Metagenome / Metatranscriptome Family F091718

Basic Information
Family ID	F091718
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	108 residues
Representative Sequence	TFTIAALVVFTLGLVVSAIVLKFGTQLATSLGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN
Number of Associated Samples	84
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	6.00 %
% of genes near scaffold ends (potentially truncated)	43.93 %
% of genes from short scaffolds (< 2000 bps)	39.25 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (53.271 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (33.645 % of family members)
Environment Ontology (ENVO)	Unclassified (59.813 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.551 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 77.48% β-sheet: 0.00% Coil/Unstructured: 22.52%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF02776	TPP_enzyme_N	14.95
PF08241	Methyltransf_11	12.15
PF14321	DUF4382	0.93
PF02702	KdpD	0.93
PF01883	FeS_assembly_P	0.93
PF01625	PMSR	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG2205	K+-sensing histidine kinase KdpD	Signal transduction mechanisms [T]	0.93

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.27 %
All Organisms	root	All Organisms	46.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.27 %
cellular organisms	root	All Organisms → cellular organisms	46.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.27 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	46.73 %

Scaffold	Taxonomy	Length	IMG/M Link
3300002560\|JGI25383J37093_10141079	All Organisms → cellular organisms → Archaea	648	Open in IMG/M
3300002562\|JGI25382J37095_10131050	All Organisms → cellular organisms → Archaea	842	Open in IMG/M
3300002908\|JGI25382J43887_10005473	All Organisms → cellular organisms → Archaea	6069	Open in IMG/M
3300002908\|JGI25382J43887_10048764	All Organisms → cellular organisms → Archaea	2301	Open in IMG/M
3300005180\|Ga0066685_10435451	All Organisms → cellular organisms → Archaea	910	Open in IMG/M
3300005180\|Ga0066685_11028893	All Organisms → cellular organisms → Archaea	542	Open in IMG/M
3300005555\|Ga0066692_10776201	All Organisms → cellular organisms → Archaea	590	Open in IMG/M
3300005558\|Ga0066698_10316665	All Organisms → cellular organisms → Archaea	1080	Open in IMG/M
3300006797\|Ga0066659_10801227	All Organisms → cellular organisms → Archaea	779	Open in IMG/M
3300007255\|Ga0099791_10074955	All Organisms → cellular organisms → Archaea	1537	Open in IMG/M
3300007265\|Ga0099794_10284764	All Organisms → cellular organisms → Archaea	855	Open in IMG/M
3300010303\|Ga0134082_10057966	All Organisms → cellular organisms → Archaea	1493	Open in IMG/M
3300010304\|Ga0134088_10102425	All Organisms → cellular organisms → Archaea	1348	Open in IMG/M
3300010333\|Ga0134080_10675631	All Organisms → cellular organisms → Archaea	510	Open in IMG/M
3300011270\|Ga0137391_10618694	All Organisms → cellular organisms → Archaea	906	Open in IMG/M
3300011271\|Ga0137393_10880606	All Organisms → cellular organisms → Archaea	764	Open in IMG/M
3300012198\|Ga0137364_10094528	All Organisms → cellular organisms → Archaea	2094	Open in IMG/M
3300012202\|Ga0137363_10445824	All Organisms → cellular organisms → Archaea	1083	Open in IMG/M
3300012203\|Ga0137399_10024521	All Organisms → cellular organisms → Archaea	4029	Open in IMG/M
3300012203\|Ga0137399_10530593	All Organisms → cellular organisms → Archaea	988	Open in IMG/M
3300012206\|Ga0137380_10533404	All Organisms → cellular organisms → Archaea	1031	Open in IMG/M
3300012206\|Ga0137380_11116903	All Organisms → cellular organisms → Archaea	671	Open in IMG/M
3300012208\|Ga0137376_10361136	All Organisms → cellular organisms → Archaea	1261	Open in IMG/M
3300012209\|Ga0137379_10311606	All Organisms → cellular organisms → Archaea	1485	Open in IMG/M
3300012356\|Ga0137371_10102183	All Organisms → cellular organisms → Archaea	2232	Open in IMG/M
3300012356\|Ga0137371_10948074	All Organisms → cellular organisms → Archaea	654	Open in IMG/M
3300012376\|Ga0134032_1122072	All Organisms → cellular organisms → Archaea	527	Open in IMG/M
3300012397\|Ga0134056_1203828	All Organisms → cellular organisms → Archaea	501	Open in IMG/M
3300012917\|Ga0137395_10860313	All Organisms → cellular organisms → Archaea	657	Open in IMG/M
3300012922\|Ga0137394_11334148	All Organisms → cellular organisms → Archaea	579	Open in IMG/M
3300014154\|Ga0134075_10120240	All Organisms → cellular organisms → Archaea	1115	Open in IMG/M
3300017654\|Ga0134069_1077658	All Organisms → cellular organisms → Archaea	1066	Open in IMG/M
3300018431\|Ga0066655_10095721	All Organisms → cellular organisms → Archaea	1652	Open in IMG/M
3300018468\|Ga0066662_10223675	All Organisms → cellular organisms → Archaea	1512	Open in IMG/M
3300021559\|Ga0210409_10121687	All Organisms → cellular organisms → Archaea	2399	Open in IMG/M
3300025922\|Ga0207646_10540383	All Organisms → cellular organisms → Archaea	1048	Open in IMG/M
3300026296\|Ga0209235_1079165	All Organisms → cellular organisms → Archaea	1472	Open in IMG/M
3300026297\|Ga0209237_1054148	All Organisms → cellular organisms → Archaea	1993	Open in IMG/M
3300026313\|Ga0209761_1076817	All Organisms → cellular organisms → Archaea	1746	Open in IMG/M
3300026317\|Ga0209154_1037230	All Organisms → cellular organisms → Archaea	2213	Open in IMG/M
3300026318\|Ga0209471_1150633	All Organisms → cellular organisms → Archaea	961	Open in IMG/M
3300026333\|Ga0209158_1166511	All Organisms → cellular organisms → Archaea	799	Open in IMG/M
3300026528\|Ga0209378_1089712	All Organisms → cellular organisms → Archaea	1373	Open in IMG/M
3300026532\|Ga0209160_1001083	All Organisms → cellular organisms → Archaea	22742	Open in IMG/M
3300026532\|Ga0209160_1203225	All Organisms → cellular organisms → Archaea	741	Open in IMG/M
3300026536\|Ga0209058_1154856	All Organisms → cellular organisms → Archaea	1067	Open in IMG/M
3300026548\|Ga0209161_10298684	All Organisms → cellular organisms → Archaea	784	Open in IMG/M
3300026550\|Ga0209474_10191131	All Organisms → cellular organisms → Archaea	1310	Open in IMG/M
3300027643\|Ga0209076_1084818	All Organisms → cellular organisms → Archaea	901	Open in IMG/M
3300032180\|Ga0307471_102376718	All Organisms → cellular organisms → Archaea	669	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	98.13%
Loam	Environmental → Terrestrial → Soil → Loam	1.87%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	47.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.87%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	33.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	29.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	17.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	12.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100463971	3300002558	Grasslands Soil	GITALIPTTTFTIAALVVFSLGLIVSAIVLKFGTQLATSVGDAYKSYRSYTPLLAWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTLKVVMNTVNALEGKNTSRHLQTN
JGI25383J37093_100635231	3300002560	Grasslands Soil	DAYKSYRSYTPLLAWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLTN*
JGI25383J37093_101410791	3300002560	Grasslands Soil	VLVVIQATVLGFPGITALIPTTTFTIAAMVIFTLGLIVSAIVLKFGTQLATSLGDSYKNYRSYTPLLAWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVSALEGKNTSKHLLTN*
JGI25383J37093_102074421	3300002560	Grasslands Soil	ALIPTTTFTIAALVIFTLGLVVSAIVLKFGTQLATSLGDAYKSYRSYTPLIAWLFQMIALVILYNVSKPITASYFTTIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLTN*
JGI25382J37095_101310502	3300002562	Grasslands Soil	TLGLVVSAIVLKFGTQLATSLGDAYKSYRSYTPLIAWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLTN*
JGI25382J43887_100054738	3300002908	Grasslands Soil	ATSLGEAYKSYRNYTPLLAWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVSALEGKNTSKHLLTN*
JGI25382J43887_100487641	3300002908	Grasslands Soil	VVSAIVLKFGTQLATSLGDAYKSYRSYTPLIAWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
JGI25382J43887_100928091	3300002908	Grasslands Soil	VVSAIVLKFGTQLATSLGDAYKSYRSYTPLIAWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLTN*
JGI25382J43887_102781091	3300002908	Grasslands Soil	TALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLANSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
JGI25382J43887_104296261	3300002908	Grasslands Soil	TALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLATSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTLKVVMNTVNALEGKNTSRHLQTN*
JGI25386J43895_100304083	3300002912	Grasslands Soil	LGLVVSAIVLKFGTQLSTSLGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVSALEGKNTSKHLQTN*
JGI25386J43895_100595671	3300002912	Grasslands Soil	PTTTFTIAALVIFTLGLVVSAIVLKFGTQLATSLGDAYKSYRSYTPLIAWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLTN*
Ga0066680_106054021	3300005174	Soil	GFPGITALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLATSLGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0066680_107387381	3300005174	Soil	TFTIAALVVFTLGLVVSAIVLKFGTQLATSLGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0066679_106524801	3300005176	Soil	LVVSAIVLKFGTQLATSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITVSYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0066685_104354511	3300005180	Soil	ATVLGFPGITALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLANSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0066685_110288931	3300005180	Soil	ATVLGFPGITALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLATSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0066675_100414814	3300005187	Soil	FPGITALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLATSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0066675_114185002	3300005187	Soil	FTLGLVVSAIVLKFGTQLANSLGDAYKSYRNYTPLLTWIFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0070707_1021495431	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	AYKSFRNFTPLLAWLFQMIALVILYDVSKPITATYFATIPWAYPLIFLLIALGPTIKVVINTVNSLEGKNTNKCLLSN*
Ga0066692_107762011	3300005555	Soil	LGFPGITALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLATSLGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0066704_109175031	3300005557	Soil	VLKFGTQLATSLGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0066698_103166652	3300005558	Soil	VLVVIQATVLGFPGITALIPTTTFTIAAMIVFTLGLIVSAIVLKFGTQLATSLGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLSN*
Ga0066702_107885021	3300005575	Soil	GTQLATSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITVSYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0066654_102390691	3300005587	Soil	PGITALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLATSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0066706_110910561	3300005598	Soil	SLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITVSYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0066665_100700194	3300006796	Soil	ITSLIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLSTSLGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFVTIPWAYPLIFLLIAIGPTIKVVMNTVSALEGKNTSKHLQTN*
Ga0066659_108012272	3300006797	Soil	YKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVSALEGKNTSKHLQTN*
Ga0099791_100749553	3300007255	Vadose Zone Soil	SVGNAYKSYHSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLSN*
Ga0099793_106711791	3300007258	Vadose Zone Soil	FGTQLATSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITASYFVTIPWAYPLIFLLIAIGPTIKVVLNTVNSLEGKNTSKHVLSN*
Ga0099794_102847641	3300007265	Vadose Zone Soil	PTTTFTIAALVVFTLGLIVSAIVLKFGTQLATSVGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLSN*
Ga0134082_100579661	3300010303	Grasslands Soil	QATVLGFPGITALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLANSLGDAYKSYRNYTPLLTWIFHMIALVILYNVSKPITASYFATIPWTYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0134088_101024253	3300010304	Grasslands Soil	VVIQATVLGFPGITALIPTTTFTIAALVIFTLGLVVSAIVLKFGTQLATSLGDAYKSYRSYTPLIAWLFQMIALVILYNVSKPITASYFATIQWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLTN*
Ga0134064_105125722	3300010325	Grasslands Soil	SLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0134065_100241131	3300010326	Grasslands Soil	LGLVVSAIVLKFGTQLATSLGDAYKSYRNYTPLLTRLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0134080_106756311	3300010333	Grasslands Soil	VIQATVLGFPGITALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLANSLGDAYKSYRNYTPLLTWIFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0134063_107036441	3300010335	Grasslands Soil	TFTIAALVVFTLGLVVSAIVLKFGTQLANSLGDAYKSYRNYTPLLTWIFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0134071_105345501	3300010336	Grasslands Soil	TIAALVVFTLGLVVSAIVLKFGTQLANSLGDAYKSYRNYTPLLTWIFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0137391_106186941	3300011270	Vadose Zone Soil	PTTTFTIAALVVFTLGLIVSAIVLKFGTQLATSVGDAYKSYRSITPLLAWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLSN*
Ga0137391_115736302	3300011270	Vadose Zone Soil	VLKFGTQLATSVGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLSN*
Ga0137393_108806062	3300011271	Vadose Zone Soil	VVIQATVLGFPGITALIPTTTFTIAALVVFTLGLIVSAIVLKFGTQLATSVGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPNIKVVMNTVNALEGKNTSKHLLSN*
Ga0137393_114699751	3300011271	Vadose Zone Soil	GLIVSAIVLKFGTQLATSVGDAYKSYRSITPLLAWLFQMIALVILYDVSKPLTVSYFATIPWAYPLIFLLIAIGPTIKVVMNTVNSLEGKNTSRHLLTN*
Ga0137393_116271731	3300011271	Vadose Zone Soil	GLIVSAIVLKFGTQLATSVGDAYKSYRSITPLLAWLFQMIALVILYDVSKPLTASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNSLEGKNTSKHLLTN*
Ga0137389_106226291	3300012096	Vadose Zone Soil	TTTFTIAALVVFTLGLIVSAIVLKFGTQLATSVGEAYKSYRSFTPLLAWLFQMIALVILYEVSNPITASYFAPIPWAYPLIFLLIALGPTIKVVMNTVNALEGKNTSKHLQSN*
Ga0137364_100945281	3300012198	Vadose Zone Soil	LGLVVSAIVLKFGTQLANSLGDAYKSYRNYTPLLTWIFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0137383_112803742	3300012199	Vadose Zone Soil	SLGDAYKSYRNYTPLLTWIFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0137363_104458243	3300012202	Vadose Zone Soil	FTLGLIVSAIVLKFGTQLATSLGDSYKNYRSYTPLLAWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVSALEGKNTSKHLLTN*
Ga0137399_100245212	3300012203	Vadose Zone Soil	MDDFRPIMPPLVRLLAGIIVLFVIQATVLGFPGITALIPTTTFTIAALVVFTLGLIVSAIVLKFGTQLATSIGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0137399_105305933	3300012203	Vadose Zone Soil	VLVVIQATVLGFPGITALIPTTTFTIAALVVFTLGLIVSAIVLKFGTQLATSIGDAYKSYRNYTPLLTWIFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLSN*
Ga0137380_105334043	3300012206	Vadose Zone Soil	VVSAIVLKFGTQLATSLGDAYKSYRSYTPLIAWLFQIIALVILYNVSKPITASYFATIPWAYSLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLTN*
Ga0137380_111169031	3300012206	Vadose Zone Soil	KSYRNYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0137380_113402312	3300012206	Vadose Zone Soil	IAALVVFTLGLVVSAIVLKFGTQLANSLGDAYKSYRSYTPLLTWIFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0137381_101200584	3300012207	Vadose Zone Soil	GFPGITALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLATSLGDAYKSYRNYAPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLTN*
Ga0137376_103611363	3300012208	Vadose Zone Soil	YTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMTTLNALEGKNTSRHLQTN*
Ga0137379_103116061	3300012209	Vadose Zone Soil	VLGFPGITALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLATSLGDAYKSYRNYAPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLTN*
Ga0137377_118844341	3300012211	Vadose Zone Soil	TIAALVVFTLGLVVSAIVLKFGTQLANSLGDAYKSYRSYTPLLTWIFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0137387_100270541	3300012349	Vadose Zone Soil	IAALVIFTLGLVVSAIVLKFGTQLATSLGDAYKSYRSYTPLIAWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLTN*
Ga0137387_110267471	3300012349	Vadose Zone Soil	KSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLSN*
Ga0137386_112411191	3300012351	Vadose Zone Soil	TTFTIAALVVFTLGLVVSAIVLKFGTQLANSLGDAYKSYRSYTPLLTWIFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0137367_108186021	3300012353	Vadose Zone Soil	QLATSLGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0137366_104542472	3300012354	Vadose Zone Soil	GTQLANSLGDAYKSYRNYTPLLTWIFQMIALVVLYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0137371_101021831	3300012356	Vadose Zone Soil	LGFPGITALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLATSLGDAYKSYRNYAPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLTN*
Ga0137371_109480742	3300012356	Vadose Zone Soil	KSYRSYTRLIAWLFQMIALVILYNVSRRITASYFATIQWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLTN*
Ga0137384_108699912	3300012357	Vadose Zone Soil	PTTTFTIAALVVFTLGLVVSAIVLKFGTQLANSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0137360_106673402	3300012361	Vadose Zone Soil	IAALVVFTLGLVVSAIVLKFGTQLANSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTPRHLQTN*
Ga0137390_105454202	3300012363	Vadose Zone Soil	LKFGTQLATSVGDAYKSYRSITPLLAWLFQMIALVILYDVSKPLTASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNSLEGKNTSKHLLTN*
Ga0134032_11220721	3300012376	Grasslands Soil	QATVLGFPGITALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLATSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN*
Ga0134056_12038281	3300012397	Grasslands Soil	LVVIQATVLGFPGITALIPTTTFTIAALVIFTLGLVVSAIVLKFGTQLAASLGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLSN*
Ga0137395_108603132	3300012917	Vadose Zone Soil	VLVVIQATVLGFPGITALIPTTTFTIAALVVFTLGLIVSAIVLKFGTQLATSVGDAYKSYRSITPLLAWLFQMIALVILYDVSKPLTVSYFATIPWAYPLIFLLIAIGPTIKVVMNTVNSLEGKNTSRHLLTN*
Ga0137394_113341482	3300012922	Vadose Zone Soil	IQATVLGFPGITALIPTTTFTIAALVVFTLGLIVSAIVLKFGTQLATSIGDAYKSYRSYTPLLTWIFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLSN*
Ga0137410_119796521	3300012944	Vadose Zone Soil	FTLGLIVSAIVLKFGTQLATSIGDAYKSYRSYTPLLTWIFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLSN*
Ga0134075_101202401	3300014154	Grasslands Soil	FGTQLATSLGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMSTVNALEGKNTSKHLLSN*
Ga0134089_104764801	3300015358	Grasslands Soil	AMIVFTLGLIVSAIVLKFGTQLATSLGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLSN*
Ga0134069_10776581	3300017654	Grasslands Soil	LGLVVSAIVLKFGTQLANSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN
Ga0134083_102909162	3300017659	Grasslands Soil	PGITALIPTTTFTIAALVIFTLGLVVSAIVLKFGTQLATSLGDAYKSYRSYTPIIAWLFQMIALVILYNVSKPITASYFASIPWAYPLIFLMIAIGPTIKVVMNTVNALEGKNTSKHLLT
Ga0066655_100957213	3300018431	Grasslands Soil	VIQATVLGFPGITALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLANSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN
Ga0066662_102236751	3300018468	Grasslands Soil	VLGFPGITALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLATSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN
Ga0215015_104853241	3300021046	Soil	LATSLGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLSN
Ga0210404_109035961	3300021088	Soil	ITALIPTTTFTIAALVVFTLGLIVSAIVLKFGTQLATSVGDAYKSYRSFTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLSN
Ga0210409_101216871	3300021559	Soil	GTQLASSVGDAYKSFRNYTPLLTWLFQMIALVILYNVSKPITATYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLSN
Ga0137417_14623064	3300024330	Vadose Zone Soil	LETQLATSVGDAYKSYRSYTPLLTWLFQMIALVILYNVRSQSQQAISQQSHGPNPLIFLLIAIDPPQVVMNTVNALEGKNTSKHLLSNSS
Ga0207646_105403832	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	TQLATSVGDAYRSYRNITPLLAWLFQMIALVILYDVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLTN
Ga0209235_10791653	3300026296	Grasslands Soil	VLVVIQATVLGFPGITALIPTTTFTIAALVIFTLGLVVSAIVLKFGTQLATSLGDAYKSYRSYTPLIAWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLTN
Ga0209235_12279892	3300026296	Grasslands Soil	FPGITALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLATSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN
Ga0209237_10541481	3300026297	Grasslands Soil	FTIAALVIFTLGLVVSAIVLKFGTQLATSLGDAYKSYRSYTPIIAWLFQMIALVILYNVSKPITASYFASIPWAYPLIFLMIAIGPTIKVVMNTVNALEGKNTSKHLLTN
Ga0209055_12864471	3300026309	Soil	GTQLATSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTLKVVMNTVNALEGKNTSRHLQTN
Ga0209761_10578571	3300026313	Grasslands Soil	LATSLGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN
Ga0209761_10768171	3300026313	Grasslands Soil	PTTTFTIAALVIFTLGLVVSAIVLKFGTQLATSLGDAYKSYRSYTPLIAWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLTN
Ga0209268_10084036	3300026314	Soil	FSCITALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLANSLGDAYKSYRNYTPLLTWIFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN
Ga0209154_10372303	3300026317	Soil	IQATVLGFPGITALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLATSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITVSYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN
Ga0209471_11005993	3300026318	Soil	LGLVVSAIVLKFGTQLATSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN
Ga0209471_11506332	3300026318	Soil	LGLVVSAIVLKFGTQLATSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITVSYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN
Ga0209802_10067141	3300026328	Soil	FTLGLVVSAIVLKFGTQLATSLGDAYKSYRNYTPLLTWIFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN
Ga0209802_12920302	3300026328	Soil	LVVFTLGLVVSAIVLKFGTQLATSLGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN
Ga0209158_11665111	3300026333	Soil	GTQLANSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN
Ga0257181_11044031	3300026499	Soil	ALIPTTTFTIAALVVFTLGLIVSAIVLKFGTQLATSVGDAYKSYRSITPLLAWLFQMIALVILYDVSKPLTASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNSLEGKNTSRHLLTN
Ga0209059_11324752	3300026527	Soil	ALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLATSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN
Ga0209378_10897121	3300026528	Soil	GTQLTNSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITVSYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN
Ga0209807_13216891	3300026530	Soil	SLGLIVSAIVLKFGTQLATSVGDAYKSYRSYTPLLAWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTLKVVMNTVNALEGKNTSRHLQTN
Ga0209160_100108326	3300026532	Soil	IQATVLGFPGITALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLATSLGDAYKSYRNYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN
Ga0209160_12032252	3300026532	Soil	VLGFPGITALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLATSLGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN
Ga0209058_11548562	3300026536	Soil	VLVVIQATVLGFPGITALIPTTTFTIAAMIVFTLGLIVSAIVLKFGTQLATSLGDAYKSYRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLSN
Ga0209376_11784182	3300026540	Soil	LVIFTLGLVVSAIVLKFGTQLATSLSDAYKSYRSYTPLIAWLFQMIALVILYNVSKPITASYFATIQWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLTN
Ga0209161_102986841	3300026548	Soil	PTTTFTIAALVVFTLGLVVSAIVLKFGTQLATSLGDAYKSIRSYTPLLTWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN
Ga0209474_101911311	3300026550	Soil	VIQATVLGFPGITALIPTTTFTIAALVVFTLGLVVSAIVLKFGTQLANSLGDAYKSYRNYTPLLTWIFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSRHLQTN
Ga0209076_10848181	3300027643	Vadose Zone Soil	TTFTIAALVVFTLGLIVSAIVLKFGTQLATSIGDAYKSYRSYTPLLTWIFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTSKHLLSN
Ga0307471_1023767181	3300032180	Hardwood Forest Soil	DAYKSYRSITPVLVWLFQMIALVILYNVSKPITASYFATIPWAYPLIFLLIAIGPTIKVVMNTVNALEGKNTNKHLLNN

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091718

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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