Metagenome / Metatranscriptome Family F091041

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091041
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	70 residues
Representative Sequence	MSHTYENVMQQLQLGEELIAAAVDELIGRWQASVTVIGKLCAETDRWQAALRQMQAPINLADILRARGPR
Number of Associated Samples	87
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	11.11 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	74.07 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.556 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.148 % of family members)
Environment Ontology (ENVO)	Unclassified (28.704 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.037 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.18% β-sheet: 0.00% Coil/Unstructured: 40.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF04348	LppC	50.00
PF12706	Lactamase_B_2	6.48
PF02021	UPF0102	5.56
PF07969	Amidohydro_3	1.85
PF02167	Cytochrom_C1	1.85
PF14559	TPR_19	1.85
PF00590	TP_methylase	0.93
PF13417	GST_N_3	0.93
PF03717	PBP_dimer	0.93
PF13671	AAA_33	0.93
PF13500	AAA_26	0.93
PF01722	BolA	0.93
PF13371	TPR_9	0.93
PF13485	Peptidase_MA_2	0.93
PF03466	LysR_substrate	0.93
PF04386	SspB	0.93
PF00753	Lactamase_B	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG3107	Outer membrane lipoprotein LpoA, binds and activates PBP1a	Cell wall/membrane/envelope biogenesis [M]	50.00
COG0792	Predicted endonuclease distantly related to archaeal Holliday junction resolvase, YraN/UPF0102 family	Replication, recombination and repair [L]	5.56
COG2857	Cytochrome c1	Energy production and conversion [C]	1.85
COG0768	Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2)	Cell cycle control, cell division, chromosome partitioning [D]	0.93
COG2969	Stringent starvation protein B, binds SsrA peptide	Posttranslational modification, protein turnover, chaperones [O]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.56 %
Unclassified	root	N/A	19.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.56 %
Unclassified	root	N/A	19.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.56 %
Unclassified	root	N/A	19.44 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	54.63 %
Unclassified	root	N/A	19.44 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	37.96 %
Unclassified	root	N/A	19.44 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	27.78 %
Unclassified	root	N/A	19.44 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	27.78 %
Unclassified	root	N/A	19.44 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Steroidobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae	26.85 %
Unclassified	root	N/A	19.44 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	26.85 %
Unclassified	root	N/A	19.44 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001403\|JGI20205J14842_1032444	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300001593\|JGI12635J15846_10089176	All Organisms → cellular organisms → Bacteria	2237	Open in IMG/M
3300004080\|Ga0062385_10075351	All Organisms → cellular organisms → Bacteria	1555	Open in IMG/M
3300004082\|Ga0062384_100186992	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300004092\|Ga0062389_101221667	Not Available	937	Open in IMG/M
3300005436\|Ga0070713_100191371	All Organisms → cellular organisms → Bacteria	1844	Open in IMG/M
3300005458\|Ga0070681_10642038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	976	Open in IMG/M
3300005563\|Ga0068855_100232005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2066	Open in IMG/M
3300005921\|Ga0070766_10973860	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005993\|Ga0080027_10012150	All Organisms → cellular organisms → Bacteria → Proteobacteria	3072	Open in IMG/M
3300005993\|Ga0080027_10425195	All Organisms → cellular organisms → Bacteria → Proteobacteria	536	Open in IMG/M
3300005993\|Ga0080027_10451279	Not Available	520	Open in IMG/M
3300005994\|Ga0066789_10001639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9684	Open in IMG/M
3300006059\|Ga0075017_101529351	Not Available	526	Open in IMG/M
3300006638\|Ga0075522_10582865	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300009093\|Ga0105240_10215445	All Organisms → cellular organisms → Bacteria → Proteobacteria	2241	Open in IMG/M
3300010371\|Ga0134125_11419846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	756	Open in IMG/M
3300010373\|Ga0134128_10399049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1536	Open in IMG/M
3300010396\|Ga0134126_10379064	All Organisms → cellular organisms → Bacteria	1646	Open in IMG/M
3300010396\|Ga0134126_11181565	Not Available	851	Open in IMG/M
3300010396\|Ga0134126_12921637	Not Available	517	Open in IMG/M
3300010860\|Ga0126351_1004523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	555	Open in IMG/M
3300010876\|Ga0126361_10584101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1350	Open in IMG/M
3300010880\|Ga0126350_12141483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1703	Open in IMG/M
3300012925\|Ga0137419_11403514	Not Available	589	Open in IMG/M
3300012944\|Ga0137410_10103949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	2110	Open in IMG/M
3300014167\|Ga0181528_10649754	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300014168\|Ga0181534_10098922	Not Available	1459	Open in IMG/M
3300014501\|Ga0182024_10162491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	3116	Open in IMG/M
3300014501\|Ga0182024_11444405	All Organisms → cellular organisms → Bacteria → Proteobacteria	789	Open in IMG/M
3300014658\|Ga0181519_10931601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	539	Open in IMG/M
3300014838\|Ga0182030_10067183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5382	Open in IMG/M
3300014838\|Ga0182030_10133362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3239	Open in IMG/M
3300015080\|Ga0167639_1025158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	829	Open in IMG/M
3300015082\|Ga0167662_1017194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	913	Open in IMG/M
3300019270\|Ga0181512_1683836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	713	Open in IMG/M
3300020021\|Ga0193726_1000116	All Organisms → cellular organisms → Bacteria	120475	Open in IMG/M
3300020579\|Ga0210407_10485963	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300020580\|Ga0210403_11151501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	600	Open in IMG/M
3300020581\|Ga0210399_10284168	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300020581\|Ga0210399_10718657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	820	Open in IMG/M
3300021170\|Ga0210400_10381027	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300021171\|Ga0210405_10217002	All Organisms → cellular organisms → Bacteria → Proteobacteria	1516	Open in IMG/M
3300021181\|Ga0210388_11199786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	644	Open in IMG/M
3300021404\|Ga0210389_11186116	All Organisms → cellular organisms → Bacteria → Proteobacteria	588	Open in IMG/M
3300021405\|Ga0210387_10143551	All Organisms → cellular organisms → Bacteria	2037	Open in IMG/M
3300021406\|Ga0210386_11755538	Not Available	512	Open in IMG/M
3300021420\|Ga0210394_10015389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7288	Open in IMG/M
3300021420\|Ga0210394_10073679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2956	Open in IMG/M
3300021420\|Ga0210394_10739958	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300021432\|Ga0210384_10266578	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300021433\|Ga0210391_10069118	All Organisms → cellular organisms → Bacteria	2795	Open in IMG/M
3300021475\|Ga0210392_10962779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	639	Open in IMG/M
3300021477\|Ga0210398_10436231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1068	Open in IMG/M
3300021478\|Ga0210402_10047105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3760	Open in IMG/M
3300021478\|Ga0210402_11661268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	565	Open in IMG/M
3300021478\|Ga0210402_11792684	Not Available	540	Open in IMG/M
3300021479\|Ga0210410_11633529	All Organisms → cellular organisms → Bacteria → Proteobacteria	538	Open in IMG/M
3300024176\|Ga0224565_1047603	All Organisms → cellular organisms → Bacteria → Proteobacteria	504	Open in IMG/M
3300025504\|Ga0208356_1020564	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300025509\|Ga0208848_1001417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4555	Open in IMG/M
3300025634\|Ga0208589_1032876	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300025905\|Ga0207685_10412847	All Organisms → cellular organisms → Bacteria → Proteobacteria	694	Open in IMG/M
3300025913\|Ga0207695_10105701	All Organisms → cellular organisms → Bacteria → Proteobacteria	2802	Open in IMG/M
3300025913\|Ga0207695_11360624	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300026281\|Ga0209863_10009353	All Organisms → cellular organisms → Bacteria	3138	Open in IMG/M
3300026291\|Ga0209890_10015420	All Organisms → cellular organisms → Bacteria	3040	Open in IMG/M
3300026291\|Ga0209890_10209132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	622	Open in IMG/M
3300027439\|Ga0209332_1000788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	7089	Open in IMG/M
3300027439\|Ga0209332_1045872	Not Available	808	Open in IMG/M
3300027591\|Ga0209733_1027602	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300027633\|Ga0208988_1045243	Not Available	1127	Open in IMG/M
3300027660\|Ga0209736_1000061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	36329	Open in IMG/M
3300027737\|Ga0209038_10105057	Not Available	853	Open in IMG/M
3300027908\|Ga0209006_10288726	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300027908\|Ga0209006_10301663	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300028773\|Ga0302234_10245901	All Organisms → cellular organisms → Bacteria → Proteobacteria	771	Open in IMG/M
3300028792\|Ga0307504_10153304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	784	Open in IMG/M
3300028800\|Ga0265338_10092192	Not Available	2500	Open in IMG/M
3300029911\|Ga0311361_10058958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6012	Open in IMG/M
3300029951\|Ga0311371_10273255	All Organisms → cellular organisms → Bacteria	2413	Open in IMG/M
3300030520\|Ga0311372_10123158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4604	Open in IMG/M
3300030580\|Ga0311355_11091677	All Organisms → cellular organisms → Bacteria → Proteobacteria	711	Open in IMG/M
3300030617\|Ga0311356_10950042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	806	Open in IMG/M
3300030626\|Ga0210291_11550583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	526	Open in IMG/M
3300030998\|Ga0073996_12180225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	676	Open in IMG/M
3300031023\|Ga0073998_11421422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	508	Open in IMG/M
3300031047\|Ga0073995_11840661	Not Available	653	Open in IMG/M
3300031231\|Ga0170824_105505392	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300031231\|Ga0170824_114922968	Not Available	868	Open in IMG/M
3300031231\|Ga0170824_128754073	Not Available	509	Open in IMG/M
3300031236\|Ga0302324_100299149	All Organisms → cellular organisms → Bacteria	2469	Open in IMG/M
3300031240\|Ga0265320_10185449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	932	Open in IMG/M
3300031446\|Ga0170820_12446534	Not Available	562	Open in IMG/M
3300031446\|Ga0170820_15460807	Not Available	761	Open in IMG/M
3300031469\|Ga0170819_15825106	Not Available	613	Open in IMG/M
3300031474\|Ga0170818_111866411	Not Available	1001	Open in IMG/M
3300031525\|Ga0302326_11135621	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300031708\|Ga0310686_100105224	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300031708\|Ga0310686_110422139	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300031708\|Ga0310686_112912121	All Organisms → cellular organisms → Bacteria → Proteobacteria	3442	Open in IMG/M
3300031715\|Ga0307476_10058211	All Organisms → cellular organisms → Bacteria	2651	Open in IMG/M
3300031715\|Ga0307476_11257807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	541	Open in IMG/M
3300031788\|Ga0302319_11955357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	500	Open in IMG/M
3300032180\|Ga0307471_103062239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	593	Open in IMG/M
3300032515\|Ga0348332_12313419	Not Available	874	Open in IMG/M
3300033824\|Ga0334840_106611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	770	Open in IMG/M
3300034282\|Ga0370492_0386447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	568	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.44%
Host-Associated	Host-Associated	5.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.11%
Aquatic	Environmental → Aquatic	8.33%
Plants	Host-Associated → Plants	5.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.00%
Peat	Environmental → Terrestrial → Peat	9.26%
Freshwater	Environmental → Aquatic → Freshwater	7.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.63%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.85%
Sediment	Environmental → Aquatic → Sediment	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.11%
Loam	Environmental → Terrestrial → Soil → Loam	11.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	10.19%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.41%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	6.48%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.63%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	4.63%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.70%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	3.70%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.78%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.85%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.85%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.93%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.93%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.93%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.93%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001403	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015080	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6C, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015082	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11c, vegetated hydrological feature)	Environmental	Open in IMG/M
3300019270	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300024176	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1	Environmental	Open in IMG/M
3300025504	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030626	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE110SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031023	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20205J14842_10324442	3300001403	Arctic Peat Soil	MNHAFENVMHQVQLGEELIAAGVDELFRRWQSSVTVIGKLCAETDRWHAVFRQMQSPVNLAEILRGRT
JGI12635J15846_100891762	3300001593	Forest Soil	MSHTYENVMHQLQLGEELVAAAVDELFSRWQASVTVIGKLCSETDRWQAAFRQIQVQMQNPVNLADILRARALR*
Ga0062385_100753512	3300004080	Bog Forest Soil	MNHALENALRPLQLGEALITAGVEELYRRWQASTHAIGKLCPGAERWQAVLRQMHAPINLAEILRSRTIL*
Ga0062384_1001869922	3300004082	Bog Forest Soil	MNHALENALRPLQLGEALITAGVEELYRRWQASTHAIGKLCPGAERWQAVLRQMHAPINLAEILRARTIL*
Ga0062389_1012216671	3300004092	Bog Forest Soil	MNHALENAMRPLQVGEALITAGVEELYRRWHASASAIGKLCPGAERWQAVFRQMQAPINLAEILRARTLL*
Ga0070713_1001913712	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MIGNPLANAMHQLELGEELLNAGVDELFRRWQASATAIGKLCAGTERWQAVFRQMQAPLNLAEILRARTIL*
Ga0070681_106420382	3300005458	Corn Rhizosphere	MKSALQNVMRPFEFGEELIAAGVDELFRRWQASATVIGKLCAESERWKAALGRIQAPVSLADILRERTAP*
Ga0068855_1002320051	3300005563	Corn Rhizosphere	MKSALQNVMRPFEFGEELIAAGVDELFRRWRASATVIGKLCAESERWKAALGRIQAPVSLADILRERTAP*
Ga0070766_109738602	3300005921	Soil	MSHTYENVMQQLQLGEELIAAAVDELIGRWQASVTVIGKLCAETDRWQAALRQMQAPINLADILRARGPR*
Ga0080027_100121502	3300005993	Prmafrost Soil	MGHTFENVLHQVQLGEDLIATAVDELIERWQASVTVIGKLCTESDRWQAVIRQMQAPVSLADILRARSIR*
Ga0080027_104251952	3300005993	Prmafrost Soil	MNKALENVMYPLQLGEELIAAGVDELFRRWQASASAIGKLCTGAERWQAALRQIQAPINLAEILRARTIL*
Ga0080027_104512792	3300005993	Prmafrost Soil	MMSHPLSNELLTAGVDELFRRWQASATAIGKLCAGTERWQAVFRQMQAPLNLAEILRARTIL*
Ga0066789_1000163910	3300005994	Soil	MSHTYENVMHQLQLGEELVAAAVDELFSRWQASVTVIGKLCAETDRWQAAFRQIQAPVNLADILRARALR*
Ga0075017_1015293511	3300006059	Watersheds	MGHTFENAMHQLQLGEELIAAGVDEMFRRWQKHSATVIGKLCAPADRWQAMLRQMQAPVNLADILRSRTLI*
Ga0075522_105828651	3300006638	Arctic Peat Soil	MNHAFENVMHQVQLGEELIAAGVDELFRRWQSSVTVIGKLCAETDRWHAVFRQMQSPVNLAEILRGRTAL*
Ga0105240_102154452	3300009093	Corn Rhizosphere	MKNALQNVMRSFEFGEELIAAGADELFRRWQASATVIGKLCAEPERWKAALGRIQAPVNLADILRRRTAP*
Ga0134125_114198461	3300010371	Terrestrial Soil	MKSALQNVMRPFEFGEELIAAGVDELFRRWQASATVIGKLCTESERWKAALGRIQAPVNLADILRRRTAP*
Ga0134128_103990491	3300010373	Terrestrial Soil	FPLRLNCSTLCRVMKSALQNVMRPFECGEELIAAGVDELFRRWRASATVIGKLCTESERWKAALGRIQAPVSLADILRERTAP*
Ga0134126_103790641	3300010396	Terrestrial Soil	MKNALQNVMRSFEFGEELIAAGADELFRRWQASATVIGKLCAEPERWKAALGRIQAPVNLADI
Ga0134126_111815651	3300010396	Terrestrial Soil	MKNALQNVMRSFEFGEELIAAGVDELFRRWQASATVIGKLCAEPERWKAALGRIQAPVNLADI
Ga0134126_129216372	3300010396	Terrestrial Soil	MKSALQNVMRPFEFGEELIAAGVDELFRRWRASATVIGKLCTESERWKAALGRIQAPVSLADILRERTAP*
Ga0126351_10045232	3300010860	Boreal Forest Soil	MSHTYENVMHQLQLGEELVAAAVDELFSRWQASVTVIGKLCAETDRWQAAFRQIQAQIQAPVNLADILRARALR*
Ga0126361_105841011	3300010876	Boreal Forest Soil	TYENVMQQLQLGEELIAAAVDELIGRWQASVTVIGKLCAETDRWQAALRQMQAPTNLADILRARKPR*
Ga0126350_121414832	3300010880	Boreal Forest Soil	LQLGEELVAAAVDELFSRWQASVTVIGKLCAETDRWQAAFRQIQAQIQAPVNLADILRARALR*
Ga0137419_114035141	3300012925	Vadose Zone Soil	MAHTYENVMHQLQLGEELIAAAVDELVCRWQASVTVIGKICTEADRWKAVLHQMQAPVNFADILRARAPR*
Ga0137410_101039492	3300012944	Vadose Zone Soil	MIGSPLANAMHQLELGEELLNAGVDELFRCWQASATVIGKLCAGTDRWQAVFRQMQAPLNLAEILRARTIL*
Ga0181528_106497542	3300014167	Bog	MSHTFENVLHQVQLGEELITAAVDELFSRWRASVTVIGKLCTETDRWQSVIRQMQTPVNLADILRARTFR*
Ga0181534_100989221	3300014168	Bog	MIYTFAQMEHAFENLMHRLQLGEELLGAGAEELFRRWRASTQAIGKLCAGTDRWQAAFRQMQAPINLAEILRART*
Ga0182024_101624913	3300014501	Permafrost	MHPLQLGEELIAAGVDELFRRWQASANAIGKFCTGAERWQAAFREMQAPINLAEILRARTIL*
Ga0182024_114444052	3300014501	Permafrost	MNRALENVMHQVQLGEELIAAGVDELFRRWQASVTVIGKLCAETDRWHAVFRQMQAPVNLAEILRGRTAL*
Ga0181519_109316011	3300014658	Bog	VLHQVQLGEELITAAVDELFSRWRASVTVIGKLCTETDRWQSVIRQMQTPVNLADILRARTFR*
Ga0182030_100671836	3300014838	Bog	MTNTFDSVMHQLQLGEDLVAAGVDELFRRWQASTHAIGKLCTGAERWQAALRWQAALRQLQAPVNLAEILRARTIL*
Ga0182030_101333621	3300014838	Bog	MNHAFENVMHQVQLGEELIAAGVDGLYRRWQASVTVIGKFCAETDRWQAVLRQMQAPVNLAEILRSRTAR*
Ga0167639_10251582	3300015080	Glacier Forefield Soil	PMSHTFENVMHQLQLGEELIAAGVDELFRGWKASTNAIGKLCTGAERWQAALRQMQAPVNLAEILRGRTIL*
Ga0167662_10171941	3300015082	Glacier Forefield Soil	SLSWPTIFSMSHTFENVMHQVQLGEELVGAAVDELFSRWQASVTVIGKLCKETDRWQAVIRQMQTPINLADILRARTTR*
Ga0181512_16838362	3300019270	Peatland	MIYTFAQMEHAFENLMHRLQLGEELLGAGAEELFRRWRASTQAIGKLCAGTDRWQAAFRQMQAPINLAEILRART
Ga0193726_1000116109	3300020021	Soil	MGNSLANAMHQLQLGEELLTAGVDELVRRWQASANALGKLCIGPERWQAAFRQMQAPLNLAEILRSRTIL
Ga0210407_104859632	3300020579	Soil	MSHTYENVMQQLQLGEELIAAAVDELIGRWQASVTVIGKLCAETDRWQAALRQMQAPINLADILRARGPR
Ga0210403_111515011	3300020580	Soil	MHQLQLGEELIAAAVDELVGRWQASVTVIGKICTEADRWKAVLHQMQAPVNFADILRARTPR
Ga0210399_102841682	3300020581	Soil	MSHTYENVMQQLQLGEELIASAVDELVGRWQASVTVIGKLCAETDRWQAALRQMQAPINLADILRARGPR
Ga0210399_107186572	3300020581	Soil	MGHTYENVMHQLQLGEELIAAAVDELVGRWQASVTVIGKICTEADRWKAVLHQMQAPVNFADILRARTPR
Ga0210400_103810273	3300021170	Soil	MSHTYENVMQQLQLGEELIAAAVDELVGRWQASVTVIGKLCAETDRWQAALRQMQAPINLADILRAR
Ga0210405_102170023	3300021171	Soil	LLYNFRAMSHTYENVMQQLQLGEELIASAVDELIGRWRASVTVIGKLCAETDRWQAALRQMQAPINLADILRARGPR
Ga0210388_111997862	3300021181	Soil	LLYNFHAMSHTYENVMQQLQLGEELIASAVDELIGRWRASVTVIGKLCAETDRWQAALRQMQAPINLADILRARGPR
Ga0210389_111861161	3300021404	Soil	MGNPLANAMHELQLGEELIAGVDELIRRWQASTSALGKLYTGAERWQRAFREMQAPLNLAEILRARTIP
Ga0210387_101435512	3300021405	Soil	MSHTYENVMQQLQLGEELIASAVDELIGRWQASVTVIGKLCAETDRWQAALRQMQAPINLADILRARGPR
Ga0210386_117555382	3300021406	Soil	MSHTYENVMQQLQLGEELIAAAVDELIGRWQASVTVIGKLCAETDRWQAALHQMQAPINLADILRARGPR
Ga0210394_100153898	3300021420	Soil	LLYNFHAMSHTYENVMQQLQLGEELIASAVDELIGRWRASVTVIGKLCAETDRWQAALHQMQAPINLADILRARGPR
Ga0210394_100736793	3300021420	Soil	MSHTYESVMHQLQLGEGLIAAGVDELFRRWQASANAIGKFCTGAERWQAAFRQMQAPVDLAEILRARTIL
Ga0210394_107399582	3300021420	Soil	MSHTYENVMHQLQLGEELVAAAVDELFSRWQASVTVIGKLCAETDRWQAAFRQIQAQIQAPVNLADILRARALR
Ga0210384_102665782	3300021432	Soil	MAHTFENVMHQLQLGEELIAAGVDEMFRRWQKHSATVIGKLCAPADRWQAVLRQMQAPVNFADILRSRTLI
Ga0210391_100691183	3300021433	Soil	MSHTYENVMQQLQLGEELIASAVDELIGRWRASVTVIGKLCAETDRWQAALHQMQAPINLADILRARGPR
Ga0210392_109627791	3300021475	Soil	SLTNAMHQLQLGEELLTAGVDELVRRWQASANALGKLCIGPERWQAAFRQMQAPLNLAEILRSRTIL
Ga0210398_104362312	3300021477	Soil	FHAMSHTYENVMQQLQLGEELIASAVDEFIGRWRASVTVIGKLCAETDRWQAALHQMQAPINLADILRARGPR
Ga0210402_100471057	3300021478	Soil	MGHTYENVMHQLQLGEELIAAAVDELVGRWQASVTVIGKICTEADRWKAVLHQMQAPVN
Ga0210402_116612681	3300021478	Soil	VMHQLQLGEELIAAAVDELVGRWQASVTVIGKICTEADRWKAVLHQMQAPVNFADILRARTPR
Ga0210402_117926842	3300021478	Soil	MSHTFENVLHQVQLGEDLIAKAVDELIGRWQQSVTVIGKLCAETDRWQAVIRQMQAPVNLADILRARSIR
Ga0210410_116335292	3300021479	Soil	MSHTYENVMQQLQLGEELIAAAVDELVGRWQASVTVIGKLCAETDRWQAALRQMQAPINLADILRARGPR
Ga0224565_10476032	3300024176	Plant Litter	MNHAFDNVLHQVQLGEELIAAGVDELFRRWQASVTVIGKLCAETDRWQAVFRQMQAPVNLAEILRGRTLR
Ga0208356_10205642	3300025504	Arctic Peat Soil	MQQLQLGEELIAAAVDELVGRWQASVTVIGKLCAETDRWRAALRQMQAPINLADILRARGPR
Ga0208848_10014173	3300025509	Arctic Peat Soil	MSNTLENVMHPLQLGEELIAAGVDELFRRWQASANAIGKFCTGSERWQAAFRQMQAPINLAEILRARTIL
Ga0208589_10328764	3300025634	Arctic Peat Soil	MNHAFENVMHQVQLGEELIAAGVDELFRRWQSSVTVIGKLCAETDRWHAVFRQMQSPVNLAEILRGRTAL
Ga0207685_104128472	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MIGNPLANAMHQLELGEELLNAGVDELFRRWQASATAIGKLCAGTERWQAVFRQMQAPLDLAEILRARTIL
Ga0207695_101057012	3300025913	Corn Rhizosphere	MKNALQNVMRSFEFGEELIAAGADELFRRWQASATVIGKLCAEPERWKAALGRIQAPVNLADILRRRTAP
Ga0207695_113606242	3300025913	Corn Rhizosphere	MKSALQNVMRPFEFGEELIAAGVDELFRRWQASATVIGKLCAESERWKAALGRIQAPVSLADILRERTAP
Ga0209863_100093534	3300026281	Prmafrost Soil	MMSHPLSNELLTAGVDELFRRWQASATAIGKLCAGTERWQAVFRQMQAPLNLAEILRARTIL
Ga0209890_100154203	3300026291	Soil	MSHTYENVMHQLQLGEELVAAAVDELFSRWQASVTVIGKLCAETDRWQAAFRQIQAPVNLADILRARALR
Ga0209890_102091323	3300026291	Soil	MNKALENVMYPLQLGEELIAAGVDELFRRWQASASAIGKLCTGAERWQAALRQIQAPINLAEILRARTIL
Ga0209332_10007881	3300027439	Forest Soil	NVMHQLQLGEELVAAAVDELFSRWQASVTVIGKLCAETDRWQAAFRQIQAQIQAPVNLADILRARALR
Ga0209332_10458722	3300027439	Forest Soil	MSHTYENVMHQLQLGEGLIAAGVDELFRRWQASANAIGKFCTGAERWQAAFRQMQAPVDLAEILRARTIL
Ga0209733_10276022	3300027591	Forest Soil	MSHTYENVMHQLQLGEELVAAAVDELFSRWQASVTVIGKLCAETDRWQAAFRQIQVQMQNPVNLADILRARALR
Ga0208988_10452432	3300027633	Forest Soil	MGHTYENVMHQFQLGEELIAAAVDELVCRWQASVTVIGKICTEADRWKAVLHQMQAPVNFADILRARTPR
Ga0209736_10000613	3300027660	Forest Soil	MSHTYENVMHQLQLGEELVAAAVDELFSRWQASVTVIGKLCSETDRWQAAFRQIQVQMQNPVNLADILRARALR
Ga0209038_101050572	3300027737	Bog Forest Soil	MNHALENALRPLQLGEALITAGVEELYRRWQASTHAIGKLCPGAERWQAVLRQMHAPINLAEILRARTIL
Ga0209006_102887262	3300027908	Forest Soil	MSHTYENVMQQLQLGEELIAAAVDELVGRWQASVTVIGKLCAETDRWQAALRQMQAPINLADILRARGAR
Ga0209006_103016632	3300027908	Forest Soil	MSHTYENVMQQLQLGEELIAAAVDELVGRWQASVTVIGKLCAETDRWQAALRQMQAPINLADILRARGRR
Ga0302234_102459012	3300028773	Palsa	MNHALENAMRPLQLGEALITAGVEELYRRWQASTQAIGKLCPGAERWQAVFRQMQAPINLAEILRARTIL
Ga0307504_101533042	3300028792	Soil	MSHTFENVLHQVQLGEDLIASAVDELISRWQASVTVIGKLCTETDRWQAVIRQMQAPVNLADILRARARR
Ga0265338_100921922	3300028800	Rhizosphere	MSHTFENVLHQVQLGEELIAAAVDELIGRWQASVTVIGKLCKETDRWQAAIRQMQAPVSLADILRARTVR
Ga0311361_100589585	3300029911	Bog	MNHAFENVMHQVQLGEELIAAGVDGLYRRWQASVTVIGKFCAETDRWQAVLRQMQAPVNLAEILRSRTAR
Ga0311371_102732552	3300029951	Palsa	MSCLEIDQKRTTITQEEWFPMNHALENAMRPLQLGEALITAGVEELYRRWQASTQAIGKLCPGAERWQAVLRQMQTPINLAEILRARTIL
Ga0311372_101231583	3300030520	Palsa	MNHALENAMRPLQLGEALITAGVEELYRRWQASTQAIGKLCPGAERWQAVLRQMQTPINLAEILRARTIL
Ga0311355_110916771	3300030580	Palsa	MNHALENAMRPLQLGEALITAGVEELYRRWQASTQAIGKLCPGAERWQAVLRQMQTPINL
Ga0311356_109500422	3300030617	Palsa	TTITQEEWFPMNHALENAMRPLQLGEALITAGVEELYRRWQASTQAIGKLCPGAERWQAVLRQMQTPINLAEILRARTIL
Ga0210291_115505832	3300030626	Soil	HTYENVMQQLQLGEELIAAAVDELIGRWQASVTVIGKLCAETDRWQAALRQMQAPINLADILRARGPR
Ga0073996_121802252	3300030998	Soil	VLHQVQLGEDLIAAAVDELIGRWQASVTVIGKLCTETDRWHAVIRQMQAPVNLADILRARAIR
Ga0073998_114214222	3300031023	Soil	VFDNVWQQLQIGEELIADGIDVLVRRWQASATVIGKLCAADERWRAALRQIQAPAVNLAEILRARTII
Ga0073995_118406612	3300031047	Soil	LGEELIAAAVDELVCRWQASVTVIGKICTEADRWKAVLHQMQAPVNFADILRARAPR
Ga0170824_1055053921	3300031231	Forest Soil	MIGNPLANAMHQLELGEELLNAGVDELFRRWQASATAIGKLCAGTERWQAVFRQMQAPLNLAEILRARTI
Ga0170824_1149229681	3300031231	Forest Soil	MSHTFENVLHQVQLGEDLIGAAVDELISRWQQSVTVIGKLCAETDRWQSVIRQMQTPVNLADILRARAIR
Ga0170824_1287540732	3300031231	Forest Soil	MGNPIANAMHQLQLGEELLTAGVDELIRRWQASASALGKLCIGPERWQAAFREMQAPLNLAEILRSRTIL
Ga0302324_1002991494	3300031236	Palsa	MNNALKHMLHQLQLGEDLISAGADELFRRWQASTNAIGRLCTGAERWQATLRQMPVKGDLAEILRARTIP
Ga0265320_101854492	3300031240	Rhizosphere	MSNPFENVMHSLQLGEELVAAGVDELFRRWQASTNALGKLCTGAVCTGAERWQAAFREMQAPINLAEILRARP
Ga0170820_124465342	3300031446	Forest Soil	MGNPIANAMHQLQLGEELLTAGVDELVRRWQASTNALGKLCIGPERWQAAFRQMQAPLNLAEILRSRTTP
Ga0170820_154608071	3300031446	Forest Soil	MSHTFENVLHQVQLGEDLIGAAVDELISRWQQSVTVIGKLCAETDRWQAVIRQMQAPVNLADILRARSVR
Ga0170819_158251062	3300031469	Forest Soil	MIGNPLANAMHQLELGEELLNAGVDELFRRWQASATAIGKLCAGPERWQAVFRQMQAPLNLAEILRARTIL
Ga0170818_1118664112	3300031474	Forest Soil	MSHTFENVLHQVQLGEDLIAAAVDGLIDRWQQSVTVIGKLCAETDRWQAVIRQMQAPVNLADILRARSVR
Ga0302326_111356211	3300031525	Palsa	AVMNNALKHMLHQLQLGEDLISAGADELFRRWQASTNAIGRLCTGAERWQATLRQMPVKGDLAEILRARTIP
Ga0310686_1001052243	3300031708	Soil	MNHAFENVMHQVQLGEELVAAGVDELYRRWQASVTVIGKLCAETDRWQAVLRQIQTPVNLAEILR
Ga0310686_1104221392	3300031708	Soil	MNHAFENVMHRVQLGEELIAAGVDELFRRWQASVTVIGKLYVETDRWHAVFRQMQSPVNLAEILRGRTAP
Ga0310686_1129121214	3300031708	Soil	MNHAFDNVMHQVQLGEELIAAGVDELFRRWQASVTVIGKLCAETDRWQAVFRQMQAPVNLAEILRGRTLR
Ga0307476_100582113	3300031715	Hardwood Forest Soil	MSHTYENVMQQLQLGEELIAAAVDELVGRWQASVTVIGKLCAETDRWQAALRQIQAPINLADILRARGRR
Ga0307476_112578072	3300031715	Hardwood Forest Soil	MRYVLNDVWNPLQLGEELISDGLDVLVRRWQASATALGKMCTGTERWQAALRQIQAPMNLAEILRNRTII
Ga0302319_119553571	3300031788	Bog	FPTMNHAFENVMHQVQLGEELITAGVDGLYRRWQASVTVIGKFCAETDRWQAVLRQMQAPVNLAEILRSRTAR
Ga0307471_1030622391	3300032180	Hardwood Forest Soil	MIGNPLANAMHRLELGEELLNAGVDELFRRWQASATAIGKLCAGTERWQAVFRQMQAPLNLAEILRNR
Ga0348332_123134192	3300032515	Plant Litter	MNHAFDNVMHQVQLGEELIAAGVDELFRRWQASVTVIGKLCAETDRWQAVFRQMQAPVNLAEILRGRTAR
Ga0334840_106611_484_696	3300033824	Soil	MTNTLDNVIHQLQLGEELIASGVDELFRRWLASTHAIGKLCTGAERWQAALRQIQAPVNLADILRARTIL
Ga0370492_0386447_158_364	3300034282	Untreated Peat Soil	MNRAFVNLTHQLQLGEELLAAGADGLFRRWQASTQAIGRLCAGTERWQAAFRQMKAPINLAEILRART

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091041

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences