Metagenome Family F091214

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091214
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	46 residues
Representative Sequence	MRKPWVRPKELTLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWDK
Number of Associated Samples	65
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	67.89 %
% of genes near scaffold ends (potentially truncated)	31.78 %
% of genes from short scaffolds (< 2000 bps)	74.77 %
Associated GOLD sequencing projects	54
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (45.794 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (42.056 % of family members)
Environment Ontology (ENVO)	Unclassified (90.654 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (97.196 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.87% β-sheet: 0.00% Coil/Unstructured: 39.13%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF04545	Sigma70_r4	6.54
PF05257	CHAP	2.80
PF07659	DUF1599	1.87
PF01930	Cas_Cas4	1.87
PF02467	Whib	1.87
PF12705	PDDEXK_1	1.87
PF06210	DUF1003	0.93
PF05866	RusA	0.93
PF03237	Terminase_6N	0.93
PF01471	PG_binding_1	0.93
PF01844	HNH	0.93
PF07120	DUF1376	0.93
PF00227	Proteasome	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1468	CRISPR/Cas system-associated exonuclease Cas4, RecB family	Defense mechanisms [V]	1.87
COG0638	20S proteasome, alpha and beta subunits	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG3484	Predicted proteasome-type protease	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG3756	Uncharacterized conserved protein YdaU, DUF1376 family	Function unknown [S]	0.93
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.93
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	0.93
COG5405	ATP-dependent protease HslVU (ClpYQ), peptidase subunit	Posttranslational modification, protein turnover, chaperones [O]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.21 %
Unclassified	root	N/A	45.79 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	46.73 %
Unclassified	root	N/A	45.79 %
cellular organisms	root	All Organisms → cellular organisms	7.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.79 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	42.99 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.79 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	42.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.79 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	42.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.79 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	42.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.79 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	33.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.79 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	33.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
Freshwater phage uvFW-CGR-AMD-COM-C429	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C429	0.93 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000176\|TB03JUN2009E_c015549	Not Available	1237	Open in IMG/M
3300000203\|TB18AUG2009E_c007619	Not Available	1447	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1002359	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	13154	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1034369	All Organisms → Viruses → Predicted Viral	2057	Open in IMG/M
3300002091\|JGI24028J26656_1003339	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	2729	Open in IMG/M
3300002091\|JGI24028J26656_1005585	Not Available	1871	Open in IMG/M
3300002091\|JGI24028J26656_1018573	Not Available	712	Open in IMG/M
3300002092\|JGI24218J26658_1006068	Not Available	2362	Open in IMG/M
3300002092\|JGI24218J26658_1006286	Not Available	2302	Open in IMG/M
3300002092\|JGI24218J26658_1024140	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	793	Open in IMG/M
3300002092\|JGI24218J26658_1037629	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	567	Open in IMG/M
3300002092\|JGI24218J26658_1037871	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	564	Open in IMG/M
3300002098\|JGI24219J26650_1006571	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2241	Open in IMG/M
3300002098\|JGI24219J26650_1030197	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	667	Open in IMG/M
3300002098\|JGI24219J26650_1041499	Not Available	531	Open in IMG/M
3300002301\|JGI24891J29808_1004553	Not Available	1560	Open in IMG/M
3300002301\|JGI24891J29808_1017427	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	603	Open in IMG/M
3300002307\|JGI24890J29729_1018304	Not Available	1725	Open in IMG/M
3300002307\|JGI24890J29729_1028118	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1235	Open in IMG/M
3300002933\|G310J44882_10008525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3193	Open in IMG/M
3300002933\|G310J44882_10024859	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1494	Open in IMG/M
3300003783\|Ga0007850_1000082	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	9513	Open in IMG/M
3300003809\|Ga0007869_1027556	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	504	Open in IMG/M
3300003813\|Ga0007879_1012475	Not Available	944	Open in IMG/M
3300003815\|Ga0007856_1003826	Not Available	1207	Open in IMG/M
3300003815\|Ga0007856_1006142	Not Available	868	Open in IMG/M
3300003815\|Ga0007856_1008518	Not Available	703	Open in IMG/M
3300003823\|Ga0007875_1014412	Not Available	928	Open in IMG/M
3300003852\|Ga0031655_10012605	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4268	Open in IMG/M
3300003852\|Ga0031655_10385172	Not Available	521	Open in IMG/M
3300004686\|Ga0065173_1073258	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	617	Open in IMG/M
3300004692\|Ga0065171_1033228	Not Available	831	Open in IMG/M
3300004694\|Ga0065170_1042396	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	610	Open in IMG/M
3300004770\|Ga0007804_1036477	All Organisms → Viruses → Predicted Viral	1317	Open in IMG/M
3300004770\|Ga0007804_1045038	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300004770\|Ga0007804_1050065	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1099	Open in IMG/M
3300004770\|Ga0007804_1074606	Not Available	874	Open in IMG/M
3300004770\|Ga0007804_1185432	Not Available	517	Open in IMG/M
3300004774\|Ga0007794_10193434	Not Available	606	Open in IMG/M
3300004807\|Ga0007809_10097779	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	897	Open in IMG/M
3300006071\|Ga0007876_1157872	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	563	Open in IMG/M
3300006072\|Ga0007881_1168768	Not Available	530	Open in IMG/M
3300006072\|Ga0007881_1172415	Not Available	523	Open in IMG/M
3300006104\|Ga0007882_10152959	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300006105\|Ga0007819_1025971	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300006105\|Ga0007819_1106315	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	554	Open in IMG/M
3300006112\|Ga0007857_1017574	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300006114\|Ga0007815_1006588	All Organisms → cellular organisms → Bacteria	2995	Open in IMG/M
3300006116\|Ga0007807_1062668	Not Available	713	Open in IMG/M
3300006118\|Ga0007859_1014412	Not Available	1779	Open in IMG/M
3300006118\|Ga0007859_1021412	Not Available	1421	Open in IMG/M
3300006120\|Ga0007867_1086473	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	678	Open in IMG/M
3300006120\|Ga0007867_1097171	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300009175\|Ga0073936_10220265	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1316	Open in IMG/M
3300009175\|Ga0073936_10496596	Not Available	718	Open in IMG/M
3300009502\|Ga0114951_10007402	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	9336	Open in IMG/M
3300009502\|Ga0114951_10374497	Not Available	715	Open in IMG/M
3300009502\|Ga0114951_10433250	Not Available	651	Open in IMG/M
3300013093\|Ga0164296_1191119	Not Available	794	Open in IMG/M
3300013093\|Ga0164296_1236905	Not Available	694	Open in IMG/M
3300013285\|Ga0136642_1026836	Not Available	1656	Open in IMG/M
3300013285\|Ga0136642_1096423	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	765	Open in IMG/M
3300020686\|Ga0214194_104288	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1371	Open in IMG/M
3300020686\|Ga0214194_112720	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	736	Open in IMG/M
3300020686\|Ga0214194_115992	Not Available	644	Open in IMG/M
3300020716\|Ga0214207_1002543	All Organisms → Viruses → Predicted Viral	3587	Open in IMG/M
3300020716\|Ga0214207_1004244	Not Available	2359	Open in IMG/M
3300020716\|Ga0214207_1030983	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	613	Open in IMG/M
3300020717\|Ga0214248_1024923	Not Available	811	Open in IMG/M
3300020726\|Ga0214220_1034012	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	689	Open in IMG/M
3300020727\|Ga0214246_1000157	Not Available	19422	Open in IMG/M
3300020731\|Ga0214170_1014780	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1437	Open in IMG/M
3300020731\|Ga0214170_1020938	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1124	Open in IMG/M
3300020731\|Ga0214170_1039522	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	723	Open in IMG/M
3300020733\|Ga0214172_1003303	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4116	Open in IMG/M
3300020733\|Ga0214172_1004904	All Organisms → Viruses → Predicted Viral	3081	Open in IMG/M
3300020733\|Ga0214172_1012387	Not Available	1567	Open in IMG/M
3300021115\|Ga0214174_105265	Not Available	1123	Open in IMG/M
3300021121\|Ga0214173_101208	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3456	Open in IMG/M
3300021121\|Ga0214173_120793	Not Available	645	Open in IMG/M
3300021131\|Ga0214206_1000793	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8092	Open in IMG/M
3300021131\|Ga0214206_1002882	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3435	Open in IMG/M
3300021131\|Ga0214206_1004883	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2334	Open in IMG/M
3300021134\|Ga0214171_1042029	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C429	603	Open in IMG/M
3300021138\|Ga0214164_1066151	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	742	Open in IMG/M
3300022555\|Ga0212088_10012132	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	13228	Open in IMG/M
3300022555\|Ga0212088_10134418	Not Available	2140	Open in IMG/M
3300025162\|Ga0209083_1014862	All Organisms → cellular organisms → Bacteria	4197	Open in IMG/M
3300025316\|Ga0209697_10453383	Not Available	604	Open in IMG/M
3300025316\|Ga0209697_10472108	Not Available	585	Open in IMG/M
3300025339\|Ga0208502_1022125	Not Available	542	Open in IMG/M
3300025358\|Ga0208504_1000692	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7931	Open in IMG/M
3300025372\|Ga0207957_1037215	Not Available	524	Open in IMG/M
3300025379\|Ga0208738_1000811	Not Available	7690	Open in IMG/M
3300025381\|Ga0208871_1014851	Not Available	1228	Open in IMG/M
3300025396\|Ga0208874_1050350	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	582	Open in IMG/M
3300025401\|Ga0207955_1007534	Not Available	2308	Open in IMG/M
3300025410\|Ga0208875_1041738	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	733	Open in IMG/M
3300025411\|Ga0208865_1029668	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	931	Open in IMG/M
3300025413\|Ga0208614_1065859	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	525	Open in IMG/M
3300025423\|Ga0208746_1030435	Not Available	917	Open in IMG/M
3300025723\|Ga0208741_10177947	Not Available	509	Open in IMG/M
3300025781\|Ga0208386_1007306	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1957	Open in IMG/M
3300025781\|Ga0208386_1054887	Not Available	532	Open in IMG/M
3300025782\|Ga0208867_1000142	Not Available	23381	Open in IMG/M
3300025783\|Ga0208258_1041441	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	654	Open in IMG/M
3300027896\|Ga0209777_10898943	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	614	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	86.92%
Lake	Environmental → Aquatic → Freshwater → Lake	13.08%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	56.07%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	22.43%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	13.08%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	4.67%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.74%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	42.06%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	22.43%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	14.02%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	5.61%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.61%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	4.67%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.80%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.87%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300000203	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300000439	Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002098	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B7 metagenome	Environmental	Open in IMG/M
3300002301	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI co-culture FSW-F8	Environmental	Open in IMG/M
3300002307	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-C2 co-culture F-D7	Environmental	Open in IMG/M
3300002933	Combined Assembly of freshwater hypolimnion microbial communities from Trout Bog Lake, Wisconsin, USA	Environmental	Open in IMG/M
3300003783	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08	Environmental	Open in IMG/M
3300003809	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH03Jun09	Environmental	Open in IMG/M
3300003813	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09	Environmental	Open in IMG/M
3300003815	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07	Environmental	Open in IMG/M
3300003823	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Aug09	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300004686	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (version 2)	Environmental	Open in IMG/M
3300004692	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (version 2)	Environmental	Open in IMG/M
3300004694	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (version 2)	Environmental	Open in IMG/M
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental	Open in IMG/M
3300004774	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006104	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09.1	Environmental	Open in IMG/M
3300006105	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE07Jul09	Environmental	Open in IMG/M
3300006112	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08	Environmental	Open in IMG/M
3300006114	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug09	Environmental	Open in IMG/M
3300006116	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE12Aug09	Environmental	Open in IMG/M
3300006118	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul07	Environmental	Open in IMG/M
3300006120	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH25Aug08	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300020686	Freshwater microbial communities from Trout Bog Lake, WI - 12AUG2008 epilimnion	Environmental	Open in IMG/M
3300020716	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnion	Environmental	Open in IMG/M
3300020717	Freshwater microbial communities from Trout Bog Lake, WI - 15JUN2009 hypolimnion	Environmental	Open in IMG/M
3300020726	Freshwater microbial communities from Trout Bog Lake, WI - 31JUL2007 hypolimnion	Environmental	Open in IMG/M
3300020727	Freshwater microbial communities from Trout Bog Lake, WI - 29MAY2009 hypolimnion	Environmental	Open in IMG/M
3300020731	Freshwater microbial communities from Trout Bog Lake, WI - 27JUN2007 epilimnion	Environmental	Open in IMG/M
3300020733	Freshwater microbial communities from Trout Bog Lake, WI - 12JUL2007 epilimnion	Environmental	Open in IMG/M
3300021115	Freshwater microbial communities from Trout Bog Lake, WI - 31JUL2007 epilimnion	Environmental	Open in IMG/M
3300021121	Freshwater microbial communities from Trout Bog Lake, WI - 25JUL2007 epilimnion	Environmental	Open in IMG/M
3300021131	Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 epilimnion	Environmental	Open in IMG/M
3300021134	Freshwater microbial communities from Trout Bog Lake, WI - 02JUL2007 epilimnion	Environmental	Open in IMG/M
3300021138	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300025162	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG (SPAdes)	Environmental	Open in IMG/M
3300025316	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG (SPAdes)	Environmental	Open in IMG/M
3300025339	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025358	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025372	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025381	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025396	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025401	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025410	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH25Aug08 (SPAdes)	Environmental	Open in IMG/M
3300025411	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025413	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025423	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025723	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE03Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025781	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH16Oct07 (SPAdes)	Environmental	Open in IMG/M
3300025782	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE05Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025783	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Jun09 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009E_0155492	3300000176	Freshwater	MRKPWVKSKEITLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIKWRD*
TB18AUG2009E_0076193	3300000203	Freshwater	MKKPWVRPKELTLEDLAWLMFEKTFLEAQEFAYELGYEIVIRWDK*
TBL_comb48_EPIDRAFT_100235924	3300000439	Freshwater	MKFKPWVRPKELTLEDLAWAMFEKVTFLEAQEFAYELGYEIVIRWDK*
TBL_comb48_EPIDRAFT_10343693	3300000439	Freshwater	MRKPWVRPKEITLEDLAWLMFEKTTFLEAQEFAYXLGXEXVIXWXE*
JGI24028J26656_10033394	3300002091	Lentic	MKKSKKLKFXELTLEDLAWLMFEKXTFLEAQEFAYELGYEIVIKWRD*
JGI24028J26656_10055852	3300002091	Lentic	MRKPWVKPKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVISWKK*
JGI24028J26656_10185732	3300002091	Lentic	MKRKPWIKPKELSLEDLAWAMFEKITFLEAQEFAYELGYEIVIRWDK*
JGI24218J26658_10060684	3300002092	Lentic	MRKPWVKPKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWKK*
JGI24218J26658_10062865	3300002092	Lentic	MKKSKKLKFTELTLEDLAWLMFEKTTFLEAQEFAYELGYEIVIKWRD*
JGI24218J26658_10241402	3300002092	Lentic	KEMTLEHLAWLMFEKVTFLEAQEFAYKLGYEIVIRWKDER*
JGI24218J26658_10376292	3300002092	Lentic	TLEHLAWLMFEKVTFLEAQEFAYKLGYEIVIRWKDER*
JGI24218J26658_10378711	3300002092	Lentic	MMKKTRIKPKEMTLEHLAWLMFEKVTFLEAQEFAYKLGYEIV
JGI24219J26650_10065715	3300002098	Lentic	MKKSKKLKFVELTLEDLAWLMFEKITFLEAQEFAYELGYEIVIKWRD*
JGI24219J26650_10301973	3300002098	Lentic	MMKKTRIKPKEMTLEHLAWLMFEKVTFLEAQEFAYKLGYEIVIRWKDER*
JGI24219J26650_10414992	3300002098	Lentic	MRKPWVKSKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWNK*
JGI24891J29808_10045532	3300002301	Lentic	MRKPWVKPKKLSLEDLAWLMFEKTTFLEAQEFAYELGYEIVISWXK*
JGI24891J29808_10174272	3300002301	Lentic	MRKPWVKPKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWIK*
JGI24890J29729_10183044	3300002307	Lentic	MRKPWVKSKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVISWNK*
JGI24890J29729_10281182	3300002307	Lentic	MVGLMKKPKELTLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE*
G310J44882_100085251	3300002933	Freshwater	KPWVRPKELTLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWDK*
G310J44882_100248595	3300002933	Freshwater	MKKPWVKPKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWDK*
Ga0007850_100008220	3300003783	Freshwater	MAGLMRKPWVKPKELTLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE*
Ga0007869_10275563	3300003809	Freshwater	VSSVVGLMRKPWVRPKELTLEDLAWAMFEKVTFLEAQEFAYELGYEIVIRWDK*
Ga0007879_10124752	3300003813	Freshwater	MRKPWVKPKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIR
Ga0007856_10038263	3300003815	Freshwater	MKAKPWVRPKELTLEDLAWAMFEKVTFLEAQEFAYELGYEIVIRWDK*
Ga0007856_10061422	3300003815	Freshwater	MKRKPWVRPKELTLEDLAWAMFEKVTFLEAQEFAYELGYEIVIRWDK*
Ga0007856_10085181	3300003815	Freshwater	MRKPWVRPKELTLEDLAWAMFEKVTFLEAQEFAYELGYEIVIR
Ga0007875_10144122	3300003823	Freshwater	MRKPKELTLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE*
Ga0031655_100126051	3300003852	Freshwater Lake Sediment	GKSNCSVSSVVGLMKKPWVKPKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWDK*
Ga0031655_103851721	3300003852	Freshwater Lake Sediment	SNCSVSSVVGLMKKPWVKPKELSLEDLAWAMFEKVTFLEAQEFAYELGYEIVIRWDK*
Ga0065173_10732581	3300004686	Freshwater	MKKSKKLKFEELTLEDLAWLMFEKTTFLEAQEFAYELGYEIVIKWRD*
Ga0065171_10332281	3300004692	Freshwater	MRKPWVRPKELTLEDLAWAMFEKVTFLEAQEFAYELGYEIVIRWDK
Ga0065170_10423962	3300004694	Freshwater	MRKPWVKSKEITLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE*
Ga0007804_10364773	3300004770	Freshwater	MAGLMKKPKELTLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE*
Ga0007804_10450383	3300004770	Freshwater	MKRKSWVRPKELTLEELAWAMFEKVTFLEAQEFAYELGYEIVIRWDK*
Ga0007804_10500653	3300004770	Freshwater	MRKPWVRPKEITLEDLAWLMFEKTTFLEAQEFAYELGYEIVIKWRD*
Ga0007804_10746062	3300004770	Freshwater	MRKPWVKPKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWDK*
Ga0007804_11854321	3300004770	Freshwater	MKKPKELTLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE*
Ga0007794_101934341	3300004774	Freshwater	MKEKSWVRPKELTLEDLAWAMFEKVTFLEAQEFAYELGYEIVIRWDK*
Ga0007809_100977792	3300004807	Freshwater	MRKPWVRPKELTLEDLAWLMFEKVTFLEAQEFAYELGYEIVIRWDK*
Ga0007876_11578721	3300006071	Freshwater	LTLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE*
Ga0007881_11687681	3300006072	Freshwater	MKKPKELTLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWK
Ga0007881_11724152	3300006072	Freshwater	MKRKPWARPKELTLEDLAWAMFEKVTFLEAQEFAYELGYEIVIRWDK*
Ga0007882_101529592	3300006104	Freshwater	VVGLMRKPWVKSKEITLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE*
Ga0007819_10259712	3300006105	Freshwater	VVGLMRKPKELTLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE*
Ga0007819_11063151	3300006105	Freshwater	KPWVKPKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWDK*
Ga0007857_10175744	3300006112	Freshwater	KPKELTLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE*
Ga0007815_10065887	3300006114	Freshwater	MKRKPWARPKELTLEDLAWAMFEKVTFLEAQEFAYELGYEIVIRW
Ga0007807_10626683	3300006116	Freshwater	MKRKSWVRPKELTLEDLAWAMFEKVTFLEAQEFAYELGYEIVIRWDK*
Ga0007859_10144122	3300006118	Freshwater	MRKPWVKPKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWNK*
Ga0007859_10214122	3300006118	Freshwater	MRKPWVRPKELTLEDLAWAMFEKVTFLEAQEFAYELGYEIVIRWDK*
Ga0007867_10864731	3300006120	Freshwater	ELTLEDLAWLMFEKTTFLEAQEFAYELGYEIVIKWRD*
Ga0007867_10971712	3300006120	Freshwater	ITLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE*
Ga0073936_102202654	3300009175	Freshwater Lake Hypolimnion	GKSHRSVSSVVGLMRKPWVKPKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWIK*
Ga0073936_104965962	3300009175	Freshwater Lake Hypolimnion	MKKPWIKSKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWIK*
Ga0114951_100074022	3300009502	Freshwater	MKRKPWVKPKELSLEDLAWAMFEKTTFLEAQEFAYELGYEIVIRWDK*
Ga0114951_103744972	3300009502	Freshwater	MKKPWVKPKELSLEDLAWLMFEKTTLLEAQEFAYELGYEIVIRWNK*
Ga0114951_104332502	3300009502	Freshwater	MKKSKKLKVIEFTLEDLAWLMFEKITFLEAQEFAYELGYEIVIRWRE*
Ga0164296_11911192	3300013093	Freshwater	MRKPWVRPKELTLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWDK*
Ga0164296_12369051	3300013093	Freshwater	MKKPWVKPKELSLEDLAWAMFEKVTFLEAQEFAYELGYEIVIRWDK*
Ga0136642_10268361	3300013285	Freshwater	MKKPKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWRD*
Ga0136642_10964232	3300013285	Freshwater	MKKTKELTLEDLAWLMFEKTSFLDVQEFAYELGCEIVIRWKE*
Ga0214194_1042882	3300020686	Freshwater	MRKPWVKSKEITLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE
Ga0214194_1127202	3300020686	Freshwater	MRKPWVKPKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWDK
Ga0214194_1159921	3300020686	Freshwater	MKKPKELTLEDLAWLMFEKTTFLEAQEFAYDLGYEI
Ga0214207_10025435	3300020716	Freshwater	MRKPWVRPKEITLEDLAWLMFEKTTFLEAQEFAYELGYEIVIKWRD
Ga0214207_10042443	3300020716	Freshwater	MKKPWVRPKELTLEDLAWLMFEKVTFLEAQEFAYELGYEIVIRWDK
Ga0214207_10309832	3300020716	Freshwater	MKKPKELTLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE
Ga0214248_10249233	3300020717	Freshwater	MKAKPWVRPKELTLEDLAWAMFEKVTFLEAQEFAYELGYEIVIRWDK
Ga0214220_10340121	3300020726	Freshwater	RSVSSVVGLMKKPWVKPKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWDK
Ga0214246_10001577	3300020727	Freshwater	MRKPWVKSKEITLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIKWRD
Ga0214170_10147801	3300020731	Freshwater	GLMRKPKELTLEDLAWLMFEKTTFLEAQEFAYELGYEIVIKWRD
Ga0214170_10209382	3300020731	Freshwater	VVGLMRKPWVRPKEITLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE
Ga0214170_10395222	3300020731	Freshwater	GLMRKPKELTLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE
Ga0214172_100330310	3300020733	Freshwater	MKKPWVKPKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWDK
Ga0214172_10049049	3300020733	Freshwater	MRKPKELTLEDLAWLMFEKTTFLEAQEFAYELGYEIVIKWRD
Ga0214172_10123873	3300020733	Freshwater	MRKPWVRPKEITLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE
Ga0214174_1052652	3300021115	Freshwater	MRKPKELTLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE
Ga0214173_1012089	3300021121	Freshwater	MRKPWVKSKEITLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWKE
Ga0214173_1207931	3300021121	Freshwater	MKKPWVRPKELTLEDLAWLMFEKTTFLEAQEFAYELGYEIVIR
Ga0214206_100079311	3300021131	Freshwater	MARSKSWVRPKELTLEDLAWAMFEKVTFLEAQEFAYELGYEIVIKWAE
Ga0214206_10028829	3300021131	Freshwater	KTMTLEELAYLMFEKVTFLEAQEFAYELGYEIVIRWKE
Ga0214206_10048832	3300021131	Freshwater	MKKPKELTLEDLAWIMFEKTTFLEAQEFAYDLGYEIVIRWKE
Ga0214171_10420292	3300021134	Freshwater	MKKFWVKPKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWDK
Ga0214164_10661512	3300021138	Freshwater	MAGLMKKPKELTLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE
Ga0212088_1001213214	3300022555	Freshwater Lake Hypolimnion	MKRKPWIKPKELSLEDLAWAMFEKITFLEAQEFAYELGYEIVIRWDK
Ga0212088_101344185	3300022555	Freshwater Lake Hypolimnion	MRKPWVKPKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWNK
Ga0209083_10148624	3300025162	Freshwater	MRKPWVKPKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVISWNK
Ga0209697_104533831	3300025316	Freshwater Lake Hypolimnion	MRKPWVKPKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWIK
Ga0209697_104721082	3300025316	Freshwater Lake Hypolimnion	MKKPWIKSKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWIK
Ga0208502_10221252	3300025339	Freshwater	MKFKPWVRPKELTLEDLAWAMFEKVTFLEAQEFAYELGYEIVIRWDK
Ga0208504_10006925	3300025358	Freshwater	MRKPWVKPKELTLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE
Ga0207957_10372152	3300025372	Freshwater	MKRKPWVRPKELTLEDLAWAMFEKVTFLEAQEFAYELGYEIVIRWDK
Ga0208738_10008115	3300025379	Freshwater	MKRKPWARPKELTLEDLAWAMFEKVTFLEAQEFAYELGYEIVIRWDK
Ga0208871_10148511	3300025381	Freshwater	MKFKPWVRPKELTLEDLAWAMFEKVTFLEAQEFAYELGYEIVIR
Ga0208874_10503502	3300025396	Freshwater	MKKSKKLKFEELTLEDLAWLMFEKTTFLEAQEFAYELGYEIVIKWRD
Ga0207955_10075348	3300025401	Freshwater	SVVGLMRKPWVRPKELTLEDLAWAMFEKVTFLEAQEFAYELGYEIVIRWDK
Ga0208875_10417381	3300025410	Freshwater	LMRKPWVKSKEITLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE
Ga0208865_10296681	3300025411	Freshwater	KELTLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE
Ga0208614_10658593	3300025413	Freshwater	MRKPWVKSKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWDK
Ga0208746_10304352	3300025423	Freshwater	MKRKSWVRPKELTLEELAWAMFEKVTFLEAQEFAYELGYEIVIRWDK
Ga0208741_101779471	3300025723	Freshwater	MRKPKELTLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWK
Ga0208386_10073066	3300025781	Freshwater	NCSIPSVVGLMRKPWVRPKELTLEDLAWAMFEKVTFLEAQEFAYELGYEIVIRWDK
Ga0208386_10548871	3300025781	Freshwater	MAGLMKKPKELTLEDLAWLMFEKTTFLEAQEFAYDLG
Ga0208867_100014230	3300025782	Freshwater	MAGLMRKPWVKPKELTLEDLAWLMFEKTTFLEAQEFAYDLGYEIVIRWKE
Ga0208258_10414414	3300025783	Freshwater	PWVKPKELSLEDLAWLMFEKTTFLEAQEFAYELGYEIVIRWDK
Ga0209777_108989432	3300027896	Freshwater Lake Sediment	MARLMKKPWIKPKELSLEDLAWLMFEKTTFLEAQEFAYELGCEIVIRWNK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091214

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences