRNF
JGI20163J26743_1128184823300002185Termite GutMFRIVYDPSSGTIELYLTEIRSGSLMFVVCLVGVWQRNFEL*
JGI20163J26743_1132590813300002185Termite GutMFWIICDPSSESVELYLTEIRSGSLMFVVCLVGVWQRNFEPVV
Ga0209531_1003441213300027558Termite GutMFRIVSDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRN
Ga0209531_1005949713300027558Termite GutMFRIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVRQRNFEPG
Ga0209531_1006172913300027558Termite GutMFRIVCDPSSGCTELHLTEIIRSGSLMFVVCLVGVWQRNF
Ga0209531_1016489423300027558Termite GutMFRIVCDPSSGSIELYLTEIRSGSLTFVVCLVGDWERGVCVCM
Ga0209531_1026742313300027558Termite GutMFRIVRDPSSGSIELYLTEIRSGSLMSVVCLVGVWQRNFVPVVYM
Ga0209531_1028829013300027558Termite GutMFRIVCDTSSGSIELYLTEIIRGGSLMFVVCLVGVWQRNFEP
Ga0209628_1002628513300027891Termite GutMFRIVCDPSSGSIELYLTEIRSGSLTFVVCLVDAWQHNFEPVV
Ga0209628_1004255813300027891Termite GutMFRIVCDPSSGSIELYLTEIRSVSLMFVVCLVGVWQRNFEL
Ga0209628_1007753813300027891Termite GutMFQIVCNPSSGSIELYLTEIRSGSLMFVVCLVSVWQHNFEPVVCVCVC
Ga0209628_1011896113300027891Termite GutMFRIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNFEPVV
Ga0209628_1012334823300027891Termite GutMFQIVCDPSSRSTELYLTEIRSGSLMFVVCLVGVWQRNFEL
Ga0209628_1015074513300027891Termite GutMFRIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVWQ
Ga0209628_1018500913300027891Termite GutMFRIVCDPSSGSIELYLTEIRSGSLMFVVCLVSVW
Ga0209628_1026845513300027891Termite GutMFRIVLDPSSGSIELYLTEIRSGSLMFVVCLASVW
Ga0209628_1028317813300027891Termite GutMFRIVCDPSSGSIELYLTEIIRSGSLMFVVCLVGVW
Ga0209628_1029349413300027891Termite GutMFRIVCDPSSGSIELYLTEIIRGGSLMFVVCLVGVWQRN
Ga0209628_1039338513300027891Termite GutMLRIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRVFE
Ga0209628_1039467213300027891Termite GutMFRIVCNPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNFEP
Ga0209628_1043135123300027891Termite GutMFRIVCDPSSESIELYLTEIRSGSLMFVVCLVGVWQRNFEPVV
Ga0209628_1044865113300027891Termite GutMFRIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNFEPKLR
Ga0209628_1046947313300027891Termite GutMFRIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNLEPV
Ga0209628_1050633113300027891Termite GutMFRIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRN
Ga0209628_1052588413300027891Termite GutMFRIVCDATSESIELYLTEIRSGSLMFVVCLVGVWQRNFEPVVCVC
Ga0209628_1062113213300027891Termite GutMFRIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVRQRNFEPGSPSYRKHTP
Ga0209628_1065816813300027891Termite GutMFRIICNPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNFEPV
Ga0209628_1076150823300027891Termite GutDKFRIVCDPSSGSIKLYLTEIRSGSLMFVVCLVGVWQRNFEL
Ga0209628_1100316713300027891Termite GutMKNHSNMFRIMCDTSSGSIELYLTEIRGGPLMFVVCLVGVWQRNFEPV
Ga0209628_1109377413300027891Termite GutMFRIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNFEPV
Ga0209628_1132491623300027891Termite GutMFRIVCDPSSGSIELYLTEIRSGSLTFVVCLVGVWQRNFEPS
Ga0209628_1151993013300027891Termite GutMKNHSSMFRIVCDTSSGSIELYLTEIRGGPLMFVVCLVGVWQRNFEPV
Ga0209737_1018249023300027904Termite GutMFRIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNFE
Ga0209737_1019444113300027904Termite GutMFRIVCDPSSGCTELHLTEIIRSGSLMFVVCLVGVWQ
Ga0209737_1023050413300027904Termite GutMFRIIFDPSSGSIELHLTEIRSGSLMFVVCLVGVWQRNF
Ga0209737_1027680923300027904Termite GutMFRIVCDPSSGSIELYLTEIRSGSLTFVVCLVDAWQHNFEPV
Ga0209737_1032763523300027904Termite GutMFRIICDPSSGSRELYLTEIIRSGSLMFVVCLVGVWQR
Ga0209737_1039673813300027904Termite GutMFRIVCDPSSGSIELYLTEIRSGSLTFVVCLVAVWQRNFEPVVCV
Ga0209737_1041676423300027904Termite GutMFRIVCDPSSRSTELYLTQIRSGSQMFVVCLIGVW
Ga0209737_1042424713300027904Termite GutMFRIVFDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRN
Ga0209737_1049475013300027904Termite GutMFRIVCDPSSGSIELYLTEIRSGSLMFVVCLVFGSVTLDQ
Ga0209737_1119180413300027904Termite GutMFRILCDPSSGSRELYLTEIIRSGSQIFVLCLVGVWQR
Ga0209737_1157230213300027904Termite GutMFRIVCDPSSGCIELYLTEIRSGSLMFVVCLIGVWQ
Ga0209737_1172405413300027904Termite GutMFRIIFDPSSGIVELFLTEIRSGSLMFVVCLVGVWQRNF
Ga0209627_106614013300027960Termite GutMFRIVCDPSSGSIELYLTEIRSGSLTFVVCLVDAWQHNFEPVVCVHGTTG
Ga0209627_124907513300027960Termite GutMFRIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNFEQVVC
Ga0209629_1013178223300027984Termite GutMFRIVCDPSSGSIELYLTEIIRSGSLMFVVCLVGVWQGNF
Ga0209629_1013629813300027984Termite GutMFRIVSDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNFEPVV
Ga0209629_1014950213300027984Termite GutMFRIVCDATSESIELYLTEIRSGSLMFVVCLVGVWQRNFEQVVCVCT
Ga0209629_1016084033300027984Termite GutMFRIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNF
Ga0209629_1045399623300027984Termite GutMFRIICDPSSGSRELYLTEIIRSGSLMFVVCLVGVWQRNFEPVVS
Ga0209629_1052957613300027984Termite GutMFRIVCDPSSGSIELYLTEIRSGSLMFVVCLIGVWQR
Ga0209629_1053600013300027984Termite GutMFRIVCDPSSGSIELYLTEIRSGSLMFVVCLVGVW
Ga0209629_1054327213300027984Termite GutMFRIVCDPSSGSIELYLTEIRSGSLMFVVCLVVVWH
Ga0209629_1060595013300027984Termite GutMFRVVCDPSSGSIELYLTEIRSGSLMFVVCLIGVW
Ga0209629_1063549213300027984Termite GutMFRIACDPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNLEPVV
Ga0209629_1071639013300027984Termite GutMFRIICNPSSGSIELYLTEIRSGSLMFVVCLVGVWQRNF
Ga0209629_1099769713300027984Termite GutMFRIVYDPSSGSIELYLTEIRSGSLMFVVCLIGVWQRNF

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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