Basic Information | |
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Family ID | F091557 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 107 |
Average Sequence Length | 79 residues |
Representative Sequence | MSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG |
Number of Associated Samples | 100 |
Number of Associated Scaffolds | 107 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 56.07 % |
% of genes near scaffold ends (potentially truncated) | 24.30 % |
% of genes from short scaffolds (< 2000 bps) | 76.64 % |
Associated GOLD sequencing projects | 93 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (85.047 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.757 % of family members) |
Environment Ontology (ENVO) | Unclassified (34.579 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (53.271 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 36.25% β-sheet: 0.00% Coil/Unstructured: 63.75% | Feature Viewer |
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Pfam ID | Name | % Frequency in 107 Family Scaffolds |
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PF09037 | Sulphotransf | 17.76 |
PF09362 | DUF1996 | 6.54 |
PF13469 | Sulfotransfer_3 | 3.74 |
PF14667 | Polysacc_synt_C | 2.80 |
PF04932 | Wzy_C | 2.80 |
PF06977 | SdiA-regulated | 2.80 |
PF00685 | Sulfotransfer_1 | 1.87 |
PF13579 | Glyco_trans_4_4 | 0.93 |
COG ID | Name | Functional Category | % Frequency in 107 Family Scaffolds |
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COG4424 | LPS sulfotransferase NodH | Cell wall/membrane/envelope biogenesis [M] | 17.76 |
COG3204 | Uncharacterized Ca-binding beta-propeller protein YjiK | General function prediction only [R] | 2.80 |
COG3307 | O-antigen ligase | Cell wall/membrane/envelope biogenesis [M] | 2.80 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 85.05 % |
Unclassified | root | N/A | 14.95 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300000881|JGI10215J12807_1238854 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2086 | Open in IMG/M |
3300001686|C688J18823_10278737 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1103 | Open in IMG/M |
3300002568|C688J35102_120377030 | All Organisms → cellular organisms → Bacteria | 1024 | Open in IMG/M |
3300004156|Ga0062589_100788191 | All Organisms → cellular organisms → Bacteria | 858 | Open in IMG/M |
3300004480|Ga0062592_100878972 | All Organisms → cellular organisms → Bacteria | 805 | Open in IMG/M |
3300004799|Ga0058863_11564050 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 511 | Open in IMG/M |
3300005294|Ga0065705_10003128 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 9172 | Open in IMG/M |
3300005294|Ga0065705_11008401 | Not Available | 523 | Open in IMG/M |
3300005329|Ga0070683_101882295 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 575 | Open in IMG/M |
3300005345|Ga0070692_10079287 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1765 | Open in IMG/M |
3300005345|Ga0070692_10264186 | All Organisms → cellular organisms → Bacteria | 1036 | Open in IMG/M |
3300005347|Ga0070668_100119322 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2106 | Open in IMG/M |
3300005356|Ga0070674_101621984 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 584 | Open in IMG/M |
3300005366|Ga0070659_101121308 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 694 | Open in IMG/M |
3300005440|Ga0070705_100910168 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 708 | Open in IMG/M |
3300005441|Ga0070700_100067622 | All Organisms → cellular organisms → Bacteria | 2270 | Open in IMG/M |
3300005456|Ga0070678_100281687 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1406 | Open in IMG/M |
3300005457|Ga0070662_100248338 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1429 | Open in IMG/M |
3300005457|Ga0070662_100435955 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1086 | Open in IMG/M |
3300005459|Ga0068867_100148727 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1838 | Open in IMG/M |
3300005535|Ga0070684_100684489 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 956 | Open in IMG/M |
3300005545|Ga0070695_100042409 | All Organisms → cellular organisms → Bacteria | 2888 | Open in IMG/M |
3300005615|Ga0070702_100321773 | All Organisms → cellular organisms → Bacteria | 1078 | Open in IMG/M |
3300006844|Ga0075428_100568465 | All Organisms → cellular organisms → Bacteria | 1212 | Open in IMG/M |
3300006881|Ga0068865_100450275 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1064 | Open in IMG/M |
3300009098|Ga0105245_12792634 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 541 | Open in IMG/M |
3300009100|Ga0075418_10029569 | All Organisms → cellular organisms → Bacteria | 5969 | Open in IMG/M |
3300009147|Ga0114129_13470091 | Not Available | 505 | Open in IMG/M |
3300009176|Ga0105242_10088939 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 2595 | Open in IMG/M |
3300009551|Ga0105238_11301935 | All Organisms → cellular organisms → Bacteria | 753 | Open in IMG/M |
3300009553|Ga0105249_11922657 | Not Available | 664 | Open in IMG/M |
3300009789|Ga0126307_10000529 | All Organisms → cellular organisms → Bacteria | 24686 | Open in IMG/M |
3300009840|Ga0126313_10376745 | All Organisms → cellular organisms → Bacteria | 1123 | Open in IMG/M |
3300010038|Ga0126315_10780708 | Not Available | 628 | Open in IMG/M |
3300010040|Ga0126308_10036304 | All Organisms → cellular organisms → Bacteria | 2787 | Open in IMG/M |
3300010041|Ga0126312_10267924 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1202 | Open in IMG/M |
3300010045|Ga0126311_10034964 | All Organisms → cellular organisms → Bacteria | 3123 | Open in IMG/M |
3300010136|Ga0127447_1057328 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1147 | Open in IMG/M |
3300010147|Ga0126319_1547354 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1311 | Open in IMG/M |
3300010373|Ga0134128_10698072 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1127 | Open in IMG/M |
3300010375|Ga0105239_11529351 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 771 | Open in IMG/M |
3300010397|Ga0134124_10038740 | All Organisms → cellular organisms → Bacteria | 3979 | Open in IMG/M |
3300010399|Ga0134127_11118357 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 852 | Open in IMG/M |
3300010400|Ga0134122_10218714 | All Organisms → cellular organisms → Bacteria | 1590 | Open in IMG/M |
3300010403|Ga0134123_10555515 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1093 | Open in IMG/M |
3300011119|Ga0105246_10856562 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 811 | Open in IMG/M |
3300011333|Ga0127502_10161401 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1478 | Open in IMG/M |
3300012212|Ga0150985_108578679 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 502 | Open in IMG/M |
3300012212|Ga0150985_111032088 | All Organisms → cellular organisms → Bacteria | 2871 | Open in IMG/M |
3300012392|Ga0134043_1003769 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 944 | Open in IMG/M |
3300012403|Ga0134049_1390621 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1414 | Open in IMG/M |
3300012409|Ga0134045_1331567 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1454 | Open in IMG/M |
3300012410|Ga0134060_1136412 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1305 | Open in IMG/M |
3300012883|Ga0157281_1109800 | Not Available | 512 | Open in IMG/M |
3300012891|Ga0157305_10070500 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 800 | Open in IMG/M |
3300012897|Ga0157285_10093239 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 816 | Open in IMG/M |
3300012902|Ga0157291_10062157 | All Organisms → cellular organisms → Bacteria | 918 | Open in IMG/M |
3300012911|Ga0157301_10002947 | All Organisms → cellular organisms → Bacteria | 2940 | Open in IMG/M |
3300013297|Ga0157378_10537185 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1173 | Open in IMG/M |
3300013297|Ga0157378_12983800 | Not Available | 525 | Open in IMG/M |
3300013307|Ga0157372_12370179 | Not Available | 609 | Open in IMG/M |
3300013308|Ga0157375_13704312 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 508 | Open in IMG/M |
3300014326|Ga0157380_10439372 | All Organisms → cellular organisms → Bacteria | 1250 | Open in IMG/M |
3300014326|Ga0157380_11149738 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 818 | Open in IMG/M |
3300015201|Ga0173478_10780457 | Not Available | 522 | Open in IMG/M |
3300015372|Ga0132256_100070981 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 3300 | Open in IMG/M |
3300015373|Ga0132257_100030184 | All Organisms → cellular organisms → Bacteria | 5858 | Open in IMG/M |
3300015374|Ga0132255_100113052 | All Organisms → cellular organisms → Bacteria | 3714 | Open in IMG/M |
3300017965|Ga0190266_10003838 | All Organisms → cellular organisms → Bacteria | 3227 | Open in IMG/M |
3300018073|Ga0184624_10143433 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1046 | Open in IMG/M |
3300018465|Ga0190269_10860915 | Not Available | 662 | Open in IMG/M |
3300018466|Ga0190268_10838693 | Not Available | 703 | Open in IMG/M |
3300018469|Ga0190270_10001378 | All Organisms → cellular organisms → Bacteria | 11266 | Open in IMG/M |
3300019356|Ga0173481_10002638 | All Organisms → cellular organisms → Bacteria | 4556 | Open in IMG/M |
3300019767|Ga0190267_10000450 | All Organisms → cellular organisms → Bacteria | 9241 | Open in IMG/M |
3300025315|Ga0207697_10384922 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 623 | Open in IMG/M |
3300025901|Ga0207688_10033098 | All Organisms → cellular organisms → Bacteria | 2857 | Open in IMG/M |
3300025917|Ga0207660_10633026 | All Organisms → cellular organisms → Bacteria | 872 | Open in IMG/M |
3300025919|Ga0207657_10917733 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 674 | Open in IMG/M |
3300025932|Ga0207690_10530160 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 955 | Open in IMG/M |
3300025935|Ga0207709_11133531 | Not Available | 643 | Open in IMG/M |
3300025938|Ga0207704_10647267 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 870 | Open in IMG/M |
3300025945|Ga0207679_10434740 | All Organisms → cellular organisms → Bacteria | 1161 | Open in IMG/M |
3300025961|Ga0207712_10133420 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1896 | Open in IMG/M |
3300025972|Ga0207668_10299840 | All Organisms → cellular organisms → Bacteria | 1326 | Open in IMG/M |
3300026075|Ga0207708_10119354 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 2054 | Open in IMG/M |
3300026089|Ga0207648_10175915 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1893 | Open in IMG/M |
3300027446|Ga0207562_1007374 | Not Available | 557 | Open in IMG/M |
3300027907|Ga0207428_10005003 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 12463 | Open in IMG/M |
3300028719|Ga0307301_10014164 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 2279 | Open in IMG/M |
3300028755|Ga0307316_10385037 | Not Available | 518 | Open in IMG/M |
3300028778|Ga0307288_10378302 | Not Available | 574 | Open in IMG/M |
3300028811|Ga0307292_10074347 | All Organisms → cellular organisms → Bacteria | 1306 | Open in IMG/M |
3300028881|Ga0307277_10059299 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1570 | Open in IMG/M |
3300031092|Ga0308204_10029210 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1209 | Open in IMG/M |
3300031548|Ga0307408_100234991 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1503 | Open in IMG/M |
3300031562|Ga0310886_10646252 | Not Available | 654 | Open in IMG/M |
3300031731|Ga0307405_10843452 | All Organisms → cellular organisms → Bacteria | 771 | Open in IMG/M |
3300031731|Ga0307405_11635168 | Not Available | 569 | Open in IMG/M |
3300031824|Ga0307413_10471317 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1001 | Open in IMG/M |
3300031911|Ga0307412_11229236 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 672 | Open in IMG/M |
3300031938|Ga0308175_100872869 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 988 | Open in IMG/M |
3300031943|Ga0310885_10261312 | All Organisms → cellular organisms → Bacteria | 881 | Open in IMG/M |
3300031995|Ga0307409_100007822 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 6433 | Open in IMG/M |
3300034660|Ga0314781_033410 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 862 | Open in IMG/M |
3300034662|Ga0314783_095743 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 627 | Open in IMG/M |
3300034680|Ga0370541_004086 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1269 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 17.76% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 6.54% |
Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 5.61% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 5.61% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 5.61% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 4.67% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 4.67% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 4.67% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 3.74% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 3.74% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 3.74% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 2.80% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 2.80% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.80% |
Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 1.87% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.87% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 1.87% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.87% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 1.87% |
Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 1.87% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.87% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.87% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.87% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.87% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.93% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.93% |
Host-Associated | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated | 0.93% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 0.93% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.93% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.93% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.93% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300000881 | Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil | Environmental | Open in IMG/M |
3300001686 | Grasslands soil microbial communities from Hopland, California, USA | Environmental | Open in IMG/M |
3300002568 | Grasslands soil microbial communities from Hopland, California, USA - 2 | Environmental | Open in IMG/M |
3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
3300004799 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Environmental | Open in IMG/M |
3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Host-Associated | Open in IMG/M |
3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Host-Associated | Open in IMG/M |
3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Host-Associated | Open in IMG/M |
3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Environmental | Open in IMG/M |
3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300009789 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28 | Environmental | Open in IMG/M |
3300009840 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A | Environmental | Open in IMG/M |
3300010038 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106 | Environmental | Open in IMG/M |
3300010040 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55 | Environmental | Open in IMG/M |
3300010041 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A | Environmental | Open in IMG/M |
3300010045 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61 | Environmental | Open in IMG/M |
3300010136 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300010147 | Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
3300010397 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4 | Environmental | Open in IMG/M |
3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
3300011333 | Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
3300012392 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300012403 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300012409 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300012410 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300012883 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 | Environmental | Open in IMG/M |
3300012891 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2 | Environmental | Open in IMG/M |
3300012897 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1 | Environmental | Open in IMG/M |
3300012902 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1 | Environmental | Open in IMG/M |
3300012911 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2 | Environmental | Open in IMG/M |
3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
3300015201 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2) | Environmental | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300017965 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T | Environmental | Open in IMG/M |
3300018073 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1 | Environmental | Open in IMG/M |
3300018465 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS | Environmental | Open in IMG/M |
3300018466 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T | Environmental | Open in IMG/M |
3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
3300019356 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2) | Environmental | Open in IMG/M |
3300019767 | Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T | Environmental | Open in IMG/M |
3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Host-Associated | Open in IMG/M |
3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) | Host-Associated | Open in IMG/M |
3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) | Environmental | Open in IMG/M |
3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300027446 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A2a-10 (SPAdes) | Environmental | Open in IMG/M |
3300027907 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) | Host-Associated | Open in IMG/M |
3300028719 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182 | Environmental | Open in IMG/M |
3300028755 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356 | Environmental | Open in IMG/M |
3300028778 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142 | Environmental | Open in IMG/M |
3300028811 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149 | Environmental | Open in IMG/M |
3300028881 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116 | Environmental | Open in IMG/M |
3300031092 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Host-Associated | Open in IMG/M |
3300031562 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3 | Environmental | Open in IMG/M |
3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Host-Associated | Open in IMG/M |
3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Host-Associated | Open in IMG/M |
3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Host-Associated | Open in IMG/M |
3300031938 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1 | Environmental | Open in IMG/M |
3300031943 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2 | Environmental | Open in IMG/M |
3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Host-Associated | Open in IMG/M |
3300034660 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034662 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034680 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI10215J12807_12388542 | 3300000881 | Soil | MSTPDIAQRLDGAIDVSVVGETSVVRDLRELDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG* |
C688J18823_102787372 | 3300001686 | Soil | MDMSTPSTAQSLDGALDASVVRETSVAVRHGRERDDLGERDIAASLESTNDLPMQFVRLGLPAAIFLWFVFGLLAYGAYRFFAG* |
C688J35102_1203770302 | 3300002568 | Soil | MDMSTPSTAQSLDGALDVSVVRETSVAVRHGRERDDLGERDIAASLESTNDLPMQFVRLGLPAAIFLWFVFG |
Ga0062589_1007881911 | 3300004156 | Soil | LDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERDHLREPDTAVSHESTNDIPMQFVRLGLPVSIFLWFVAVLVAYGAYRFLAG* |
Ga0062592_1008789721 | 3300004480 | Soil | VSTPNTAPSLEGAFDVSVVGETNVVRDRRERDHLREPDTAVSHESTNDIPMQFVRLGLPVSIFLWFVAVLVAYGAYRFLAG* |
Ga0058863_115640502 | 3300004799 | Host-Associated | APSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHGSTDDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG* |
Ga0065705_100031285 | 3300005294 | Switchgrass Rhizosphere | MDMSTPSTAQSLDGAVDASVVRKTSVVRDARERDDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWLVIGLVAYGAYRFFAG* |
Ga0065705_110084011 | 3300005294 | Switchgrass Rhizosphere | LDMSTPDIAQRLDGAIDVSVVGETSVVRDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFA |
Ga0070683_1018822951 | 3300005329 | Corn Rhizosphere | FEQFLAKSRATIVDMSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG* |
Ga0070692_100792872 | 3300005345 | Corn, Switchgrass And Miscanthus Rhizosphere | MSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG* |
Ga0070692_102641862 | 3300005345 | Corn, Switchgrass And Miscanthus Rhizosphere | LDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREQDTAASHGSTDDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG* |
Ga0070668_1001193222 | 3300005347 | Switchgrass Rhizosphere | LDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASRGSTDDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG* |
Ga0070674_1016219842 | 3300005356 | Miscanthus Rhizosphere | MAQRLDGAIDVSVVGETSVVRDRRERENLREPDTAAHESTNDVPMQFVRLGLPVTIFLWFVFVLLAYGAYRFFAG* |
Ga0070659_1011213081 | 3300005366 | Corn Rhizosphere | MAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAGYGAYRFFTG* |
Ga0070705_1009101682 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | LDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHGSTDDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG* |
Ga0070700_1000676221 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | MSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVF |
Ga0070678_1002816871 | 3300005456 | Miscanthus Rhizosphere | GAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG* |
Ga0070662_1002483382 | 3300005457 | Corn Rhizosphere | ILDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHGSTDDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG* |
Ga0070662_1004359551 | 3300005457 | Corn Rhizosphere | VDMSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG* |
Ga0068867_1001487273 | 3300005459 | Miscanthus Rhizosphere | MSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAGHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG* |
Ga0070684_1006844892 | 3300005535 | Corn Rhizosphere | MSTPDIAQRLDGAIDVSVVGETSVVRDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG* |
Ga0070695_1000424092 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | LDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHGSTNDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG* |
Ga0070702_1003217732 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | MSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRF |
Ga0075428_1005684652 | 3300006844 | Populus Rhizosphere | MDMSTPSTAQSLDGALDASVVRKTSVVRDARERGDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWLVIGLVAYGAYRFFAG* |
Ga0068865_1004502752 | 3300006881 | Miscanthus Rhizosphere | MSTPNMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG* |
Ga0105245_127926342 | 3300009098 | Miscanthus Rhizosphere | VSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG* |
Ga0075418_100295696 | 3300009100 | Populus Rhizosphere | MDMSTPSTAQSLDGALDASVVRKTSVVRDARERDDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWLVIGLVAYGAYRFFAG* |
Ga0114129_134700911 | 3300009147 | Populus Rhizosphere | MDMSTPSTAQSLDGALDASVIRGTSVVRDGRERDDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWLVIGLVAYGAYRFFAG* |
Ga0105242_100889393 | 3300009176 | Miscanthus Rhizosphere | MSTPDMAQRLDGAIDVSVVGETSLVRDRRERENLREPDTAAHESTNDVPMQFVRLGLPVTIFLWFVFVLLAYGAYRFFAG* |
Ga0105238_113019352 | 3300009551 | Corn Rhizosphere | LDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHGSTDDIPMQFVLLGLPAAIFLWFVVVLV |
Ga0105249_119226572 | 3300009553 | Switchgrass Rhizosphere | MSTPDMAQRLDGAIDVSVVGETSVVRDLREPDTAAHESVNDIPMQFVRLGLPVSIFLWFVVVLVAYGAYRFLAG* |
Ga0126307_1000052921 | 3300009789 | Serpentine Soil | MDMSTPSTAHSLDGALDASVVRETSVIRDGREREDLGEPDIAASLAFTNEIPMQFVRLGLPAAIFLWFVIGLVAYGAYRFFAG* |
Ga0126313_103767452 | 3300009840 | Serpentine Soil | MDMSTPSTAHSLDGALDASVVRETSVIRDGRERDDLGEPDIAASLAFTNEIPMQFVRLGLPAAIFLWFVIGLVAYGAYRFFAG* |
Ga0126315_107807081 | 3300010038 | Serpentine Soil | MDMSTPSTAHSLDGALDASVVRETSVIRDGRERDDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWFVIGLVAYGAYRFFAG* |
Ga0126308_100363043 | 3300010040 | Serpentine Soil | MDMSTPSTAHSLDGALDASVVRETSVIRDGRERDDFGEPDIAASLAFTNEIPMQFVRLGLPAAIFLWFVIGLVAYGAYRFFAG* |
Ga0126312_102679241 | 3300010041 | Serpentine Soil | IMDMSTPSTAHSLDGALDASVVRETSVIRDGRERDDLGEPDIAASLAFTNEIPMQFVRLGLPAAIFLWFVIGLVAYGAYRFFAG* |
Ga0126311_100349644 | 3300010045 | Serpentine Soil | MDMSTPSTAHSLDGALDASVVRGTGVVRDGRERDDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWFVIGLVAYGAYRIFAG* |
Ga0127447_10573281 | 3300010136 | Grasslands Soil | QNLDDAVDIPVVGETRVVRDGREQDDFGEPSIAGSPESTNEFPMQFVRLGVPAAIFLWLVLGLVAYGAYRFFAG* |
Ga0126319_15473541 | 3300010147 | Soil | MDMSTPSTAQSLDGAVDASVVRKTNVVRDGRERDDLGEPDIAASLESTNEVPMQFVRLGLPAAICLWLVIGLVAYGAYRFFAG* |
Ga0134128_106980722 | 3300010373 | Terrestrial Soil | LDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHESTNDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG* |
Ga0105239_115293511 | 3300010375 | Corn Rhizosphere | MAQRLDGAIDVSVVGETSVVRDQRERDDVRESDTATHESTNDVPMQFVRLGLPAAIFLWFVFVLLAYGAYRFFTG* |
Ga0134124_100387404 | 3300010397 | Terrestrial Soil | MSTHDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG* |
Ga0134127_111183572 | 3300010399 | Terrestrial Soil | MSTSDMAQRLDGAIDVSVVGETSVVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLLAYGAYRFFAG* |
Ga0134122_102187141 | 3300010400 | Terrestrial Soil | MSTHDMAQRLDGAIDVSVVGETSVVRDQRARDDLRESDTATHESTNDVPMQFVRLGLPAAIFLWFVFVLLAYGAYRFFAG* |
Ga0134123_105555152 | 3300010403 | Terrestrial Soil | MSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG* |
Ga0105246_108565621 | 3300011119 | Miscanthus Rhizosphere | RANILDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHGSTDDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG* |
Ga0127502_101614012 | 3300011333 | Soil | MDMSTPSTAQSLDGALDASVVRGTSVVRDGRERDDVGEPDIAASLESTNEVPMQFVRLGLPVAIFLWFVIGLVAYGAYRFFAG* |
Ga0150985_1085786792 | 3300012212 | Avena Fatua Rhizosphere | MDMSTPSTAQSLDGALDVSVVRETSVAVRHGRERDDLGERDIAASLESTNDLPMQFVRLGLPAAIFLWFVFGLLAYGAYRFFAG* |
Ga0150985_1110320882 | 3300012212 | Avena Fatua Rhizosphere | MDMSTPSTAQSLDGALDASVRATSVAVRDGRERDALGERDVAASLESTNDIPMQFVRLGLPAAIFLWFVFGLLAYGAYRFFAG* |
Ga0134043_10037692 | 3300012392 | Grasslands Soil | FEQFLAKSTANIMDMSTPSMAQNLDDAVDIPVVGETRVVRDGREQDDFGEPSIAGSPESTNEFPMQFVRLGVPAAIFLWLVLGLVAYGAYRFFAG* |
Ga0134049_13906212 | 3300012403 | Grasslands Soil | MDMSTPSMAQNLDDAVDIPVVGETRVVRDGREQDDFGEPSIAGSPESTNEFPMQFVRLGVPAAIFLWLVLGLVAYGAYRFFAG* |
Ga0134045_13315672 | 3300012409 | Grasslands Soil | MDMSTPSMAQNLDDAVDIPVVGETRVVRDGREQDDFGEPSIAGSPESTNEFPMQFVRLGVPAAIFLWLVLGLVAYGAYRFFAC* |
Ga0134060_11364122 | 3300012410 | Grasslands Soil | MAQNLDDAVDIPVVGETRVVRDGREQDDFGEPSIGGSPESTNEFPMQFVRLGVPAAIFLWLVLGLVAYGAYRFFAG* |
Ga0157281_11098002 | 3300012883 | Soil | MSTPDIAQRLDGAIDVSVVGETSVVRDLRELDTAAHESMNDIPMQFVRLGLPATIFLWFIFVLVAYGAYRFFAG* |
Ga0157305_100705002 | 3300012891 | Soil | MSTPDIAQRLDGAIDVSVVGETSVVRDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG* |
Ga0157285_100932391 | 3300012897 | Soil | DMSTPDIAQRLDGAIDVSVVGETSVVRDLRELDTAAHESMDDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG* |
Ga0157291_100621571 | 3300012902 | Soil | MSTPDIAQRLDGAIDVSVVGETSVVRDLRELDTAAHESMDDIPMQFVRLGLPVTIFLWFVFVLLAYGAYRFFAG* |
Ga0157301_100029472 | 3300012911 | Soil | MSTPDIAQRLDGAIDVSVVGETSVVRDLREPDTAADESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG* |
Ga0157378_105371851 | 3300013297 | Miscanthus Rhizosphere | LDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHGSTDDIPMQFVRLGLPATIFLWFVFFLVAYGAYRFLAG* |
Ga0157378_129838001 | 3300013297 | Miscanthus Rhizosphere | MSTHDMAQRLDGAIDVSVVVETGVVRGRREREALRESEAAHESTNDVPMQFVRLGLPVTIFLWFVFVLLAYGAYRFFAG* |
Ga0157372_123701791 | 3300013307 | Corn Rhizosphere | MSTPDMAQRLDGAIDVSVVGETSVVRDRRERENLRESDTATHESTNDVPMQFVRLGLPAAIFLWFVFVLLAYGAYRFFAG* |
Ga0157375_137043121 | 3300013308 | Miscanthus Rhizosphere | PDIAQRLDGAIDVSVVGETSVVRDLREPDTAAHASMNDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG* |
Ga0157380_104393721 | 3300014326 | Switchgrass Rhizosphere | MSTPNMAQRLDGAIDVSVVGETSVVRDRRERDDLRERETAAHESMNDIPMQFVRLGLPATIFLWFVFVLLAYGAYRFFAG* |
Ga0157380_111497381 | 3300014326 | Switchgrass Rhizosphere | LDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNRLREPDTAASHESTNDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG* |
Ga0173478_107804571 | 3300015201 | Soil | MSTPDIAQRFDGAIDVSVVGETSVVRDLRELDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRF |
Ga0132256_1000709811 | 3300015372 | Arabidopsis Rhizosphere | MSTPDMAQRLDGAIDVSVVGETGVVRDRREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG* |
Ga0132257_1000301844 | 3300015373 | Arabidopsis Rhizosphere | MNTPDMAQRLDGAIDVSVVGETGVVRDRREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG* |
Ga0132255_1001130521 | 3300015374 | Arabidopsis Rhizosphere | MNTPDMAQRLDGAIDVSVVGETGVVRDRREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFAG* |
Ga0190266_100038384 | 3300017965 | Soil | MDMSTPSTAQSLDGAVDASVVRKPNVVRDGRERDDLGEPDIAASPGSTNEVPMQFVRLGLPAAIFLWLVIGLVAYGAYRFFAG |
Ga0184624_101434331 | 3300018073 | Groundwater Sediment | LDVSTPNTAPSLEGALDVSVVGETNVVRDRRERDHLREPDTAASHESTNDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG |
Ga0190269_108609152 | 3300018465 | Soil | MDMSTPSTAQSLDGAVDASVVRKTSVVRDARERGDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWLVIGLVAYGAYRFFAG |
Ga0190268_108386931 | 3300018466 | Soil | MDMSTPSTAQSLDGAVDASVVRKTSVVRDARERDDLGEPDIAASLESTNEVPMQFVRLGLPATIFLWFVFVLVAYGAYRFF |
Ga0190270_1000137810 | 3300018469 | Soil | MDMSTPSTAQSLDGAVHASVVRKTSVVRDARERDDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWLVIGLVAYGAYRFFAG |
Ga0173481_100026385 | 3300019356 | Soil | MSTPDIAQRLDGAIDVSVVGETSVVRDLRELDTAAHESMNDIPMQFVRLGLPVSIFLWFVAVLVAYGAYRFFAG |
Ga0190267_100004508 | 3300019767 | Soil | MDMSTPSTAQSLDGAVDASVVRKTSVVRDARERDDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWLVVGLVAYGAYRFFAG |
Ga0207697_103849222 | 3300025315 | Corn, Switchgrass And Miscanthus Rhizosphere | LDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHGSTNDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG |
Ga0207688_100330982 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | LDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHGSTDDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG |
Ga0207660_106330262 | 3300025917 | Corn Rhizosphere | MSTSDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG |
Ga0207657_109177331 | 3300025919 | Corn Rhizosphere | VDMSTSDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFLAG |
Ga0207690_105301601 | 3300025932 | Corn Rhizosphere | DGAIDVSVVGETGAVRDRRERDDLREPDTAGHESMNDIPMQFVRLGLPVTIFLWFVFVLLAYGAYRFFAG |
Ga0207709_111335312 | 3300025935 | Miscanthus Rhizosphere | MSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFT |
Ga0207704_106472672 | 3300025938 | Miscanthus Rhizosphere | MSTPNMAQRLDGAIDVSVVGETSVVRDRRERDDLRERETAAHESMNDIPMQFVRLGLPAAIFLWFVFVLLAYGAYRFFAG |
Ga0207679_104347401 | 3300025945 | Corn Rhizosphere | MSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG |
Ga0207712_101334202 | 3300025961 | Switchgrass Rhizosphere | VSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASHGSTDDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG |
Ga0207668_102998402 | 3300025972 | Switchgrass Rhizosphere | LDVSTPNTAPSLEGAFDVSVVGETNVVRDRRERNHLREPDTAASRGSTDDIPMQFVLLGLPAAIFLWFVVVLVAYGAYRFLAG |
Ga0207708_101193542 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | MSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFFLVAYGAYRFFAG |
Ga0207648_101759152 | 3300026089 | Miscanthus Rhizosphere | MSTPDMAQRLDGAIDVSVVGETGAVRDRRERDDLREPDTAGHESMNDIPMQFVRLGLPATIFLWFVFVLAAYGAYRFFTG |
Ga0207562_10073742 | 3300027446 | Soil | LDMSTPDIAQRLDGAIDVSVVGETSVVRDLREPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG |
Ga0207428_100050038 | 3300027907 | Populus Rhizosphere | MDMSTPSTAQSLDGALDASVVRKTSVVRDARERGDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWLVIGLVAYGAYRFFAG |
Ga0307301_100141641 | 3300028719 | Soil | MSTPNTAQSLEGAFDVSVVGETSVVRDRRERDHLREPDTAASHESTSDIPMQFVRLGLPAAIFLWFVFGLAAYGAYRFFAG |
Ga0307316_103850371 | 3300028755 | Soil | LDMSTPNTAQSLEGAFDVSVVGETSVVRDRRERDHLREPDTAASHESTSDIPMQFVRLGLPAAIFLWFVFGLAAYGAYRFFAG |
Ga0307288_103783021 | 3300028778 | Soil | MDMSTPSTAQSLDGALDAPVRETSVVRNGRERDDLGERDIAASLESTNEVPMQFVRLGLPAAIFLWFVIGLVAYGAYRFLAG |
Ga0307292_100743471 | 3300028811 | Soil | MSTPNTAQSLEGAFDVSVVGETSVVRDRRERDHLREPDTAASHESTSDIPMQFVRLGLPAAIFLWFVFGLAA |
Ga0307277_100592991 | 3300028881 | Soil | MDMSTPSTAQSLDGALDAPVRETSVVRNGRESDDLGERDIAASLESTNEVPMQFVRLGLPAAIFLWFVIGLVAYGAYRFLAG |
Ga0308204_100292101 | 3300031092 | Soil | LEGAFDVSVVGETSVVRDRRERDHLREPDTAASHESTSDIPMQFVRLGLPAAIFLWFVFGLAAYGAYRFFAG |
Ga0307408_1002349912 | 3300031548 | Rhizosphere | MDMSTPSTAQSLDGALDASVVRETSVVRDGRERDALGEPDIAASLESTNEVPMQFVRLGLPAAIFLWFVIGLVAYGAYRFFAG |
Ga0310886_106462521 | 3300031562 | Soil | MDMSTPSTAQSLDGALDASVVRKTSVVRDARERDDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWLVIGLVAYGAYRFFAG |
Ga0307405_108434521 | 3300031731 | Rhizosphere | MDMSTPSTAHSLDGALDASVVRETSVIRDGRERDDLGEPDIAASLASTNEIPMQFVRLGLPAAIFLWFVIGLVAYGAYRFFAG |
Ga0307405_116351681 | 3300031731 | Rhizosphere | MDMSTPSTAQSLDGALDASVVRETSVVRDGRERDALGEPDIAASLESTNEVPMQFVRLGLPVAIFLWFVIGL |
Ga0307413_104713172 | 3300031824 | Rhizosphere | MDMSTPSTAHSLDGALDGSVVMGTSVIRDGRERDDLGEPDIAASLASTNEIPMQFVRLGLPTAIFLWFVIGLVAYGAYRFFAG |
Ga0307412_112292362 | 3300031911 | Rhizosphere | DMSTPSTAQSLDGALDASVVRETSVIRDGRERDDLGEPDIAASLASTNEIPMQFVRLGLPAAIFLWFVIGLVAYGAYRFFAG |
Ga0308175_1008728691 | 3300031938 | Soil | ALDASVRETSVVRDGRERDDLGERDIAASPESTNDVPMQFVRLGLPAAIFLWFVIGLVAYGAYRFLTG |
Ga0310885_102613122 | 3300031943 | Soil | MDMSTPSTAQSLDGAVDASVVRKTSVVRDARERDDLGEPDIAASLESTNEVPMQFVRLGLPAAIFLWLVIGLVAYGAYRFLAG |
Ga0307409_1000078223 | 3300031995 | Rhizosphere | MDMSTPSTAHSLDGALDGSVVMGTSVIRDGRERDDLGEPDIAASLASTNEIPMQFVRLGLPAAIFLWFVIGLVAYGAYRFFAG |
Ga0314781_033410_55_306 | 3300034660 | Soil | MDMSTPSTAQSLDGALDASVVRKTSVVRDARERDDLGEPDIAASLESTNEVPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG |
Ga0314783_095743_389_613 | 3300034662 | Soil | MSTPDMAQRLDGAIDVSVVGETGLLRDRPEPDTAAHESMNDIPMQFVRLGLPATIFLWFVFVLVAYGAYRFFAG |
Ga0370541_004086_2_226 | 3300034680 | Soil | AQSLDGALDAPVRETSVVRNGRERDDLGEREIAASLESTNEVPMQFVRLGLPAAIFLWFVIGLVAYGAYRFLAG |
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