NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F091793

Metagenome Family F091793

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F091793
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 68 residues
Representative Sequence MKTTKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTMENNSSVFLNASVDNN
Number of Associated Samples 80
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 1.87 %
% of genes near scaffold ends (potentially truncated) 30.84 %
% of genes from short scaffolds (< 2000 bps) 74.77 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (89.720 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Strait → Unclassified → Seawater
(14.953 % of family members)
Environment Ontology (ENVO) Unclassified
(73.832 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(87.850 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 80.28%    β-sheet: 0.00%    Coil/Unstructured: 19.72%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF07486Hydrolase_2 14.02
PF06067DUF932 2.80
PF02732ERCC4 0.93
PF136402OG-FeII_Oxy_3 0.93
PF13412HTH_24 0.93
PF01844HNH 0.93
PF04542Sigma70_r2 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG3773Cell wall hydrolase CwlJ, involved in spore germinationCell cycle control, cell division, chromosome partitioning [D] 14.02
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.93
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.93
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.93
COG1948ERCC4-type crossover junction endonucleaseReplication, recombination and repair [L] 0.93
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A89.72 %
All OrganismsrootAll Organisms10.28 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10218935Not Available623Open in IMG/M
3300000115|DelMOSum2011_c10057827Not Available1480Open in IMG/M
3300000115|DelMOSum2011_c10128103Not Available783Open in IMG/M
3300000115|DelMOSum2011_c10195796Not Available566Open in IMG/M
3300000115|DelMOSum2011_c10229496Not Available503Open in IMG/M
3300000117|DelMOWin2010_c10160093Not Available732Open in IMG/M
3300000117|DelMOWin2010_c10194529Not Available629Open in IMG/M
3300000117|DelMOWin2010_c10194530Not Available629Open in IMG/M
3300000117|DelMOWin2010_c10255145Not Available511Open in IMG/M
3300002231|KVRMV2_100104200Not Available698Open in IMG/M
3300003474|NAP4_1065421Not Available730Open in IMG/M
3300003620|JGI26273J51734_10015654Not Available3024Open in IMG/M
3300004097|Ga0055584_100349916Not Available1523Open in IMG/M
3300005433|Ga0066830_10000083Not Available12863Open in IMG/M
3300006027|Ga0075462_10206703Not Available589Open in IMG/M
3300006789|Ga0098054_1014128Not Available3248Open in IMG/M
3300006803|Ga0075467_10018695Not Available4491Open in IMG/M
3300006803|Ga0075467_10179483Not Available1193Open in IMG/M
3300006916|Ga0070750_10114338Not Available1242Open in IMG/M
3300007540|Ga0099847_1119834Not Available793Open in IMG/M
3300007540|Ga0099847_1121597Not Available786Open in IMG/M
3300007623|Ga0102948_1290560Not Available500Open in IMG/M
3300009071|Ga0115566_10819992Not Available511Open in IMG/M
3300009074|Ga0115549_1085076All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Imitervirales → Mimiviridae → Mimivirus → unclassified Mimivirus → Mimivirus LCMiAC011073Open in IMG/M
3300009076|Ga0115550_1024540Not Available2793Open in IMG/M
3300009076|Ga0115550_1140990Not Available850Open in IMG/M
3300009077|Ga0115552_1001565Not Available13214Open in IMG/M
3300009124|Ga0118687_10010400Not Available3081Open in IMG/M
3300009435|Ga0115546_1199404Not Available693Open in IMG/M
3300009440|Ga0115561_1250293Not Available662Open in IMG/M
3300009481|Ga0114932_10539229Not Available685Open in IMG/M
3300009496|Ga0115570_10273595Not Available738Open in IMG/M
3300009498|Ga0115568_10270298Not Available759Open in IMG/M
3300009507|Ga0115572_10032116Not Available3491Open in IMG/M
3300009508|Ga0115567_10194134Not Available1318Open in IMG/M
3300009703|Ga0114933_10288514Not Available1091Open in IMG/M
3300011013|Ga0114934_10051532Not Available2119Open in IMG/M
3300011013|Ga0114934_10334269Not Available680Open in IMG/M
3300017717|Ga0181404_1073314Not Available849Open in IMG/M
3300017729|Ga0181396_1014595Not Available1567Open in IMG/M
3300017729|Ga0181396_1056893Not Available780Open in IMG/M
3300017744|Ga0181397_1095602Not Available784Open in IMG/M
3300017746|Ga0181389_1149820Not Available621Open in IMG/M
3300017750|Ga0181405_1032110Not Available1424Open in IMG/M
3300017750|Ga0181405_1045979Not Available1158Open in IMG/M
3300017753|Ga0181407_1063680All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300017753|Ga0181407_1088792Not Available784Open in IMG/M
3300017757|Ga0181420_1028610Not Available1836Open in IMG/M
3300017760|Ga0181408_1130528Not Available649Open in IMG/M
3300017764|Ga0181385_1025866Not Available1869Open in IMG/M
3300017768|Ga0187220_1151680Not Available700Open in IMG/M
3300017773|Ga0181386_1232280Not Available548Open in IMG/M
3300017786|Ga0181424_10415175Not Available546Open in IMG/M
3300017824|Ga0181552_10001170Not Available19929Open in IMG/M
3300018410|Ga0181561_10019773All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae4963Open in IMG/M
3300020165|Ga0206125_10011949All Organisms → cellular organisms → Bacteria5979Open in IMG/M
3300020165|Ga0206125_10076322All Organisms → Viruses → Predicted Viral1495Open in IMG/M
3300020165|Ga0206125_10128410Not Available1040Open in IMG/M
3300020166|Ga0206128_1254615Not Available644Open in IMG/M
3300020175|Ga0206124_10008595All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon6097Open in IMG/M
3300020175|Ga0206124_10096321Not Available1231Open in IMG/M
3300020175|Ga0206124_10200234Not Available788Open in IMG/M
3300020336|Ga0211510_1003817Not Available4306Open in IMG/M
3300020438|Ga0211576_10007572Not Available7096Open in IMG/M
3300020438|Ga0211576_10154369Not Available1241Open in IMG/M
3300020438|Ga0211576_10542880Not Available584Open in IMG/M
3300020595|Ga0206126_10022570Not Available4099Open in IMG/M
3300020595|Ga0206126_10521234Not Available509Open in IMG/M
3300020601|Ga0181557_1036997Not Available2976Open in IMG/M
3300021365|Ga0206123_10059575All Organisms → Viruses → Predicted Viral1940Open in IMG/M
3300021365|Ga0206123_10283048Not Available710Open in IMG/M
3300021371|Ga0213863_10393125Not Available562Open in IMG/M
3300021957|Ga0222717_10012754Not Available5790Open in IMG/M
3300021957|Ga0222717_10013587Not Available5590Open in IMG/M
3300021957|Ga0222717_10047952All Organisms → Viruses → Predicted Viral2777Open in IMG/M
3300021957|Ga0222717_10283919Not Available950Open in IMG/M
3300021957|Ga0222717_10315022Not Available888Open in IMG/M
3300021958|Ga0222718_10101029Not Available1700Open in IMG/M
3300021959|Ga0222716_10003385Not Available12742Open in IMG/M
3300022061|Ga0212023_1046754Not Available602Open in IMG/M
3300022065|Ga0212024_1068478Not Available629Open in IMG/M
3300022072|Ga0196889_1021736Not Available1332Open in IMG/M
3300022178|Ga0196887_1102536Not Available638Open in IMG/M
(restricted) 3300023112|Ga0233411_10207614Not Available647Open in IMG/M
(restricted) 3300023210|Ga0233412_10016877All Organisms → cellular organisms → Bacteria2894Open in IMG/M
3300024267|Ga0228623_1013291Not Available1832Open in IMG/M
3300024320|Ga0233398_1142304Not Available534Open in IMG/M
3300024326|Ga0228652_1025217All Organisms → Viruses → Predicted Viral1695Open in IMG/M
3300024344|Ga0209992_10426256Not Available520Open in IMG/M
(restricted) 3300024519|Ga0255046_10079266Not Available1358Open in IMG/M
3300025151|Ga0209645_1072482Not Available1159Open in IMG/M
3300025543|Ga0208303_1051794Not Available994Open in IMG/M
3300025667|Ga0209043_1023088Not Available2179Open in IMG/M
3300025696|Ga0209532_1055285Not Available1568Open in IMG/M
3300025806|Ga0208545_1117373Not Available674Open in IMG/M
3300025809|Ga0209199_1275953Not Available535Open in IMG/M
3300025870|Ga0209666_1065842Not Available1881Open in IMG/M
3300025881|Ga0209309_10014572Not Available5457Open in IMG/M
3300025881|Ga0209309_10318130Not Available695Open in IMG/M
3300026136|Ga0208763_1001299Not Available4531Open in IMG/M
3300026479|Ga0228622_1106072Not Available559Open in IMG/M
(restricted) 3300028045|Ga0233414_10185351Not Available930Open in IMG/M
3300028136|Ga0228608_1110135Not Available763Open in IMG/M
3300028600|Ga0265303_10787819Not Available780Open in IMG/M
3300029448|Ga0183755_1012781All Organisms → Viruses → Predicted Viral3170Open in IMG/M
3300029448|Ga0183755_1052519Not Available1014Open in IMG/M
3300032277|Ga0316202_10024785Not Available2917Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater14.95%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine13.08%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous11.21%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater10.28%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine8.41%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water6.54%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater5.61%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine5.61%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface4.67%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine3.74%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.80%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine2.80%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh2.80%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.87%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat0.93%
EstuarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine0.93%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.93%
SedimentEnvironmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment0.93%
WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water0.93%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300003474Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 4EnvironmentalOpen in IMG/M
3300003620Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNAEnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300005433Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF45BEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007623Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_H2O_MGEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009076Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511EnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009124Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsfEnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300009440Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009496Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524EnvironmentalOpen in IMG/M
3300009498Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300009703Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaGEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300017717Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25EnvironmentalOpen in IMG/M
3300017729Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017750Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018410Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020166Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1EnvironmentalOpen in IMG/M
3300020175Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2EnvironmentalOpen in IMG/M
3300020336Marine microbial communities from Tara Oceans - TARA_E500000081 (ERX289008-ERR315860)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020595Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1EnvironmentalOpen in IMG/M
3300020601Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011506CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300021365Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1EnvironmentalOpen in IMG/M
3300021371Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300022061Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2)EnvironmentalOpen in IMG/M
3300022065Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300023112 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_2_MGEnvironmentalOpen in IMG/M
3300023210 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MGEnvironmentalOpen in IMG/M
3300024267Seawater microbial communities from Monterey Bay, California, United States - 28DEnvironmentalOpen in IMG/M
3300024320Seawater microbial communities from Monterey Bay, California, United States - 38DEnvironmentalOpen in IMG/M
3300024326Seawater microbial communities from Monterey Bay, California, United States - 64DEnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024519 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_27EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025667Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025696Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)EnvironmentalOpen in IMG/M
3300025806Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025809Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)EnvironmentalOpen in IMG/M
3300025870Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025881Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes)EnvironmentalOpen in IMG/M
3300026136Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF45B (SPAdes)EnvironmentalOpen in IMG/M
3300026479Seawater microbial communities from Monterey Bay, California, United States - 26DEnvironmentalOpen in IMG/M
3300028045 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_10_MGEnvironmentalOpen in IMG/M
3300028136Seawater microbial communities from Monterey Bay, California, United States - 9DEnvironmentalOpen in IMG/M
3300028600Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160317 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300029448Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082EnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1021893513300000101MarineMKTTKDFNMSLYYKVITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTM
DelMOSum2011_1005782733300000115MarineMKTTKDFNMSLYYKVITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTMESNSSVFLNASVDNI*
DelMOSum2011_1012810323300000115MarineMKATKDFNMSLYFGIISSASRHKILIEDELKKALSEERKQYLQAQILEQDNIIKTIEDNSSVFLNASIDNAQG*
DelMOSum2011_1019579623300000115MarineMSLYFGIISSAQNYKILLEDEQKKALSEERKGYLKEKILEQDHIIEVMENNSSVFLNASVDNN*
DelMOSum2011_1022949613300000115MarineMKTTKDFNMSLYFGIISSAQNYKILLEDEQKKALSEERKGYLKEKILEQDHIIEVMENNSSVFLNASVDNN*
DelMOWin2010_1016009333300000117MarineMSLYFGIINSASRHKILIEDELKNVLSEERKQYLQAQILEQDHIIQTMESNSSVFLNASIAQA*
DelMOWin2010_1019452923300000117MarineMKTTKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLNEKISEQDHIIEVMENNSSVFLNASVDNN*
DelMOWin2010_1019453023300000117MarineMKTTKDFNMSLYYKVITSASSHKRLLEDEQKKALSEERKDYLQEKISEQDHIIQTMENNSSVFLNASVDNN*
DelMOWin2010_1025514523300000117MarineMKTTKDFNMSLYYGIITSASSHKRLLEDEQKKALSNERKDYLKEKISEQDHIIQTLENNSSVFLNASIDNI*
KVRMV2_10010420023300002231Marine SedimentMKTTKDFNMSLYYTIITSASSHKRLLEDEQKKALSNERKDYLKEKISEQDHIIQTMESNSSVFLNASIAQA*
NAP4_106542113300003474EstuarineMKTTKDFNMSLYYTIITSASSHKRLLEDEQKKALSNERKDYLQAKISEQDHIIKTMEDNSSVFLGASIDNAQG*
JGI26273J51734_1001565423300003620MarineMKATKDFNMSLYFGIISSASRHKMLIEDELKKALSEERKQYLQAQILEQDYIIKTIEDNTSIFLNASIDNTQE*
Ga0055584_10034991643300004097Pelagic MarineMKATKDFNMSLYYTIITSASSHKRLLEDEQKKALSNERKDYLKEKISEQDHIIQTIESNSSVFLNASIAQA*
Ga0066830_10000083113300005433MarineMKTTKDFNMSLYFGIISSASRHKILIEDELKKALSEERKQYLQAQILEQDYIIKRIENNASIFLDASIDNTQE*
Ga0075462_1020670323300006027AqueousMSLYYGIITSASSHKRLLEDEQKKALSNERKDYLKEKISEQDHIIQTLENNSSVFLNASIDNI*
Ga0098054_101412833300006789MarineMKTTKDFNISLYYKIITSASSHKILLEDEQKKAMSEERKSYLQEKISEQDHIIEAMENNSSVFLNASVDNI*
Ga0075467_1001869583300006803AqueousMSYPLCYN*TMKATKDFNMSLYYGIITSASSHKRLLEDEQKKALSNERKDYLKEKISEQDHIIQTLENNSSVFLNASIDNI*
Ga0075467_1017948323300006803AqueousMKATKDFNMSLYYTIITSASSHKRLLEDEQKKALSNERKDYLKEKISEQDHIIQTMESNSSVFLNASIAQA*
Ga0070750_1011433833300006916AqueousMKTTKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLQEKISEQDHIIQTMENNSSVFLNASVDNN*
Ga0099847_111983423300007540AqueousMKTTKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLQEKISEQDHIIQTMENN
Ga0099847_112159723300007540AqueousMKTTKDFNMSLYYGIITSASSHKRLLEDEQKKALSEERKDYLQEKISEQDHIIQTMENN
Ga0102948_129056023300007623WaterMKTTKDFNMSLYFGIINSASRHKILIEDELKNVLSEERKQYLQAQILEQDHIIQTMESNSSVFLNASIAQA*
Ga0115566_1081999223300009071Pelagic MarineMKTTKDFNMSLYYKVITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTMENNSSVFL
Ga0115549_108507633300009074Pelagic MarineMKTTKDFNMSLYYKVITSASSHKRLLEDEQKKALSEERKDYLQEKISEQDHIIQTMENNSSVFLNASVDNI*
Ga0115550_102454033300009076Pelagic MarineMKTTKDFNMSLYYKVITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTMENNSSVFLNASVDNN*
Ga0115550_114099023300009076Pelagic MarineMKATKDFNMSLYYTIITSASSHKRLLEDEQKKALSNERKDYLKEKISEQDHIIQTM
Ga0115552_100156553300009077Pelagic MarineMKTTKDFNMSLYYKVITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTMENNSSVFLNASVDNI*
Ga0118687_1001040033300009124SedimentMKTTKDFNMSLYFGIISSAQNYKILLEDEQKKALSEERKNYLKAKVAEQDHIIEAMENNSSVFLNASVDNN*
Ga0115546_119940413300009435Pelagic MarineMKTTKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTMENNSSVFLN
Ga0115561_125029323300009440Pelagic MarineMKTTKDFYMSLYYKVITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTMENNSSVFLNASVDNI*
Ga0114932_1053922923300009481Deep SubsurfaceMKTTKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTMENNSSVFLNASVDNN*
Ga0115570_1027359513300009496Pelagic MarineMKTTKDFNMSLYYKVITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTMENNSSVFLNASVD
Ga0115568_1027029813300009498Pelagic MarineMKATKDFNMSLYYTIITSASSHKRLLEDEQKKALSNERKDYLKEKISEQDHIIQTIESNSSVFLNASI
Ga0115572_1003211613300009507Pelagic MarineKDFNMSLYYKVITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTMENNSSVFLNASVDNI*
Ga0115567_1019413433300009508Pelagic MarineMKTTKDFNMSLYYKVITSASSHKRLLEDEQKKALSEERKDYLQEKISEQDHIIQTMENNSSVFLSASVDNI*
Ga0114933_1028851423300009703Deep SubsurfaceMKTTKDFNMSLYYGIITSASSHKRLLEDEQKKALSNERRDYLKEKISEQDHIIQTMEN
Ga0114934_1005153213300011013Deep SubsurfaceNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTMENNSSVFLNASVDNN*
Ga0114934_1033426913300011013Deep SubsurfaceMKTTKDFNMSLYYGIITSASSHKRLLEDEQKKALSNERRDYLKEKISEQDHIIQTMENNSSVFLNASIDNI*
Ga0181404_107331433300017717SeawaterMKTTKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLQEKISEQDYIIETMENNSSVFLNASVDNN
Ga0181396_101459543300017729SeawaterMSLYYGIITSASSHKRLLEDEQKKALSNERKDYLREKISEQDHIIQTLENNSSVFLNASIDNI
Ga0181396_105689313300017729SeawaterMKATKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTMESNSSVFLNASVDNI
Ga0181397_109560233300017744SeawaterMKTTKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIETMENISSVFLNA
Ga0181389_114982013300017746SeawaterMKTTKDFNISLYYNIITSASSHKILLEDEQKKALSEERKDYLKEKISEQDHIIETMENNSSVFLNASVDNN
Ga0181405_103211043300017750SeawaterMKTTKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLQEKISEQDYIIETMENNSSVFLNASVD
Ga0181405_104597913300017750SeawaterMKTTKDLNMSLYYKIITSASSHKRLLEDEQKKALSEERKDYLKEKILEQDHIIEAMENNSSVFLNASVDNN
Ga0181407_106368033300017753SeawaterMKTTKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLQEKISEQDYIIETMENNSSVFLNASVDN
Ga0181407_108879213300017753SeawaterMSLYYKIITSASSHKRLLEDEQKKALSEERKSYLQAKISEQDYIIEAVENNSSVFLNASVDNN
Ga0181420_102861023300017757SeawaterMKTTKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIETMENNSSVFLNVSVDNN
Ga0181408_113052813300017760SeawaterMKATKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKSYLQAKISEQDYIIEAVENNSSVFLNASVDNN
Ga0181385_102586613300017764SeawaterMKATKDFNMSLYFGIISSVSKHKILIEDELKKAISEERKQYLQAQISEQDNIIKTMEDNSSVFLDASIAQA
Ga0187220_115168023300017768SeawaterMKTTKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLQEKISEQDHINQTMESNSSVFLNASVDNI
Ga0181386_123228023300017773SeawaterMKATKDFNMSLYFGIISSVSKHKILIEDELKKAISEERKQYLQAQISEQDNIIKTMEDNSSVFLNASIDNTQK
Ga0181424_1041517523300017786SeawaterMKTTKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTMESNSSVFLNASVDNN
Ga0181552_10001170253300017824Salt MarshMKTTKDFNMSLYFGIISSAQNYKILLEDEQKKALSEERKNYLKAKVAEQDHIIEA
Ga0181561_1001977363300018410Salt MarshMKTTKDFNMSLYFGIISSAQNYKILLEDEQKKALSEERKNYLKAKVAEQDHIIEAMENNSSVFLNASVDNN
Ga0206125_1001194963300020165SeawaterMKTTKDFNMSLYYKVITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTMENNSSVFLNASVDNN
Ga0206125_1007632233300020165SeawaterMKATKDFNMSLYYTIITSASSHKRLLEDEQKKALSNERKDYLKEKISEQDHIIQTMESNSSVFLNASIAQA
Ga0206125_1012841023300020165SeawaterMKATKDFNMSLYFGIISSASRHKILIEDELKKALSEERKQYLQAQILEQDNIIKTIEDNSSVFLNASIDNAQG
Ga0206128_125461513300020166SeawaterYYTIITSASSHKRLLEDEQKKALSNERKDYLKEKISEQDHIIQTIESNSSVFLNASIAQA
Ga0206124_10008595103300020175SeawaterLKIDYIITMKATKDFNMSLYFGIISSASRHKILIEDELKKALSEERKQYLQAQILEQDNIIKTIEDNSSVFLNASIDNAQG
Ga0206124_1009632143300020175SeawaterKDFNMSLYYTIITSASSHKRLLEDEQKKALSNERKDYLKEKISEQDHIIQTIESNSSVFLNASIAQA
Ga0206124_1020023413300020175SeawaterMKTTKDFNMSLYYKVITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTMENNSSVFLNASVDNI
Ga0211510_100381783300020336MarineMSLYYTIITSASSHKRLLEDEQKKALSNERKDYLQAKISEQDHIIKTMEDNSSVFLGASIDNAQG
Ga0211576_1000757213300020438MarineMKTTKDLNMSLYYKIITSASSHKRLLEDEQKKALSEERKSYLQAKISEQDYIIEAVENNSSVFLNASVDNN
Ga0211576_1015436923300020438MarineMKTTKDFNMSLYYGIITSASSHKRLLEDEQKKALSNERKDYLREKISEQDHIIQTLENNSSVFLNASIDNI
Ga0211576_1054288013300020438MarineMKTTKDFNISLYYKVITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTMESNSSVFLN
Ga0206126_10022570113300020595SeawaterMKATKDFNMSLYYTIITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTMESNSSVFLNASIAQA
Ga0206126_1052123413300020595SeawaterMKTTKDFNMSLYYGIITSASSHKRLLEDEQKKALSNERKDYLKEKISEQDHIIQTLENNSSVFLNASIDNI
Ga0181557_103699713300020601Salt MarshMSLYFGIISSAQNYKILLEDEQKKALSEERKNYLKAKVAEQDHIIEAMENNSSVFLNASVDNN
Ga0206123_1005957533300021365SeawaterMKATKDFNMSLYYTIITSASSHKRLLEDEQKKALSNERKDYLKEKISEQDHIIQTIESNSSVFLNASIAQA
Ga0206123_1028304813300021365SeawaterMKTTKDFNMSLYYKVITSASSHKRLLEDEQKKALSEERKDYLQEKISEQDHIIQTMENNSSVFLSASVD
Ga0213863_1039312513300021371SeawaterMKATKDFNMSLYFGIINSASRHKILIEDELKNVLSEERKQYLQAQILEQDHIIQTMESNSSVFLNASIAQA
Ga0222717_1001275433300021957Estuarine WaterMKATKDFNMSLYFGIISSASRHKMLIEDELKKALSEERKQYLQAQILEQDYIIKTIEDNSSIFLNASIDNTQE
Ga0222717_1001358763300021957Estuarine WaterMKTTKDFNMSLYFGIINSASRHKILIEDELKNVLSEERKQYLQAQILEQDHIIQTMESNSSVFLNASIAQA
Ga0222717_1004795263300021957Estuarine WaterMKATKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTMESNSSVFLNASIAQA
Ga0222717_1028391923300021957Estuarine WaterMKTTKDFNISLYYNIITSASSHKILLEDEQKKAISEERKDYLKEKISEQDHIIQTMESNSSVFLNVSVDNI
Ga0222717_1031502223300021957Estuarine WaterMKTTKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIETMENNSSVFLNASVDNN
Ga0222718_1010102963300021958Estuarine WaterMKTTKDFNMSLYFGIISSASRHKTLIEDELKNVLSEERKQYLQAQILEQDHIIQTMENNSSVFLNASIAQA
Ga0222716_1000338513300021959Estuarine WaterMKTTKDFNISLYYKVITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIETMENNSSVFLNASVDNN
Ga0212023_104675423300022061AqueousMSLYYGIITSASSHKRLLEDEQKKALSNERKDYLKEKISEQDHIIQTLENNSSVFLNASIDNI
Ga0212024_106847823300022065AqueousGYGIITSASSHKRLLEDEQKKALSNERKDYLKEKISEQDHIIQTLENNSSVFLNASIDNI
Ga0196889_102173633300022072AqueousMSYPLCYNXTMKTTKDFNMSLYYGIITSASSHKRLLEDEQKKALSNERKDYLKEKISEQDHIIQTLENNSSVFLNASIDNI
Ga0196887_110253613300022178AqueousDFNMSLYYKVITSASSHKRLLEDEQKKALSEERKDYLQEKISEQDHIIQTMENNSSVFLNASVDNN
(restricted) Ga0233411_1020761423300023112SeawaterMKTTKDFNISLYYNIITSASSHKILLEDEQKKAMSEERKSYLQEKISEQDHIIETMENNSSVFLNASVDNN
(restricted) Ga0233412_1001687713300023210SeawaterMKTTKDFNISLYYKIITSASSHKILLEDEQKKAMSEERKSYLQEKISEQDHIIETMENNS
Ga0228623_101329143300024267SeawaterMKTTKDFNISLYYNIITSASSHKILLEDEQKKAISEERKDYLKEKISEQDHIIQTMESNSSVFLNASIAQA
Ga0233398_114230423300024320SeawaterMKTTKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLQEKISEQDYIIETMENNSSVFLNAS
Ga0228652_102521733300024326SeawaterMKATKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTMESNSSVFLNVSVDNI
Ga0209992_1042625613300024344Deep SubsurfaceMKTTKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTMENNSSVFLNASVDNN
(restricted) Ga0255046_1007926623300024519SeawaterMKTTKDFNISLYYKIITSASSHKILLEDEQKKAMSEERKSYLQEKISEQDHIIEAMENNSSVFLNASVDNI
Ga0209645_107248223300025151MarineMKATKDFNMSLYFGIISSASRHKTLIEDELKKAISEERKQYLQAQISEQDNIIKTMEDNSSVFLDASIAQA
Ga0208303_105179423300025543AqueousMKTTKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLQEKISEQDHIIQTMENNSSVFLNASVDNN
Ga0209043_102308833300025667MarineMKATKDFNMSLYFGIISSASKHKMLIEDELKKALSEERKQYLQAQILEQDYIIKTIEDNTSIFLNASIDNTQE
Ga0209532_105528543300025696Pelagic MarineMSLYFGIISSASRHKILIEDELKKALSEERKQYLQAQILEQDNIIKTIEDNSSVFLNASIDNAQG
Ga0208545_111737323300025806AqueousMKTTKDFNMSLYYKVITSASSHKRLLEDEQKKALSEERKDYLQEKISEQDHIIQTMENNSSVFLNASVD
Ga0209199_127595313300025809Pelagic MarineMKATKDFNMSLYFGIISSASRHKILIEDELKKALSEERKQYLQAQILEQDNIIKTIEDNSSVFLNASIDN
Ga0209666_106584213300025870MarineMSLYFGIISSASRHKMLIEDELKKALSEERKQYLQAQILEQDYIIKTIEDNTSIFLNASIDNTQE
Ga0209309_1001457233300025881Pelagic MarineMKTTKDFNMSLYYKVITSASSHKRLLEDEQKKALSEERKDYLQEKISEQDHIIQTMENNSSVFLNASVDNI
Ga0209309_1031813033300025881Pelagic MarineMKTTKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQ
Ga0208763_1001299103300026136MarineMKTTKDFNMSLYFGIISSASRHKILIEDELKKALSEERKQYLQAQILEQDYIIKRIENNASIFLDASIDNTQE
Ga0228622_110607213300026479SeawaterMKATKDFNISLYYKIITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTME
(restricted) Ga0233414_1018535123300028045SeawaterMKTTKDFNISLYYKIITSASSHKILLEDEQKKAMSEERKSYLQEKISEQDHIIETMENNSSVFLNASVDNN
Ga0228608_111013523300028136SeawaterDFNISLYYNIITSASSHKILLEDEQKKAISEERKDYLKEKISEQDHIIQTMESNSSVFLNVSVDNI
Ga0265303_1078781923300028600SedimentMKTTKDFNMSLYYKVITSASSHKRLLEDEQKKALSEERKDYLKEKISEQDHIIQTIESNSSVFLNASIAQA
Ga0183755_101278183300029448MarineMKTTKDFNMSLYYTIITSASSHKRLLEDEQKKALSNERKDYLKEKISEQDHIIQTMESNSSVFLNASIAQA
Ga0183755_105251913300029448MarineYTIITSASSHKRLLEDEQKKALSNERKDYLQAKISEQDHIIKTMEDNSSVFLGASIDNAQ
Ga0316202_1002478593300032277Microbial MatYKVITSASSHKRLLEDEQKKALSEERKDYLQEKISEQDHIIQTMENNSSVFLNASVDNN


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