Metagenome Family F091308

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091308
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	61 residues
Representative Sequence	MRYEQAKPLVNTLMEIAVLNHASPSLLREKIYKALDEFLPDMDEGCRERGCIAVDDFKEKKA
Number of Associated Samples	83
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	82.41 %
% of genes near scaffold ends (potentially truncated)	30.84 %
% of genes from short scaffolds (< 2000 bps)	74.77 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Predicted Viral (41.121 % of family members)
NCBI Taxonomy ID	10239 (predicted)
Taxonomy	All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (19.626 % of family members)
Environment Ontology (ENVO)	Unclassified (57.009 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (61.682 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.67% β-sheet: 0.00% Coil/Unstructured: 53.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF11753	DUF3310	3.74
PF01612	DNA_pol_A_exo1	3.74
PF03118	RNA_pol_A_CTD	2.80
PF08774	VRR_NUC	1.87
PF02195	ParBc	1.87
PF08291	Peptidase_M15_3	0.93
PF01139	RtcB	0.93
PF11195	DUF2829	0.93
PF00196	GerE	0.93
PF01653	DNA_ligase_aden	0.93
PF04851	ResIII	0.93
PF00847	AP2	0.93
PF04448	DUF551	0.93
PF13203	DUF2201_N	0.93
PF13392	HNH_3	0.93
PF01022	HTH_5	0.93
PF06048	DUF927	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0202	DNA-directed RNA polymerase, alpha subunit/40 kD subunit	Transcription [K]	2.80
COG0272	NAD-dependent DNA ligase	Replication, recombination and repair [L]	0.93
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	0.93
COG5519	Predicted ATPase domain of Cch-like helicases, DUF927 family	General function prediction only [R]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.57 %
Unclassified	root	N/A	22.43 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	74.77 %
Unclassified	root	N/A	22.43 %
cellular organisms	root	All Organisms → cellular organisms	2.80 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	41.12 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	31.78 %
Unclassified	root	N/A	22.43 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.80 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	41.12 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	31.78 %
Unclassified	root	N/A	22.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	41.12 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	31.78 %
Unclassified	root	N/A	22.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	41.12 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	31.78 %
Unclassified	root	N/A	22.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	41.12 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	31.78 %
Unclassified	root	N/A	22.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	41.12 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	31.78 %
Unclassified	root	N/A	22.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001847\|RCM41_1009386	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6387	Open in IMG/M
3300002091\|JGI24028J26656_1002592	All Organisms → Viruses → Predicted Viral	3282	Open in IMG/M
3300002301\|JGI24891J29808_1005692	All Organisms → Viruses → Predicted Viral	1314	Open in IMG/M
3300002307\|JGI24890J29729_1038680	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	951	Open in IMG/M
3300003375\|JGI26470J50227_1001194	All Organisms → Viruses	9400	Open in IMG/M
3300003375\|JGI26470J50227_1039116	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	890	Open in IMG/M
3300003375\|JGI26470J50227_1076347	Not Available	525	Open in IMG/M
3300003787\|Ga0007811_1005140	All Organisms → Viruses → Predicted Viral	1460	Open in IMG/M
3300003814\|Ga0007877_1005904	Not Available	1696	Open in IMG/M
3300003814\|Ga0007877_1025001	Not Available	643	Open in IMG/M
3300004096\|Ga0066177_10136279	Not Available	969	Open in IMG/M
3300004112\|Ga0065166_10036167	All Organisms → Viruses → Predicted Viral	1569	Open in IMG/M
3300004282\|Ga0066599_100529382	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	772	Open in IMG/M
3300004481\|Ga0069718_14574387	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1110	Open in IMG/M
3300004481\|Ga0069718_14725172	All Organisms → Viruses → Predicted Viral	1167	Open in IMG/M
3300004481\|Ga0069718_16292829	All Organisms → Viruses → Predicted Viral	2068	Open in IMG/M
3300004693\|Ga0065167_1010234	All Organisms → Viruses → Predicted Viral	1432	Open in IMG/M
3300004770\|Ga0007804_1128758	Not Available	638	Open in IMG/M
3300004807\|Ga0007809_10038410	All Organisms → Viruses → Predicted Viral	1599	Open in IMG/M
3300006071\|Ga0007876_1106035	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	723	Open in IMG/M
3300006071\|Ga0007876_1138457	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	613	Open in IMG/M
3300006115\|Ga0007816_1090130	Not Available	676	Open in IMG/M
3300006118\|Ga0007859_1021443	All Organisms → Viruses → Predicted Viral	1420	Open in IMG/M
3300006119\|Ga0007866_1032837	All Organisms → Viruses → Predicted Viral	1025	Open in IMG/M
3300006119\|Ga0007866_1059166	Not Available	719	Open in IMG/M
3300006128\|Ga0007828_1003796	All Organisms → cellular organisms → Bacteria	3329	Open in IMG/M
3300008107\|Ga0114340_1019575	Not Available	6229	Open in IMG/M
3300008107\|Ga0114340_1115495	All Organisms → Viruses → Predicted Viral	1048	Open in IMG/M
3300008110\|Ga0114343_1031574	All Organisms → Viruses → Predicted Viral	2866	Open in IMG/M
3300008113\|Ga0114346_1313352	Not Available	532	Open in IMG/M
3300008266\|Ga0114363_1035931	All Organisms → Viruses → Predicted Viral	2055	Open in IMG/M
3300008448\|Ga0114876_1111305	All Organisms → Viruses → Predicted Viral	1069	Open in IMG/M
3300008448\|Ga0114876_1251536	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	547	Open in IMG/M
3300009009\|Ga0105105_10052619	All Organisms → Viruses → Predicted Viral	1847	Open in IMG/M
3300009075\|Ga0105090_10594408	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	672	Open in IMG/M
3300009082\|Ga0105099_10189259	All Organisms → Viruses → Predicted Viral	1174	Open in IMG/M
3300009082\|Ga0105099_10457929	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	768	Open in IMG/M
3300009082\|Ga0105099_10814411	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	585	Open in IMG/M
3300009082\|Ga0105099_11123147	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	504	Open in IMG/M
3300009152\|Ga0114980_10181590	All Organisms → Viruses → Predicted Viral	1240	Open in IMG/M
3300009152\|Ga0114980_10839229	Not Available	510	Open in IMG/M
3300009159\|Ga0114978_10434287	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	781	Open in IMG/M
3300009165\|Ga0105102_10274675	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	865	Open in IMG/M
3300009165\|Ga0105102_10500977	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	659	Open in IMG/M
3300009168\|Ga0105104_10534313	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	662	Open in IMG/M
3300009170\|Ga0105096_10251168	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	898	Open in IMG/M
3300009180\|Ga0114979_10268370	All Organisms → Viruses → Predicted Viral	1019	Open in IMG/M
3300009184\|Ga0114976_10279356	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	898	Open in IMG/M
3300009419\|Ga0114982_1097232	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	910	Open in IMG/M
3300009502\|Ga0114951_10036661	All Organisms → cellular organisms → Bacteria → Proteobacteria	3073	Open in IMG/M
3300009504\|Ga0114946_10018974	All Organisms → Viruses → Predicted Viral	4145	Open in IMG/M
3300009509\|Ga0123573_10543477	All Organisms → Viruses → Predicted Viral	1102	Open in IMG/M
3300010885\|Ga0133913_10249222	All Organisms → Viruses → Predicted Viral	4716	Open in IMG/M
3300010885\|Ga0133913_12425158	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1282	Open in IMG/M
3300012664\|Ga0157497_1000689	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6611	Open in IMG/M
3300013004\|Ga0164293_10101614	All Organisms → Viruses → Predicted Viral	2206	Open in IMG/M
3300015050\|Ga0181338_1009216	All Organisms → Viruses → Predicted Viral	1637	Open in IMG/M
3300017722\|Ga0181347_1033322	All Organisms → Viruses → Predicted Viral	1599	Open in IMG/M
3300017754\|Ga0181344_1000299	All Organisms → Viruses	19954	Open in IMG/M
3300017754\|Ga0181344_1068820	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1045	Open in IMG/M
3300017754\|Ga0181344_1206828	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	550	Open in IMG/M
3300019784\|Ga0181359_1076973	All Organisms → Viruses → Predicted Viral	1256	Open in IMG/M
3300020048\|Ga0207193_1246513	All Organisms → Viruses → Predicted Viral	1354	Open in IMG/M
3300020151\|Ga0211736_10967682	All Organisms → Viruses → Predicted Viral	1626	Open in IMG/M
3300021135\|Ga0214247_1020855	All Organisms → Viruses → Predicted Viral	1173	Open in IMG/M
3300021956\|Ga0213922_1013430	All Organisms → Viruses → Predicted Viral	2211	Open in IMG/M
3300021961\|Ga0222714_10001193	Not Available	29448	Open in IMG/M
3300021961\|Ga0222714_10028896	All Organisms → Viruses → Predicted Viral	4166	Open in IMG/M
3300021961\|Ga0222714_10615361	Not Available	540	Open in IMG/M
3300021963\|Ga0222712_10175162	All Organisms → Viruses → Predicted Viral	1425	Open in IMG/M
3300021963\|Ga0222712_10472487	Not Available	747	Open in IMG/M
3300022407\|Ga0181351_1008077	All Organisms → Viruses → Predicted Viral	4183	Open in IMG/M
3300022407\|Ga0181351_1220047	Not Available	617	Open in IMG/M
3300022555\|Ga0212088_10106768	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2541	Open in IMG/M
3300025135\|Ga0209498_1241636	Not Available	636	Open in IMG/M
3300025372\|Ga0207957_1014698	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1010	Open in IMG/M
3300025379\|Ga0208738_1000065	Not Available	32899	Open in IMG/M
3300025381\|Ga0208871_1000011	Not Available	65856	Open in IMG/M
3300025436\|Ga0208103_1024435	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	831	Open in IMG/M
3300025598\|Ga0208379_1094217	Not Available	720	Open in IMG/M
3300025785\|Ga0208498_1044652	Not Available	647	Open in IMG/M
3300027693\|Ga0209704_1086606	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	883	Open in IMG/M
3300027710\|Ga0209599_10011625	All Organisms → Viruses → Predicted Viral	2667	Open in IMG/M
3300027721\|Ga0209492_1010401	All Organisms → Viruses → Predicted Viral	3103	Open in IMG/M
3300027743\|Ga0209593_10353946	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300027759\|Ga0209296_1139808	All Organisms → Viruses → Predicted Viral	1101	Open in IMG/M
3300027763\|Ga0209088_10077522	All Organisms → Viruses → Predicted Viral	1562	Open in IMG/M
3300027763\|Ga0209088_10092915	All Organisms → Viruses → Predicted Viral	1394	Open in IMG/M
3300027763\|Ga0209088_10388172	Not Available	542	Open in IMG/M
3300027792\|Ga0209287_10301005	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	615	Open in IMG/M
3300027892\|Ga0209550_10387512	Not Available	869	Open in IMG/M
3300027896\|Ga0209777_10381935	All Organisms → Viruses → Predicted Viral	1064	Open in IMG/M
3300027956\|Ga0209820_1111672	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	746	Open in IMG/M
3300027974\|Ga0209299_1132415	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	953	Open in IMG/M
3300027975\|Ga0209391_10362330	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	563	Open in IMG/M
3300029798\|Ga0239581_1129629	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	503	Open in IMG/M
3300031746\|Ga0315293_10292210	All Organisms → Viruses → Predicted Viral	1310	Open in IMG/M
3300031857\|Ga0315909_10113804	All Organisms → Viruses → Predicted Viral	2303	Open in IMG/M
3300031885\|Ga0315285_10666529	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	676	Open in IMG/M
3300033816\|Ga0334980_0196488	Not Available	811	Open in IMG/M
3300034012\|Ga0334986_0471141	Not Available	623	Open in IMG/M
3300034061\|Ga0334987_0046443	All Organisms → Viruses → Predicted Viral	3642	Open in IMG/M
3300034101\|Ga0335027_0041546	All Organisms → Viruses → Predicted Viral	3774	Open in IMG/M
3300034104\|Ga0335031_0044817	All Organisms → Viruses → Predicted Viral	3196	Open in IMG/M
3300034104\|Ga0335031_0648008	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	615	Open in IMG/M
3300034118\|Ga0335053_0716704	Not Available	561	Open in IMG/M
3300034284\|Ga0335013_0190280	All Organisms → Viruses → Predicted Viral	1368	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.13%
Terrestrial	Environmental → Terrestrial	1.87%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	92.52%
Marine	Environmental → Aquatic → Marine	4.67%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.87%
Sediment	Environmental → Aquatic → Sediment	0.93%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	35.51%
Lake	Environmental → Aquatic → Freshwater → Lake	32.71%
Sediment	Environmental → Aquatic → Freshwater → Sediment	19.63%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.67%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.87%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.93%
Pond	Environmental → Aquatic → Freshwater → Pond	0.93%
Creek	Environmental → Aquatic → Freshwater → Creek	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	32.71%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	29.91%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	19.63%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.67%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.80%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.87%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.93%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	19.63%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	14.95%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	12.15%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	10.28%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.41%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	4.67%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	2.80%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	2.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.87%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.87%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.87%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.87%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.93%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	0.93%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.93%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.93%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.93%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001847	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM41. ROCA_DNA251_0.2um_TAP-D_2a	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002301	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI co-culture FSW-F8	Environmental	Open in IMG/M
3300002307	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-C2 co-culture F-D7	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003787	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09	Environmental	Open in IMG/M
3300003814	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Jul09	Environmental	Open in IMG/M
3300004096	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300004693	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA7.5M (version 2)	Environmental	Open in IMG/M
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006115	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09	Environmental	Open in IMG/M
3300006118	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul07	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300006128	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009504	Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep Sediment	Environmental	Open in IMG/M
3300009509	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012664	Freshwater microbial communities from Zephyr Creek, Ontario, Canada - S17	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300015050	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300021135	Freshwater microbial communities from Trout Bog Lake, WI - 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300021956	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MG	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300025135	Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep Sediment (SPAdes)	Environmental	Open in IMG/M
3300025372	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025381	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025436	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA7.5M (SPAdes)	Environmental	Open in IMG/M
3300025598	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025785	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE12Aug09 (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027792	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027956	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027974	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027975	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300029798	Freshwater lake microbial communities from Alinen Mustajarvi, Finland - AM11	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
RCM41_100938615	3300001847	Marine Plankton	MKYEQAKPIVEKLLDLAILYHASPNMLRMKLYEALDEIPHLDDACFERGCMGIDNFAKEKK*
JGI24028J26656_10025923	3300002091	Lentic	MRYEQAKPLVHKLMEIAIMYHASGLLRQKIYDALDEYLPDLDEGCRERGCIAVDYFKDKNT*
JGI24891J29808_10056922	3300002301	Lentic	MRYEQAKPLVQKLMEIAVMYHASELLRQKIYDALDEYLPDLDEGCRERGCIAIDYFEEWNNECK*
JGI24890J29729_10386801	3300002307	Lentic	SHRSQIKGEEHMRYEQAKPLVQKLMEIAVMYHASELLRQKIYDALDEYLPDLDEGCRERGCIAIDYFEEWNNECK*
JGI26470J50227_10011948	3300003375	Freshwater	VRYEQAKPLLFKLVDIARLYHASQLLPVKLYEALDEYLPDMDEGCRERGCIAVDNFKETK
JGI26470J50227_10391162	3300003375	Freshwater	MRYEQARPLVNTLMEIAVLXHASPSLLREKIYKALDEFLPDMDDGCRERGCIAVDDFKEKKV*
JGI26470J50227_10763471	3300003375	Freshwater	MRYEQAKPLVKKLMDIAIMYHASQLLQQKIYNALDEYLPDLDEGCRERGCIAVDNFKEKNT*
Ga0007811_10051402	3300003787	Freshwater	MRYEQARPLVNTLMEIAVLNHASPSLLREKIYKALDEFLPDMDEGCRERGCIAVDDFKEKKA*
Ga0007877_10059047	3300003814	Freshwater	MRYEQARPLVNTLMEIAVLHHASPSLLREKIYKALDEFLPDMDEGCRERGCIA
Ga0007877_10250012	3300003814	Freshwater	MRYEQARPLVNTLMEIAVLNHASPSLLREKIYKALDEFLPDMDEGCRERGCIA
Ga0066177_101362794	3300004096	Freshwater Lake	MGDAMKYQQAKPLIEKLKVIAVLYYASSMLPMKIYEALDEYLPDMDEGCRERGCIAVDNFKERNT*
Ga0065166_100361677	3300004112	Freshwater Lake	MKYSQAKPLVEQLMSLAVLYHASPTMLREKIYNALDEFLPDLDEGCRERGCIAVDDFKEKNT*
Ga0066599_1005293821	3300004282	Freshwater	MRYQQAKPLVEKLVSISVLFHGSPSLLRKKLYEALDEYLPDLDEGCRERGCIAIDDR
Ga0069718_145743873	3300004481	Sediment	MRYEQAKPLVEKLMDIAVLYHGAPSMLREKVYNALDEFLPTLDEGCRERGCIAIDDFKEKP*
Ga0069718_147251721	3300004481	Sediment	VRYEQAKPLIEKLKVIAVLYHASQLLPMKIYEALDEYLPDMDEACRERGCIAVDNF
Ga0069718_162928296	3300004481	Sediment	MRYSQAKPLVEKLIDIAVLYHASPTMLREKIYNALDEFLPDLDEGCRERGCIAVDHFKPQEKT*
Ga0065167_10102344	3300004693	Freshwater	MRYEQARPLVEKLMDIAVLYHGAPSVLRDKIYTALDEFLPDLDEGCRERGCIAVDHFKKEKT*
Ga0007804_11287583	3300004770	Freshwater	MRYAQARPLVNTLMEIAVLHHASPSLLREKIYKALDEFLPDMDEGCRERGC
Ga0007809_100384102	3300004807	Freshwater	MRYEQAKPLVNTLMEIAVLNHASPSLLREKIYKALDEFLPDMDEGCRERGCIAVDDFKEKKA*
Ga0007876_11060351	3300006071	Freshwater	MRYEQARPLVNTLMEIAVLNHASPSLLREKIYKALDEFLPDMDEGCRERGCIAVDDFKE
Ga0007876_11384573	3300006071	Freshwater	PLVNTLMEIAVLHHASPSLLREKIYKALDEFLPDMDEGCRERGCIAVDDFKEKV*
Ga0007816_10901301	3300006115	Freshwater	MRYEQARPLVNTLMEIAVLNHASPSLLREKIYKALDEFLPDMDEGCRERGCIAVD
Ga0007859_10214432	3300006118	Freshwater	MRYEQARPLVNTLMEIAVLNHVSPSLLREKIYKALDEFLPDMDEGCRERGCIAVDDFKEKKA*
Ga0007866_10328372	3300006119	Freshwater	MRYEQARPLVNTLMEIAVLNHASPSLLREKIYKALDEFLPDMDDGCRERGCIAVDDFKEKKA*
Ga0007866_10591664	3300006119	Freshwater	MRYEQARPLVNTLMDIAVLHHASPSLLREKIYKALDEFLPDMDEGCRERGCIAVD
Ga0007828_100379611	3300006128	Freshwater	GEGMRYEQARPLVNTLMEIAVLNHASPSLLREKIYKALDEFLPDMDEGCRERGCIAVDDFKEKV*
Ga0114340_10195757	3300008107	Freshwater, Plankton	MKYEQAKPLVEKLMDISVLYHAAPSLLREKIYNALDEFLPDLDEGCRERGCIAVDDFKEKL*
Ga0114340_11154954	3300008107	Freshwater, Plankton	MRYEQAKPLVEKIKVIAVLYHASQLLPMKIYEALDEYLPDMDEACRERGCIAVDN
Ga0114343_10315745	3300008110	Freshwater, Plankton	MRYEQAKPLVEKLMDIAVLYHGAPSMLREKIYNALDEFLPTLDEGCRERGCIAVDDFKDRA*
Ga0114346_13133521	3300008113	Freshwater, Plankton	MRYEQAKPLVEKIKVIAVLYHASQLLPMKIYEALDEFLPDMDEGCRERGCIAVDNFAGEKDGAI*
Ga0114363_10359313	3300008266	Freshwater, Plankton	MRYEQAKPLVEKLKVIAVLYHASQLLPLKIYEALDEFLPDMDEACRERGCIAVDNFAGEKDGSI*
Ga0114876_11113054	3300008448	Freshwater Lake	MRYEQAKPLVEKLMDIAVLYHGAPSMLREKIYNALDEFLPDLDEGCRERGCIAIDDFKDRA*
Ga0114876_12515361	3300008448	Freshwater Lake	EMRYEQAKPLVEKLMDIAVLYHGAPSMLREKVYNALDEFLPTLDEGCRERGCIAIDDFKEKP*
Ga0105105_100526193	3300009009	Freshwater Sediment	MRYEQAKPLVETLMNLAVLYHGAPSMLRHKLYEALDEYLPDLDEGCRTRGCIAVDHFKEKA*
Ga0105090_105944084	3300009075	Freshwater Sediment	MRYEQAKPLVETLMNISVLFHGSPSMLRHKLYEALDEYLPDLDEGCRERGCIAVDHFKEQP*
Ga0105099_101892592	3300009082	Freshwater Sediment	MRYEQAKPLVEKLMNISVLFHGSPSLLRKKLYEALDEFLPDLDEGCRARGCIAIDHFKKDTQ*
Ga0105099_104579292	3300009082	Freshwater Sediment	MRYEQAKPLVEKLMNLAVLYHGAPSMLRHKLYEALDEYLPDLDEGCRTRGCIAVDDFKEKP*
Ga0105099_108144113	3300009082	Freshwater Sediment	MRYEQAKPLVETLMNISVLYHGAPSILRKKLYEALDEYLPDLDEGCRTRGCIAVDHFKEQP*
Ga0105099_111231472	3300009082	Freshwater Sediment	MRYEQAKPLVEKLMNLAVLYHGAPSMLRHKLYEALDEYLPDLDEGCRTRGCIAVDNFKEKP*
Ga0114980_101815905	3300009152	Freshwater Lake	MKYEQAKPLIEKLKVIAVLYYASSMLPMKIYEALDEYLPDMDEGCRERGCIAVDNFKEKNHGSV*
Ga0114980_108392291	3300009152	Freshwater Lake	RRRTVRYEQAKPLIEKLKVIAVLYHASQLLPMKIYEALDEYLPDMDEGCRERGCIAVDKFKETK*
Ga0114978_104342872	3300009159	Freshwater Lake	MKYEQAKPLLFKLVDIARLYHASQLLPVKLYEALDEYLPDMDEGCRERGCIAVDNFKEKK
Ga0105102_102746751	3300009165	Freshwater Sediment	KAGEDCFGEAMRYEQAKPLVETLMNISVLFHGSPSMLRHKLYEALDEYLPDLDEGCRERGCIAVDHFKEQP*
Ga0105102_105009773	3300009165	Freshwater Sediment	MRYEQAKPLVEKLINISVLYHGAPSMLRHKLYEALDEYLPDLDEGCRTRGCIAVDHFKEKA*
Ga0105104_105343133	3300009168	Freshwater Sediment	MRYQQARPLVEKLVSISVLFHGSPSLLRKKLYEALDEHLPDLDEGCSERGCIAIDDFKEKP*
Ga0105096_102511681	3300009170	Freshwater Sediment	MRYEQAKPLVEKLMNISVLFHGSPSLLRKKLYEALDEYLPDLDEGCRERGCIAVDHFKDNLDNMS
Ga0114979_102683705	3300009180	Freshwater Lake	CDLSDFMGDAMKYQQAKPLIEKLKHIAVLYHAAPTMLREKIYEALDEYLPDMDEGCRERGCIAVDNFKEKNT*
Ga0114976_102793561	3300009184	Freshwater Lake	KSSRRRTVRYEQAKPLIEKLKVIAVLYHASAMLPMKIYEALDEYLPDMDEGCRERGCIAVDKFKETK*
Ga0114982_10972322	3300009419	Deep Subsurface	MRYTQAKPLVETLMNIAVLYHASPTLLREKIYNALDEFLPDLDEGCRERGCIAVDHFKDKT*
Ga0114951_100366618	3300009502	Freshwater	MRYEQARPLVNTLMEIAVLNHASPSLLREKIYKALDEFLPDMDEGCRERGCIAVDDFKEKAVLGGEKKQEKA*
Ga0114946_100189746	3300009504	Sediment	MRYEQAKPLLDTLIDLAYLYHGNKDLMRQRMYAALDDYLPDMDEGCRTRGCIAVDDFKEKKDE*
Ga0123573_105434772	3300009509	Mangrove Sediment	MRYEQAKPLVDRLVDVAILFHMSPSMLRKKIYEALDDYLPDLDEGCRERGCIAVDDFAPKKEK*
Ga0133913_1024922214	3300010885	Freshwater Lake	MGDAMKYQQAKPLIEKLKHIAVLYHAAPTMLREKIYEALDEYLPDMDEGCRERGCIAVDNFKEKNT*
Ga0133913_124251581	3300010885	Freshwater Lake	GEHMRYEQAKPLVQKLMEIAIMYHASSLLREKIYNALDEFLPDLDEGCRERGCIAVDDFKEKT*
Ga0157497_10006898	3300012664	Freshwater	VRYTQAKPLVEKLMNIAVLYHASPTLLREKIYNALDEFLPDLDEGCRERGCIAVDHFKEKP*
Ga0164293_101016147	3300013004	Freshwater	MKYQQAKPLVEKLTDLAILYHASPSMLRLKIYMALDEYIPDMDEGCRTRGCIAVDDFAPKEEK*
Ga0181338_10092162	3300015050	Freshwater Lake	VRYEQAKPLIEKLKVIAVLYYASSMLPMKIYEALDEYLPDMDEGCRERGCIAVDNFKERNT*
Ga0181347_10333223	3300017722	Freshwater Lake	VRYEQAKPLIEKLKVIAVLYYASSMLPMKIYEALDEYLPDMDEGCRERGCIAVDKFKEKN
Ga0181344_100029913	3300017754	Freshwater Lake	MKYSQAKPLVEQLMSLAVLYHASPTMLREKIYNALDEFLPDLDEGCRERGCIAVDDFKEKNT
Ga0181344_10688204	3300017754	Freshwater Lake	MRYEQAKPLVEQLTDLAILYHASPSVLRFKLYTALDEYLPDMDEGCRTRGCIAVDDFSKEKK
Ga0181344_12068283	3300017754	Freshwater Lake	MRYAQAKPLVEKLMSIAVLYSGSPTLLRKKIHDAIDEYIPDLDEGCRERGCIAIDHFKEK
Ga0181359_10769731	3300019784	Freshwater Lake	VRYEQAKPLIEKLKVIAVLYYASSMLPMKIYEALDEYLPDMDEGCRERGCIAVD
Ga0207193_12465133	3300020048	Freshwater Lake Sediment	XXXPLVETLMNISVLFHGSPSMLRHKLYEALDEYLPDLDEGCRERGCIAVDHFKEQP
Ga0211736_109676825	3300020151	Freshwater	MRYEQAKPLVEKLKVIAVLYHASQLLPLKIYEALDEFLPDMDEGCRERGCIAVDNFKEKIGDTRSKSQSES
Ga0214247_10208551	3300021135	Freshwater	MRYEQARPLVNTLMEIAVLNHASPSLLREKIYKALDEFLPDMDEGCRERGCIAV
Ga0213922_10134308	3300021956	Freshwater	MKYEQAKPLVEKLTDLAILYHASPSMLRFKIYTALDEYLPDMDEGCRTRGCIAVDDFAKEKK
Ga0222714_100011933	3300021961	Estuarine Water	VRYEQAKPLIEKLKVIAVLYHASAMLPMKIYEALDEYLPDMDEGCRERGCIAVDNFKENT
Ga0222714_100288965	3300021961	Estuarine Water	MRYEQAKPLVETLMNLAILYHGAPTMLRHKMYEALDSYLPHMDEGCRTRGCIAVDHLEKGAQ
Ga0222714_106153612	3300021961	Estuarine Water	VRYEQAKPLIEKLKVIAVLYHASAMLPMKIYEALDEYLPDMDEGCRERGCIAVDNFKEKK
Ga0222712_101751625	3300021963	Estuarine Water	SRRRTVRYEQAKPLIEKLKVIAVLYHASAMLPMKIYEALDEYLPDMDEGCRERGCIAVDNFKENT
Ga0222712_104724871	3300021963	Estuarine Water	VRYEQAKPLIEKLKVIAVLYHASAMLPMKIYEALDEYLPDMDEGCRERGCIAVDNFKE
Ga0181351_10080779	3300022407	Freshwater Lake	VRYEQAKPLIEKLKVIAVLYYASSMLPMKIYEALDEYLPDMDEGCRERGCIAV
Ga0181351_12200472	3300022407	Freshwater Lake	MRYERAKPLVEKLRIIAVLYHASPGMLPMKIYEALDEFLPDLDEGCRARGCIAVDNFKEKDT
Ga0212088_101067688	3300022555	Freshwater Lake Hypolimnion	MRYEQARPLVNTLMEIAVLNHASPSLLREKIYKALDEFLPDMDEGCRERGCIAVDDFKEKAVLGGEKKQEKA
Ga0209498_12416362	3300025135	Sediment	MRYEQAKPLLDTLIDLAYLYHGNKDLMRQRMYAALDDYLPDMDEGCRTRGCIAVDDFKEKKDE
Ga0207957_10146982	3300025372	Freshwater	MRYEQARPLVNTLMEIAVLNHASPSLLREKIYKALDEFLPDMDDGCRERGCIAVDDFKEKKA
Ga0208738_100006524	3300025379	Freshwater	MRYEQARPLVNTLMEIAVLNHASPSLLREKIYKALDEFLPDMDEGCRERGCIAVDDFKEKKA
Ga0208871_10000111	3300025381	Freshwater	MRYEQARPLVNTLMEIAVLNHASPSLLREKIYKALDEFLPDMDEGCRERGCIAVDDFKEK
Ga0208103_10244353	3300025436	Freshwater	MRYEQARPLVEKLMDIAVLYHGAPSVLRDKIYTALDEFLPDLDEGCRERGCIAVDHFKKEKT
Ga0208379_10942174	3300025598	Freshwater	MRYEQARPLVNTLMEIAVLHHASPSLLREKIYKALDEFLPDMDEGCRERGCIAVD
Ga0208498_10446523	3300025785	Freshwater	MRYEQARPLVNTLMEIAVLNHASPSLLREKIYKALDEFLPDMDEGCRERGCI
Ga0209704_10866064	3300027693	Freshwater Sediment	MRYEQAKPLVETLMNISVLFHGSPSMLRHKLYEALDEYLPDLDEGCRERGCIAVDHFKEQ
Ga0209599_100116252	3300027710	Deep Subsurface	MRYTQAKPLVETLMNIAVLYHASPTLLREKIYNALDEFLPDLDEGCRERGCIAVDHFKDK
Ga0209492_10104012	3300027721	Freshwater Sediment	MKYEQAKPLVEKLTDLAILYHASPSVLRLKIYTALDEYLPDMDEGCRTRGCIAVDDFAKEKK
Ga0209593_103539461	3300027743	Freshwater Sediment	EQEMRYEQAKPLVEKLMNLAVLYHGAPSMLRHKLYEALDEYLPDLDEGCRERGCIAVDYFKEKA
Ga0209296_11398082	3300027759	Freshwater Lake	MKYEQAKPLIEKLKVIAVLYYASSMLPMKIYEALDEYLPDMDEGCRERGCIAVDNFKEKNHGSV
Ga0209088_100775227	3300027763	Freshwater Lake	QAKPLIEKLKHIAVLYHAAPTMLREKIYEALDEYLPDMDEGCRERGCIAVDNFKEKNT
Ga0209088_100929153	3300027763	Freshwater Lake	VRYEQAKPLIEKLKHIAVLYHASKLLPIKIYDALNEYLPDMDEGCRERGCIAVDKFKETK
Ga0209088_103881722	3300027763	Freshwater Lake	VRYEQAKPLIEKLKVIAVLYHASQLLPMKIYEALDEYLPDMDEGCRERGCIAVDNFKEKK
Ga0209287_103010053	3300027792	Freshwater Sediment	MRYEQAKPLVEKLMNLAVLYHGAPSMLRHKLYEALDEYLPDLDEGCRTRGCIAVDNFKEK
Ga0209550_103875122	3300027892	Freshwater Lake	VGRLFLPCDLSDFMGDAMKYQQAKPLIEKLKVIAVLYYASSMLPMKIYEALDEYLPDMDEGCRERGCIAVDKFKEKNT
Ga0209777_103819351	3300027896	Freshwater Lake Sediment	MKYEQAKPLIEKLKVIAVLYHASAMLPMKIYEALDEYLPDMDEGCRERGCIAVDNFKEKNND
Ga0209820_11116722	3300027956	Freshwater Sediment	MRYEQAKPLVEQLLNLAILYHASPSMLRLKIYTALDEYLPDMDEGCRTRGCIAVDDFAKEKK
Ga0209299_11324153	3300027974	Freshwater Lake	VRYEQAKPLIEKLKHIAVLYHAAPTMLREKIYEALDEYLPDMDEGCRERGCIAVDNFKEKNT
Ga0209391_103623302	3300027975	Freshwater Sediment	MRYEQAKPLVEKLMNISVLYHGAPSMLRHKLYEALDEYLPDLDEGCRERGCIAVDHFKEQ
Ga0239581_11296291	3300029798	Freshwater Lake	PLVNTLMEIAVLNHASPSLLREKIYKALDEFLPDMDEGCRERGCIAVDDFKEKAVLGGEKKQEKA
Ga0315293_102922104	3300031746	Sediment	MKYEQAKPLIEKLKVIAVLYHASAMLPMKIYEALDEYLPDMDEGCRERGCIDIDKFKEKK
Ga0315909_101138044	3300031857	Freshwater	MRYEQAKPLVEKLKTIAVLYHASQLLPMKIYEALDEFLPDMDEGCRERGCIAVDNFAGEKDGAI
Ga0315285_106665292	3300031885	Sediment	MKYEQAKPLIEKLKVIAVLYHASAMLPMKIYEALDEYLPDMDEGCRERGCIAVDKFKEKK
Ga0334980_0196488_492_710	3300033816	Freshwater	MRYEQAKPLVEKLKVIAVLYHASPGMLPMKIYEALDEFLPDLDEGCRERGCIAVDNLKEKIGDARSKSQSEG
Ga0334986_0471141_456_623	3300034012	Freshwater	PLVETLMNLAVLYHGAPTMLRHKIYEALDNYLPHMDEGCRTRGCIAVDHLGKGAQ
Ga0334987_0046443_2198_2386	3300034061	Freshwater	MRYEQAKPLVETLMNLAILYHGAPTMLRHKIYEALDNYLPHMDEGCRTRGCIAVDHLEKGAQ
Ga0335027_0041546_2267_2455	3300034101	Freshwater	VRYEQAKPLVETLMNLAILYHGAPTMLRHKIYEALDNYLPHMDEGCRTRGCIAVDHLEKGAQ
Ga0335031_0044817_1825_2013	3300034104	Freshwater	VRYEQAKPLIEKLKVIAVLYHASQLLPMKIYEALDEYLPDMDEGCRERGCIAVDNFKEKNGG
Ga0335031_0648008_133_318	3300034104	Freshwater	MRYEQAKPLIEKLQVIAVLYHASPGMLPMKIYEALDEFLPDLDEGCRERGCIAVDNFKEK
Ga0335053_0716704_11_199	3300034118	Freshwater	MRYEQAKPLVETLMNLAVLYHGAPTMLRHKIYEALDNYLPHMDEGCRTRGCIAVDHLGKGAQ
Ga0335013_0190280_178_369	3300034284	Freshwater	MKYQQAKPLVEKLTDLAILYHASPSMLRLKIYMALDEYIPDMDEGCRTRGCIAVDDFAPKEEK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091308

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences