Metagenome Family F091480

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091480
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	79 residues
Representative Sequence	MRDLHVYVEPSGSGARGQRAAFYSRRADGPFYRWLYAEGSGRWRYSRVSLDRLTLRMLCVAPWEAVPDALRSRLGEHYLE
Number of Associated Samples	67
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.75 %
% of genes near scaffold ends (potentially truncated)	14.02 %
% of genes from short scaffolds (< 2000 bps)	78.50 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.458 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (20.561 % of family members)
Environment Ontology (ENVO)	Unclassified (28.037 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (34.579 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.44% β-sheet: 24.07% Coil/Unstructured: 56.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.47.1.1: Trypsin-like serine proteases	d2qa9e_	2qa9	0.59
b.47.1.1: Trypsin-like serine proteases	d1ssxa_	1ssx	0.57
b.34.12.0: BAH domain	d4kuia_	4kui	0.57
d.20.1.1: UBC-like	d6s98a_	6s98	0.57
b.60.1.1: Lipocalins	d3kffa_	3kff	0.56

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF01192	RNA_pol_Rpb6	9.35
PF13451	zf-trcl	3.74
PF00076	RRM_1	2.80
PF00487	FA_desaturase	2.80
PF13545	HTH_Crp_2	1.87
PF13426	PAS_9	0.93
PF13439	Glyco_transf_4	0.93
PF00805	Pentapeptide	0.93
PF14870	PSII_BNR	0.93
PF00589	Phage_integrase	0.93
PF13517	FG-GAP_3	0.93
PF02225	PA	0.93
PF06745	ATPase	0.93
PF07676	PD40	0.93
PF14534	DUF4440	0.93
PF13709	DUF4159	0.93
PF08241	Methyltransf_11	0.93
PF14714	KH_dom-like	0.93
PF12708	Pectate_lyase_3	0.93
PF00459	Inositol_P	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1758	DNA-directed RNA polymerase, subunit K/omega	Transcription [K]	9.35
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	2.80
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	2.80
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.46 %
Viruses	superkingdom	All Organisms → Viruses	6.54 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.54 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	79.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.54 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.54 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.93 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.54 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.54 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002896\|JGI24802J43972_1017603	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300003324\|soilH2_10290209	All Organisms → Viruses → Predicted Viral	1547	Open in IMG/M
3300004016\|Ga0058689_10002648	All Organisms → cellular organisms → Bacteria	3149	Open in IMG/M
3300005329\|Ga0070683_101669368	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300005364\|Ga0070673_101804680	All Organisms → cellular organisms → Bacteria → Acidobacteria	579	Open in IMG/M
3300006876\|Ga0079217_10927901	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300006876\|Ga0079217_11541520	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300006918\|Ga0079216_10157402	All Organisms → cellular organisms → Bacteria → Acidobacteria	1192	Open in IMG/M
3300007790\|Ga0105679_10028827	All Organisms → cellular organisms → Bacteria	6564	Open in IMG/M
3300007790\|Ga0105679_10230105	All Organisms → cellular organisms → Bacteria → Acidobacteria	1073	Open in IMG/M
3300007790\|Ga0105679_10543054	All Organisms → Viruses → Predicted Viral	1253	Open in IMG/M
3300009789\|Ga0126307_10273746	All Organisms → cellular organisms → Bacteria → Acidobacteria	1357	Open in IMG/M
3300009789\|Ga0126307_10305481	All Organisms → cellular organisms → Bacteria → Acidobacteria	1280	Open in IMG/M
3300009789\|Ga0126307_10833988	All Organisms → cellular organisms → Bacteria → Acidobacteria	744	Open in IMG/M
3300009840\|Ga0126313_10488027	All Organisms → cellular organisms → Bacteria → Acidobacteria	985	Open in IMG/M
3300010036\|Ga0126305_10225671	All Organisms → cellular organisms → Bacteria → Acidobacteria	1196	Open in IMG/M
3300010037\|Ga0126304_10288629	All Organisms → cellular organisms → Bacteria → Acidobacteria	1085	Open in IMG/M
3300010039\|Ga0126309_10141198	All Organisms → cellular organisms → Bacteria → Acidobacteria	1285	Open in IMG/M
3300010039\|Ga0126309_10442661	All Organisms → cellular organisms → Bacteria → Acidobacteria	787	Open in IMG/M
3300010039\|Ga0126309_11020592	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300010041\|Ga0126312_11098764	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300010042\|Ga0126314_10357881	All Organisms → cellular organisms → Bacteria → Acidobacteria	1048	Open in IMG/M
3300010042\|Ga0126314_10430993	All Organisms → cellular organisms → Bacteria → Acidobacteria	952	Open in IMG/M
3300010044\|Ga0126310_10290874	All Organisms → cellular organisms → Bacteria → Acidobacteria	1120	Open in IMG/M
3300010044\|Ga0126310_10482894	All Organisms → cellular organisms → Bacteria → Acidobacteria	902	Open in IMG/M
3300010044\|Ga0126310_11104706	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300010045\|Ga0126311_10001396	All Organisms → cellular organisms → Bacteria	11725	Open in IMG/M
3300010045\|Ga0126311_10814203	All Organisms → cellular organisms → Bacteria → Acidobacteria	754	Open in IMG/M
3300010045\|Ga0126311_11136619	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300010045\|Ga0126311_11723711	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300010166\|Ga0126306_10332098	All Organisms → cellular organisms → Bacteria → Acidobacteria	1177	Open in IMG/M
3300010166\|Ga0126306_10540501	All Organisms → cellular organisms → Bacteria → Acidobacteria	924	Open in IMG/M
3300010166\|Ga0126306_11503394	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300012212\|Ga0150985_111781751	All Organisms → cellular organisms → Bacteria → Acidobacteria	1495	Open in IMG/M
3300012212\|Ga0150985_117138899	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300012469\|Ga0150984_109172893	All Organisms → cellular organisms → Bacteria → Acidobacteria	1541	Open in IMG/M
3300014487\|Ga0182000_10010821	All Organisms → Viruses → Predicted Viral	2221	Open in IMG/M
3300014488\|Ga0182001_10000327	All Organisms → cellular organisms → Bacteria	9985	Open in IMG/M
3300014488\|Ga0182001_10031882	All Organisms → cellular organisms → Bacteria → Acidobacteria	1314	Open in IMG/M
3300014488\|Ga0182001_10067034	All Organisms → cellular organisms → Bacteria → Acidobacteria	1020	Open in IMG/M
3300014488\|Ga0182001_10119086	All Organisms → cellular organisms → Bacteria → Acidobacteria	852	Open in IMG/M
3300018432\|Ga0190275_10440478	All Organisms → Viruses → Predicted Viral	1323	Open in IMG/M
3300018432\|Ga0190275_13041551	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300018465\|Ga0190269_10009313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	4414	Open in IMG/M
3300018465\|Ga0190269_10130589	All Organisms → cellular organisms → Bacteria → Acidobacteria	1273	Open in IMG/M
3300018465\|Ga0190269_11562034	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300018466\|Ga0190268_10004191	All Organisms → cellular organisms → Bacteria	3320	Open in IMG/M
3300018466\|Ga0190268_10111795	All Organisms → Viruses → Predicted Viral	1300	Open in IMG/M
3300018466\|Ga0190268_10167162	All Organisms → cellular organisms → Bacteria → Acidobacteria	1150	Open in IMG/M
3300018466\|Ga0190268_10885689	All Organisms → cellular organisms → Bacteria → Acidobacteria	692	Open in IMG/M
3300018466\|Ga0190268_10957974	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300018890\|Ga0193595_1012659	All Organisms → cellular organisms → Bacteria → Acidobacteria	3049	Open in IMG/M
3300018920\|Ga0190273_10068249	All Organisms → cellular organisms → Bacteria → Acidobacteria	1872	Open in IMG/M
3300018920\|Ga0190273_10741854	All Organisms → cellular organisms → Bacteria → Acidobacteria	769	Open in IMG/M
3300018946\|Ga0193599_1017939	All Organisms → cellular organisms → Bacteria → Acidobacteria	2652	Open in IMG/M
3300019377\|Ga0190264_11936375	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300019767\|Ga0190267_10128394	All Organisms → cellular organisms → Bacteria → Acidobacteria	1066	Open in IMG/M
3300019767\|Ga0190267_10401405	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300019767\|Ga0190267_10666533	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300019767\|Ga0190267_10881214	All Organisms → cellular organisms → Bacteria → Acidobacteria	609	Open in IMG/M
3300019767\|Ga0190267_11300415	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300020146\|Ga0196977_1043954	All Organisms → cellular organisms → Bacteria → Acidobacteria	1069	Open in IMG/M
3300020215\|Ga0196963_10201949	All Organisms → cellular organisms → Bacteria → Acidobacteria	860	Open in IMG/M
3300021265\|Ga0213906_100965	All Organisms → cellular organisms → Bacteria → Acidobacteria	1292	Open in IMG/M
3300021384\|Ga0213876_10000054	All Organisms → cellular organisms → Bacteria	136221	Open in IMG/M
3300021445\|Ga0182009_10212960	All Organisms → cellular organisms → Bacteria → Acidobacteria	945	Open in IMG/M
3300024430\|Ga0196962_10133893	All Organisms → cellular organisms → Bacteria → Acidobacteria	780	Open in IMG/M
3300025944\|Ga0207661_11491120	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300027718\|Ga0209795_10078213	All Organisms → cellular organisms → Bacteria → Acidobacteria	962	Open in IMG/M
3300027750\|Ga0209461_10000974	All Organisms → cellular organisms → Bacteria	5965	Open in IMG/M
3300028778\|Ga0307288_10190129	All Organisms → cellular organisms → Bacteria → Acidobacteria	788	Open in IMG/M
3300030510\|Ga0268243_1007502	All Organisms → Viruses → Predicted Viral	1956	Open in IMG/M
3300030513\|Ga0268242_1000164	All Organisms → cellular organisms → Bacteria	11722	Open in IMG/M
3300031548\|Ga0307408_100663341	All Organisms → cellular organisms → Bacteria → Acidobacteria	934	Open in IMG/M
3300031731\|Ga0307405_11969097	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300031852\|Ga0307410_11981843	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300032126\|Ga0307415_100695349	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M
3300034000\|Ga0334918_031058	All Organisms → cellular organisms → Bacteria → Acidobacteria	747	Open in IMG/M
3300034002\|Ga0334920_001485	All Organisms → cellular organisms → Bacteria	7794	Open in IMG/M
3300034005\|Ga0334930_053714	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300034005\|Ga0334930_070333	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300034006\|Ga0334934_004643	All Organisms → cellular organisms → Bacteria → Acidobacteria	1880	Open in IMG/M
3300034006\|Ga0334934_015270	All Organisms → Viruses → Predicted Viral	1032	Open in IMG/M
3300034008\|Ga0334942_009117	All Organisms → cellular organisms → Bacteria → Acidobacteria	2568	Open in IMG/M
3300034009\|Ga0334944_010786	All Organisms → cellular organisms → Bacteria → Acidobacteria	1728	Open in IMG/M
3300034009\|Ga0334944_024063	All Organisms → cellular organisms → Bacteria → Acidobacteria	1159	Open in IMG/M
3300034009\|Ga0334944_079999	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300034024\|Ga0334927_005428	All Organisms → cellular organisms → Bacteria → Acidobacteria	4358	Open in IMG/M
3300034025\|Ga0334940_001278	All Organisms → cellular organisms → Bacteria → Acidobacteria	7278	Open in IMG/M
3300034026\|Ga0334946_000175	All Organisms → cellular organisms → Bacteria	28827	Open in IMG/M
3300034026\|Ga0334946_000445	All Organisms → cellular organisms → Bacteria	8645	Open in IMG/M
3300034026\|Ga0334946_002975	All Organisms → cellular organisms → Bacteria → Acidobacteria	2593	Open in IMG/M
3300034026\|Ga0334946_038441	All Organisms → cellular organisms → Bacteria → Acidobacteria	799	Open in IMG/M
3300034030\|Ga0334952_000323	All Organisms → cellular organisms → Bacteria	27509	Open in IMG/M
3300034135\|Ga0334929_000157	All Organisms → cellular organisms → Bacteria	31141	Open in IMG/M
3300034137\|Ga0334943_017548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1346	Open in IMG/M
3300034137\|Ga0334943_112783	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300034143\|Ga0334961_044862	All Organisms → cellular organisms → Bacteria → Acidobacteria	763	Open in IMG/M
3300034145\|Ga0334963_000317	All Organisms → cellular organisms → Bacteria	20352	Open in IMG/M
3300034172\|Ga0334913_024865	All Organisms → cellular organisms → Bacteria → Acidobacteria	1318	Open in IMG/M
3300034221\|Ga0334937_039602	All Organisms → cellular organisms → Bacteria → Acidobacteria	1275	Open in IMG/M
3300034221\|Ga0334937_068004	All Organisms → cellular organisms → Bacteria → Acidobacteria	977	Open in IMG/M
3300034376\|Ga0334923_019795	All Organisms → cellular organisms → Bacteria → Acidobacteria	1405	Open in IMG/M
3300034377\|Ga0334931_000059	All Organisms → cellular organisms → Bacteria → Acidobacteria	84132	Open in IMG/M
3300034391\|Ga0334917_045448	All Organisms → cellular organisms → Bacteria → Acidobacteria	785	Open in IMG/M
3300034402\|Ga0334960_029447	All Organisms → cellular organisms → Bacteria → Acidobacteria	740	Open in IMG/M
3300034687\|Ga0334905_010532	All Organisms → cellular organisms → Bacteria → Acidobacteria	1322	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.78%
Host-Associated	Host-Associated	11.21%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.78%
Plants	Host-Associated → Plants	11.21%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.87%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.87%
Roots	Host-Associated → Plants → Roots	0.93%
Phylloplane	Host-Associated → Plants → Phylloplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.42%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	14.02%
Sand	Environmental → Terrestrial → Soil → Sand	7.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.74%
Loam	Environmental → Terrestrial → Soil → Loam	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.87%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	1.87%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.66%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	14.02%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	14.02%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	7.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	20.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.69%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	13.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.41%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	8.41%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	5.61%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	5.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.87%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.87%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	1.87%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Soil	0.93%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.93%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002896	Soil microbial communities from Manhattan, Kansas, USA - Sample 300um Nextera	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018890	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, bundles v1	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300018946	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020146	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13C	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300021265	Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hobet_Shaw_3	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030513	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300034000	Biocrust microbial communities from Mojave Desert, California, United States - 14HMC	Environmental	Open in IMG/M
3300034002	Biocrust microbial communities from Mojave Desert, California, United States - 16HMC	Environmental	Open in IMG/M
3300034005	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 26HNS	Environmental	Open in IMG/M
3300034006	Biocrust microbial communities from Mojave Desert, California, United States - 30SMC	Environmental	Open in IMG/M
3300034008	Biocrust microbial communities from Mojave Desert, California, United States - 38SMC	Environmental	Open in IMG/M
3300034009	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 40SMS	Environmental	Open in IMG/M
3300034024	Biocrust microbial communities from Mojave Desert, California, United States - 23HNC	Environmental	Open in IMG/M
3300034025	Biocrust microbial communities from Mojave Desert, California, United States - 36SMC	Environmental	Open in IMG/M
3300034026	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 42SMS	Environmental	Open in IMG/M
3300034030	Biocrust microbial communities from Mojave Desert, California, United States - 48SNC	Environmental	Open in IMG/M
3300034135	Biocrust microbial communities from Mojave Desert, California, United States - 25HNC	Environmental	Open in IMG/M
3300034137	Biocrust microbial communities from Mojave Desert, California, United States - 39SMC	Environmental	Open in IMG/M
3300034143	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 57SNS	Environmental	Open in IMG/M
3300034145	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 59SNS	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M
3300034221	Biocrust microbial communities from Mojave Desert, California, United States - 33SMC	Environmental	Open in IMG/M
3300034376	Biocrust microbial communities from Mojave Desert, California, United States - 19HNC	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M
3300034391	Biocrust microbial communities from Mojave Desert, California, United States - 13HMC	Environmental	Open in IMG/M
3300034402	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 56SNS	Environmental	Open in IMG/M
3300034687	Soil microbial communities from Mojave Desert, California, United States - 1NOC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24802J43972_10176032	3300002896	Soil	MRDLHVYVDSVDPEARDALPAFYSRRADGPYYLWLYAEGPGRWCYSRVSLSRLTLRVLCIARWDAVPTELRDRLVEHYLE*
soilH2_102902096	3300003324	Sugarcane Root And Bulk Soil	MRDLHVYVGPVSFEVRGGQTAFYSRRSDGPYYRWLYAEGAGRWSYSRVNLDRLELRVLCVAHWDAVPTALRDRLGEHYLE*
Ga0058689_100026488	3300004016	Agave	MRDLHVYVEPAGSGAGGERATFYSRRADGPFYRWLYAEGAGRWRYSRVVLDRPTLRVLCLAPWDAVPAALRNRIGEHYLE*
Ga0070683_1016693682	3300005329	Corn Rhizosphere	MRDLRVYIHPLGPGARGQDATFYSQRADGPYYRWVYAEGAGRWRYSRVSLERPELNVLCVARWEAVPAALRDRLGEHYLE*
Ga0070673_1018046802	3300005364	Switchgrass Rhizosphere	MRDLHVYVAPVSTDVCGECNAFYSRRADGPYYRWFYAEGSGRWLYSRVSLDRLALRVLCVARWEAVPTALRARLGEHYLE*
Ga0079217_109279012	3300006876	Agricultural Soil	LSPGRAAAGRRSNTHMRDLHVYIAPLAHEARGEHTSFYTRRADGPYYRWFYAEGSGRWRYSRVSLDRPTLRVLCVARWEAVPTTLRDRLGEHYLE*
Ga0079217_115415201	3300006876	Agricultural Soil	MRDLRVYVNTVGPGARVEGTAFYSRRGDGPYYRWLYAEEPGRWHYSRVNLDRLELRVLCVAPWDAVPDALRARLGEHYLE*
Ga0079216_101574022	3300006918	Agricultural Soil	MRDLHVYIAPVAHEARGEHTSFYTRRADGPYYRWFYAEGSGRWRYSRVSLDRPTLRVLCVARWEAVPTTLRDRLGEHYLE*
Ga0105679_100288277	3300007790	Soil	MRDLRVYISNAGSEGRGHAATFYSQRADGPYYRWVYAEGSGRWRYSRVSLDRFELNVLCVARWDAVPPALRDRLGEHYLE*
Ga0105679_102301054	3300007790	Soil	MRDLHVYTEPLGPDERGGQTAFYSRRADGPYYRWLYAEGAGRWCCSRVRLDRPALRVLCVARWEAVPAALRKSLGEHYLE*
Ga0105679_105430542	3300007790	Soil	MRDLRVYINPAGAGVRGQGETFYSQRADGPYYRWVCAEGSGRWRYSRVSLDRLELNVLCVARWEAVPPALRDRLGEHYLE*
Ga0126307_102737462	3300009789	Serpentine Soil	MRDLHVYVDSIGSEARGEKAAFYTRRADGPYYRWLYAEASGGWGYSRVRLDRPTLRVLCVARWEAVPTTLRKRLGEHYLE*
Ga0126307_103054811	3300009789	Serpentine Soil	MRDLHVYVEHAGSGARGRHAAFYSRRADGPFYRWLDAEGSGRWRYSRVSLDRLTLRMLCVAPWEAVP
Ga0126307_108339883	3300009789	Serpentine Soil	MRDLHVYVEPSGSGARGQRAAFYSRRADGPFYRWLDAEGSGRWCYSRVSLDRLTLRMLCVAPWDAVPAALRNRLGEHYLE*
Ga0126313_104880274	3300009840	Serpentine Soil	VGLNGRGHDVTFYSQRADGPYYRWVYAEGLGRWHYSRVSLDRLELNVLCVARWDAVPPTLRDRLGEHYLE*
Ga0126305_102256713	3300010036	Serpentine Soil	MRDLHVYVEYAAADERGQRAAFYSRRADGPFYRWLDAEGSGRWSYSRVSLDRPALRMLCVAPWEAVPAALRSRLGEHYLE*
Ga0126304_102886292	3300010037	Serpentine Soil	MRDLHVYVEHASPGARGQRAAFYSRRADGPFYRWLDAEGSGRWSYSRVSLDRLTLRMLCVAPWEAVPAALRSRLGEHYLE*
Ga0126309_101411984	3300010039	Serpentine Soil	MRDLHVYVDPLSSGVRGRPAAFYSRRADGPYYRWLYAEGAGRWLYSRVSLDKLALRVLCLARWDSVPTALRKRLGEHYLE*
Ga0126309_104426612	3300010039	Serpentine Soil	MRDLHVYVDSVGTGGRGEQAAFYSRRADGPFYRWFYAEGSGRWLYSRVSLDRLTLRVLSAARWEAVPTTLRDRLGEHYLE*
Ga0126309_110205921	3300010039	Serpentine Soil	MRDLHVYVETASRGARDERTAFYSRRGDGPFYRWLYAEGLGRWRYSRVSLDRPTLRVLCLAPWDAVPPALRNRLGEHYLE*
Ga0126312_110987642	3300010041	Serpentine Soil	MRDLHVYVEHVGSGARGQRAAFYSRRADGPFYRWLYAEGSGRWRYSRVSLDRLTLRMLSVAPWEAVPDALRSRLGEHYLE*
Ga0126314_103578811	3300010042	Serpentine Soil	MRDLHVYVEHAGSGARGQLAAFYSRRADGPFYRWLYAEGSGRWRYSRVSLDRLTLRMLSVAPWEAVPDALRSRLGEHYLE*
Ga0126314_104309934	3300010042	Serpentine Soil	MRDLRIYIAPVGSGGRNQDTTFYSQRADGPYYRWVYAEGLGRWRYSRVSLDRFELNVLCVARWDAVPATLRDRLGEHYLE*
Ga0126310_102908743	3300010044	Serpentine Soil	MRDLRVYIDPLGPDGRGKDATFYSQRADGPYYRWSYAEGAGRWRYSRVSLERPELNVLCVARWEAVPPALRDRLGEHYLE*
Ga0126310_104828943	3300010044	Serpentine Soil	MRDLHVYIEPLNSEGRGGPTAFYSRRADGPFYLWLYAEGAGHWHYSRVSLDKPALRVLCVARWEAVPTALRKRLGEHYLE*
Ga0126310_111047062	3300010044	Serpentine Soil	MRDLRVYVNAVGADGRGHDATFYSQRADGPYYRWVYVEGSGRWRYSRVSLDRPELNVLCVARWDAVPPALRDRLGEHYLE*
Ga0126311_100013966	3300010045	Serpentine Soil	VGSNGRGHDVTFYSQRADGPYYRWVYAEGLGRWRYSRVSLDRLELNVLCVARWDAVPPALRDRLGEHYLE*
Ga0126311_108142033	3300010045	Serpentine Soil	MRDLHVYVDSIGSEARGEKAAFYTRRADGPYYRWLYAEASGGWGYSRVKLDRLTLRVLCVARWEAVPTTLRKRLGEHYLE*
Ga0126311_111366193	3300010045	Serpentine Soil	MRDLHVYIEPLNSGGRGEPTAFYSRRADGPFYLWLYAEGAGRWHYSRVSLDKPALRVLCVARWEAVPTALRKRLGEHYLE*
Ga0126311_117237111	3300010045	Serpentine Soil	MRDLHVYVEPSGSGARGQRAAFYSRRADGPFYRWFYAEGSGRWRYSRVSLDRLTLRMLCVAPWDAVPAALRNRLGEHYLE*
Ga0126306_103320982	3300010166	Serpentine Soil	VGSNGRGHDVTFYSQRADGPYYRWVYAEGLGRWHYSRVSLDRVELNVLCVARWDAVPPALRDRLGEHYLE*
Ga0126306_105405012	3300010166	Serpentine Soil	MRDLHVYVEHAGSGARGQRAAFYSRRADGPFYRWLYAEGSGRWRYSRVSLDRLTLRMLCVAPWEAVPDALRSRLGEHYLE*
Ga0126306_115033942	3300010166	Serpentine Soil	MRDLHVYVDSLGSEARGEQAAFYSRRADGPYYRWLYAEASGRWRYSRVKLDRVTLRVLCVARWEAVPTTLRKRLGEHYLE*
Ga0150985_1117817516	3300012212	Avena Fatua Rhizosphere	MRDLRVYIHPVGPGARGQDATFYSQRGDGPYYRWVYAEGAGRWRYSRVSLERPELNVLCVARWEAVPAALRDRLGEHYLD*
Ga0150985_1171388991	3300012212	Avena Fatua Rhizosphere	MRDLRVYVDSVTRRARGGLTAFYSRRADGPFYRWLYAEGSGHWCYSRVSLDRMELSALSVAPWDAVPAALRDRLGEHYLE*
Ga0150984_1091728937	3300012469	Avena Fatua Rhizosphere	RGQDATFYSQRADGPYYRWVYAEGAGRWRYSRVSLERPELNVLCVARWEAVPAALRDRLGEHYLE*
Ga0182000_100108216	3300014487	Soil	MRDLHVYVEPVGSGARGERTTFYSRRGDGPYYRWLYAEGPGRWRYSRVHLDRPTLRLLSLAPWEALPAALRSRLGEHYLE*
Ga0182001_100003278	3300014488	Soil	LIRDLRVYVEPVSSGGRGEGAAFYSRRADGPYYRWVYAEGSMRWRFSRVPSSRLRRQVLCVAPWEAVPSALRDRLGEHYLE*
Ga0182001_100318824	3300014488	Soil	MRDLHVYIEPLGPEERGGQTAFYSRRADGPLYRWLYAEGAGRWCCSRVSLDRPALRVLCVARWDAVPAALRKRLGEHYVE*
Ga0182001_100670343	3300014488	Soil	MQMRDLHVYVAPSSSAARCAQTAFYSRRADGPYYRWLYAEGAGRWRYSRVRLDRLALRVLCVARWEAVPTALRDRLGEHYLE*
Ga0182001_101190862	3300014488	Soil	MRDLHVYVEPAGSGARGERTTFYSRRGDGPFYRWLYAEGAGRWRYSRVNLDRPTLRVLCLAPWDAVPAALRSRLGEHYLE*
Ga0190275_104404783	3300018432	Soil	VTHMRDLHVYVEPVGAGARVERKAFYSRRADGPYYRWFYAEGAGRWRYSRVSLDRPTLRVLCVAPWDAVPDALRSRLGEHYLE
Ga0190275_130415512	3300018432	Soil	MRDLHVYIAPLAQEARGEHTSFYTRRADGPYYRWFYAEGSGRWRYSRVSLDRPTLRVLCVARWEAVPTTLRD
Ga0190269_100093137	3300018465	Soil	MRDLRVYIEPVGPGARGGATAFYSRRADGPYYRWLYAEGPGRWHYSRVSLDRLAQRVLCVAPWDALPTALRARLGEHYLE
Ga0190269_101305892	3300018465	Soil	MRDLHVYVEPAGPGARVERKAFYSRRADGPYYRWFYAEVPGRWHYSRVSLDRPTLRVLCVAPWDAVPPALRSRLGEHYLE
Ga0190269_115620341	3300018465	Soil	MRDLHVYIEPLSSEERGGETAFYTRRADGPYYRWFYAEGAGRWRYSRVSLDRPALRVLCVARWEAVPTTLRKRLGEHYLE
Ga0190268_100041913	3300018466	Soil	MRDLHVYVDSIGSEARGEKAAFYTRRADGPYYRWLYAEASGGWGYSRVKLDRVTLRVLCVARWEAVPTTLRKRLGEHYLE
Ga0190268_101117955	3300018466	Soil	RLGRRSLQSVYRTQMRDLHVYVEPLSSGERGGQTEFYTRRADGPYYRWFYAEGAGRWRYSRVSLDKPALRVLCLARWEAVPAALRKRLGEHYLE
Ga0190268_101671623	3300018466	Soil	MRDLHVYVTPVAAEARGEHTSFYTRRADGPYYRWFYAEGSGRWRYSRVSLDRLTLRVLCVARWEAVPTTLRDRLGEHYLE
Ga0190268_108856892	3300018466	Soil	MRDLHIYVEQLSPRERGGQTAFYSRRADGPYYRWLYAEGAGHWSYSRISLDKPTQRELCVARWEALPTALRKRLGEHYLE
Ga0190268_109579742	3300018466	Soil	MRDLHVYVEHADAGARGQRAAFYSRRADGPFYRWLDAEGSGRWRYSRVSLDRLTVRMLCVAPWEALPAALRSRLGEHYLE
Ga0193595_10126596	3300018890	Soil	MRDLRVYIDPVAPGARGARKAFYSRRADGPYYLWFYAEGSGRWRYSRVNLDSHTLRVLCVAPWDAVPNALQDRLGEHYLD
Ga0190273_100682493	3300018920	Soil	MRDLHVYVEHADSGARSQRAAFYSRRADGPFYRWLYAEGSGRWRYSRVSLDRLTLRMLSVAPWEAVPDALRSRLGEHYLE
Ga0190273_107418543	3300018920	Soil	MRDLRVYVAPVGSNGRGHDVTFYSQRADGPYYRWVYAEGLGRWHYSRVSLDRLELNVLCVARWDAVPPALRDRLGEHYLE
Ga0193599_10179392	3300018946	Soil	MIRELRVYVEPVGPVGGGADAAFYSRRADGPYYRWVYAEGAMRWQFSRVLLSRLRLRVLCVAPWDAVPAALQDSLGEHYLE
Ga0190264_119363751	3300019377	Soil	MRDLHVYVEHAGSGARGQRAAFYSRRADGPFYRWLYAEGPGRWRYSRVSLDRLTLRMLCVAPWEAVPDALRSRLGEHYLE
Ga0190267_101283942	3300019767	Soil	MRDLHVYVEYVGADARGQRAAFYSRRADGPFYRWLDAEGSGRWRYSRVSLDRLTVRMLCVAPWEALPAALRRRLGEHYLE
Ga0190267_104014051	3300019767	Soil	MRDLHVYVEPAGTRDERTAFYSRRGDGPFYRWLCAEGTGRWRYSRVSLDRPTLRVLCVAPWDAVPAALRNRLGEHYLE
Ga0190267_106665331	3300019767	Soil	MGSEGRGHDATFYSQRADGPYYRWVYAEGLGRWHYSRVSLDRFELNVLSVARWDAVPATLRDRLGEHYLE
Ga0190267_108812141	3300019767	Soil	PSEHPARERRPGSLSLHMRDLHVYVEPAGAGARGQRAAFYSRRADGPFYRWLDAEGSGRWRYSRVSLDRLTLRMLCVAPWEAVPPALRSRLGEHYLV
Ga0190267_113004152	3300019767	Soil	MRDLHVYVEPAGSGARGERTTFYSRRGDGPFYRWLYAEGSGRWRYSRISLDRPTLRVLSVAPWDALPDALRSRLGEHYLD
Ga0196977_10439543	3300020146	Soil	MRDLHVYVEPLSPGGRGVRTAFYSRRADGPFYRWLYAEGAGRWRYSRVILDRPALRVLCVTRWDAVPAALQKRLGEHYLE
Ga0196963_102019494	3300020215	Soil	RGEATAFYSRRADGPYYRWLYAEGAGGWHYSRVRLDRLTLRVLCVAPWDAVPTALRARLGEHYLE
Ga0213906_1009655	3300021265	Soil	AGRPSVAHMRDLHIYVEPAGSGADGERNTFYSRRADGPYYRWLYAEGPKRWRYSRVHLDRPTLRVLSLAPWDCLPAALRSRLGEHYLE
Ga0213876_1000005462	3300021384	Plant Roots	MRDLHVYVDPAGPDGRGQDEVFYSRRADGPYYRWVYAEGAGGWHFSRVPLSRLRLRVLCVAPWNAVPAALRDRLGEHYLE
Ga0182009_102129603	3300021445	Soil	MRDLRVYIHPIGPGGRGQDATFYSQRADGPYYRWVYAEGAGRWHYSRVSLERPELNVLCVARWEAVPAALRDRLGEHYLE
Ga0196962_101338931	3300024430	Soil	MRDLHVYVEPLSSGTRGGQKAFYSRRADGPYYRWFYAEGAERWHYSRVSLDKPAQRVLCVARWDAVPDALRTRLGEHYLE
Ga0207661_114911202	3300025944	Corn Rhizosphere	MRDLRVYIHPLGPGARGQDATFYSQRADGPYYRWVYAEGAGRWRYSRVSLERPELNVLCVARWEAVPAALRDRLGEHYLE
Ga0209795_100782132	3300027718	Agave	MRDLHIYVEPLSPGARGEQTAFYSRRADGPYYRWLYAEGAGRWHYSRVSLDRPTQRELCVARWEALPTALRKRLGEHYLE
Ga0209461_100009746	3300027750	Agave	MRDLHVYVEPAGSGAGGERATFYSRRADGPFYRWLYAEGAGRWRYSRVVLDRPTLRVLCLAPWDAVPAALRNRIGEHYLE
Ga0307288_101901291	3300028778	Soil	MRDLRVYVDSVAPGARADRTSFYTRRADGPYYRWLYTEGSGRWRYSRVSLSKLTLRVLSVAPWEAIPAALRDRLDEHYLE
Ga0268243_10075025	3300030510	Soil	MRDLHVYVEPVGSGARGERTTFYSRRGDGPYYRWLYAEGPGRWRYSRVHLDRPTLRLLSLAPWEALPAALRSRLGEHYLE
Ga0268242_10001643	3300030513	Soil	VSSGGRGEGAAFYSRRADGPYYRWVYAEGSMRWRFSRVPSSRLRRQVLCVAPWEAVPSALRDRLGEHYLE
Ga0307408_1006633412	3300031548	Rhizosphere	MRDLHVYVEPSGSGARGQRAAFYSRRADGPFYRWLYAEGSGRWRYSRVSLDRLTLRMLCVAPWEAVPDALRSRLGEHYLE
Ga0307405_119690971	3300031731	Rhizosphere	MRDLHVYVEPGAPARWERTTFYSRRADGPYYRWLYAEVPGRWRYSRVRLDRPTLRVLCLTSWDAVPAALRSRLGEHYLE
Ga0307410_119818432	3300031852	Rhizosphere	MRDLHVYVEPSGSDARGQRAAFYSRRADGPFYRWLYAEGSGRWRYSRVSLDRLTLRMLCVAPWEAVPDALRSRLGEHYLE
Ga0307415_1006953494	3300032126	Rhizosphere	YVEPSGSGARGQRAAFYSRRADGPFYRWLYAEGSGRWRYSRVSLDRLTLRMLCVAPWEAVPDALRSRLGEHYLE
Ga0334918_031058_63_302	3300034000	Hypolithic Biocrust	MRDLRIYIAPVGSGRGQDTTFYSQRADGPYYRWVCAEGSGRWRYSRVSLDRFELNVLSVARWDAVPATLRDRLGEHYLE
Ga0334920_001485_3202_3444	3300034002	Hypolithic Biocrust	MRDLHVYVEPVGLGARADRKAFYSRRADGPYYRWLYAEGQGGWLYSRVSLDRPTLRMLCVAPWEAVPAALRSRLGEHYLE
Ga0334930_053714_34_276	3300034005	Sub-Biocrust Soil	MRDLHVYVEPAGSGARDERAAFYSRRGDGPFYRWLCAEGTGRWRYSRVSLDRPTLRVLCVAPWEAVPAALRSRLGEHYLE
Ga0334930_070333_91_324	3300034005	Sub-Biocrust Soil	MRDLHVYVEPLSAGAPAAFYSRRADGPYYRWFYAEGLGRWHYSRVNLDRQALRVLCLARWEAVPTALRKRLGEHYLE
Ga0334934_004643_1448_1690	3300034006	Biocrust	MRDLHIYVEPSGQGARVERAAFYSRRADGPFYRWLYAEGPGRWDYSRVSLDRLTLRMLCAAPWDALPAALRSRLGEHYLE
Ga0334934_015270_546_788	3300034006	Biocrust	MRDLHVYVAPVAPEARGEHTSFYTRRADGPYYRWFYAEGSGRWRYSRVNLDRLTLRVLCVARWEAVPTTLRDRLGEHYLE
Ga0334942_009117_458_700	3300034008	Biocrust	MRDLHVYVEPAGPVERVERKAFYSRRGDGPFYRWLYAEGSGRWRYSRVSLDRPTLRVLSVAPWDALPDALRSRLGEHYLD
Ga0334944_010786_1410_1652	3300034009	Sub-Biocrust Soil	MRDLHVYVAPAGSEARGEFTAFYSRRSDGPYYRWFYAERSGRWHYSRVNLDRLTRRVLCVAPWDAVPTALRARIGEHYLD
Ga0334944_024063_238_480	3300034009	Sub-Biocrust Soil	MRDLHIYVEPAGSGARGERAAFYSRRADGPYYRWLYAEVPGRWHYSRVSLDRLTLRMLCVAPWDALPAALRSRLGEHYLE
Ga0334944_079999_2_226	3300034009	Sub-Biocrust Soil	YVAPVAPEARGEHTSFYTRRADGPYYRWFYAEGSGRWRYSRVNLDRLTLRVLCVARWEAVPTTLRDRLGEHYLE
Ga0334927_005428_1393_1635	3300034024	Hypolithic Biocrust	MRDLHVYVEPAGAGARGQRAAFYSRRADGPFYRWLYAEGSGRWRYSRVNLDRLTLRMLCVAPWDAVPDALRNRLGEHYLE
Ga0334940_001278_4403_4645	3300034025	Biocrust	MRDLHVYVAPAASEARDARTAFYTRRGDGPYYHWLYAEGPGRWLYSRVSLDRLALRVLCVARWEAVPAALRDRLGEHYLE
Ga0334946_000175_11701_11943	3300034026	Sub-Biocrust Soil	MRDLHVYVEPAGPGARVERKAFYSRRADGPFYRWLYAEGSGRWRYSRVSLDRPTLRVLCVAPWDAVPPALRSRLGEHYLD
Ga0334946_000445_5301_5543	3300034026	Sub-Biocrust Soil	MRDLHVYVEPAGAGARGERGAFYTRRADGPYYRWFYAEGSGRWRYSRVSLDRPTLRVLCVAPWDAVPAALRNRLGEHYLE
Ga0334946_002975_1143_1385	3300034026	Sub-Biocrust Soil	MRELRVYIDPGGYGARGERTAFYTRRADGPYYRWLYVEGSGRWRYSRVRLDRMTLSVLSVAPWDAIPTTLRERLGEHYLE
Ga0334946_038441_270_512	3300034026	Sub-Biocrust Soil	MRDLHVYVEPLSAGARGEPAAFYSRRADGPYYRWFYAEGLGRWHYSRVNLDRQALRVLCLARWEAVPTALRKRLGEHYLE
Ga0334952_000323_16151_16396	3300034030	Biocrust	MRDLHVYVEPSGSAGGRVERKAFYSRRGDGPYYRWLYAEGPGRWRYSRVILDRPTLRVLCLAPWEAVPDALRSRLGEHYLD
Ga0334929_000157_29077_29319	3300034135	Hypolithic Biocrust	MRDLRVYVDPVAPGARGARKAFYSRRADGPYYLWFYAEGSGRWRYSRVNLDRLTLRVLCVAPWDAVPNALQDRLGEHYLD
Ga0334943_017548_1137_1346	3300034137	Biocrust	MRDLHVYVEPAGAGARGERGAFYTRRADGPYYRWFYAEGSGRWRYSRVSLDRPTLRVLCVAPWDAVPAAL
Ga0334943_112783_11_253	3300034137	Biocrust	MRDLHVYVESAGRGYRGDRGAFYSRRADGPYYRWLYAEGAGSWRYSRVSLDRPTLRVLCLAPWDAVPAALRSRLNEHYLE
Ga0334961_044862_2_208	3300034143	Sub-Biocrust Soil	MRDLHVYVEPAGARGERTTFYSRRGDGPFYRWLYAEGAGRWRYSRVNLDRPTLRVLCLAPWDAVPDALR
Ga0334963_000317_9186_9428	3300034145	Sub-Biocrust Soil	MRDLHVYVEPVGSAPRGEWKAFYSRRADGPYYRWLYAEGQDHWHYSRVSLDRPTLRMLCVAPWDAVPATLRSRLGEHYLE
Ga0334913_024865_1010_1252	3300034172	Sub-Biocrust Soil	MRDLHVYVEPAGSAARGERATFYSRRADGPYYRWLYAEGPGRWRCSRVHLDRPTLRVLSLAPWDCLPATLRSRLGEHYLE
Ga0334937_039602_679_921	3300034221	Biocrust	MRDLHVYVEPAAGGARGDREAFYSRRGDGPYYRWLYAEGAGSWRYSRVSLDRPTLRVLCLAPWDAVPPALRSRLNEHYLE
Ga0334937_068004_620_862	3300034221	Biocrust	MRDLHVYVEPAGDGARVERKAFYSRRGDGPFYRWLYAEGSGRWRYSRVSLDRPTLRVLSVAPWDALPAALRSRLGEHYLD
Ga0334923_019795_801_1043	3300034376	Hypolithic Biocrust	MRDLHVYTDPVGPDGRGQGAVFYSRRADGPYYRWVYAEGAGGWHFSRVPLSRFTLRVLCLAPWNAVPVGLRDRLGEHYLE
Ga0334931_000059_53323_53565	3300034377	Sub-Biocrust Soil	MRDLHIYVEPSGSGARGERAAFYSRRADGPYYRWLYAEVPGCWHYSRVSLDRLTLRMLCVAPWDALPAALRSRLGEHYLE
Ga0334917_045448_259_495	3300034391	Hypolithic Biocrust	MRDLHIYVAPAAGSGGRTTFYSRRGDGPYYRWLYAEGPGRWRFSRVSLDRPAVRLLSLAPWDAVPAALRSRLGEHYLE
Ga0334960_029447_3_269	3300034402	Sub-Biocrust Soil	HVYVDPAGAGAREERAAFYSRRADGPFYRWFYAEGPGRWRYSRVNLDKPTLRVLSLAPWDAVPAALRKRLGEHYLEEIGPAAAPAKER
Ga0334905_010532_843_1085	3300034687	Soil	MRDLHVYINPVGSGTRGEHAAFYTRRGDGPYYRWLYTEGSGRWRYSRVNLDRLTLRVLCVARWEAVPNTLRERLGEHYLE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091480

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences