Metagenome / Metatranscriptome Family F091566

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091566
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	77 residues
Representative Sequence	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVGDRMLGYLRAP
Number of Associated Samples	71
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.50 %
% of genes near scaffold ends (potentially truncated)	41.12 %
% of genes from short scaffolds (< 2000 bps)	85.98 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.393 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.776 % of family members)
Environment Ontology (ENVO)	Unclassified (53.271 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.355 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 70.89% β-sheet: 0.00% Coil/Unstructured: 29.11%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF02735	Ku	12.15
PF04392	ABC_sub_bind	5.61
PF11295	DUF3096	2.80
PF03734	YkuD	1.87
PF13417	GST_N_3	0.93
PF03330	DPBB_1	0.93
PF00149	Metallophos	0.93
PF09929	DUF2161	0.93
PF12071	DUF3551	0.93
PF07978	NIPSNAP	0.93
PF13276	HTH_21	0.93
PF07040	DUF1326	0.93
PF10108	DNA_pol_B_exo2	0.93
PF00383	dCMP_cyt_deam_1	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	12.15
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	5.61
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.87
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.87
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.39 %
Unclassified	root	N/A	5.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.39 %
Unclassified	root	N/A	5.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.39 %
Unclassified	root	N/A	5.61 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	83.18 %
Unclassified	root	N/A	5.61 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.87 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	81.31 %
Unclassified	root	N/A	5.61 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	1.87 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	66.36 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.41 %
Unclassified	root	N/A	5.61 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1.87 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	66.36 %
Unclassified	root	N/A	5.61 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.74 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1.87 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	66.36 %
Unclassified	root	N/A	5.61 %
Leptospirillum	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Leptospirillum	1.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.87 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	66.36 %
Unclassified	root	N/A	5.61 %
Leptospirillum sp. Group II	species group	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Leptospirillum → Leptospirillum sp. Group II	1.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.87 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	66.36 %
Unclassified	root	N/A	5.61 %
Leptospirillum sp. Group II 'C75'	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Leptospirillum → Leptospirillum sp. Group II → Leptospirillum sp. Group II 'C75'	1.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.87 %
Methylobacterium sp. B34	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. B34	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1007500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1771	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1014917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. B34	1247	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1063225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	655	Open in IMG/M
3300000789\|JGI1027J11758_13012631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10020165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1597	Open in IMG/M
3300001867\|JGI12627J18819_10127570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1043	Open in IMG/M
3300004629\|Ga0008092_11352200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	825	Open in IMG/M
3300004633\|Ga0066395_10222349	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300005332\|Ga0066388_100468726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1899	Open in IMG/M
3300005332\|Ga0066388_101269121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1266	Open in IMG/M
3300005332\|Ga0066388_103885103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	762	Open in IMG/M
3300005363\|Ga0008090_10139836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	649	Open in IMG/M
3300005363\|Ga0008090_10157384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1294	Open in IMG/M
3300005363\|Ga0008090_10239221	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Leptospirillum → Leptospirillum sp. Group II → Leptospirillum sp. Group II 'C75'	575	Open in IMG/M
3300005713\|Ga0066905_100158418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1641	Open in IMG/M
3300005713\|Ga0066905_100560970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	960	Open in IMG/M
3300005713\|Ga0066905_101230620	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300005713\|Ga0066905_101321482	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Leptospirillum → Leptospirillum sp. Group II → Leptospirillum sp. Group II 'C75'	649	Open in IMG/M
3300005713\|Ga0066905_102325234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300005764\|Ga0066903_101315581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1351	Open in IMG/M
3300005764\|Ga0066903_101553263	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300005764\|Ga0066903_101691252	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300005764\|Ga0066903_103013765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	912	Open in IMG/M
3300005764\|Ga0066903_104079906	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300005764\|Ga0066903_105063226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	699	Open in IMG/M
3300005764\|Ga0066903_109060709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300006844\|Ga0075428_100045581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4817	Open in IMG/M
3300006939\|Ga0081244_1486677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300009792\|Ga0126374_10340126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1024	Open in IMG/M
3300009792\|Ga0126374_11326738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300010043\|Ga0126380_10043206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2381	Open in IMG/M
3300010043\|Ga0126380_10361729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1061	Open in IMG/M
3300010046\|Ga0126384_11788157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300010047\|Ga0126382_10033927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2833	Open in IMG/M
3300010047\|Ga0126382_10459898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1011	Open in IMG/M
3300010048\|Ga0126373_12696441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300010359\|Ga0126376_12400074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300010360\|Ga0126372_10615119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1045	Open in IMG/M
3300010360\|Ga0126372_12300022	Not Available	589	Open in IMG/M
3300010361\|Ga0126378_11545952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	753	Open in IMG/M
3300010361\|Ga0126378_11646101	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300010361\|Ga0126378_11839137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	689	Open in IMG/M
3300010366\|Ga0126379_11330734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	824	Open in IMG/M
3300010366\|Ga0126379_12984550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300010366\|Ga0126379_13825681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300010376\|Ga0126381_100618942	Not Available	1542	Open in IMG/M
3300010376\|Ga0126381_103116415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	657	Open in IMG/M
3300010376\|Ga0126381_103346916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	632	Open in IMG/M
3300010398\|Ga0126383_10521486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1250	Open in IMG/M
3300010398\|Ga0126383_13691352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300012211\|Ga0137377_10749145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	910	Open in IMG/M
3300012582\|Ga0137358_10866750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300012948\|Ga0126375_10050554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2211	Open in IMG/M
3300012948\|Ga0126375_10371708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1022	Open in IMG/M
3300012958\|Ga0164299_10184855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1189	Open in IMG/M
3300012960\|Ga0164301_10885694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	691	Open in IMG/M
3300012987\|Ga0164307_11526973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	565	Open in IMG/M
3300016294\|Ga0182041_10612924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	957	Open in IMG/M
3300016341\|Ga0182035_11849255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300020579\|Ga0210407_10061476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2813	Open in IMG/M
3300020581\|Ga0210399_11014119	Not Available	668	Open in IMG/M
3300021560\|Ga0126371_12006133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300021560\|Ga0126371_12241511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	659	Open in IMG/M
3300027548\|Ga0209523_1115946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300027576\|Ga0209003_1040004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	817	Open in IMG/M
3300027874\|Ga0209465_10476033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	624	Open in IMG/M
3300031543\|Ga0318516_10022085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3265	Open in IMG/M
3300031543\|Ga0318516_10374046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	822	Open in IMG/M
3300031543\|Ga0318516_10444545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	745	Open in IMG/M
3300031543\|Ga0318516_10839536	Not Available	518	Open in IMG/M
3300031545\|Ga0318541_10057590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2010	Open in IMG/M
3300031572\|Ga0318515_10023728	All Organisms → cellular organisms → Bacteria	2927	Open in IMG/M
3300031680\|Ga0318574_10133253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1402	Open in IMG/M
3300031681\|Ga0318572_10016342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3642	Open in IMG/M
3300031719\|Ga0306917_10052804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2741	Open in IMG/M
3300031736\|Ga0318501_10149097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1202	Open in IMG/M
3300031736\|Ga0318501_10227619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	982	Open in IMG/M
3300031744\|Ga0306918_10597910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	864	Open in IMG/M
3300031744\|Ga0306918_10940336	Not Available	672	Open in IMG/M
3300031763\|Ga0318537_10108806	All Organisms → cellular organisms → Bacteria → Proteobacteria	1027	Open in IMG/M
3300031764\|Ga0318535_10167609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	981	Open in IMG/M
3300031768\|Ga0318509_10020572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3080	Open in IMG/M
3300031770\|Ga0318521_10985812	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300031771\|Ga0318546_10014485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4328	Open in IMG/M
3300031777\|Ga0318543_10191300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	907	Open in IMG/M
3300031782\|Ga0318552_10135590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1232	Open in IMG/M
3300031792\|Ga0318529_10013860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3075	Open in IMG/M
3300031795\|Ga0318557_10431501	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300031860\|Ga0318495_10033717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2240	Open in IMG/M
3300031860\|Ga0318495_10065325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1619	Open in IMG/M
3300031879\|Ga0306919_10241055	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300031879\|Ga0306919_10532492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	906	Open in IMG/M
3300031890\|Ga0306925_11110912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	798	Open in IMG/M
3300031896\|Ga0318551_10223905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1046	Open in IMG/M
3300031897\|Ga0318520_11016335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300031941\|Ga0310912_10279722	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300031942\|Ga0310916_10385990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1191	Open in IMG/M
3300031946\|Ga0310910_10493841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	971	Open in IMG/M
3300032035\|Ga0310911_10154799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1291	Open in IMG/M
3300032041\|Ga0318549_10077838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1416	Open in IMG/M
3300032054\|Ga0318570_10489540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300032068\|Ga0318553_10164853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1150	Open in IMG/M
3300032091\|Ga0318577_10615999	Not Available	515	Open in IMG/M
3300032180\|Ga0307471_100123933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2416	Open in IMG/M
3300032261\|Ga0306920_100497303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1809	Open in IMG/M
3300032261\|Ga0306920_101861695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	847	Open in IMG/M
3300033289\|Ga0310914_10215019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1719	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.07%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.37%
Loam	Environmental → Terrestrial → Soil → Loam	18.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.69%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	4.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	24.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.35%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006939	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A10 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10075003	3300000580	Forest Soil	MIDEYFVSSSTLHRNERVKLAAMFWNIVGAGMFIGGXAGAFFYEGPLFWXXVGIAVVGIVLALIFXRVGDRILXYLRAP*
AF_2010_repII_A01DRAFT_10149171	3300000580	Forest Soil	MLDEYFASSSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVGDRMLGYLRAP*
AF_2010_repII_A100DRAFT_10632251	3300000655	Forest Soil	MIDEYFASSSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWSRVGIAVLGIVLALIFQRVGDRIL
JGI1027J11758_130126311	3300000789	Soil	MLEEYFESSSTLLRDERVKLAAMFWNIVGAGMLIGGVAGAFFFEGPLFWGKVGIAIVGIVLSLIFQRVGDRVLGYLRAP*
AF_2010_repII_A001DRAFT_100201654	3300000793	Forest Soil	MIDEYFVSSSTLHRNERVKLAALFWNIVGAGMFIGGLAGAFFYEGPLFWSRVGIAVLGIVLALIFQRVGDRILGY
JGI12627J18819_101275702	3300001867	Forest Soil	MLDEYFVSSSTLQRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWGKVGIAVVGIVVALIFQRVGDRMLGYLRAP*
Ga0008092_113522002	3300004629	Tropical Rainforest Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWSRVGIAVLGIVLALIFQRVGDRILGYLRAP*
Ga0066395_102223492	3300004633	Tropical Forest Soil	MLDEYFVSNSTLQRNERVKLAAMFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVGDRMLGYLRAP*
Ga0066388_1004687262	3300005332	Tropical Forest Soil	MLEEYFGSSSTLLRNERVKLAAMFWNIVGAGMLIGGVAGAFFFEGPLFWGKVGIVVVGTVLALIFQRVGDRILSYLRAP*
Ga0066388_1012691212	3300005332	Tropical Forest Soil	MLDEYFVSNSTLQRNERVKLAAMFWNIVGAGMFIGGVAGAFFYEGPLFWSRVGIAVLGIVLALIFQRVGDRILGYLRAP*
Ga0066388_1038851032	3300005332	Tropical Forest Soil	MLEEYFESSSTLQRNERVKLAAMFWNIVGAGMLIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFQRVGDRILGYVRAP*
Ga0008090_101398362	3300005363	Tropical Rainforest Soil	MIDEYFASSSTLHRNERVKLAAMFWNIVGAGMFIGGLAGAFFYEGPLFWSRVGIAVLGIVLALIFQRVGDRILGYAHGAEAGDR*
Ga0008090_101573841	3300005363	Tropical Rainforest Soil	MLDEYFASSSTLQRNERVKLAAMFWNIVGAGMFIGGVAGAFFYEGPLFWSRVGIAVLGIVLALIFQRVGDRILGYLRAP*
Ga0008090_102392211	3300005363	Tropical Rainforest Soil	MLDAYFVSSSTLHRNERVKLAALFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVGDRMLGYLRAP*
Ga0066905_1001584182	3300005713	Tropical Forest Soil	MLEEYFGSSSTLLRNERVKLAAMFWNIVGAGMLIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFQRVGDRILGYVRAP*
Ga0066905_1005609702	3300005713	Tropical Forest Soil	MLEEYFGSSSTLQRNERVKLAAMFWNIVGAGMLIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFQRIGDRMLGYLRAP*
Ga0066905_1012306202	3300005713	Tropical Forest Soil	MLDEYFVSDSTLQRNERVKLAAIFWNIVGAGMFIGGLAGAFFYEGPLFWGKVGIAVLGIVLALIFQRVGDRILGYLRAP*
Ga0066905_1013214821	3300005713	Tropical Forest Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFQRVGDRILSYLRAP*
Ga0066905_1023252342	3300005713	Tropical Forest Soil	EYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFQRVGDRLLGYLRAP*
Ga0066903_1013155812	3300005764	Tropical Forest Soil	MLEEYFGSSSTLLRNERVKLAAMFWNIVGAGMLIGGVAGAFFFEGPLFWGKVGIAVVGVVLALIFQRVGDRILSYLRAP*
Ga0066903_1015532631	3300005764	Tropical Forest Soil	LIMLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVGDRLLSYLRAP*
Ga0066903_1016912522	3300005764	Tropical Forest Soil	MLDAYFVSNSTLHRNERVKLAARFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVGDRILGYLGAP*
Ga0066903_1030137651	3300005764	Tropical Forest Soil	MLDEYFASSSTLQRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWSRVGIAVLGIVLALIFQRVGDRILGYLRAP*
Ga0066903_1040799061	3300005764	Tropical Forest Soil	MLDAYFVSSSTLHRNERVKLAALFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVGDRLLGYLRAQ*
Ga0066903_1050632261	3300005764	Tropical Forest Soil	MLEEYFASSSTLHRNERVKLAALFWNIVGAGMFIGGLAGAFFYEGPLFWSRVGIAVLGIVLALIFQRVGDRILGYLRAP*
Ga0066903_1090607091	3300005764	Tropical Forest Soil	MLDAYFVSSSTLHRNERVKLAAMFWNIVGAGMLIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVGDRM
Ga0075428_1000455812	3300006844	Populus Rhizosphere	MLEDFFASSSTPLVRNERVKLAAMFWSIAGAGMLIGGVAGAFFFEGPLFWGKVGIAIVGIVLASIFYLVGDRMLGYLRTP*
Ga0081244_14866771	3300006939	Tropical Rainforest Soil	SYRGRLIMLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVGDRLLGYLRAQ*
Ga0126374_103401261	3300009792	Tropical Forest Soil	MLDEYFVSNSTLQRNERVKLAAMFWNIVGAGMLIGGVAGAFFFEGPLFWGKVGIVVVGTVLALIFQRVGDRILSYLRAP*
Ga0126374_113267381	3300009792	Tropical Forest Soil	MLDEYFVSDSTLQRNERVKLAAMFWNIVGAGMFIGGLAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVGDRILGYLRAP*
Ga0126380_100432063	3300010043	Tropical Forest Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVGDRMLGYLRAP*
Ga0126380_103617292	3300010043	Tropical Forest Soil	MLEEYFGSSSTLQRNERVKLAAMFWNIVGAGMLIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVGDRMLYRVPEIV
Ga0126384_117881572	3300010046	Tropical Forest Soil	MVMLEEIFRSDSTLQRNERVKLAATFWNNVGAGMLIGGVAGAFYLEKPLFWGKVGIAVVGIVLALFFYSVGNRILGLPRPLLN*
Ga0126382_100339275	3300010047	Tropical Forest Soil	RNERVKLAAMFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVGDRLLGYLRAP*
Ga0126382_104598981	3300010047	Tropical Forest Soil	MLEEYFGSSSTLQRNERVKLAAMFWNIVGAGMLIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVGDRILGYLRAP*
Ga0126373_126964412	3300010048	Tropical Forest Soil	MLDEYFASSSTLHRNERVKLAAMFWNIVGAGMLIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVGDRMLGYLRAP*
Ga0126376_124000741	3300010359	Tropical Forest Soil	MLDEYFAASSSTLHRNERVKLTAMFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVGDRMLGYLRAP*
Ga0126372_106151191	3300010360	Tropical Forest Soil	MVDEYFVSSSTLHRNERVKLAAMFWNIVGAGMFIGGLAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVGDRILGYLRAP*
Ga0126372_123000221	3300010360	Tropical Forest Soil	MLDAYFVSSSTLHRNERVKLAALFWNIVGAGIEGPLFWGKVGIAVVGMVLALIFQRVGDRLLGYLRAP*
Ga0126378_115459522	3300010361	Tropical Forest Soil	MVMLEEYFGSSSTLLRNERVKLAAMFWNVVGAGMLIGGVAGAFFFEGPLFWGKAGIAVVGIVLALIFQRVGDRILSYLRAP*
Ga0126378_116461011	3300010361	Tropical Forest Soil	MLDEYFAGSSTLQRNERVKLAAMFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIIQRVGDRILGNFR
Ga0126378_118391371	3300010361	Tropical Forest Soil	MLEEYFGSSSTLQRNERVKLAAMFWNIVGAGMLIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVG
Ga0126379_113307342	3300010366	Tropical Forest Soil	MLDEYFASSSTLQRNERVKLAAMFWNIVGAGMLIGGVAGAFFFEGPLFWGKVGIAVVGIVLALISNELATAC*
Ga0126379_129845501	3300010366	Tropical Forest Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALI
Ga0126379_138256811	3300010366	Tropical Forest Soil	RLIMLDAYFVSSSTLHRNERVKLAALFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFHRVGDRILSYLRAP*
Ga0126381_1006189422	3300010376	Tropical Forest Soil	MIDEYFVSSSTLHRNERVKLAAMFWNIVGAGMFIGGLAGAFFYEGPLFWSRVGIAVLGIVLALIFQRVGDRILGYLRAP*
Ga0126381_1031164151	3300010376	Tropical Forest Soil	ERVKLAATFWSNVAAGMLIGGVAGAFFLEKPHFWGKVGIAILAIVLAYIFHRIGNHLLGYMGAP*
Ga0126381_1033469161	3300010376	Tropical Forest Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVGDRMLGYL
Ga0126383_105214862	3300010398	Tropical Forest Soil	MLDAYFVSSSTLHRNERVKLAALFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFHRVGDRILSYLRAP*
Ga0126383_136913521	3300010398	Tropical Forest Soil	MIDEYFVSSSTLHRNERVKLAALFWNIVGAGMFIGGLAGAFFYEGPLFWSRVGIAVLGIVLALIFQR
Ga0137377_107491451	3300012211	Vadose Zone Soil	MLEEYFGSSSTLQRNERVKLAAMFWNIVGAGMLIGGVAGAFFFEGPLFWSRVGIEVVGIVLGLIFQRVGDRIL
Ga0137358_108667501	3300012582	Vadose Zone Soil	PLVRNERVKLAATFWNNVGAGMLIGGVAGAFYLQKPLFWGKVGIAIVGIALAVFCYSVGNRMLGYLRTP*
Ga0126375_100505544	3300012948	Tropical Forest Soil	EEYFGSSSTLQRNERVKLAAMFWNIVGAGMLIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVGDRMLGYLRAP*
Ga0126375_103717082	3300012948	Tropical Forest Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFYEGPLFWSRVGIAVLGIVLALIFQRVGDRLLGYLRAQ*
Ga0164299_101848551	3300012958	Soil	MLENYFESSSTLARNERVKLAAMFWNNVGAGMLIGGVAGAFYLEKPLFWGKAGIAIVGIALAVFCYSIGNRMLGYLRAPLPSGSSD*
Ga0164301_108856941	3300012960	Soil	MLENYFESSSTLARNERVKLAAMFWNNVGAGMLIGGVAGAFYLQKPLFWGKAGIAIVGIALAVFCYSINNRMLGYLRAPLPSGSSD*
Ga0164307_115269731	3300012987	Soil	MLENYFESSSTLARNERVKLAAMFWNNVGAGMLIGGVAGAFYLQKPLFWGKAGIAIVGIALAVFCYSIGNRML
Ga0182041_106129242	3300016294	Soil	SSTLHRNERVKLAALFWNIVGAGMFIGGVAGAFFFEGPLFWSRVGIAVLGIVLALVFQRVGDRMLGYLRAP
Ga0182035_118492551	3300016341	Soil	MLEEFFGSGPTRNERVKLAASFWNNVGAGMLIGGVAGAFFLEKPLFWGKIGIAIVGIVFGFICYSVANRMLDYLRTP
Ga0210407_100614762	3300020579	Soil	MLENYFESSSTLARNERVKLAAMFWNNVGAGMLIGGVAGAFYLQKPLFWGKAGIAIVGIALAVFCYSIGNRMLGYLRAPLPSGSSD
Ga0210399_110141191	3300020581	Soil	MLENYFESSSTLARNERVKLAAMFWTNVGAGMLIGGVAGAFYLQKPLFWGKAGIAIVGIALAVFCYSIGNRMLGYLRAPLPSGSSD
Ga0126371_120061331	3300021560	Tropical Forest Soil	MIDEYFVSSSTLHRNERVKLAALFWNIVGAGMFIGGLAGAFFYEGPLFWSRVGIAVLGIVLALIFQRVGDRILGYLRAP
Ga0126371_122415111	3300021560	Tropical Forest Soil	MVDEYFAASSSTLHRNERVKLVAMFWNIVGAGMFIGGVAGAFFYEGPLFWDRVGIAVVGIVLALIFQRVGDRMLSHLRAP
Ga0209523_11159462	3300027548	Forest Soil	MLDEYFVSSSTLQRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFQRVGDRMLGYLRAP
Ga0209003_10400042	3300027576	Forest Soil	MLDEYFVSSSTLQRNERVKLAAMFWNIVGAGMFIGGVAGAFFIEGPLFWGKVGIAVVGIVLALIFQRVGDRMLGYLRAP
Ga0209465_104760332	3300027874	Tropical Forest Soil	MLDEYFVSNSTLQRNERVKLAAMFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFHRVGDRILSYLRAP
Ga0318516_100220852	3300031543	Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFHRVGDRILSYLRAP
Ga0318516_103740461	3300031543	Soil	SNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWSRVGIAVLGIVLALVFQRVGDRMLGYLRAP
Ga0318516_104445451	3300031543	Soil	MLAAYFVSSSTLHRNERVKLAALFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFHRVGDRILSYLRAP
Ga0318516_108395361	3300031543	Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAAMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFQRVGDRL
Ga0318541_100575902	3300031545	Soil	MLDAYFVSSSTLHRNERVKLAALFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFHRVGDRILSYLRAP
Ga0318515_100237283	3300031572	Soil	MLEEYFGSSSTLQRNERVKLAAMFWNIVGAGMLIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFQRIGDRM
Ga0318574_101332531	3300031680	Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFHRVGDRILSYL
Ga0318572_100163423	3300031681	Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWSRVGIAVLGIVLALIFQRVGDRLLGYLRAP
Ga0306917_100528041	3300031719	Soil	MLDAYFVSSSTLHRNERVKLAALFWNIVGAGMFIGGVAGAFFYKGLLFWGKVGIAVVGIVLALIFHRVGDRILSYLRA
Ga0318501_101490972	3300031736	Soil	TLHRNERVKLAALFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFHRVGDRILSYLRAP
Ga0318501_102276192	3300031736	Soil	MLEEYFGSSSTLQRNERVKLAAMFWNIVGAGILIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFQRIGDRM
Ga0306918_105979101	3300031744	Soil	MLDAYFVSSSTLHRNERVKLAALFWNIVGAGMFIGGVAGAFFYKGLLFWGKVGIAVVGIVLALIFHRVGDRILSYLRAP
Ga0306918_109403361	3300031744	Soil	NSTLHRNERVKLAAMFWNIVGAAMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFQRVGDRLLGYLLAP
Ga0318537_101088062	3300031763	Soil	YRGRLIMLDAYFVSSSTLHRNERVKLAALFWNIVGAGMFIGGVAGAFFYKGLLFWGKVGIAVVGIVLALIFHRVGDRILSYLRAP
Ga0318535_101676091	3300031764	Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWSRVGIAVLGIVLALVFQRVGDRMLGYLRAP
Ga0318509_100205723	3300031768	Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGLAGAFFYEGPLFWGKVGIAVVGIVLALIFHRVGDRILSYLRAP
Ga0318521_109858121	3300031770	Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAAMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFQRVGDRLLG
Ga0318546_100144852	3300031771	Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFHRVGDRILSYLRAP
Ga0318543_101913002	3300031777	Soil	RLIMLDAYFVSSSTLHRNERVKLAAMFWNIVGAGMLIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFQRIGDRM
Ga0318552_101355901	3300031782	Soil	LHRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFHRVGDRILSYLRAP
Ga0318529_100138602	3300031792	Soil	MLDEYFVSNSTLHRNERVKLAAIFWNIVGAGMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFHRVGDRILSYLRAP
Ga0318557_104315011	3300031795	Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFHR
Ga0318495_100337172	3300031860	Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFQRIGDRM
Ga0318495_100653251	3300031860	Soil	VSNSTLHRNERVKLAAIFWNIVGAGMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFHRVGDRILSYLRAP
Ga0306919_102410552	3300031879	Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAAMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFQRVGDRLLGYLLAP
Ga0306919_105324922	3300031879	Soil	MLEEYFGSSSTLQRNERVKLAAMFWNIVGGGMLIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFQRIGDRM
Ga0306925_111109122	3300031890	Soil	MIDEYFVSSSTLHRNERVKLAAMFWNIVGAGMFIGGLAGAFFYEGPLFWGRVGIAVLGIVLALIFQRVGDRLLGYLRAQ
Ga0318551_102239053	3300031896	Soil	LDEYFVSNINSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFHRVGDRILSYLRAP
Ga0318520_110163351	3300031897	Soil	LDEYFVSSSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFQRVGDRLLGYLRAP
Ga0310912_102797221	3300031941	Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAAMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFQRVGDRLLGYLRAP
Ga0310916_103859903	3300031942	Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFQRVGDRLLGYLLAP
Ga0310910_104938411	3300031946	Soil	MLDAYFVSSSTLHRNERVKLAALFWNIVGAGMFIGGVAGAFFYKGLLFWGKVGIAVVGIVLALIFHRVGDRILSY
Ga0310911_101547991	3300032035	Soil	HRNERVKLAALFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFQRVGDRMLGYLRAP
Ga0318549_100778382	3300032041	Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFHRV
Ga0318570_104895401	3300032054	Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFHRVGDRILS
Ga0318553_101648532	3300032068	Soil	MLDAYFVSSSTLHRNERVKLAALFWNIVGAGMFIGGVAGAFFYKGLLFWGKVGIAVVGIVLALI
Ga0318577_106159991	3300032091	Soil	MLDAYFVSSSTLHRNGRVKLAALFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFHRVGDRILSYLRAP
Ga0307471_1001239333	3300032180	Hardwood Forest Soil	MLDEYFVSSSTLQRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPVFWGKVGIAVVGIVLALIFQRVGDRMLGYLRAP
Ga0306920_1004973031	3300032261	Soil	MLDEYFVSNSTLHRNERVKLAAMFWNIVGAGMFIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFQRVGDRLLGYLRAP
Ga0306920_1018616951	3300032261	Soil	MLDEYFASSSTLQRNERVKLAAMFWNIVGAGMLIGGVAGAFFFEGPLFWGKVGIAVVGIVLALIFQRVGDRMLGYLRAP
Ga0310914_102150191	3300033289	Soil	MLDAYFVSSSTLHRNERVKLAALFWNIVGAGMFIGGVAGAFFYEGPLFWGKVGIAVVGIVLALIFHRVGDR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091566

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences