NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F091355

Metagenome / Metatranscriptome Family F091355

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F091355
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 125 residues
Representative Sequence MMTVDGTDFRIPQKGAATKGNAFASHKYAGKSALRYELGVDILAGNLVWIQGPYPAGKYTDIVIFNKVLRNFLEPGERVEADEGYRGHPDKIKCPGNDANPAENRGMQGRVRARHETLNGRL
Number of Associated Samples 46
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Eukaryota
% of genes with valid RBS motifs 22.12 %
% of genes near scaffold ends (potentially truncated) 72.90 %
% of genes from short scaffolds (< 2000 bps) 82.24 %
Associated GOLD sequencing projects 42
AlphaFold2 3D model prediction Yes
3D model pTM-score0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Eukaryota (62.617 % of family members)
NCBI Taxonomy ID 2759
Taxonomy All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater
(35.514 % of family members)
Environment Ontology (ENVO) Unclassified
(41.121 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(38.318 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 16.67%    β-sheet: 11.33%    Coil/Unstructured: 72.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.26
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF02984Cyclin_C 0.93



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms62.62 %
UnclassifiedrootN/A37.38 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002447|JGI24768J34885_10003956All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta4837Open in IMG/M
3300007561|Ga0102914_1236242All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta560Open in IMG/M
3300007561|Ga0102914_1272854All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta518Open in IMG/M
3300007636|Ga0102856_1074331All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta557Open in IMG/M
3300007642|Ga0102876_1212684All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta511Open in IMG/M
3300007718|Ga0102852_1082968Not Available624Open in IMG/M
3300007860|Ga0105735_1014636All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta1348Open in IMG/M
3300007860|Ga0105735_1130692Not Available548Open in IMG/M
3300007860|Ga0105735_1138562All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Mediophyceae → Lithodesmiophycidae → Lithodesmiales → Lithodesmiaceae → Ditylum → Ditylum brightwellii535Open in IMG/M
3300007861|Ga0105736_1021370All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta1185Open in IMG/M
3300007861|Ga0105736_1121509All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta581Open in IMG/M
3300007861|Ga0105736_1170852All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta506Open in IMG/M
3300007953|Ga0105738_1042419Not Available720Open in IMG/M
3300008021|Ga0102922_1084777All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta998Open in IMG/M
3300008263|Ga0114349_1027785All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta3209Open in IMG/M
3300008263|Ga0114349_1061522Not Available1769Open in IMG/M
3300008263|Ga0114349_1069036All Organisms → cellular organisms → Eukaryota1643Open in IMG/M
3300008263|Ga0114349_1089802Not Available1372Open in IMG/M
3300008263|Ga0114349_1090164Not Available1368Open in IMG/M
3300008263|Ga0114349_1095125All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta1315Open in IMG/M
3300008263|Ga0114349_1121217Not Available1098Open in IMG/M
3300008263|Ga0114349_1154742Not Available904Open in IMG/M
3300008263|Ga0114349_1173314Not Available822Open in IMG/M
3300008263|Ga0114349_1185567All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta774Open in IMG/M
3300008263|Ga0114349_1207287All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta698Open in IMG/M
3300008263|Ga0114349_1239778Not Available603Open in IMG/M
3300008265|Ga0114361_1002081All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta7053Open in IMG/M
3300008265|Ga0114361_1004812Not Available6092Open in IMG/M
3300008265|Ga0114361_1007134Not Available4343Open in IMG/M
3300008265|Ga0114361_1007668All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta4196Open in IMG/M
3300008265|Ga0114361_1008975All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta3879Open in IMG/M
3300008265|Ga0114361_1033205All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta1729Open in IMG/M
3300008265|Ga0114361_1088211Not Available962Open in IMG/M
3300008265|Ga0114361_1108461All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta862Open in IMG/M
3300008265|Ga0114361_1195708All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Mediophyceae → Lithodesmiophycidae → Lithodesmiales → Lithodesmiaceae → Ditylum → Ditylum brightwellii630Open in IMG/M
3300008265|Ga0114361_1195974All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta630Open in IMG/M
3300008265|Ga0114361_1229541All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Mediophyceae → Lithodesmiophycidae → Lithodesmiales → Lithodesmiaceae → Ditylum → Ditylum brightwellii575Open in IMG/M
3300008995|Ga0102888_1072582Not Available681Open in IMG/M
3300009024|Ga0102811_1417841Not Available509Open in IMG/M
3300009079|Ga0102814_10403197All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta744Open in IMG/M
3300009079|Ga0102814_10501883All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta661Open in IMG/M
3300009080|Ga0102815_10694754All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta575Open in IMG/M
3300009086|Ga0102812_10506137All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta660Open in IMG/M
3300010354|Ga0129333_11139767All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta650Open in IMG/M
3300011009|Ga0129318_10238059All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Mediophyceae → Lithodesmiophycidae → Lithodesmiales → Lithodesmiaceae → Ditylum → Ditylum brightwellii596Open in IMG/M
3300011009|Ga0129318_10373999All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta504Open in IMG/M
3300020048|Ga0207193_1032448All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana5980Open in IMG/M
3300020048|Ga0207193_1849495Not Available538Open in IMG/M
3300020109|Ga0194112_10501399All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta851Open in IMG/M
3300020109|Ga0194112_10775218All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta631Open in IMG/M
3300020513|Ga0208090_1053818All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta503Open in IMG/M
3300021108|Ga0214162_1044929Not Available744Open in IMG/M
3300021317|Ga0210309_1138799All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta596Open in IMG/M
3300021328|Ga0210298_1321331All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta767Open in IMG/M
3300021845|Ga0210297_1003432All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta532Open in IMG/M
3300024343|Ga0244777_10441586All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta806Open in IMG/M
3300024343|Ga0244777_10581109All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta681Open in IMG/M
3300027254|Ga0208177_1094055Not Available546Open in IMG/M
3300027256|Ga0208932_1062364All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta659Open in IMG/M
3300027649|Ga0208960_1030918All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Mediophyceae → Lithodesmiophycidae → Lithodesmiales → Lithodesmiaceae → Ditylum → Ditylum brightwellii1924Open in IMG/M
3300027751|Ga0208304_10309409All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta551Open in IMG/M
3300027757|Ga0208671_10054978All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta1477Open in IMG/M
3300027757|Ga0208671_10071452All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta1281Open in IMG/M
3300027757|Ga0208671_10080310Not Available1202Open in IMG/M
3300027836|Ga0209230_10746463All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta535Open in IMG/M
3300032092|Ga0315905_10298832All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Fragilariopsis → Fragilariopsis cylindrus → Fragilariopsis cylindrus CCMP11021546Open in IMG/M
3300033984|Ga0334989_0012069Not Available4471Open in IMG/M
3300033984|Ga0334989_0020104All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana3536Open in IMG/M
3300033984|Ga0334989_0028624All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta2990Open in IMG/M
3300033984|Ga0334989_0037143Not Available2645Open in IMG/M
3300033984|Ga0334989_0046506All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta2374Open in IMG/M
3300033984|Ga0334989_0084334Not Available1757Open in IMG/M
3300033984|Ga0334989_0088291All Organisms → cellular organisms → Eukaryota1717Open in IMG/M
3300033984|Ga0334989_0212447All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Saprolegniales → Saprolegniaceae → Aphanomyces → Aphanomyces astaci1059Open in IMG/M
3300033984|Ga0334989_0220721Not Available1035Open in IMG/M
3300033984|Ga0334989_0267615Not Available920Open in IMG/M
3300033984|Ga0334989_0420648Not Available682Open in IMG/M
3300033984|Ga0334989_0488578Not Available614Open in IMG/M
3300034019|Ga0334998_0316261All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Saprolegniales → Saprolegniaceae → Aphanomyces → Aphanomyces astaci922Open in IMG/M
3300034019|Ga0334998_0323636All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta908Open in IMG/M
3300034022|Ga0335005_0220336Not Available1166Open in IMG/M
3300034022|Ga0335005_0372651Not Available827Open in IMG/M
3300034064|Ga0335001_0213174Not Available1075Open in IMG/M
3300034064|Ga0335001_0226866All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta1037Open in IMG/M
3300034064|Ga0335001_0556411Not Available605Open in IMG/M
3300034064|Ga0335001_0617722Not Available569Open in IMG/M
3300034064|Ga0335001_0726609Not Available517Open in IMG/M
3300034068|Ga0334990_0163218All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Saprolegniales → Saprolegniaceae → Aphanomyces → Aphanomyces astaci1216Open in IMG/M
3300034095|Ga0335022_0427150All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta709Open in IMG/M
3300034107|Ga0335037_0197428All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta1102Open in IMG/M
3300034121|Ga0335058_0256577All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta1018Open in IMG/M
3300034167|Ga0335017_0014648All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica4450Open in IMG/M
3300034167|Ga0335017_0067355Not Available2113Open in IMG/M
3300034167|Ga0335017_0120487All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Saprolegniales → Saprolegniaceae → Aphanomyces → Aphanomyces astaci1539Open in IMG/M
3300034167|Ga0335017_0135487Not Available1441Open in IMG/M
3300034167|Ga0335017_0208487All Organisms → cellular organisms → Eukaryota1119Open in IMG/M
3300034167|Ga0335017_0244447All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta1016Open in IMG/M
3300034167|Ga0335017_0313065All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta871Open in IMG/M
3300034167|Ga0335017_0532834All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta617Open in IMG/M
3300034167|Ga0335017_0663566All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta533Open in IMG/M
3300034168|Ga0335061_0032140Not Available2808Open in IMG/M
3300034168|Ga0335061_0249754Not Available933Open in IMG/M
3300034200|Ga0335065_0798893All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta529Open in IMG/M
3300034357|Ga0335064_0533882Not Available742Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater35.51%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton22.43%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine21.50%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water6.54%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater2.80%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.80%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment1.87%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.87%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment1.87%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic0.93%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.93%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002447Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion MetagenomeEnvironmentalOpen in IMG/M
3300007561Estuarine microbial communities from the Columbia River estuary - metaG 1561A-3EnvironmentalOpen in IMG/M
3300007636Estuarine microbial communities from the Columbia River estuary - metaG 1371A-3EnvironmentalOpen in IMG/M
3300007642Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3EnvironmentalOpen in IMG/M
3300007718Estuarine microbial communities from the Columbia River estuary - metaG 1370A-3EnvironmentalOpen in IMG/M
3300007860Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372A_3umEnvironmentalOpen in IMG/M
3300007861Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372B_3umEnvironmentalOpen in IMG/M
3300007953Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373A_3umEnvironmentalOpen in IMG/M
3300008021Estuarine microbial communities from the Columbia River estuary - metaG 1569A-3EnvironmentalOpen in IMG/M
3300008263Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-53-LTREnvironmentalOpen in IMG/M
3300008265Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0126-100-LTREnvironmentalOpen in IMG/M
3300008995Estuarine microbial communities from the Columbia River estuary - metaG 1551A-3EnvironmentalOpen in IMG/M
3300009024Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705EnvironmentalOpen in IMG/M
3300009079Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741EnvironmentalOpen in IMG/M
3300009080Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759EnvironmentalOpen in IMG/M
3300009086Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713EnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300011009Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNAEnvironmentalOpen in IMG/M
3300020048Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915EnvironmentalOpen in IMG/M
3300020109Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015016 Mahale Deep Cast 400mEnvironmentalOpen in IMG/M
3300020513Freshwater microbial communities from Lake Mendota, WI - 20JUL2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021108Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnionEnvironmentalOpen in IMG/M
3300021317Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Washington, United States ? R1088 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021328Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R877 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021845Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R876 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024343Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fractionEnvironmentalOpen in IMG/M
3300027254Estuarine microbial communities from the Columbia River estuary - metaG 1561A-3 (SPAdes)EnvironmentalOpen in IMG/M
3300027256Estuarine microbial communities from the Columbia River estuary - metaG 1560A-3 (SPAdes)EnvironmentalOpen in IMG/M
3300027649Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027751Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713 (SPAdes)EnvironmentalOpen in IMG/M
3300027757Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759 (SPAdes)EnvironmentalOpen in IMG/M
3300027836Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027885Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)EnvironmentalOpen in IMG/M
3300032092Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121EnvironmentalOpen in IMG/M
3300033984Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Mar2001-rr0030EnvironmentalOpen in IMG/M
3300034019Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049EnvironmentalOpen in IMG/M
3300034022Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058EnvironmentalOpen in IMG/M
3300034064Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054EnvironmentalOpen in IMG/M
3300034068Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031EnvironmentalOpen in IMG/M
3300034095Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091EnvironmentalOpen in IMG/M
3300034107Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133EnvironmentalOpen in IMG/M
3300034121Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174EnvironmentalOpen in IMG/M
3300034167Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082EnvironmentalOpen in IMG/M
3300034168Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME06Apr2016-rr0183EnvironmentalOpen in IMG/M
3300034200Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190EnvironmentalOpen in IMG/M
3300034357Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME12May2017-rr0187EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24768J34885_1000395633300002447Freshwater And SedimentMLNDCTMTVDGTDFRIPQKGPTFASHKYAGKSAVRYELGVDIIAGNLVWIQGPYPAGTYNDIKIFNQCLRHHLEPGERVEADEGYRGHVDKVKGPGNDVSSKNVVMQGRVRARHETLNGRLKNWGILSQVF*
Ga0102914_123624213300007561EstuarineMTIDGSDFRVPQQGSATEGYPFGSHKYAGNSALRYELGISTLGGDLVWIQGPYPTGAYTDIIIFNKVVCNFLDPGERVKADKGYMGHPDKIVCPTNADKGPPEHQAMQGRVRACHETLNG
Ga0102914_127285413300007561EstuarineMSIDGTDFRITQKGPAFASHKYAGKSALRYELGIDILAGNLVWVGGPYPAGKWNDLKIFFNELAHCLEPGERVEADNGYVGHADKIKCPNNDCNPEENLEMQARVRSRHETFNARLKFWGILGQVYRH
Ga0102856_107433113300007636EstuarineLQVDFEKRKEGDVYNDCLMTIDGTDFRVAQTGAAITGNAFGSHKYSGKTALRYEIGVSILRGDLVWINGPYPAGAWTDIKIFNKVLRHFLEEGERVEADNGYVGATDKIKCPDNPCNRVENEGMQSR
Ga0102876_121268413300007642EstuarineLQVDFDRRFIDDIGNDCLMSVDGTDFRIPQKGQAKKGNPFGSHKYAGKSALRYELGVDIRGGSLVWIQGPYPAGKWPDIKIFNAVLANFLMRYERVEANDGYCGHPNKVKCPVNDIAPAEKLAMQARVRARHETINGR
Ga0102852_108296823300007718EstuarineMTIDGTDYRILQKGAARKGNAFGSFKYAGKSALRYELGVDILAGNLIWVSGPYPAGKYTDIAIFNSILANCLEPGERVEADNGYVRRPDKVKCPNNDCNRAENRVMQGIARSRHETLNGWLKAWGILGNVYRHDIREH
Ga0105735_101463623300007860Estuary WaterMSIDGTDFRILQQGPAVKGNAFGSHKYAGKSALRYELGIDILAGNLVWVGGPYPAGAWPDIKILKNELAHLLEPGERVEADNGYVGHPDKIKCPNNDCNPTENLGMQARVRSRHETFNGRLKFWG
Ga0105735_113069213300007860Estuary WaterVLNDCTMTVDGTDFRIPQKGAATKGNAFDSHKYAGKSALRYVLGPHPHGEPEVWIQGLYPAGKYTDIKISNNVLCHFLKPGKRIKADQGYHSHPDKIKCPGNNANLAENRAM*
Ga0105735_113856213300007860Estuary WaterMTVDGTDFRIPQQGDAIEGNPFGSHKYAGKSALRYELGVSIIGGDLLVWIQGPYPAGKYTDITIFNKVLAHFLEPGERVVADEGYAGHADKIVCPTNAGNPPELQKMQGRARARHETLNGRLKNWGILSQTF
Ga0105736_102137023300007861Estuary WaterMTIDGTDFRVPQQGLATEGNPFGSHKYAGKSALRYELGVSILGGDLVWIQGPYPAGAYNDIAIFNKVLRNFLDPGERVEADKGYAGHPDKIVCPANADKGPPERQAMQGRVRARHETLNSFTTKVVRK*
Ga0105736_112150913300007861Estuary WaterMTVDGTDFRIPQQGEAEEGNPFGSHKYAGKSALRYELGMSILGGDLVWIQGPYPAGAFTDITIFNKVLRNFLEPGEWVEADKGYAGHADKIVCPTNAGNPPELKEMQGRVRARHETLNG
Ga0105736_117085213300007861Estuary WaterTIDGTDFRILQKGAASKGNAFASHKYAGKSALRYKLGVDILAGNLVWIQGPYPAGKYTDIKIFNKVLRNFLEPGERVEADEGYRSHPDKIKCPGNDANPAENRAMQGRVRARHETLNGRLKNWGILS*
Ga0105738_104241913300007953Estuary WaterLGAHDVLNDCTMTVDGTDFRIPQKGAAMKGNAFASHKYAGKSALRYELGVDILAGNLVWIQGPYPAGKYTDIVIFNKVLRNFLEPGERVEADEGYCGHPDKIKCPGNNANPAENWAM
Ga0102922_108477713300008021EstuarineMTVDGTDFRVPQQGLAIEGNPFGSHKYAGKSALRYELGVSILGGDLVWIQGPYPAGAFTDISIFNKVLANFLEPGERVEADNGYAGHPDKIVCPANADKGPPEHRAMSGRVRARHETLHG
Ga0114349_102778513300008263Freshwater, PlanktonMTIDGTDFRILQKGIAKKGNAFGSHKHAGKSALRYELGIDILKGNLIWVEGPYPAGAWPDIKIFLNCLAGHLLPGERVEADNGYVGHPDKIKCPNNDCNPARNLGMQSAARSRHETFNGRLKNWGI
Ga0114349_106152213300008263Freshwater, PlanktonMLNDCTMTVDGTDFRILHKGIRTKGNAFGSHKYAGKSALRDELGVNILTGNLVWIQGPYTAGEHTGIKIFSKVLRNFFEPGERVEADEGYRGHPDKIKCRGNDVNPAGNGGMQG
Ga0114349_106903623300008263Freshwater, PlanktonMTIDGTDYRILQKGAARKGNAFGSFKYAGKSALCYELGVDIIAGNLIWASRPYPAGKYTDIAIFNSVLANCLEPGDRVEADNGYVGRPDKIKCPNNDCHPAENRVMQ*
Ga0114349_108980233300008263Freshwater, PlanktonMMIVGMDYRILQKGAARKGNAFSSFKYAGKSALRYELGVDIFAGNLVWVSGPYPAGKYTDIAIINSVLANCLEPEEHVEADNVYVGRPDKIKCLDNTATRRRTG*
Ga0114349_109016423300008263Freshwater, PlanktonMTINGTDYMILQRGAARKGNPFGSFKYAGKSALCYELGVDILAGNSIWVSGPYPAGKYTDIAVFNSVLANCLKPGERVEADNGYVGCPDKIKCPNNDLTRCQS*
Ga0114349_109512513300008263Freshwater, PlanktonMTIDGTDFRVPQTGEAKTGNAFASHKYSGKSALRYEIGVSIIGGDLVWIQGPYPAGHFNDIAIFNKVPRHFLEEGERVEADNGYVGATDKIKCPDNPCNPAENEG
Ga0114349_112121723300008263Freshwater, PlanktonMTIDGTDYRILQKGAARKGNAFGSFKHAGKSALHYELRVDILARNLIWVSGPYPAGKYTDVAIFDSVLANCLEPGERVEADNGYVGRPDKIKCPNNDCNPAENRVMQGIARSRHE
Ga0114349_115474213300008263Freshwater, PlanktonMMTVDGTDFRIPQKGAATKGNAFGPHKYAGKSALRYELGVDILARNLVWIQRTYPGSKYTDIKIFNKVLRNFLEPGERVEADEGYRGHPDKIKCPGNDANPAENRAMHGRVRARHETLN
Ga0114349_117331413300008263Freshwater, PlanktonMMINGTDYRIPQKGAARKGNAFGSFKYAGKSALRYELGVDILAGNLIWVSGPYPMGKYTDIAIFNSVLANCLEPGERVKADNGYVGCPNKIKCPNNDCNPAENRVMQGIARS
Ga0114349_118556723300008263Freshwater, PlanktonMSIDGTDFKIEQKGAAKKGNAFGSHKYAGKSALRYELGIDILAGNLVWVGGPYPAGAWPDIKIFMNELAHLLEPGERVEADNGYVGHADKIKCPNNDCNPAENLAMQARVRSRHETFNA
Ga0114349_120728713300008263Freshwater, PlanktonMGNDCLITVDGTDFQIPQKGLPKKGNAFASHKFAGKSALRYELGVSILGGDLVWIQGPYPAGKYTDIKIFNKVLRHYLEPGERVEADDGYRGHASKIKCPKNDANPAANLAMQGRAR
Ga0114349_123977823300008263Freshwater, PlanktonMTIDGTDYRILQKGAARKGNAFGSVKYAGKSALRYELGVDILAGNLIWVSGPYPADKYTDIAIFNSVLENCLEPGERVEADNGYYVGRPDKVKCPNNDCNPAENRVMQGIARSRHETLNGRLKAWG
Ga0114361_100208113300008265Freshwater, PlanktonMTVGGTDFRIPQKGTATKGIAFASHKYAGKSALRYELGVDILTGKLVWIQGPYPAGKYTDIKIFNKVLRNFLEPDERVEADEGYRGHPDKIKCPGNDTNPAENRGMQGRARAHHETLNGRLKNWGILSQVFRHHIMMPAMCPGRVRW*
Ga0114361_100481233300008265Freshwater, PlanktonMMIVGMDYRILQKGAARKGNAFSSFKYAGKSALRYELGVDIFAGNLVWVSGPYPAGKYTDIAIINSVLANCLEPGEHVEADNVYVGRPDKIKCLDNTATRRRTG*
Ga0114361_100713423300008265Freshwater, PlanktonMTIDGTDYRILQKGAARKGNAFGSFKHAGKSALHYELRVDILARNLIWVSGPYPAGKYTDVAIFDSVLANCLEPGERVEADNGYVGRPDKIKCRTMTATRRRTG*
Ga0114361_100766823300008265Freshwater, PlanktonLQVDFEKRKEGNVYNDCLMTIDGTDFWVAQTGAVITGNAFGSHKYSGKSALRYEIGVSILRGDLVWINGPYPAGAWTDIKIFNKVLRHFLEEGERVKADNGYVGATDKIKCPNNPCNPPTRECNPAQGTATRRSTDVS*
Ga0114361_100897513300008265Freshwater, PlanktonMMIDGTDYRILQKGATRKGNTFDSFKYAGKSALRYELGVDNLVGNLIWVSGPSPAGKYTYIAIFNSVLANCLKPGERVEADNGYVGRPDKIKCPNDDCNPVENRVMQGIARSRHETLNGRLKAWGILGNVYRH
Ga0114361_103320513300008265Freshwater, PlanktonMTIDGTNYRIQQKGVAKKGNLFGSHKYGGKSALQYELGIDILAGNLVWVSGPYPAGRWTDVKIFDDVLSNLLEPGERIEADNGYVGRADKVKCPNNDCNPPENLGMQSAARSRHE
Ga0114361_105836023300008265Freshwater, PlanktonMHMPFFQHPVLTPLLLLPPQTQIDFEDRKINDIGNDCLMSIDGTDFRIPQTGEAKTGNWFASHKFSFKSALRYEFGVSIIGGDLVWIQGPYPAGRFNDIAIFNKVLHHFLEPGERVEADNGYVGAADKIKCPDNPCNPVENEGMQSRARYRGIR*
Ga0114361_108821113300008265Freshwater, PlanktonMHDVLNDCLMTINGTDFRIPQKGAAKKGNAFASHKYAGKSTLRYVLGVDILVGNLVWIQGPYPAGKYSDIAIFNGVLTFFLEPGERVEADKGYSGYPDKIKCPANNTNPAENRAMRGKARARLLDIGFTTKPYHTCGMA*
Ga0114361_110846113300008265Freshwater, PlanktonMTIDGTDYRIEQKGVAKKGNLFGSHKYGGKSALRYELGIDILAGNLVWVSGPYPAGRWTDVKIFDDVLSNLLEPGERVEADNGYVGRADKVKCPNNDCNPPENLGMQSAARSRHE
Ga0114361_119570823300008265Freshwater, PlanktonPPQTQIVFKSRLGNHDVGNDCTMTVDGTDFRIQQKGTATKGNTFASHKYEGKSALRYELGVDILTGNLVWIQGLYGKYTDIKIFNKVLRNFLEPGDRVEADEGYCGHPDKSKCPGNYANPAENRGMQGRARARHETLNGRLRTGGSSPRSSATTT*
Ga0114361_119597423300008265Freshwater, PlanktonMTIDGTDFRVPQQGLAKEGNPFGSHKYAGKSALRYELGVSILGGDLVWIQGPYPAGAYTDITIFNKVLRNFLEPGERVEADKGYAGHADKIVCPTNVGNPPELKEMQGRVR
Ga0114361_122954113300008265Freshwater, PlanktonKLYDVGNDCLMTIDGTDFRVPQTGEAKTGNAFASLKYAGKSALRYEIGVSIIGGDLVWIQGPYPARRFNGIAIFNKVLCHFLEEGERVEADNGYVGATDKINCPDNPCNPVENGDNQRTL
Ga0102888_107258213300008995EstuarineRIPQQGEAKPGNAFTSHKYGGKSALHYELGTSILGGDLVWIQGPYPAGKFTDISIFCKVLSNFLDPGERVEADKGYKGHPDKIKCPSNPANPPENKAMQGRVCAHHETLNGRLKAWGILFQVYHHDI*
Ga0102811_141784113300009024EstuarineMSVDGTDFRIYQQGRAEKGNPFGSHKYAGKSALRYELGVDILAGHLVWIQGPYPAGKYNDITIFNKVLVNFLDPYERVEADCGYRGHPSYIKCPENAANPVENLAMQARVR
Ga0102814_1040319713300009079EstuarineMTINGTDYHILQKGVAKKGNIFGSHKYGGKSALRYELGIDILAGNLVWVSGPYPAGKWTDVKIFDNELSDSLEPGERVEADNGYVGRPDKIKCPNNDCNPAENRAMQGIARS
Ga0102814_1050188313300009079EstuarineMSIDGTDFRITQKGPAFASHKYAGKSALRYELGIDILAGNLVWVGGPYPAGKWNDLKIFFNELAHCLEPGERVEADNGYVGHADKIKCPNNDCNPEENLGMQARVRSRHETFNARLKFWGILGQVYRHN
Ga0102815_1069475413300009080EstuarineMLQVDFNRRKKMDIGNNCLMSIDGTDFRIPQTGAPVRGNSFASHKYAGKSALRYEIRVSILGGDLVWIQGPYPVGSFNNVKIFNKVLRHWLDPSERVEADNGYVGCADKVKCPDNPCNPPANERMQSRVRSRHK
Ga0102812_1050613713300009086EstuarineVDFESRLGGHDVGNDCLMSVDGTDFRITQKGIAKKGNAFGSHKYAGKSALRYELGVDILAGKLIWIQGPYPAGKWPDIKIFTSVLAHFLEPGERVEADDGYRGHADKVKCPKNDANPAENLKMQGRVRARHETLNGRLKNWGIL
Ga0129333_1113976713300010354Freshwater To Marine Saline GradientLQVDFDRRFIDDIGNDCLMSVDGTDFRIHQKGQAKKGNPFGSHKYAGKSALRYELGVDIRGGNLVWIQGPYPAGKWPDIKIFNAVLANFLERYERVEADDGYRGHPNKVKCPLNDIAPAEKLAMQARVRARHETINGRLKNW
Ga0129318_1023805913300011009Freshwater To Marine Saline GradientMTIDGTNFRVPQTGEAKTGNAFASHKYAGKSALRYKIGVSIIGGDLVWIQGPYPAGRFNDIAIFNKVLRHFLEEGERVEADNSYDGATDKIKCPDNPCNPVENEGMQSRARYRHETINGCFKSWGI
Ga0129318_1037399913300011009Freshwater To Marine Saline GradientLQVDFEKRKEGNVYNNCLMTIDGTNFWVAQTGAAITGNAFRSHKYSGKSALRYEIGVSILRGDLVWINGPYPAGAWTDIKIFNKVLRHFLKEGERVEADNGYVGTTDKIKCPNNPCNPVANK
Ga0207193_103244813300020048Freshwater Lake SedimentVGNNCLMMIDGTDFRILQKGAARKGNAFGSFKYAGKSALRYELGVDILAGNLVWVSGPYPAGKYTDIAIFNSVLAHCLEPGEHVDVEADNGYVGRLDKIKCPNNDFNPAENRLMQGIARFCNETLNG
Ga0207193_184949513300020048Freshwater Lake SedimentVTKGNAFGSHKYTKYTGRSALRCELGVYILTGNLVWIQGPYPASKYTDIKCFNKVLCNFLERGEWVEADEGYHGHPNKIKCPGNEANPVENRGMQGRVRARHEMMNGHLMN
Ga0194112_1050139913300020109Freshwater LakeMSIDGTDFRIPQTGPSIRGNAFASHKYGGRSALRYEIGVSILGGDLVWIQGPYPAGAFNDVKIFNKVLRHFLEPGERVEADNGYVGAADKVKCPDNPCNPVANEGKQSRVRSRHETINGRFKTWGNL
Ga0194112_1077521813300020109Freshwater LakeMTIDGTDFRIRQKGVAKKGNAFGSHKYAGKSALRYELGVDILKGNLVWVEGPYPAGAWPDLKIFLNTLAGHLLPGKRVEADNGYVGHPDKIKCPNNDCNRAKNLEMQSAARS
Ga0208090_105381813300020513FreshwaterPSTYFHDIVASHLSQKYYSSHHLSPKPQIDFDSRLGIHDVGNDCLMSVDGTDFRIPQKGAATKGNPFGSHKYVGKSALCYELGVDILMGNLVWIQGPYPAGAWPDIKIFTSCLAHFLEPYERVEADDGYRGHADKVKCPKNVVNPVENLKMQGRVRARHETLKGRLK
Ga0214162_101567613300021108FreshwaterMTIDGTDFRVAQTGAAITGNAFGSHKYSGKSALRYEIGVSILRGDLVWINGPYPAGAWTDIKIFNKVLRHFLEEGERVEADNGYVGATDKIKCPNNPCN
Ga0214162_104492913300021108FreshwaterVGNDCLMMIDGTDYRILQKGAARKGNAFGSFKYAGKSALRYELGVDILAGNLIWVSGPYPAGKYTDVAIFDSVLAHCLEQGERVEADNGYVGRPLQIKCPKNDCNPAENRVMQGIARSRHETLS
Ga0210309_113879913300021317EstuarineMSIDGTDFRIPQMGAAIRGNAFASHKYAGKSALRYEIGVSILGGDLVWIQGPYPAGKWTDIKIFNQVLRNFLDTGECVEADNGYVGAIDKVKCPDNPCNPVANEGMQSRV
Ga0210298_132133113300021328EstuarineLQVDFEKRKEGDVYNDCLMTIDGTDFRVAQTGAAITGNAFGSHKYSGKSALRYEIGVSILRGDLVWINGPYPAGAWTDIKIFNKVLRHFLEEGERVEADNGYVGATNKINCPNNPCNPVA
Ga0210297_100343213300021845EstuarinePTPPSQTQVDFESRLGRHDVGNDCLMSVDGTDFRIPQKGIAKKGNAFGSHKYAGKSALRYELGIDILAGKLVWIQGPYPAGKWPDIKIFNAVLSHFLEPGERVEANDGYRGHADKVKCPQKAANPVANLAMQGESGRVTRR
Ga0244777_1044158623300024343EstuarineMTVDGTDFRVPQQGLAIEGNPFGSHKYAGKSALRYELGVSILGGDLVWIQGPYPAGAFTDISIFNKVLANFLEPGERVEADKGYAGHPDKIVCPANADKGPPERRAMSGRVRA
Ga0244777_1058110923300024343EstuarineCTMTVDGTDFRIPQKGAATKGNAFASHKYAGKSALRYELGVDILAGNLVWIQGPYPAGKYTDIVIFNKVLRNFLEPGERVEADAGYRGHPDKIKCPGNDANPAENRGMQGRVRARHETLNGRLKN
Ga0208177_109405513300027254EstuarineMTIDGSDFRVPQQGSATEGYPFGSHKYAGNSALRYELGISTLGGDLVWIQGPYPTGAYTDIIIFNKVVCNFLDPGERVKADKGYMGHPDKIVCPTNADKGPPEHQAMQGRVRACHET
Ga0208932_106236423300027256EstuarineMSVDGTDFRIYQQGRAEKGNPFGSHKYAGKSALRYELGVDILAGHLVWIQGPYPAGKYNDITIFNKVLVNFLDPYERVEADCGYRGHPSYIKCPENAANPVENLAMQARVRSRHETLNGRLKNWGI
Ga0208960_103091813300027649Freshwater LenticMLNDCTMTIDGTDFRIPQKGPTFASHKYAGKSAVRYELGVDIIAGNLVWIQGPYPAGTYNDIKIFNQCLRHHLEPGERVEADEGYRGHVDKVKGPGNDVSSKNVVMQGRVRARHETLNGRLKNWGILSQVF
Ga0208304_1030940923300027751EstuarineMSVDGTDFRITQKGIAKKGNAFGSHKYAGKSALRYELGVDILAGKLIWIQGPYPAGKWPDIKIFTSVLAHFLEPGERVEADEGYAGHPDKVKCPANPCNPPENLAMQGRVRSRH
Ga0208671_1005497813300027757EstuarineVGNDCLMSIDGTDFRITQKGPAFASHKYAGKSALRYELGIDILAGNLVWVGGPYPAGKWNDLKIFFNELAHCLEPGERVEADNGYVGHADKIKCPNNDCNPEENLEMQARVRS
Ga0208671_1007145213300027757EstuarineMSIDGTDFRIPQTGAAIRGNAFASHKYAGKSALRYEIGVSILGGDLVWIQGPYPAGSFNDAKIFNKVLRHWLEPGERVEADNGYVGCADKVKCPDNPCNPPANERMQSRVRSRHETINGHFKTWG
Ga0208671_1008031013300027757EstuarineDCLMSVDGTDFRIYQQGRAEKGNPFGSHKYAGKSALRYELGVDILAGHLVWIQGPYPAGKYNDITIFNKVLVNFLDPYERVEADCGYRGHPSYIKCPENAHQRLSYGSFGTYIVDYHP
Ga0209230_1074646313300027836Freshwater And SedimentMTIDGTDFRVPQQGLAKEGNPFGSHKYAGKSALRYELGVSILGGDLVWIQGPYPAGAYTDITIFNKVLRNFLEPGERVEADKGYAGHADKIVCPTNAGNPPELKEMQGRVRARHETLNGWLKNWGILYQV
Ga0209450_1025495313300027885Freshwater Lake SedimentLSPSTYFHDITASHLSQKYYSSHHLSPKPQIDFDSRLGIHDVGNDCLMSMDGTDFRIPQKGAATKGNPFGSHKYAGKSALRYELGVDILMGNLVWIQGPYPAGAWPDIKIFTSCLAHFLEPYERVEADDGYRGHVDKVKCPKNDVNPVENLK
Ga0315905_1029883223300032092FreshwaterMTIDGTDFRIPQTGEAKTGNAFASHKYAGKSALRYEIGVSIIGGDLVWIQGPYPAGRFNDIAIFNKVLRHFLEEGERVEADNGYVGATDKIKCPDNPCNPAENEGMQSRARYRHETINGRFKSWGILRQTYRHDIR
Ga0334989_0012069_3228_36143300033984FreshwaterMQIVFESRLGHDLLNNCMMPVDGTDLRIPPKGIATKGNAFASHKYTRKSALCYELGVNILAGNLVWIQGPYPAGKYTDITIFNKVLRHFLSRPTRAILSGNDMIPAENRGMQGRVRARHETLNRRLKN
Ga0334989_0020104_1421_17203300033984FreshwaterMTVGGTDFRIPQKGIETKGNAFGSHKYAGKSALWYELGVDILAGNLVWIQGPYPTGKYTNIKIFNRVLRNFLRYRGHPDKIKRPGNGANPEENRGMRGG
Ga0334989_0028624_1329_17423300033984FreshwaterMTVNGTDFLIPQKGAATKGTAFASHKYAGKSALRYELGVDILTGNLVWIQGPYPAGKYTDIKIFNKVLRNFLELGKWVEADEEGYRGHPDKIKCPGSDANPAENRAMQGRAVRARHETLNGRLKNWGILSTRSSATT
Ga0334989_0037143_1311_17543300033984FreshwaterMTDGGSDFRIPQKGVAKKGNAFASHMYAGKSALRYELGVHILTGNLVWIQGPYPASMFTDIQIFNKVLMCFLDPGEPVEADEGCRGHTDKVKCPGYDANPAEKRAMQGRVRAQHETLKRWMKNWGILSKRSSAITSRFTAMCFRHAW
Ga0334989_0046506_1123_15153300033984FreshwaterMTINGMDYRILQKGAARKGNAFGSFKYASKSALHYKLGVDILTGNLIWVLRPYPVGKYTDIAIFISVLANCLEPGERVEADNGYVGRPDKIKCPNNDCNPAENRVMQGIERSHHETLNRRLKAWGILGNA
Ga0334989_0084334_361_7683300033984FreshwaterMLNDCTMTVDSMDFRIPQKGVTTKGNAFTSNKYTRKSTLRYKLGVDILVGNLVWIQGSYPAGKYTIFNKVLRKFLKPGERIEADEGNRGHPCKIKCPGNDMNPAENQAMQGRVRARHETLNGRLKNWGILSQVSC
Ga0334989_0088291_842_12013300033984FreshwaterLFGSHKYVGKSSLRYELGVDILAGNLVWIQGPYPAGKYTDIAIFNKVLQNFLEPGERVEADEGYRGHPDKIKCLGNVANPAENRAMQGRVRARHETLNGRLKNWGATTSRGKSLPSSHL
Ga0334989_0212447_642_10583300033984FreshwaterLGAHDVLNDCMMTVDGTNFRIPQKGAATKGNAFASHKYAGKSALSYELGVDILAGNLVWIQGPYPAGKYTVIKIFNKVLRNFLEPGERVEADEGYRGHPDKIKCPGNDANPAENRGMQGRVRARHETLNGRLKNWGILS
Ga0334989_0220721_101_5083300033984FreshwaterLGVHDVLNNCTMTVYGTDFRIPQKEAATKGNAFASHKYAGKSALCYELGVNILAGNLVWIQGPYPAGKYNDIKIFNKALSNFLVEAGERVEADKGYRGHLDKIKCPGNDANPTENREMQGRARARHETLNGRLKN
Ga0334989_0267615_34_4563300033984FreshwaterLGVHNVLNDCTMTVNGTDFRIPQKGAATKGNAFASHKFAGKSALRYELGVDILAGNLVWIQGPYPAGKYTDIKIFNKVLRNFLEPGERVEADEGYRGHPDKIKCPGNDMNPAENRAMQGRVRARHETLNGRLKNWGICHS
Ga0334989_0420648_3_3173300033984FreshwaterMVSEYPMKRESLAMPCAQKGAARKGNAFGSFKYAGKSAHHYELGVDILAGNLIWVSDPAGKYTDIAIINSVLTNCLEPGEHVEADNGYVGRPDKIKCPNNDCNPA
Ga0334989_0488578_250_6123300033984FreshwaterMTIDGTDYRILQKGAARKGNAFGSFKYAGKSALCYELGVDILAGNLIWVSGPYPAGKYTDIAIFNSVLANCLEPGERVEADNGYVGRPDKIKCPNNDCNTAENRVMQGIARSRHETLNGR
Ga0334998_0316261_562_9213300034019FreshwaterMTIDGTDFQIPQQGIATKGNAFASHKFAGKSALRYELGVSILGGDLVWIQGPYPAGEYPDVKIFNKVLRHFLEPGERVEADEGYAGHPDKVKCPANPGNPPENLAMQGRVRSRHETLNGR
Ga0334998_0323636_2_3733300034019FreshwaterMTVDGTDFRIPQKGAAVRGNAFASHKYAGKSALRYELGVDILAGNLVWIQGPYPAGKYTDIKIFNSVLRHYLEPGERVEADNGYVGHADKIKCPDNAANPEENLAMQGRVRSRHETLNGRLKNW
Ga0335005_0220336_1_4263300034022FreshwaterLGTHDVLNNCTMTVGGAYFCIPHKGVATKGNAFASHKYTGKSALRYELGVDILVGNLVWIQDPYPAGKFTDIKMFNKVLRNFLEPGERVEADEGYRDHPDKIKCPGNDANPAENGAMQGRVRVRHETLNGRLKNWGVISLVF
Ga0335005_0372651_3_3743300034022FreshwaterDFRIPQKGVTTKGNAFTSNKYTRKSTLRYKLGVDILVGNLVWIQGSYPAGKYTIFNKVLRKFLKPGERIEADEGNRGHPCKIKCPGNDMNPAENQAMQGRVRARHETLNGRLKNWGILSQVSC
Ga0335001_0213174_641_10753300034064FreshwaterMAINVTNYRILQKGAARKGNAFGSFKYAGKSALRYKLGVDILAGNLVWVWGPYPAGKYTDIAIFNSVLTNCLEPGERFEADNGYVERLDKIKHPNNDCNLAENRVMQGIARSRRETLNRWLKACGILGYAATTSESTGQFSTCVP
Ga0335001_0226866_197_5743300034064FreshwaterMTIDGTNFCVPQKGLPKKGNAFAFASHKYAGKSALRYELGISILGGDLVWIQGPYPAGKYTDIIIFNKVLTNFLEPGKRMEANDSYRGHADKIKCPKNDANPTENLAMQGRARARHETFNRQLKN
Ga0335001_0556411_135_6053300034064FreshwaterMPIVAIPQIDFESRLGARDVGNDCLMTINGMDYRILQKGAARKGNAFGSFKYAGKSALHYKLGVDILTGNLISVLRPYPAGKYTDIPIFNSVLSNCLEPGERVEADNGYVGRPDKIKCPNNDCNPAENRVMQGIARSRHETLNRRLKAWGILGNAYP
Ga0335001_0617722_235_5643300034064FreshwaterMTVNEMDFRISQKGIVEKGNAFASHKYAGKSTLRYKLGVDILAGNLAWIQGPYPASNHTDIKFFNKVLRHFLEPGERVEADEGYCGHPDKIKCPGNDANPAENRAMQGG
Ga0335001_0726609_163_5163300034064FreshwaterMSINGTDFRIPQTGKATTSNWFASHKYVGKSALRYKIWVNILGGDLVWIQGPYPAGQFTNIKNDKKVLRQFLKTGKCIEADKGYLGAANEIKCPNNSCNPVKNKGMQSCTQSHHETIN
Ga0334990_0163218_2_3433300034068FreshwaterMTIDGTDFRVPQQGLAKEGNPFGSHKYAGKSALRYELGVSILGGDLVWIQGPYPAGAYTDITIFNKVLRNFLEPGERVEADKGYAGHADKIVCPTNAGNPPELKEMQGRVRARH
Ga0335022_0427150_342_7073300034095FreshwaterMQINFEDQKLYDVGNDCLMTIDGTDFRVPQTGEAKTGNWFASHKYAGKSALRYEIGVSIIGGDLVWIQGPYPAGRFNDIAIFNKVLRHFLEEGERVEADNGYVGATDKIKCPDNPCNPVENE
Ga0335037_0197428_2_3853300034107FreshwaterMTIDGTDFRVPQQGLAKEGNPFGSHKYAGKSALRYELGVSILGGDLVWIQGPYPAGAYTDITIFNKVLRNFLEPGERVEADKGYAGHADKIVCPTNVGNPPELKEMQGRVRARHETLNGRLKNWGILS
Ga0335058_0256577_636_10163300034121FreshwaterLQVDFEKRKEGDVYNDCLMTIDGTDFRVAQTGAAITGNAFGSHKYSGKSALRYEIGVSILRGDLVWINGPYPAGAWTDIKIFNKVLRHFLEEGERVEADNGYVGATDKIKCPNNPCNPVANEGMQSR
Ga0335017_0014648_3978_43853300034167FreshwaterLGVHDVLNNCTMTVYGTDFRIPQKEAATKGNAFASHKYAGKSALCYELGVDILAGNLVWIQGPYPAGKYTDIKIFNKALSNFLVEAGERVEADKGYRGHLDKIKCPGNDANPTENREMQGRARARHETLNGRLKN
Ga0335017_0067355_1733_21133300034167FreshwaterLGAHDVLNDCTTTVNGTDFCIPQKGTATKGNSFASHKYAGKSALRYKLGADILVGNLVWIQGPYPAGKYTDIKIFNKILRNFLELGERVEADEGYRGHPDKIKCPGNDANPAENLGMHGEGKGTSRD
Ga0335017_0120487_631_10023300034167FreshwaterMTVGGTDFRIPQKGAATKGNAFASHKYAGKSALRYELGVDILAGNLVWIQGPYPAGKYTDIVIFNKVLRNFLEPGERVEADEGYRGHPDKIKCPGNDANPAENRGMQGRARARHKTLNGRLKN
Ga0335017_0135487_399_7913300034167FreshwaterMTINGMDYRILQKGAARKGNAFGSFKYASKSALHYKLGVDILTGNLIWVLRPYPVGKYTDIAIFISVLANCLEPGERVEADNGYVGRPDKIKCPNNDCNPAENRVMQGIERSRHETLNRRLKAWGILGNA
Ga0335017_0208487_735_11183300034167FreshwaterLGAHDVLNDCTMTVNGTDFRIPQKGAATKGNAFASHKYAGKSALRYELGVDILTGNLVWIQGPYPAGKYTVIKIFNKVLRNFLEPGERVEADEGYRGHPDKIKCPGNDANPAENRGMQGRVRARHETL
Ga0335017_0244447_2_3823300034167FreshwaterMTIDGTDYRILQKGAAMKGNAFGSFKYAGKSALRYELGVDILAGNLVWVSGPYPAGKYTDIAIFNSVLANCLEPGERVEADNGYVGRPDKIKCPKNDCNPAENRVMQGIARSRHETLNGRLKAWGIL
Ga0335017_0313065_504_8693300034167FreshwaterMMTVDGTDFRIPQKGAATKGNAFASHKYAGKSALRYELGVDILAGNLVWIQGPYPAGKYTDIVIFNKVLRNFLEPGERVEADEGYRGHPDKIKCPGNDANPAENRGMQGRVRARHETLNGRL
Ga0335017_0532834_236_6163300034167FreshwaterMTIDGTDYRILQKGAARKGNAFGSFKYAGKSALRYELGVDILAGNLVWVSGPYPAGKYTNIAIFNSVLANCLEPGEHVEADNGYVGRPDKIKCPKNDCNPAENRVMQGIARSRHETLNGRLKAWGIL
Ga0335017_0663566_164_5323300034167FreshwaterLGAHDVLNDCTMTVDGTDFHIPQKGAATKGNALGSHKYAGKSALRYELGVDILTGNLVWIQGPYPAGKYTDIKIFNKVLRNFLKPGERVEADEGYRGHPDKIKCPGNDANPAENRGMQGRVRA
Ga0335061_0032140_1_3723300034168FreshwaterMTDGGTDFRIPQKGVAKKGNAFASHMYAGKSALRYELGVHILTGNLVWIQGPYPASMFTDIQIFNKVLMCFLDPGEPVEANEGCRGHTDKVKCPGYDANPAEKRAMQGRVRAQHETLKRWMKNW
Ga0335061_0249754_565_9333300034168FreshwaterMTIDGTDFRILQKGAARKGNAFGSFKYAGKSALRYELGVDILAGNLIWVSGPYPAGKYTDVAIFDSVLAHCLEQGERVEANNGYVGRPLQIKCPKNDCNPAENRVMQGIARSRHETFNGRLKA
Ga0335065_0798893_2_4183300034200FreshwaterMGNDCLMSIDGTDFRIPQTGTAIRGNAFASHKYAGKSALRYEIGVSILGGDLVWIQGPYPAGAFNDVKIFNKVLRHFLEPGERVEADNGYIGAADKVKCPDNPCNPVANEGKQSRVRSRHETINGRFKTWGILSQVYRH
Ga0335064_0533882_2_3793300034357FreshwaterMTIDGTDYRILQKGAARKGNAFGSFKYAGKSALRYELGVDILAGNLIWVSGPYPAGKYTDVAIFDSVLAHCLEQGERVEADNGYVGRPLQIKCPKNDCNPAENRVMQGIARSRHETFNGRLKAWGI


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.