Metagenome Family F091438

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091438
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	48 residues
Representative Sequence	AHAQCPVLAIPPPALARELRHDRLAWVFWHRPLTPERVLRDQPKPAT
Number of Associated Samples	78
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	94.39 %
% of genes from short scaffolds (< 2000 bps)	91.59 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.402 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (42.991 % of family members)
Environment Ontology (ENVO)	Unclassified (54.206 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (53.271 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.33% β-sheet: 0.00% Coil/Unstructured: 70.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF02702	KdpD	14.95
PF00999	Na_H_Exchanger	10.28
PF10011	DUF2254	8.41
PF00324	AA_permease	1.87
PF01699	Na_Ca_ex	0.93
PF01061	ABC2_membrane	0.93
PF12697	Abhydrolase_6	0.93
PF00582	Usp	0.93
PF13683	rve_3	0.93
PF00723	Glyco_hydro_15	0.93
PF08450	SGL	0.93
PF02613	Nitrate_red_del	0.93
PF02775	TPP_enzyme_C	0.93
PF00282	Pyridoxal_deC	0.93
PF13520	AA_permease_2	0.93
PF00702	Hydrolase	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2205	K+-sensing histidine kinase KdpD	Signal transduction mechanisms [T]	14.95
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	10.28
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	10.28
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	10.28
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	10.28
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	10.28
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	1.87
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	1.87
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	1.87
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	1.87
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.93
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	0.93
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	0.93
COG2180	Nitrate reductase assembly protein NarJ, required for insertion of molybdenum cofactor	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.93
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.93
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.40 %
Unclassified	root	N/A	48.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.40 %
Unclassified	root	N/A	48.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.40 %
Unclassified	root	N/A	48.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.60 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	44.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.60 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	42.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.60 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	37.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.60 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.74 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.87 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.87 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.87 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.87 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.93 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.60 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.87 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.87 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.87 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.93 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.93 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.93 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.60 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.87 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.87 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.93 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.93 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.93 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.93 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.60 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.87 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.87 %
Nonomuraea diastatica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea diastatica	0.93 %
Nocardioides cynanchi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	0.93 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.93 %
Actinoplanes globisporus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	0.93 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_101753298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	801	Open in IMG/M
3300004635\|Ga0062388_102797630	Not Available	514	Open in IMG/M
3300005180\|Ga0066685_10129372	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300005332\|Ga0066388_101078349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1357	Open in IMG/M
3300005436\|Ga0070713_101167051	Not Available	745	Open in IMG/M
3300005437\|Ga0070710_11123155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	578	Open in IMG/M
3300005450\|Ga0066682_10676872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	637	Open in IMG/M
3300005518\|Ga0070699_100526404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1075	Open in IMG/M
3300005561\|Ga0066699_10616478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	779	Open in IMG/M
3300005764\|Ga0066903_104917668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	710	Open in IMG/M
3300005764\|Ga0066903_108010145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	542	Open in IMG/M
3300005764\|Ga0066903_108072633	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300006059\|Ga0075017_101062950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	631	Open in IMG/M
3300007076\|Ga0075435_101385323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300009038\|Ga0099829_10528411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	980	Open in IMG/M
3300009089\|Ga0099828_10941496	Not Available	771	Open in IMG/M
3300010043\|Ga0126380_10655489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	836	Open in IMG/M
3300010043\|Ga0126380_10678524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	825	Open in IMG/M
3300010043\|Ga0126380_12253190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	505	Open in IMG/M
3300010048\|Ga0126373_10479519	Not Available	1283	Open in IMG/M
3300010048\|Ga0126373_11474138	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300010333\|Ga0134080_10354418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	669	Open in IMG/M
3300010361\|Ga0126378_13108006	Not Available	528	Open in IMG/M
3300010362\|Ga0126377_12459813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	597	Open in IMG/M
3300010366\|Ga0126379_12026302	Not Available	678	Open in IMG/M
3300010379\|Ga0136449_104367756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	522	Open in IMG/M
3300012201\|Ga0137365_10750590	All Organisms → cellular organisms → Bacteria → Terrabacteria group	713	Open in IMG/M
3300012202\|Ga0137363_11237306	Not Available	634	Open in IMG/M
3300012210\|Ga0137378_10992761	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300012351\|Ga0137386_10365856	Not Available	1038	Open in IMG/M
3300012351\|Ga0137386_11169911	Not Available	540	Open in IMG/M
3300012359\|Ga0137385_10891815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	736	Open in IMG/M
3300012971\|Ga0126369_10346839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1505	Open in IMG/M
3300012971\|Ga0126369_12494541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300015372\|Ga0132256_102037208	Not Available	680	Open in IMG/M
3300016294\|Ga0182041_10438971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	1119	Open in IMG/M
3300016319\|Ga0182033_10072499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2432	Open in IMG/M
3300016341\|Ga0182035_11888461	Not Available	542	Open in IMG/M
3300016357\|Ga0182032_11053910	All Organisms → cellular organisms → Bacteria → Terrabacteria group	696	Open in IMG/M
3300016357\|Ga0182032_11382193	Not Available	609	Open in IMG/M
3300016371\|Ga0182034_10230041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1451	Open in IMG/M
3300017924\|Ga0187820_1157795	Not Available	687	Open in IMG/M
3300018433\|Ga0066667_10976485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	730	Open in IMG/M
3300026335\|Ga0209804_1215508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	776	Open in IMG/M
3300031544\|Ga0318534_10879238	Not Available	502	Open in IMG/M
3300031545\|Ga0318541_10497493	Not Available	682	Open in IMG/M
3300031546\|Ga0318538_10560079	Not Available	620	Open in IMG/M
3300031546\|Ga0318538_10655925	Not Available	569	Open in IMG/M
3300031564\|Ga0318573_10418173	Not Available	721	Open in IMG/M
3300031572\|Ga0318515_10230563	Not Available	993	Open in IMG/M
3300031573\|Ga0310915_10213244	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300031640\|Ga0318555_10026595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2781	Open in IMG/M
3300031681\|Ga0318572_10403048	Not Available	813	Open in IMG/M
3300031724\|Ga0318500_10266271	Not Available	834	Open in IMG/M
3300031744\|Ga0306918_10385431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1091	Open in IMG/M
3300031751\|Ga0318494_10815383	Not Available	547	Open in IMG/M
3300031769\|Ga0318526_10022825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2208	Open in IMG/M
3300031778\|Ga0318498_10417711	Not Available	595	Open in IMG/M
3300031781\|Ga0318547_10736787	Not Available	613	Open in IMG/M
3300031781\|Ga0318547_10801648	Not Available	587	Open in IMG/M
3300031792\|Ga0318529_10225001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	872	Open in IMG/M
3300031793\|Ga0318548_10527895	Not Available	576	Open in IMG/M
3300031795\|Ga0318557_10378468	Not Available	651	Open in IMG/M
3300031795\|Ga0318557_10498411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea diastatica	559	Open in IMG/M
3300031797\|Ga0318550_10398428	Not Available	666	Open in IMG/M
3300031805\|Ga0318497_10544691	Not Available	650	Open in IMG/M
3300031831\|Ga0318564_10044263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1928	Open in IMG/M
3300031831\|Ga0318564_10060031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1665	Open in IMG/M
3300031833\|Ga0310917_10940417	Not Available	581	Open in IMG/M
3300031835\|Ga0318517_10412970	Not Available	610	Open in IMG/M
3300031846\|Ga0318512_10481434	Not Available	628	Open in IMG/M
3300031860\|Ga0318495_10186781	Not Available	934	Open in IMG/M
3300031860\|Ga0318495_10349252	Not Available	655	Open in IMG/M
3300031894\|Ga0318522_10178727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	802	Open in IMG/M
3300031896\|Ga0318551_10228137	Not Available	1036	Open in IMG/M
3300031896\|Ga0318551_10412978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	768	Open in IMG/M
3300031896\|Ga0318551_10445968	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300031896\|Ga0318551_10474453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	716	Open in IMG/M
3300031896\|Ga0318551_10892965	Not Available	518	Open in IMG/M
3300031942\|Ga0310916_10060202	Not Available	2936	Open in IMG/M
3300031945\|Ga0310913_10215759	Not Available	1343	Open in IMG/M
3300031945\|Ga0310913_10699656	Not Available	717	Open in IMG/M
3300031945\|Ga0310913_11033237	Not Available	575	Open in IMG/M
3300031945\|Ga0310913_11278195	Not Available	509	Open in IMG/M
3300031954\|Ga0306926_10110721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3376	Open in IMG/M
3300031954\|Ga0306926_12188816	Not Available	616	Open in IMG/M
3300032008\|Ga0318562_10393929	Not Available	805	Open in IMG/M
3300032009\|Ga0318563_10352063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	797	Open in IMG/M
3300032052\|Ga0318506_10261185	Not Available	767	Open in IMG/M
3300032065\|Ga0318513_10479822	Not Available	608	Open in IMG/M
3300032067\|Ga0318524_10321552	Not Available	801	Open in IMG/M
3300032076\|Ga0306924_10109907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3126	Open in IMG/M
3300032076\|Ga0306924_10133584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2832	Open in IMG/M
3300032076\|Ga0306924_12036063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	591	Open in IMG/M
3300032090\|Ga0318518_10020309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2920	Open in IMG/M
3300032090\|Ga0318518_10382709	Not Available	722	Open in IMG/M
3300032770\|Ga0335085_11160851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	823	Open in IMG/M
3300032783\|Ga0335079_10013866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9219	Open in IMG/M
3300032805\|Ga0335078_12039255	Not Available	612	Open in IMG/M
3300032805\|Ga0335078_12583289	Not Available	521	Open in IMG/M
3300032828\|Ga0335080_10488477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1309	Open in IMG/M
3300032828\|Ga0335080_11346332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	712	Open in IMG/M
3300032829\|Ga0335070_10353063	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300032829\|Ga0335070_10672061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	970	Open in IMG/M
3300033158\|Ga0335077_10854828	Not Available	921	Open in IMG/M
3300033158\|Ga0335077_11291752	Not Available	709	Open in IMG/M
3300033158\|Ga0335077_11937685	Not Available	549	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.13%
Host-Associated	Host-Associated	1.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.39%
Aquatic	Environmental → Aquatic	3.74%
Plants	Host-Associated → Plants	1.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.39%
Freshwater	Environmental → Aquatic → Freshwater	2.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.87%
Sediment	Environmental → Aquatic → Sediment	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.28%
Loam	Environmental → Terrestrial → Soil → Loam	6.54%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	54.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.87%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	42.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.21%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	10.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.80%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.87%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1017532982	3300004092	Bog Forest Soil	VGGYCLARARCPVLAIPPPPPARELGHSRLAWLFRHRPLTPEQVLRGQRRPAT*
Ga0062388_1027976302	3300004635	Bog Forest Soil	VGGYCLARARCPVLAIPPPPPARELGHSRLAWLFRHRRLTLEQVLRGQRRPAI*
Ga0066685_101293721	3300005180	Soil	RYCLAHARCPVLTVPPPALTREISHGLLRWMFWHRPLTPDRILQDQGKAAA*
Ga0066388_1010783491	3300005332	Tropical Forest Soil	RVSRYCLARAGCPVLAVPPPALASELWRDRLVRMLRHRPLTIEQILGNRPRPAT*
Ga0070713_1011670511	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	SRYCLAHALCPVLAVPPPALADELRRTRLPWAFWHRPLTPQQILGDQPRPAA*
Ga0070710_111231552	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LTMCWLWALAAGAAGRLAFSKVGRYCLAYAQCPVVAIPPPALAGELRHGRLAWMFWRRSLAPEQVLRDHGRPAA*
Ga0066682_106768722	3300005450	Soil	CLAHARCPVLAVPPPALAQELGHGLLGWVFWHRTLTPDRVLRDRGIASA*
Ga0070699_1005264042	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	HADCPVLAVPPPALAGELGHGLLGWVFWHRPLTPDQVLRDRGRAAA*
Ga0066699_106164781	3300005561	Soil	RYCLAHARCPVLAIPPPPPARELGHSRLAWLFWHRPLTPEQVLRDQRRPAA*
Ga0066903_1049176682	3300005764	Tropical Forest Soil	SRYCLAHAQCPVLAIPPPALARELARGRLAWVFWHRPLTPERVLRDHPKPAA*
Ga0066903_1080101452	3300005764	Tropical Forest Soil	VSRYCLAHACCPVLAIPPPAPARELGHRTLGWVFWHRPLTPDQVLDDRGKAAA*
Ga0066903_1080726331	3300005764	Tropical Forest Soil	ELARELAHGRRAWVFWHRPLTPDQILRDQPKPAA*
Ga0075017_1010629502	3300006059	Watersheds	MAFSKASRYCLAHAQCPVVAISPPALVSELGHGRLAWAFWRRSLTPEQVLRDQGRPAA*
Ga0075435_1013853231	3300007076	Populus Rhizosphere	VSRYCLAHAQCPVLAILPPALAHELAHARLAWLLWHRPLTPERILRDQPKPAA*
Ga0099829_105284112	3300009038	Vadose Zone Soil	SRYCLARAQCPVLAVPPPELARELRHGRLAWVFWHRSLTPERVLRDQTRPAA*
Ga0099828_109414962	3300009089	Vadose Zone Soil	SRYCLSHAQCPVLAIPPPALAQEVSHGPRGWVFWHRTLTLDRILSDPGGKSAA*
Ga0126380_106554891	3300010043	Tropical Forest Soil	TRYCVAHAQCPVLAIPPPALARELAHSRLAWMFWHRPLTPEQILRDQPKPAA*
Ga0126380_106785242	3300010043	Tropical Forest Soil	MIFSKVGRHCLAHAQCPVLAIPPPVLAQDLRHGRLAWLFWHRPLTPEQVLRDQPKPAA*
Ga0126380_122531902	3300010043	Tropical Forest Soil	AIPPPALAHDLRHGRLAWLFWRRPLTPEQILGDQPKPAA*
Ga0126373_104795193	3300010048	Tropical Forest Soil	LAIPPPALARELRHDRLAWVFWHRPLTPERVLRDQPKPAT*
Ga0126373_114741381	3300010048	Tropical Forest Soil	AYSRVSRYCLANAQCPVVAIPPPALARELRHGHLGWVFWHRPLTPEQILRDQPKPAS*
Ga0134080_103544181	3300010333	Grasslands Soil	VIAVPPPELAGELRHGRLAWVFWHRPLTPEQILRDQDRPAA*
Ga0126378_131080061	3300010361	Tropical Forest Soil	VVAIPPPALAGELGHGRLAWAFRRRSLTPEQVLRDHDRPAA*
Ga0126377_124598131	3300010362	Tropical Forest Soil	SRYCLAHAQCPVLAIPPPALARELSHSRLAWVFWHRQLTPEQILRDQPKPAT*
Ga0126379_120263021	3300010366	Tropical Forest Soil	ALARIISCKVSRYCLAHADCPVLAIPPPALAGELRHGPLEWVFWHRRLTPDQVLRDRGKAAA*
Ga0136449_1043677562	3300010379	Peatlands Soil	CPVLAIPPPPPARELGHSRLAWLFWHRPLTPEQVLRDQRRPAA*
Ga0137365_107505901	3300012201	Vadose Zone Soil	PVVAIPPPVLASELRHGRFAWLFRHRPLTPEQILRDQPKPAT*
Ga0137363_112373061	3300012202	Vadose Zone Soil	PVIAVPPPALAREVRHGPLGWALWHRTLTADRVLRDQGRAAT*
Ga0137378_109927611	3300012210	Vadose Zone Soil	HAQCPVLAVPPPALAREFGRGRLARVFWRRSLTPERVLGDQGRPAA*
Ga0137386_103658561	3300012351	Vadose Zone Soil	PVLAVPPPALARELGHGLLGWVFWHRPLTPDRVLRDRGEAAA*
Ga0137386_111699111	3300012351	Vadose Zone Soil	VAIPPPALVGELGHGRLAWAFWRRSLTPEQVLRGRDRPAA*
Ga0137385_108918151	3300012359	Vadose Zone Soil	IPPPLPARELGHSRLAWLFWHRPLTPEQVLRDQRRPAT*
Ga0126369_103468392	3300012971	Tropical Forest Soil	AFARVARYCVARAQCPVLAVPPPALARELGHGRLAWAYWHRPLTAEQILRDPHRPAA*
Ga0126369_124945411	3300012971	Tropical Forest Soil	LGRLAFAKVSRYCLAHAQCPVVAIPPPALAGELGHGRLAWAFWRRSLTPEQVLRDHDRPAA*
Ga0132256_1020372082	3300015372	Arabidopsis Rhizosphere	PVLASELRHGRLGWLYWHRPLTPERILRDQPKPAA*
Ga0182041_104389712	3300016294	Soil	RPALARELGHGRLAWVYWHRPLTAEQILRDPHRPAV
Ga0182033_100724991	3300016319	Soil	AHAQSPVLAIPPPALARELRQGRLAWRFWHRSLTPEQVLRDQPKPAT
Ga0182035_118884611	3300016341	Soil	AHAQCPVLAIPPPELARELAHDRLAWVFWHRPLTPERILRDQPKPPPERQGRAP
Ga0182032_110539101	3300016357	Soil	PVLAIPPPPLARELRHSRLAWKLRHRPLTAEQILSDQPKPAA
Ga0182032_113821931	3300016357	Soil	HAQCPVVAIPPPALASELGHGHLAWAFWRRSLTPEQVLRDHDRPAA
Ga0182034_102300411	3300016371	Soil	PPPALARKLRHRRLAWLFWHGPLTPEQILRDQPTA
Ga0187820_11577952	3300017924	Freshwater Sediment	YCVAHAQCPVLAVPPSALARGLGHGPLARVLWHRSLTTEQILRDQGRPAA
Ga0066667_109764852	3300018433	Grasslands Soil	YCLAHARCPVLAVPPPALAQELGHGLLGWVFWHRTLTPDRVLRDRGIASA
Ga0209804_12155081	3300026335	Soil	LAIPPPALARELGHIRLARQFWHRTVTPERVLRNGGTAA
Ga0318534_108792382	3300031544	Soil	PPLARELARSRLARVFWHRSLTPEQVLRDQPKPAA
Ga0318541_104974932	3300031545	Soil	RVSRYCLAHAQCPVLAIPPPALARELRHDRLAWLFWHRPLTAERVLRDQPKPAT
Ga0318538_105600791	3300031546	Soil	CPVLAIPPPELARELAHGRAWVFWHRPLTPERLLRDQPKPAA
Ga0318538_106559251	3300031546	Soil	CPVVAIPPPALASELGHGHLAWAFWRRSLTPEQVLRDHDRPAA
Ga0318573_104181732	3300031564	Soil	ANAQCPVLAIPPPALARELRHDRLAWLFWHRPLTAERVLRDQPKPAT
Ga0318515_102305631	3300031572	Soil	YCLAHAQCPVLAIPPPALARELRHDRLAWLFWHRPLTAERVLRDQPKPAT
Ga0310915_102132441	3300031573	Soil	FSRVSRYCLAHAQCPVLAIPPPALARELRHDRLAWVFWHRPLTPERVLRDQPKPAT
Ga0318555_100265953	3300031640	Soil	CLAHAQCPVLAIPPPALARELRHDRLAWVFWHRPLTPERVLRDQPKPAT
Ga0318572_104030481	3300031681	Soil	AQCPVLAVPPPALARELGHGRLAWVYWHRPLTAEQILRDPHRPAA
Ga0318500_102662711	3300031724	Soil	VLAIPPPALACDLRHARLAWVFWHRPLTAEQVLRDQPKPAV
Ga0306918_103854311	3300031744	Soil	IPPPALARELRHDRLARLFWHRPLTPERVLRDQPKPAT
Ga0318494_108153831	3300031751	Soil	SRVSGYCVAHAQCPVMAVAPPALARELGRGRLAWAIRRRSLTPERVLHDRDRPAA
Ga0318526_100228251	3300031769	Soil	LAIPPPALARELRHDRLAWVFWHRPLTPERVLRDQPKPAT
Ga0318498_104177111	3300031778	Soil	FSRVSGYCVAHAQCPVMAVPPPALARELGRGRLAWAIRRRSLTPEQVLHDRDRPAA
Ga0318547_107367871	3300031781	Soil	VLAVPPPALARELRHGRLAWVYRHRPLTAEQIFRDPHRPAA
Ga0318547_108016481	3300031781	Soil	LAHAQCPVLAIPPPELARELAHDRLAWVFWHRPLTPERILRDQPKPPPERQGRAP
Ga0318529_102250011	3300031792	Soil	PPPALARELGHGRLAWAYWHRPLTAEQILRDPHRPAA
Ga0318548_105278951	3300031793	Soil	LARMACSRVSCYCLAHAQCPILAIPPPALARKLRHRRLAWLFWHGPLTPEQILRDQPTA
Ga0318557_103784682	3300031795	Soil	SKVSRYCLAHAQSPVLAIPPPALARELRQGRLAWRFWHRSLTPEQILRDQPKPAT
Ga0318557_104984111	3300031795	Soil	VSRYCLAHARCPVIAVPPPALARELRHGLLAWAFWRRSLTPEQVLRDKD
Ga0318550_103984282	3300031797	Soil	FRGVLARELRHGRLAWVYRHRPLTAEQIFRDPHRPAA
Ga0318497_105446912	3300031805	Soil	FSRVSRYGLAHAQCPVLAIPPPALARELRHDRLAWLFWHRPLTAERVLRDQPKPAT
Ga0318564_100442631	3300031831	Soil	VLAVPPPALARELGHGRLAWAYWHRPLTAEQILRDPHRPAA
Ga0318564_100600311	3300031831	Soil	CQCPVLAIPPPPLARELRHSRLAWKLRHRPLTAEQILSDQPKPAA
Ga0310917_109404171	3300031833	Soil	RVSGYCVAHAQCPVLAVPPPALAHELRHGRLAWAFWRRSLTPEQVLRDRDRPAA
Ga0318517_104129701	3300031835	Soil	QCPVLAIPPPELARELAHDRLAWVFWHRPLTPERILRDQPKPAA
Ga0318512_104814341	3300031846	Soil	VTRYCVARAQCPVLAVPPPALARELGHGRLAWVYWHRPLTAEQILRDPHRPAA
Ga0318495_101867812	3300031860	Soil	LAHAQCPVLAIPPPALARELRHDRLAWVFWHRPLTPERVLRDQPKPAT
Ga0318495_103492521	3300031860	Soil	VSRYCLAHAQCPVMAVPPPALARELSRSRLAWVFRRRSLTPEQVLRDQKRPAA
Ga0318522_101787271	3300031894	Soil	ARVARYCVARAQCPVLAVPPPALARELGHGRLAWAYWHRPLTAEQILRDPHRPAA
Ga0318551_102281371	3300031896	Soil	AHAQCPVLAIPPPELARELAHCRRGWVFWHRPLTPERILRDQPKPAA
Ga0318551_104129782	3300031896	Soil	PWMAFAKVARYCVARAQCPVLAVPPSALARELGHGRLAWAFRHRPLTTEQILRDPHRPAA
Ga0318551_104459681	3300031896	Soil	CLAHARCPVIAVPPPALARELRHGLLAWAFWRRPLTAEQVLRDQNKPAA
Ga0318551_104744531	3300031896	Soil	CLAHAQCPVLAIPPPELARELAHGRRAWAFWHRPLTPERILRDQPKPAA
Ga0318551_108929651	3300031896	Soil	RVSRYCLAHAQCPVLAIPPPALARELRHDRLAWVFWHRPLTPERVLRDQPKPAT
Ga0310916_100602022	3300031942	Soil	PRMAFARVTRYCVARAQCPVLAVPPPALARELGHGRLAWVYWHRPLTAEQILRDPHRPAV
Ga0310913_102157592	3300031945	Soil	CVARAQCPVLAVPPSALARELGHGRLAWVYWHRPLTAEQILRDPHRPAV
Ga0310913_106996561	3300031945	Soil	VSRYCLAHAQCPVLAIPPPALARELRHDRLAWLFWHRPLTAERVLRDQPKPAT
Ga0310913_110332371	3300031945	Soil	LAHAQSPVLAIPPPALARELRQGRLAWRFWHRSLTPEQILRDQPKPAT
Ga0310913_112781951	3300031945	Soil	YCVARAQCPVLAVPPSALARELGHGRLAWAFRHRPLTTEQILRDPHRPAA
Ga0306926_101107214	3300031954	Soil	AHAQCPVLAIPPPALARELRHDRLAWVFWHRPLTPERVLRDQPKPAT
Ga0306926_121888162	3300031954	Soil	LAIPPPELARELAHGRAWVFWHRPLTPERLLRDQPKPAA
Ga0318562_103939291	3300032008	Soil	VLAIPPPALARELRHDRLAWLFWHRPLTAERVLRDQPKPAT
Ga0318563_103520631	3300032009	Soil	ARYCVARAQCPVLAVPPSALARELGHGRLAWAFRHRPLTTEQILRDPHRPAA
Ga0318506_102611852	3300032052	Soil	MAFSKVSRYCLAHAQSPVLAIPPPALARELRQGRLAWRFWHRSLTPEQILRDQPKPAT
Ga0318513_104798222	3300032065	Soil	LVVPPPALARELGRGRLAWAIRRRSLTPEQVLRDRDRPAA
Ga0318524_103215521	3300032067	Soil	LAHAQCPVLAIPPPALARELRQGRLAWRFWHRSLTPEQVLRDQPKPAT
Ga0306924_101099071	3300032076	Soil	AFSKVSRYCLAHAQSPVLAIPPPALARELRQGRLAWRFWHRSLTPEQILRDQPKPAT
Ga0306924_101335841	3300032076	Soil	CPVLAIPPPPLARELRHSRLAWKLRHRPLTAEQILSDQPKPAT
Ga0306924_120360631	3300032076	Soil	VRSGSRAVSRYCLAHAQCPVLIVPPDALARETGHGRLAWLVWRRALTPARVVRDQHKPASKS
Ga0318518_100203093	3300032090	Soil	QSPVLAIPPPALARELRQGRLAWRFWHRSLTPEQILRDQPKPAT
Ga0318518_103827092	3300032090	Soil	HAQCPVLAIPPPELARELAHGRAWVFWHRPLTPERLLRDQPKPAA
Ga0335085_111608512	3300032770	Soil	PALASELGHGHLAWAFWRRSLTPEQVLRDHDRPAA
Ga0335079_100138662	3300032783	Soil	MLACDPVPEYAQCPVLAVPPPDLARELGHSRLARVFWRRSLTLERMLGDQGRPAA
Ga0335078_120392551	3300032805	Soil	SRYCVAHARCPVVAVPPPALARELSHGRLVWAFRHRSLTLERVLGDRGRPAV
Ga0335078_125832892	3300032805	Soil	QCPVMAVPPPALARELRHGRLARAFWRRSLTPEQILRDQGRPAA
Ga0335080_104884771	3300032828	Soil	SRVSRYCLARARCPVMAIPPPALACELGHSRLAWVFWRRSLTPEQVLRDQDRPAA
Ga0335080_113463321	3300032828	Soil	VLAIPPPALARELAHSRLAWAFWHRPLTPEQILRDQPKPAA
Ga0335070_103530633	3300032829	Soil	RGTLGRLAFSKVSRYCLAHAQCSVVAIPPPGLAGELGHGRLAWAFWRRSLTPEQVLRDHDRPTA
Ga0335070_106720612	3300032829	Soil	SVVAIPPPGLAGELGHGRLAWAFWRRSLTPEQVLRDHDRPAA
Ga0335077_108548281	3300033158	Soil	AIPPPALAHDLRHGRLAWLFWHRPLTPEQVLRDQPNPAA
Ga0335077_112917521	3300033158	Soil	RYCLARAQCPVVAIPPPALASELGHGRLAWAFRRRSLTPEQVLRDHGRPAA
Ga0335077_119376851	3300033158	Soil	ACAKVARYCLARAQCPVLAVPPPALTREIGHGRLASRYWHRPLTTEQILRDQRRPAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091438

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences