Metagenome Family F091006

Basic Information
Family ID	F091006
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	38 residues
Representative Sequence	MGLRFEEINPPKKEECPMPPAKKTTKKAKSSKVEESTNS
Number of Associated Samples	75
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.78 %
% of genes near scaffold ends (potentially truncated)	15.74 %
% of genes from short scaffolds (< 2000 bps)	71.30 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Most Common Taxonomy
Group	Unclassified (83.333 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (39.815 % of family members)
Environment Ontology (ENVO)	Unclassified (82.407 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.222 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.97% β-sheet: 0.00% Coil/Unstructured: 94.03%
Feature Viewer

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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF13264	DUF4055	50.00
PF01391	Collagen	4.63
PF03237	Terminase_6N	1.85
PF13481	AAA_25	0.93
PF16778	Phage_tail_APC	0.93
PF13550	Phage-tail_3	0.93
PF13884	Peptidase_S74	0.93
PF12705	PDDEXK_1	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.33 %
All Organisms	root	All Organisms	16.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.33 %
cellular organisms	root	All Organisms → cellular organisms	12.04 %
Viruses	superkingdom	All Organisms → Viruses	4.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.33 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	10.19 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	3.70 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.33 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	10.19 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	3.70 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.33 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	10.19 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	3.70 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.33 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	10.19 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.70 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.33 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	10.19 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	1.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.85 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.33 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	10.19 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.85 %
uncultured phage MedDCM-OCT-S04-C231	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S04-C231	0.93 %
uncultured phage MedDCM-OCT-S05-C353	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S05-C353	0.93 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10054953	Not Available	1713	Open in IMG/M
3300000116\|DelMOSpr2010_c10071462	Not Available	1410	Open in IMG/M
3300000116\|DelMOSpr2010_c10141431	Not Available	837	Open in IMG/M
3300000117\|DelMOWin2010_c10013087	Not Available	4606	Open in IMG/M
3300000401\|BB_Man_B_Liq_inBBDRAFT_1015710	Not Available	979	Open in IMG/M
3300000949\|BBAY94_10058368	Not Available	1070	Open in IMG/M
3300001450\|JGI24006J15134_10019632	Not Available	3132	Open in IMG/M
3300001450\|JGI24006J15134_10062146	Not Available	1471	Open in IMG/M
3300001450\|JGI24006J15134_10076976	Not Available	1260	Open in IMG/M
3300001450\|JGI24006J15134_10085675	Not Available	1166	Open in IMG/M
3300001450\|JGI24006J15134_10228000	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S04-C231	549	Open in IMG/M
3300001472\|JGI24004J15324_10154092	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	528	Open in IMG/M
3300001951\|GOS2249_1047989	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300001963\|GOS2229_1013099	Not Available	1854	Open in IMG/M
3300001965\|GOS2243_1024801	Not Available	1588	Open in IMG/M
3300004097\|Ga0055584_100013420	Not Available	8041	Open in IMG/M
3300005239\|Ga0073579_1576107	Not Available	694	Open in IMG/M
3300005239\|Ga0073579_1672412	Not Available	1586	Open in IMG/M
3300005971\|Ga0066370_10025172	Not Available	1744	Open in IMG/M
3300006026\|Ga0075478_10000034	Not Available	39741	Open in IMG/M
3300006735\|Ga0098038_1001525	Not Available	9991	Open in IMG/M
3300006735\|Ga0098038_1001698	Not Available	9503	Open in IMG/M
3300006735\|Ga0098038_1008989	Not Available	3958	Open in IMG/M
3300006735\|Ga0098038_1025620	Not Available	2224	Open in IMG/M
3300006735\|Ga0098038_1070082	Not Available	1241	Open in IMG/M
3300006735\|Ga0098038_1078659	Not Available	1158	Open in IMG/M
3300006735\|Ga0098038_1104607	Not Available	973	Open in IMG/M
3300006735\|Ga0098038_1110476	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	941	Open in IMG/M
3300006735\|Ga0098038_1129202	Not Available	854	Open in IMG/M
3300006735\|Ga0098038_1174154	Not Available	707	Open in IMG/M
3300006735\|Ga0098038_1198774	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	649	Open in IMG/M
3300006735\|Ga0098038_1283291	Not Available	517	Open in IMG/M
3300006737\|Ga0098037_1173589	Not Available	715	Open in IMG/M
3300006749\|Ga0098042_1042080	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300006749\|Ga0098042_1079036	Not Available	853	Open in IMG/M
3300006749\|Ga0098042_1094329	Not Available	763	Open in IMG/M
3300006749\|Ga0098042_1126365	Not Available	636	Open in IMG/M
3300006752\|Ga0098048_1039472	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1510	Open in IMG/M
3300006920\|Ga0070748_1141586	Not Available	898	Open in IMG/M
3300006929\|Ga0098036_1020217	Not Available	2113	Open in IMG/M
3300007276\|Ga0070747_1288580	Not Available	565	Open in IMG/M
3300007345\|Ga0070752_1364180	Not Available	540	Open in IMG/M
3300007555\|Ga0102817_1066867	Not Available	785	Open in IMG/M
3300007647\|Ga0102855_1199314	Not Available	534	Open in IMG/M
3300007862\|Ga0105737_1055576	Not Available	964	Open in IMG/M
3300009550\|Ga0115013_11353810	Not Available	526	Open in IMG/M
3300010148\|Ga0098043_1089092	Not Available	909	Open in IMG/M
3300010148\|Ga0098043_1122192	Not Available	749	Open in IMG/M
3300010389\|Ga0136549_10063378	Not Available	1850	Open in IMG/M
3300012920\|Ga0160423_10182856	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1463	Open in IMG/M
3300012936\|Ga0163109_10125201	Not Available	1885	Open in IMG/M
3300012936\|Ga0163109_10753135	Not Available	712	Open in IMG/M
3300017708\|Ga0181369_1072338	Not Available	744	Open in IMG/M
3300017708\|Ga0181369_1087431	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	658	Open in IMG/M
3300017708\|Ga0181369_1123068	Not Available	525	Open in IMG/M
3300017709\|Ga0181387_1069892	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	706	Open in IMG/M
3300017709\|Ga0181387_1084779	Not Available	643	Open in IMG/M
3300017717\|Ga0181404_1009285	Not Available	2613	Open in IMG/M
3300017721\|Ga0181373_1068157	Not Available	636	Open in IMG/M
3300017727\|Ga0181401_1001843	Not Available	8066	Open in IMG/M
3300017728\|Ga0181419_1088113	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	772	Open in IMG/M
3300017733\|Ga0181426_1006198	Not Available	2344	Open in IMG/M
3300017735\|Ga0181431_1051258	Not Available	934	Open in IMG/M
3300017742\|Ga0181399_1141915	Not Available	580	Open in IMG/M
3300017746\|Ga0181389_1184848	Not Available	543	Open in IMG/M
3300017752\|Ga0181400_1201953	Not Available	548	Open in IMG/M
3300017757\|Ga0181420_1008817	All Organisms → Viruses	3463	Open in IMG/M
3300017760\|Ga0181408_1020537	Not Available	1825	Open in IMG/M
3300017765\|Ga0181413_1047335	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1336	Open in IMG/M
3300017767\|Ga0181406_1109263	Not Available	835	Open in IMG/M
3300017767\|Ga0181406_1159725	Not Available	675	Open in IMG/M
3300017770\|Ga0187217_1202063	Not Available	657	Open in IMG/M
3300017781\|Ga0181423_1298338	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	594	Open in IMG/M
3300017786\|Ga0181424_10000075	Not Available	39006	Open in IMG/M
3300017786\|Ga0181424_10075206	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S05-C353	1459	Open in IMG/M
3300017951\|Ga0181577_10264207	Not Available	1128	Open in IMG/M
3300018420\|Ga0181563_10003897	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	14065	Open in IMG/M
3300020258\|Ga0211529_1012100	Not Available	1437	Open in IMG/M
3300020360\|Ga0211712_10099061	Not Available	718	Open in IMG/M
3300020378\|Ga0211527_10014432	Not Available	2851	Open in IMG/M
3300020385\|Ga0211677_10015278	Not Available	4001	Open in IMG/M
3300020388\|Ga0211678_10359383	Not Available	584	Open in IMG/M
3300020431\|Ga0211554_10003157	Not Available	11233	Open in IMG/M
3300020438\|Ga0211576_10004490	Not Available	9562	Open in IMG/M
3300020451\|Ga0211473_10264728	Not Available	884	Open in IMG/M
3300021356\|Ga0213858_10002888	Not Available	8139	Open in IMG/M
3300021356\|Ga0213858_10205868	Not Available	954	Open in IMG/M
3300021364\|Ga0213859_10098295	Not Available	1388	Open in IMG/M
3300021373\|Ga0213865_10180046	Not Available	1061	Open in IMG/M
3300021958\|Ga0222718_10001775	Not Available	20088	Open in IMG/M
3300022066\|Ga0224902_108952	Not Available	528	Open in IMG/M
3300022067\|Ga0196895_1000396	Not Available	4601	Open in IMG/M
3300022925\|Ga0255773_10346084	Not Available	586	Open in IMG/M
3300024346\|Ga0244775_10648875	Not Available	854	Open in IMG/M
3300025086\|Ga0208157_1001079	Not Available	13013	Open in IMG/M
3300025086\|Ga0208157_1001497	Not Available	10501	Open in IMG/M
3300025086\|Ga0208157_1061476	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	979	Open in IMG/M
3300025101\|Ga0208159_1041648	Not Available	989	Open in IMG/M
3300025102\|Ga0208666_1000122	Not Available	35247	Open in IMG/M
3300025102\|Ga0208666_1002536	Not Available	7568	Open in IMG/M
3300025120\|Ga0209535_1032375	Not Available	2447	Open in IMG/M
3300025120\|Ga0209535_1106412	Not Available	990	Open in IMG/M
3300025132\|Ga0209232_1154151	Not Available	731	Open in IMG/M
3300025168\|Ga0209337_1002185	Not Available	14367	Open in IMG/M
3300025887\|Ga0208544_10013189	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	4648	Open in IMG/M
3300028197\|Ga0257110_1020477	Not Available	2945	Open in IMG/M
3300029319\|Ga0183748_1000188	Not Available	39694	Open in IMG/M
3300033742\|Ga0314858_036542	Not Available	1155	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.07%
Algae	Host-Associated → Algae	0.93%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	97.22%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.93%
Sediment	Environmental → Aquatic → Sediment	0.93%
Green Algae	Host-Associated → Algae → Green Algae	0.93%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	45.37%
Strait	Environmental → Aquatic → Marine → Strait	18.52%
Coastal	Environmental → Aquatic → Marine → Coastal	11.11%
Unclassified	Environmental → Aquatic → Marine → Unclassified	10.19%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	7.41%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.63%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	42.59%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	18.52%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	11.11%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	10.19%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.63%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	2.78%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.78%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	2.78%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.85%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	39.81%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	18.52%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	8.33%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	5.56%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	3.70%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	3.70%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	2.78%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	2.78%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	2.78%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	2.78%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.85%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.93%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	0.93%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.93%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.93%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.93%
Bioluminescent Bay	Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified → Unclassified → Bioluminescent Bay	0.93%
Marine Methane Seep Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment	0.93%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300000401	Marine microbial community from La Parguera, Puerto Rico - BB Mangrove B Liquid	Environmental	Open in IMG/M
3300000949	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94	Host-Associated	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300001951	Marine microbial communities from North Seamore Island, Equador - GS034	Environmental	Open in IMG/M
3300001963	Marine microbial communities from Nags Head, North Carolina, USA - GS013	Environmental	Open in IMG/M
3300001965	Marine microbial communities from Coastal Floreana, Equador - GS028	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300005971	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_SurfaceA_ad_5m_LV_A	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007555	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555	Environmental	Open in IMG/M
3300007647	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02	Environmental	Open in IMG/M
3300007862	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373A_0.2um	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300010389	Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsf	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017709	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017721	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaG	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017728	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24	Environmental	Open in IMG/M
3300017733	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23	Environmental	Open in IMG/M
3300017735	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21	Environmental	Open in IMG/M
3300017742	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21	Environmental	Open in IMG/M
3300017746	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29	Environmental	Open in IMG/M
3300017752	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017770	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020258	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556061-ERR598949)	Environmental	Open in IMG/M
3300020360	Marine microbial communities from Tara Oceans - TARA_B100000459 (ERX555918-ERR599165)	Environmental	Open in IMG/M
3300020378	Marine microbial communities from Tara Oceans - TARA_B100000066 (ERX556006-ERR599102)	Environmental	Open in IMG/M
3300020385	Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)	Environmental	Open in IMG/M
3300020388	Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)	Environmental	Open in IMG/M
3300020431	Marine microbial communities from Tara Oceans - TARA_B100001142 (ERX556101-ERR598983)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020451	Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021373	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300022066	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28 (v2)	Environmental	Open in IMG/M
3300022067	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v3)	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025102	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025887	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300028197	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10m	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300033742	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawater	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_100549532	3300000116	Marine	MAGLRFEEINPPKKEECPMPPAKKVTKKAKSSKVEESTNS*
DelMOSpr2010_100714622	3300000116	Marine	MGLRFEEINPPKKEECPMPPAKKTTKKAKSSKVEESTNS*
DelMOSpr2010_101414312	3300000116	Marine	MAGLRFEEINPPKKEESPTPSAKKATRKAKSSKVEESTNS*
DelMOWin2010_100130876	3300000117	Marine	MAGMRFEEINPPKKEESSPAKKTSKKEKATKVEESTNS*
BB_Man_B_Liq_inBBDRAFT_10157102	3300000401	Bioluminescent Bay	MGLRFEEINPPKKEEKPAAKKPTSRKAKASKVEE*
BBAY94_100583682	3300000949	Macroalgal Surface	MGLRFEEINPPKKEEKPATAKKTSTKSTKSSKVEKSTDS*
JGI24006J15134_100196323	3300001450	Marine	MGLRFEEINPPKKEGSSASAEKKETKKAKSSKVEE*
JGI24006J15134_100621462	3300001450	Marine	MAEMRFEEINPPKKEESSSAKKTSKKEKATKVEESTNS*
JGI24006J15134_100769762	3300001450	Marine	MGLRFEEINPPKKEESSSSAAKKETKKAKSSKVEE*
JGI24006J15134_100856752	3300001450	Marine	MAGLRFEEINPPKKEECPMPPAKKETKKAKSSKVEESTNS*
JGI24006J15134_102280002	3300001450	Marine	MAGLRFEDINPPKKEECPMPPAKKVTKKAKSSKVEESTNS*
JGI24004J15324_101540921	3300001472	Marine	MGLRFEEINPPKKEGSSASTAKKETKKAKSSKVEE*
GOS2249_10479892	3300001951	Marine	MGLRFEEINPPKKEEKPAAKKPAAKKAKDSKVEE*
GOS2229_10130992	3300001963	Marine	MAGLRFEEINPPKKEESPTRSAKKATRKAKSSKVEESTNS*
GOS2243_10248013	3300001965	Marine	MGMRFEEINPPKKGECPMPEPKKTTKQAKSSKVEKSTNS*
Ga0055584_1000134207	3300004097	Pelagic Marine	MAGLRFEDINPPKKEEGPTPPVKKVTKKAKSSKVEESTNS*
Ga0073579_15761072	3300005239	Marine	MAGLRFEELNPPKKEEPVAPSPKKTTKRAKSSKVEESTNS*
Ga0073579_16724122	3300005239	Marine	MAGLRFEEINPPKKEESPASPAKKTTKKAKSSKVEESTNS*
Ga0066370_100251722	3300005971	Marine	MGLRFEEINPPKKEEKPAAKKPAAKKAKASKVEE*
Ga0075478_100000349	3300006026	Aqueous	MGLRFEEINPPKKEEAPAKKPAARKTKSTKVEESTDSN*
Ga0098038_100152522	3300006735	Marine	MGMRFEEINPPKKEECPMPEPKKTTKQAKSSKVEKSTNS*
Ga0098038_100169822	3300006735	Marine	MGMRFEEINPPKKEECPMPEPKKATKKAKSSKVDESTKA*
Ga0098038_10089892	3300006735	Marine	MGLRFEEINPPKKEECPMPATKKETKKAKSSKVEE*
Ga0098038_10256202	3300006735	Marine	MAGMRFEEINPPKKEECSLPAKKTSKKEKATKVEESTNS*
Ga0098038_10700822	3300006735	Marine	MGMRFEELNPPKKEQCPMPEPKKTTKKAKSSKVEESTNS*
Ga0098038_10786592	3300006735	Marine	MGLRFEEINPPKKEECPMPAAKKETKKAKSSKVEE*
Ga0098038_11046072	3300006735	Marine	MGLRFEEINPPKKEGSSAPAAKKETKKAKSSKVEE*
Ga0098038_11104762	3300006735	Marine	MGLRFEEINPPKKEGSSTPAAKKETKKAKSSKVEE*
Ga0098038_11292022	3300006735	Marine	MGMRFEELNPPKSQECPMPEPKKTTKKAKSSKVDESTKD*
Ga0098038_11741542	3300006735	Marine	MGMRFEEINPPKKDECPMPEPKKTTKQAKSSKVEKSTNS*
Ga0098038_11987741	3300006735	Marine	MGLRFEEINPPKKEGSSAPAAKKETKKAKASKVEE*
Ga0098038_12832912	3300006735	Marine	MGMRFEEINPPKSQECPMPEPKKTTKKAKSSKVDESTKD*
Ga0098037_11735892	3300006737	Marine	MGMRFEEINPPKKDECPMPEPKKTTKQAKSSKVEKSTKS*
Ga0098042_10420802	3300006749	Marine	MGMRFEEINPPKNQECPMPEPKKAAKKAKSSKVDESTKD*
Ga0098042_10790361	3300006749	Marine	MGMRFEEINPPKKEECPMPEPKKTTKQAKSSKVEKSTKS*
Ga0098042_10943292	3300006749	Marine	MGMRFEEINPPKKGECPMPEPKKTTKQAKSSKVEKSTDS*
Ga0098042_11263651	3300006749	Marine	MGMRFEEINPPKKDECPMPEPKKTTKKAKSSKVEESTNS*
Ga0098048_10394722	3300006752	Marine	MGLRFEEINPPKKEEKPAAKKPAAKKAKDSKVAE*
Ga0070748_11415862	3300006920	Aqueous	MGLRFEEINPPKKEGSSAAAAKKETKKAKSSKVEE*
Ga0098036_10202173	3300006929	Marine	MGMRFEEINPPKNQECPMPEPKKAAKKAKSSKVEESTKD*
Ga0070747_12885802	3300007276	Aqueous	MGLRFEEINPPKKEGSSTSAAKKETKKAKSSKVEE*
Ga0070752_13641801	3300007345	Aqueous	NSFLIMAGLRFEEINPPKKEESPTPSAKKATRKAKSSKVEESTNS*
Ga0102817_10668672	3300007555	Estuarine	MGLRFEEINPPKKEGSSASAAKKETKKAKSSKVEE*
Ga0102855_11993142	3300007647	Estuarine	RVATHQAMAEMRFEEINPPKKEESSPAKKTSKKEKATKVEESTNS*
Ga0105737_10555762	3300007862	Estuary Water	MAEMRFEEINPPKKEESSPAKKTSKKEKATKVEESTNS*
Ga0115013_113538102	3300009550	Marine	VPMGMRFEEINPPKKDECPMPEPKKTTKQAKSSKVEKSTKS*
Ga0098043_10890922	3300010148	Marine	MGMRFEEINPPKKEECPMPEPKKATKKAKSSKVDESTKD*
Ga0098043_11221921	3300010148	Marine	MGMRFEEINPPKNQECPMPEPKKATKKAKSSKVDESTKA*
Ga0136549_100633782	3300010389	Marine Methane Seep Sediment	MGLRFEEINPPKKEEKPAAKKPAAKKAKTSKVEE*
Ga0160423_101828563	3300012920	Surface Seawater	MGLRFEEINPPKKDECPMPAPKKTTKQAKSSKVEKSTKF*
Ga0163109_101252011	3300012936	Surface Seawater	PMGMRFEEINPPKNQECPMPEPKKTTKKVKPSKVDESTKK*
Ga0163109_107531352	3300012936	Surface Seawater	RFEEINPPKKEECPMPEPKKTTKQAKSSKVEKSTKS*
Ga0181369_10723382	3300017708	Marine	MAGLRFEEINPPKKEACPVPLAKKPTKKAKSSKVEESTNS
Ga0181369_10874312	3300017708	Marine	MGLRFEEINPPKKEECPMPAAKKQTKKAKSSKVEE
Ga0181369_11230682	3300017708	Marine	MGLRFEEINPPKKAGSSAPAAKKETKKAKSSKVEE
Ga0181387_10698922	3300017709	Seawater	MGMRFEEINPPKKDECPMPEPKKTTKQVKSSKVEKSTNS
Ga0181387_10847791	3300017709	Seawater	MAGMRFEEINPPKKEASSPARKTNKKEKATKVEESTNS
Ga0181404_10092852	3300017717	Seawater	MGMRFEEINPPKNQECPMPEPKKTTKKAKSSKVDESTKA
Ga0181373_10681571	3300017721	Marine	MGMRFEELNPPKKEQCPMPEPKKTTKKAKSSKVEES
Ga0181401_10018439	3300017727	Seawater	MAGLRFEEINPPKKEECPVPPAKKTTKKAKSSKVEESTNS
Ga0181419_10881132	3300017728	Seawater	MGLRFEEINPPKKEGSSTPAAKKETKKSKSSKVEE
Ga0181426_10061982	3300017733	Seawater	MAGMRFEEINPPKKEESSSTKKTSKKEKATKVEGSTNS
Ga0181431_10512582	3300017735	Seawater	MGLRFEEINPPKKAGSSASAAKKETKKAKSSKVEE
Ga0181399_11419152	3300017742	Seawater	MGLRFEEINPPKKEECPMPAAKKETKKDKSSKVEE
Ga0181389_11848482	3300017746	Seawater	PMGMRFEEINPPKKDECPMPEPKKTTKQAKSSKVEKSTNS
Ga0181400_12019531	3300017752	Seawater	LRFEEINPPKKEECPMPPAKKTARKAKSSKVEESTNS
Ga0181420_10088175	3300017757	Seawater	MAGLRFEEINPPKKEECPMPPAKKTTKKAKSSKVEESTNS
Ga0181408_10205372	3300017760	Seawater	MGLRFEEINPHKKEGSSTPAAKKETKKAKSSKVEE
Ga0181413_10473352	3300017765	Seawater	MGMRFEEINPPKKDECPMPEPKKTTKQAKSSKVEKSTNS
Ga0181406_11092632	3300017767	Seawater	MAGLRFEEINPPKKDECPMPEPKKTTKQAKSSKVEKSTNS
Ga0181406_11597252	3300017767	Seawater	VPMGMRFEEINPPKNQECPMPEPKKTAKKAKSSKVDESTKA
Ga0187217_12020632	3300017770	Seawater	ITALILMGLRFEEINPPKKEGSSASAAKKETKKAKSSKVEE
Ga0181423_12983381	3300017781	Seawater	MAGMRFEEINPPKKEASSPTKKTSKKEKATKVEESTNS
Ga0181424_1000007522	3300017786	Seawater	MGMRFEEINPPKNQECPMPEPKKTTKKVKPSKVDESTKK
Ga0181424_100752063	3300017786	Seawater	VMGLRFEEINPPKKEGSSASAAKKETKKAKSSKVEE
Ga0181577_102642073	3300017951	Salt Marsh	MGLRFEEINPPKKEEKPAATQKAATKKAKDSKVAE
Ga0181563_1000389729	3300018420	Salt Marsh	MGLRFEEINPPKKEEKPAVKKTTATKKTKSSKVAESTDS
Ga0211529_10121002	3300020258	Marine	MGLRFEEINPPKKEDKSAAAKKTATKKTKSSKVDE
Ga0211712_100990612	3300020360	Marine	MGMRFEEINPPKKEECPMPEPKKTTKQAKSSKVEKSTKS
Ga0211527_100144323	3300020378	Marine	MGLRFEEINPPKSQECPMPEPKKTTKKAKPSKVNESTKD
Ga0211677_100152785	3300020385	Marine	MGLRFEEINPPKKEGSPAPAAKKETKKAKSSKVEE
Ga0211678_103593831	3300020388	Marine	VMGLRFEEINPPKKEGSSAPAAKKETKKAKSSKVEE
Ga0211554_1000315711	3300020431	Marine	MGLRFEEINPPKKEGSSASAAKKETKKAKSSKVEE
Ga0211576_100044906	3300020438	Marine	MGLRFEEINPPKKEECPMPATKKETKKAKSSKVEE
Ga0211473_102647282	3300020451	Marine	MGLRFEEINPPKKEGSSASTAKKETKKAKSSKVEE
Ga0213858_100028884	3300021356	Seawater	MGLRFEEINPPKKEEKPAAKKPATKKAKSSTVEKSTNS
Ga0213858_102058681	3300021356	Seawater	IPMGLRFEEINPPKKEEKPAAKKPAAKKAKASKVEE
Ga0213859_100982952	3300021364	Seawater	MGLRFEEINPPKKEEKPAAKKPAAKKAKTSTVEESTNS
Ga0213865_101800462	3300021373	Seawater	MAGMRFEEINPPKKEESSPAKKTSKKEKATKVEESTNS
Ga0222718_1000177529	3300021958	Estuarine Water	MAGLRFEEINPPKKEECPTPPAKRVTKKAKSSKVEESTNS
Ga0224902_1089522	3300022066	Seawater	RGVIRSNLMGLRFEEINPPKKEEKPATAKKTSTKSTKSSKVEKSTDS
Ga0196895_10003966	3300022067	Aqueous	MGLRFEEINPPKKEEAPAKKPAARKTKSTKVEESTDSN
Ga0255773_103460842	3300022925	Salt Marsh	KRLFIMGLRFEEINPPKKEEKPAAKKPAAKKAKDSKVEE
Ga0244775_106488752	3300024346	Estuarine	MGLRFEEINPPKKEESSASAAKKETKKAKSSKVEE
Ga0208157_10010798	3300025086	Marine	MGLRFEEINPPKKEECPMPAAKKETKKAKSSKVEE
Ga0208157_10014973	3300025086	Marine	MGMRFEEINPPKKEECPMPEPKKTTKQAKSSKVEKSTNS
Ga0208157_10614762	3300025086	Marine	MGLRFEEINPPKKEGSSAPAAKKETKKAKASKVEE
Ga0208159_10416482	3300025101	Marine	MGMRFEELNPPKKEQCPMPEPKKTTKKAKSSKVEESTNS
Ga0208666_100012225	3300025102	Marine	MGMRFEEINPPKKEECPMPEPKKATKKAKSSKVDESTKA
Ga0208666_10025368	3300025102	Marine	MGMRFEEINPPKKGECPMPEPKKTTKQAKSSKVEKSTNS
Ga0209535_10323752	3300025120	Marine	MAGLRFEEINPPKKEECPMPPAKKETKKAKSSKVEESTNS
Ga0209535_11064122	3300025120	Marine	MAEMRFEEINPPKKEESSSAKKTSKKEKATKVEESTNS
Ga0209232_11541512	3300025132	Marine	MGLRFEEINPPKKEEKPATAKKTSTKSTKSSKVEKSTDS
Ga0209337_10021852	3300025168	Marine	MGLRFEEINPPKKEGSSASAEKKETKKAKSSKVEE
Ga0208544_100131893	3300025887	Aqueous	MRFEEINPPKKEESSPAKKTSKKEKATKVEESTNS
Ga0257110_10204773	3300028197	Marine	MAEMRFEEINPPKKEESSPAKKTSKKEKATKVEESTNS
Ga0183748_100018827	3300029319	Marine	MGLRFEEINPPKKEEKPAVKKTTATKKTKTSKVAESTDS
Ga0314858_036542_556_678	3300033742	Sea-Ice Brine	MAGLRFEDINPPKKEECPMPPAKKVTKKAKSSKVEESTNS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091006

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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