Metagenome / Metatranscriptome Family F092092

Basic Information
Family ID	F092092
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	40 residues
Representative Sequence	MSKLEDKVNEILGIDKPEPKKEIVKQEFKPAVPRRDD
Number of Associated Samples	77
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	3.70 %
% of genes near scaffold ends (potentially truncated)	98.13 %
% of genes from short scaffolds (< 2000 bps)	81.31 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Most Common Taxonomy
Group	Unclassified (43.925 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater (18.692 % of family members)
Environment Ontology (ENVO)	Unclassified (58.879 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (89.720 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.85% β-sheet: 0.00% Coil/Unstructured: 86.15%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF13640	2OG-FeII_Oxy_3	14.95
PF13759	2OG-FeII_Oxy_5	14.02
PF04820	Trp_halogenase	6.54
PF16724	T4-gp15_tss	4.67
PF16778	Phage_tail_APC	0.93
PF01833	TIG	0.93
PF00622	SPRY	0.93
PF13385	Laminin_G_3	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.07 %
Unclassified	root	N/A	43.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.93 %
cellular organisms	root	All Organisms → cellular organisms	28.97 %
Viruses	superkingdom	All Organisms → Viruses	27.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.10 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	18.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.61 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.56 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	18.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.61 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.93 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	18.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	14.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.74 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.93 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.93 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	18.69 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	14.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.61 %
Euryarchaeota archaeon TMED97	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon TMED97	0.93 %
Maricaulales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales	0.93 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.93 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	0.93 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.93 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	17.76 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	14.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.61 %
Maricaulaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae	0.93 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	0.93 %
Euryarchaeota archaeon TMED97	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon TMED97	0.93 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.93 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	14.02 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	11.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.61 %
Autographiviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	3.74 %
Rickettsiales bacterium TMED131	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED131	0.93 %
Maricaulis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis	0.93 %
Euryarchaeota archaeon TMED97	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon TMED97	0.93 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.93 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	14.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.61 %
unclassified Myoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae	2.80 %
Stopavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Stopavirus	2.80 %
unclassified Maricaulis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → unclassified Maricaulis	0.93 %
Pelagivirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pelagivirus	0.93 %
Tevenvirinae	subfamily	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Tevenvirinae	0.93 %
Rickettsiales bacterium TMED131	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED131	0.93 %
Euryarchaeota archaeon TMED97	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon TMED97	0.93 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.93 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	14.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.61 %
Pelagibacter phage HTVC008M	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	2.80 %
Pelagibacter virus HTVC011P	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Stopavirus → Pelagibacter virus HTVC011P	2.80 %
Pelagibacter virus HTVC019P	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pelagivirus → Pelagibacter virus HTVC019P	0.93 %
Tequatrovirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Tevenvirinae → Tequatrovirus	0.93 %
Maricaulis sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → unclassified Maricaulis → Maricaulis sp.	0.93 %
Rickettsiales bacterium TMED131	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED131	0.93 %
Euryarchaeota archaeon TMED97	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon TMED97	0.93 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.93 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	14.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.61 %
Pelagibacter phage HTVC011P	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Stopavirus → Pelagibacter virus HTVC011P → Pelagibacter phage HTVC011P	2.80 %
Pelagibacter phage HTVC008M	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	2.80 %
Pelagibacter phage HTVC019P	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pelagivirus → Pelagibacter virus HTVC019P → Pelagibacter phage HTVC019P	0.93 %
Tequatrovirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Tevenvirinae → Tequatrovirus	0.93 %
Maricaulis sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → unclassified Maricaulis → Maricaulis sp.	0.93 %
Rickettsiales bacterium TMED131	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED131	0.93 %
Euryarchaeota archaeon TMED97	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon TMED97	0.93 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.93 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2222084006\|2223608537	Not Available	533	Open in IMG/M
3300000115\|DelMOSum2011_c10090735	Not Available	1030	Open in IMG/M
3300000116\|DelMOSpr2010_c10049211	All Organisms → cellular organisms → Bacteria	1854	Open in IMG/M
3300000949\|BBAY94_10197811	Not Available	541	Open in IMG/M
3300006027\|Ga0075462_10201258	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	599	Open in IMG/M
3300006405\|Ga0075510_10116269	Not Available	692	Open in IMG/M
3300006735\|Ga0098038_1106876	Not Available	961	Open in IMG/M
3300006802\|Ga0070749_10006543	All Organisms → Viruses	7647	Open in IMG/M
3300006802\|Ga0070749_10083571	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1905	Open in IMG/M
3300006802\|Ga0070749_10446233	All Organisms → cellular organisms → Bacteria → Proteobacteria	709	Open in IMG/M
3300006802\|Ga0070749_10598153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	595	Open in IMG/M
3300006810\|Ga0070754_10006394	All Organisms → Viruses	7820	Open in IMG/M
3300006810\|Ga0070754_10149258	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	1118	Open in IMG/M
3300006810\|Ga0070754_10306484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	711	Open in IMG/M
3300006916\|Ga0070750_10088112	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1449	Open in IMG/M
3300007345\|Ga0070752_1301161	Not Available	611	Open in IMG/M
3300007539\|Ga0099849_1056323	All Organisms → Viruses → Predicted Viral	1626	Open in IMG/M
3300007539\|Ga0099849_1202149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	747	Open in IMG/M
3300007539\|Ga0099849_1288676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	594	Open in IMG/M
3300007960\|Ga0099850_1006694	Not Available	5340	Open in IMG/M
3300007960\|Ga0099850_1073053	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1437	Open in IMG/M
3300009000\|Ga0102960_1029783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2033	Open in IMG/M
3300009000\|Ga0102960_1070518	Not Available	1281	Open in IMG/M
3300009000\|Ga0102960_1313042	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	554	Open in IMG/M
3300009001\|Ga0102963_1253047	Not Available	697	Open in IMG/M
3300009001\|Ga0102963_1374156	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300009507\|Ga0115572_10498861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → unclassified Maricaulis → Maricaulis sp.	675	Open in IMG/M
3300010153\|Ga0098059_1364985	Not Available	547	Open in IMG/M
3300010318\|Ga0136656_1053259	Not Available	1454	Open in IMG/M
3300010318\|Ga0136656_1283434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED131	541	Open in IMG/M
3300012920\|Ga0160423_10138745	All Organisms → Viruses → Predicted Viral	1709	Open in IMG/M
3300012953\|Ga0163179_10283930	All Organisms → Viruses → Predicted Viral	1303	Open in IMG/M
3300012954\|Ga0163111_10682736	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300017710\|Ga0181403_1109340	Not Available	578	Open in IMG/M
3300017713\|Ga0181391_1018903	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Stopavirus → Pelagibacter virus HTVC011P → Pelagibacter phage HTVC011P	1725	Open in IMG/M
3300017713\|Ga0181391_1019480	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Stopavirus → Pelagibacter virus HTVC011P → Pelagibacter phage HTVC011P	1696	Open in IMG/M
3300017713\|Ga0181391_1032696	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300017713\|Ga0181391_1054542	All Organisms → cellular organisms → Bacteria → Proteobacteria	938	Open in IMG/M
3300017714\|Ga0181412_1160465	Not Available	502	Open in IMG/M
3300017721\|Ga0181373_1093820	Not Available	531	Open in IMG/M
3300017724\|Ga0181388_1067210	Not Available	857	Open in IMG/M
3300017730\|Ga0181417_1167733	Not Available	529	Open in IMG/M
3300017731\|Ga0181416_1061984	Not Available	883	Open in IMG/M
3300017741\|Ga0181421_1165890	Not Available	570	Open in IMG/M
3300017742\|Ga0181399_1122350	Not Available	636	Open in IMG/M
3300017750\|Ga0181405_1006073	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	3572	Open in IMG/M
3300017752\|Ga0181400_1116719	Not Available	773	Open in IMG/M
3300017760\|Ga0181408_1165918	Not Available	566	Open in IMG/M
3300017765\|Ga0181413_1255261	Not Available	516	Open in IMG/M
3300017768\|Ga0187220_1006234	All Organisms → cellular organisms → Bacteria → Proteobacteria	3622	Open in IMG/M
3300017771\|Ga0181425_1008639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3451	Open in IMG/M
3300017773\|Ga0181386_1059401	Not Available	1221	Open in IMG/M
3300017773\|Ga0181386_1093538	Not Available	941	Open in IMG/M
3300017786\|Ga0181424_10030471	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2342	Open in IMG/M
3300017824\|Ga0181552_10517125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	561	Open in IMG/M
3300017950\|Ga0181607_10615498	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pelagivirus → Pelagibacter virus HTVC019P → Pelagibacter phage HTVC019P	570	Open in IMG/M
3300017967\|Ga0181590_10056309	Not Available	3131	Open in IMG/M
3300017967\|Ga0181590_10179630	Not Available	1602	Open in IMG/M
3300017967\|Ga0181590_10354462	All Organisms → Viruses → Predicted Viral	1052	Open in IMG/M
3300018048\|Ga0181606_10050655	Not Available	2823	Open in IMG/M
3300018421\|Ga0181592_10024673	All Organisms → cellular organisms → Bacteria	4880	Open in IMG/M
3300018421\|Ga0181592_10417450	Not Available	944	Open in IMG/M
3300018421\|Ga0181592_10989646	Not Available	543	Open in IMG/M
3300018424\|Ga0181591_10193261	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1606	Open in IMG/M
3300020051\|Ga0181555_1126663	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1078	Open in IMG/M
3300020053\|Ga0181595_10041681	Not Available	2616	Open in IMG/M
3300020055\|Ga0181575_10552127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	610	Open in IMG/M
3300020175\|Ga0206124_10105868	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Tevenvirinae → Tequatrovirus	1162	Open in IMG/M
3300020177\|Ga0181596_10323078	Not Available	612	Open in IMG/M
3300020414\|Ga0211523_10214777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	796	Open in IMG/M
3300020421\|Ga0211653_10261835	Not Available	753	Open in IMG/M
3300020439\|Ga0211558_10138435	Not Available	1177	Open in IMG/M
3300020441\|Ga0211695_10386696	Not Available	528	Open in IMG/M
3300020595\|Ga0206126_10211634	Not Available	899	Open in IMG/M
3300021356\|Ga0213858_10147113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1150	Open in IMG/M
3300021364\|Ga0213859_10184830	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300021425\|Ga0213866_10578150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	527	Open in IMG/M
3300021957\|Ga0222717_10274905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	970	Open in IMG/M
3300021957\|Ga0222717_10277997	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	963	Open in IMG/M
3300021958\|Ga0222718_10027043	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	3890	Open in IMG/M
3300021958\|Ga0222718_10036805	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Stopavirus → Pelagibacter virus HTVC011P → Pelagibacter phage HTVC011P	3219	Open in IMG/M
3300021958\|Ga0222718_10211244	Not Available	1053	Open in IMG/M
3300021958\|Ga0222718_10293930	Not Available	846	Open in IMG/M
3300021958\|Ga0222718_10375006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	717	Open in IMG/M
3300021958\|Ga0222718_10389617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	699	Open in IMG/M
3300021958\|Ga0222718_10591143	Not Available	522	Open in IMG/M
3300021960\|Ga0222715_10042623	All Organisms → Viruses → Predicted Viral	3183	Open in IMG/M
3300021961\|Ga0222714_10263643	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	960	Open in IMG/M
3300021964\|Ga0222719_10050781	Not Available	3160	Open in IMG/M
3300021964\|Ga0222719_10202938	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	1354	Open in IMG/M
3300021964\|Ga0222719_10227237	Not Available	1256	Open in IMG/M
3300021964\|Ga0222719_10250273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1178	Open in IMG/M
3300022842\|Ga0222632_1006728	All Organisms → Viruses	2497	Open in IMG/M
3300022843\|Ga0222631_1023597	Not Available	900	Open in IMG/M
3300023176\|Ga0255772_10118498	Not Available	1632	Open in IMG/M
3300025137\|Ga0209336_10015213	Not Available	2885	Open in IMG/M
3300025138\|Ga0209634_1120060	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon TMED97	1123	Open in IMG/M
3300025646\|Ga0208161_1049173	All Organisms → Viruses → Predicted Viral	1360	Open in IMG/M
3300025674\|Ga0208162_1006753	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	5158	Open in IMG/M
3300025680\|Ga0209306_1138635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	697	Open in IMG/M
3300025769\|Ga0208767_1039553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2318	Open in IMG/M
3300025771\|Ga0208427_1185134	Not Available	669	Open in IMG/M
3300025822\|Ga0209714_1124658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	684	Open in IMG/M
3300025892\|Ga0209630_10263490	Not Available	802	Open in IMG/M
3300026138\|Ga0209951_1048170	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	917	Open in IMG/M
3300031647\|Ga0308012_10173226	Not Available	849	Open in IMG/M
3300032073\|Ga0315315_10890082	Not Available	805	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.07%
Algae	Host-Associated → Algae	0.93%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	91.59%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	7.48%
Green Algae	Host-Associated → Algae → Green Algae	0.93%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	23.36%
Unclassified	Environmental → Aquatic → Marine → Unclassified	18.69%
Strait	Environmental → Aquatic → Marine → Strait	18.69%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	14.95%
Oceanic	Environmental → Aquatic → Marine → Oceanic	8.41%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	7.48%
Pelagic	Environmental → Aquatic → Marine → Pelagic	4.67%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	2.80%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	23.36%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	18.69%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	18.69%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	14.02%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	7.48%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	5.61%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	4.67%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	2.80%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.87%
Oil-Contaminated	Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated	0.93%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.93%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	18.69%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	18.69%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	14.02%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	14.02%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	5.61%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	4.67%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.74%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.80%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	2.80%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	1.87%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.87%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.87%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	1.87%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	1.87%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.93%
Marine	Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated → Marine	0.93%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.93%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.93%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.93%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2222084006	Marine microbial communities from Deepwater Horizon oil blowout, Alabama, USA - oil_dispersant_7	Environmental	Open in IMG/M
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000949	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94	Host-Associated	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006405	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017714	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15	Environmental	Open in IMG/M
3300017721	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaG	Environmental	Open in IMG/M
3300017724	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17	Environmental	Open in IMG/M
3300017730	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017741	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19	Environmental	Open in IMG/M
3300017742	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017752	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020051	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020053	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)	Environmental	Open in IMG/M
3300020055	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020177	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)	Environmental	Open in IMG/M
3300020414	Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)	Environmental	Open in IMG/M
3300020421	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)	Environmental	Open in IMG/M
3300020439	Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029)	Environmental	Open in IMG/M
3300020441	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_078 - TARA_B100000524 (ERX556088-ERR599006)	Environmental	Open in IMG/M
3300020595	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022842	Saline water microbial communities from Ace Lake, Antarctica - #46	Environmental	Open in IMG/M
3300022843	Saline water microbial communities from Ace Lake, Antarctica - #5	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025680	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025771	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025822	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414 (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300026138	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300031647	Marine microbial communities from water near the shore, Antarctic Ocean - #179	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092092

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2224062671	2222084006	Marine	MSKLEDKVNEILGIDKPEPKKKLSNKSSNLQVPRRDDDSKAECR
DelMOSum2011_100907351	3300000115	Marine	MSKLEEKVNEILGIDKPEPSKQVVKQEVKPPVPRMEDAKKADVD
DelMOSpr2010_100492114	3300000116	Marine	MSKLEEKVNEILGIDKPEPSKQVVKQEVKPPVPRMEDAKKA
BBAY94_101978111	3300000949	Macroalgal Surface	MSKLEDKVNEILGIDKPEPKKEIVKQEFKPAVPRK
Ga0075462_102012582	3300006027	Aqueous	MSKLEDKVNEILGIDKSEPKKEIVKQEFKPAVPRKDD
Ga0075510_101162693	3300006405	Aqueous	MSKLEDKVNEILGINEPEPKKEVVKQDFKPAVPRRED
Ga0098038_11068761	3300006735	Marine	MSKLEEKVNEILGIDKPEPSKQVVKQEIKPPVPRVEDAKKPDVD
Ga0070749_1000654311	3300006802	Aqueous	MSKLEDKVNEILGINEPEPKKEIVKQDFKPVVPRREDNEKADV
Ga0070749_100835713	3300006802	Aqueous	MSKLEDKVNEILGIDKPEPKKEIVKQEFKPAVPRRDD
Ga0070749_104462332	3300006802	Aqueous	MTKLEDKVNEILGIDKPEPKKEIVKQDFKPVVPRREDND
Ga0070749_105981532	3300006802	Aqueous	MSKLEDKVNEILGIDKPEPKKEIVKQEFKPAVPRRDDDSK
Ga0070754_1000639411	3300006810	Aqueous	MSKLEDKVNEILGINEPEPKKEIVKQDFKPVVPRREDNEKADVDND*
Ga0070754_101492582	3300006810	Aqueous	MSKLEDKVNEILGIDKPEPKKEIVKQEFKPAVPRRDDDSKADVD
Ga0070754_103064841	3300006810	Aqueous	MSKLEDKVNEILGIDKPEPKKEIVKQEFKPAVPRRD
Ga0070750_100881124	3300006916	Aqueous	MSKLEDKVNEILGIDKPEPKKEIVKQEFKPAVPRKDD
Ga0070752_13011612	3300007345	Aqueous	MTKLEDKVNEILGIDKPEPKKEIVKQDFKPAVPRR
Ga0099849_10563233	3300007539	Aqueous	MTKLEDKVNEILGIDKPEPKKEIVKQDFKPVVPRREDNDKADV
Ga0099849_12021491	3300007539	Aqueous	MSKLEDKVNEILGIDKPETKELVKQDFKPVVPRKENKESPDVD
Ga0099849_12886762	3300007539	Aqueous	MSKLEEKVNEILGIDKPEPSKEIVKQDFKPAVPRKEDE
Ga0099850_10066941	3300007960	Aqueous	MSKLEDKVNEILGIDKPETKELVKQDFKPVVPRKENKESP
Ga0099850_10730533	3300007960	Aqueous	MTKLEDKVNEILGIDKPEPKKEIVKQEFKPAVPRRDDDSKADVDN
Ga0102960_10297834	3300009000	Pond Water	MSKLEDKVNEILGINEPEPKKEVVKQEFKPAVPRREDDNKADVD
Ga0102960_10705182	3300009000	Pond Water	MTKLEDKVNEILGINEPETKKEVVKQDFKPAVPRKEETD
Ga0102960_13130423	3300009000	Pond Water	MSKLEDKVNEILGINEPEPKKEVVKQDFKPAVPRR
Ga0102963_12530472	3300009001	Pond Water	MTKLEDKVNEILGINEPETKKEVVKQDFKPAVPRKED
Ga0102963_13741561	3300009001	Pond Water	MSKLEDKVNEILGIDKPEPKKEIVKQEFKPAVPRRDDDSKADV
Ga0115572_104988612	3300009507	Pelagic Marine	MSKLEKKVNEILGIDKPEPKKEIVKQEFKPVVPRKEETGKADVD
Ga0098059_13649852	3300010153	Marine	MSKLEEKVNEILGIDKPEPSKQVVKQEVKPPVPRME
Ga0136656_10532591	3300010318	Freshwater To Marine Saline Gradient	MSKLEDKVNEILGIDKPEPKKEIVKQEFKPAVPRR
Ga0136656_12834343	3300010318	Freshwater To Marine Saline Gradient	MSKLEDKVNEILGIDKPEPKKEIVKQDFKPIVPRREDNDKADVDND
Ga0160423_101387451	3300012920	Surface Seawater	MSKLEEKVNEILGIDKPEPTKEIVKQEFKPAVPRKEDDKKAD
Ga0163179_102839303	3300012953	Seawater	LININMTKLEDKVNEILGIDKPEPTKAVVKQEFKPVVPRK
Ga0163111_106827361	3300012954	Surface Seawater	MSKLEDKVNEILGINEKKPSKAVVKQEFKPAVPRREDNNKAD
Ga0181403_11093401	3300017710	Seawater	MSKLEDKVNEILGIDTPEPSKQVVKQEIKPPVPRVEDAKKPDVDN
Ga0181391_10189033	3300017713	Seawater	MSKLEDKVNEILGIDTPEPSKQVVKQEIKPPVPRVE
Ga0181391_10194803	3300017713	Seawater	MSKLEEKVNEILGIDKPEPSKQVVKQEIKPPVPRVEDAK
Ga0181391_10326963	3300017713	Seawater	MSKLEEKVNEILGIDKPEPSKQVVKQEVKPPVPRM
Ga0181391_10545423	3300017713	Seawater	MSKLEEKVNEILGIDKPEPSKQVVKQETKPPVPRMEDAKKADV
Ga0181412_11604651	3300017714	Seawater	MSKLEEKVNEILGIDKPEPSKEIVKQEFKPAVPRKED
Ga0181373_10938202	3300017721	Marine	MSKLEEKVNEILGIDKPEPSKQVVKQEIKPPVPRMEDA
Ga0181388_10672102	3300017724	Seawater	MSKLEEKVNEILGIDKPEPSKQVVKQEVKPPVPRMEDAK
Ga0181417_11677332	3300017730	Seawater	MTKLEDKVNEILGIDKPEPSKQVVKQEIKPPVPRVEDAK
Ga0181416_10619841	3300017731	Seawater	MSKLEEKVNEILGIDKPEPSKQVVKQEVKPPVPRMEDAKKADVDND
Ga0181421_11658902	3300017741	Seawater	MSKLEDKVNEILGIDKKEPSKEIIKQEFKPAVPRREDD
Ga0181399_11223502	3300017742	Seawater	MSKLEEKVNEILGIDKPEPSKQVVKQEVKPPVPRMEDAKK
Ga0181405_10060734	3300017750	Seawater	MSKLEEKVNEILGIDKPEPSKQVVKQEIKPPVPRVE
Ga0181400_11167191	3300017752	Seawater	MTKLEEKVNEILGIDTPEPSKQVVKQDIKPPVPRMEDAK
Ga0181408_11659181	3300017760	Seawater	MALEDKVNEILGIDTPEKKEEKEFKPPVARVEEKAKDDVDNDHKNSREY
Ga0181413_12552612	3300017765	Seawater	MSKLEEKVNEILGIDKPEPTKEIVKQEFKPAVPRKEDDKKA
Ga0187220_10062346	3300017768	Seawater	MSKLEEKVNEILGIDKPEPSKQVVKQETKPPVPRMEDAK
Ga0181425_10086391	3300017771	Seawater	MTKLEDKVNEILGIDTPEPTKQIVKQEIKPPVPRMEDAKKAD
Ga0181386_10594011	3300017773	Seawater	SKLEEKVNEILGIDKPEPSKEIVKQEFKPAVPRKEDDKKAEVGND
Ga0181386_10935383	3300017773	Seawater	MSKLEEKVNEILGIDKPEPSKEIVKQEFKPAVPRKEDDKKA
Ga0181424_100304713	3300017786	Seawater	MSKLEEKVNEILGIDKPEPSKQVVKQEIKPPVPRVEDAKK
Ga0181552_105171252	3300017824	Salt Marsh	MSKLEEKVNEILGIDKPEPTKEIVKQEFKPAVPRKDD
Ga0181607_106154983	3300017950	Salt Marsh	MTKLEDKVNEILGIDKPEPKKEIVKQDFKPVVPRREDN
Ga0181590_100563091	3300017967	Salt Marsh	MSKLEDKVNEILGIDKPEPKKEIVKQEFKPAVPRRDDDSKA
Ga0181590_101796301	3300017967	Salt Marsh	MTKLEDKVNEILGIDKPEPKKEIVKQDFKPVVPRRED
Ga0181590_103544621	3300017967	Salt Marsh	MTKLEDKVNEILGIDKPEPKKEIVKQDFKPVVPRREDNDKA
Ga0181606_100506551	3300018048	Salt Marsh	MSKLEDKVNEILGIDKPEPKKEIVKQEFKPAVPRKDDDSK
Ga0181592_100246738	3300018421	Salt Marsh	MTKLEDKVNEILGIDKPEPKKEIVKQDFKPAVPRKEDKES
Ga0181592_104174501	3300018421	Salt Marsh	MTRLEDKVNEILGIDKPEPKKEIVKQDFKPVVPRRED
Ga0181592_109896462	3300018421	Salt Marsh	MTKLEDKVNEILGIDKPEPKKEIVKQDFKPVVPRREDNEKADVD
Ga0181591_101932614	3300018424	Salt Marsh	MSKLEDKVNEILGIDKPEPKKEIVKQDFKPVVPRRE
Ga0181555_11266633	3300020051	Salt Marsh	MSKLEDKVNEILGIDKPEPKKEIVKQEFKPAVPRRDDDSKAD
Ga0181595_100416811	3300020053	Salt Marsh	MTKLEDKVNEILGIDKPEPKKEIVKQDFKPVVPRREDNDKADVD
Ga0181575_105521271	3300020055	Salt Marsh	MSKLEEKVNEILGIDKPEPKKEIVKQEFKPAVPRREDEKKED
Ga0206124_101058681	3300020175	Seawater	MSKLEDKVNEILGIDTPEPTKELVKAKEIKPPVPRMEDAKKADF
Ga0181596_103230781	3300020177	Salt Marsh	MSKLEDKVNEILGIDKPEPKKEIVKQEFKPAVPRRDDDS
Ga0211523_102147771	3300020414	Marine	MSKLEKQVNEILGIDSKEPSKEIVKQEFKPAVPRKEDD
Ga0211653_102618351	3300020421	Marine	MSKLEDKVNEILGIDKPEPSKQVVKQEIKPPVPRVEDAKKPDVD
Ga0211558_101384351	3300020439	Marine	MSKLEDKVNEILGIDKQEPSKQIVKQEFKPAVPRREDDKKADV
Ga0211695_103866961	3300020441	Marine	MSKLEEKVNEILGIDKKEPSKEIVKQEFKPAVPRRE
Ga0206126_102116341	3300020595	Seawater	MSKLEDKVNEILGIDTPEPTKEIVKQEFKPAVPRTEDKEAPNVDNDY
Ga0213858_101471133	3300021356	Seawater	MSKLEKQVNEILGIEPKEPSKEIVKQEFKPAVPRREDNKKAD
Ga0213859_101848301	3300021364	Seawater	MSKLEDKVNEILGINEPEPKKEIVKQDFKPVVPRREDNEK
Ga0213866_105781501	3300021425	Seawater	MSKLEDKVNEILGIDKPEPKKEIVKQEFKPAVPRKDDDSKA
Ga0222717_102749053	3300021957	Estuarine Water	MSKLEDKVNEILGINEPEPKKEVVKQEFKPAVPRRDDDS
Ga0222717_102779971	3300021957	Estuarine Water	MSKLEEKVNEILGIDKPEPSKQVVKQDIKPPVPRMEDAKKA
Ga0222718_100270431	3300021958	Estuarine Water	MTKLEDKVNEILGINEPEPKKEVVKQDFKPAVPRREDNDK
Ga0222718_100368054	3300021958	Estuarine Water	MTKLEDKVNEILGIDKPEPKKEIVKQDFKPVVPRREDNDK
Ga0222718_102112442	3300021958	Estuarine Water	MTKLEDKVNEILGIDKPEPKKEIVKQEFKPAVPRKEDNNKADVDN
Ga0222718_102939303	3300021958	Estuarine Water	MSKLEDKVNEILGINEPEPKKEVVKQEFKPAVPRREDDNKADVDN
Ga0222718_103750061	3300021958	Estuarine Water	MSKLEDKVNEILGINEPEPKKEVVKQEFKPAVPRREDDNKAD
Ga0222718_103896171	3300021958	Estuarine Water	MTKLEDKVNEILGINEPEPKKEIVKQEFKPAVPRREDDN
Ga0222718_105911431	3300021958	Estuarine Water	MTKLEDKVNEILGIDKPEPTKEVVKQDFKPAVPRKEDNDKADVDN
Ga0222715_100426233	3300021960	Estuarine Water	MTKLEDKVNEILGIDKPEPKKEIVKQDFKPVVPRREDNEKADVDN
Ga0222714_102636431	3300021961	Estuarine Water	MSKLEDKVNEILGINEPEPKKEIVKQEFKPAVPRRDDDSKA
Ga0222719_100507813	3300021964	Estuarine Water	MTKLEDKVNEILGINEPETKKEVVKQDFKPAVPRKEDNNK
Ga0222719_102029383	3300021964	Estuarine Water	MSKLEDKVNEILGINEPEPKKEVVKQDFKPTVPRRE
Ga0222719_102272371	3300021964	Estuarine Water	MSKLEDKVNEILGINEPEPKKEVVKQEFKPAVPRREDDNKA
Ga0222719_102502731	3300021964	Estuarine Water	MTKLEDKVNEILGIDKPEPKKEIVKQDFKPVVPRREDNEKA
Ga0222632_10067281	3300022842	Saline Water	MSKLEDKVNEILGIDTPEPTKEIVKAKEIKPPVPRMED
Ga0222631_10235971	3300022843	Saline Water	MSKLEEKVNEILGIDTPEPTKEIVKAKEIKPPVPRMEDAKKPDVDN
Ga0255772_101184982	3300023176	Salt Marsh	MTKLEDKVNEILGIDKPEPKKEIVKQDFKPVVPRRE
Ga0209336_100152131	3300025137	Marine	MSKLEEKVNEILGIDKPEPSKQVVKQEVKPPVPRMEDAKKADV
Ga0209634_11200601	3300025138	Marine	MSKLEEKVNEILGIDKPEPSKQVVKQEVKPPVPRMEDA
Ga0208161_10491733	3300025646	Aqueous	MTKLEDKVNEILGINKPESKKEIVKQDFKPIVPRKE
Ga0208162_10067536	3300025674	Aqueous	MSKLEDKVNEILGIDKPEPKKEIVKQEFKPAVPRRDDD
Ga0209306_11386352	3300025680	Pelagic Marine	MSKLEDKVNEILGIDTPEPTKEIVKAKEIKPPVPR
Ga0208767_10395531	3300025769	Aqueous	MTKLEDKVNEILGIDKPEPKKEIVKQDFKPVVPRKEDNDKADVDND
Ga0208427_11851341	3300025771	Aqueous	MTKLEDKVNEILGIDKPEPKKEIVKQDFKPAVPRREDNDKADV
Ga0209714_11246581	3300025822	Pelagic Marine	MSKLEDKVNEILGIDTPEPTKEIVKAKEFKPMVPRAEDDKK
Ga0209630_102634901	3300025892	Pelagic Marine	MSKLEEKVNEILGIDKPEPTKEIVKQEFKPAVPRK
Ga0209951_10481701	3300026138	Pond Water	MSKLEDKVNEILGINEPEPKKEIVKQEFKPAVPRKDDD
Ga0308012_101732261	3300031647	Marine	MTKLEDKVNEILGINTPEPTKELVKKEDVKPPVPRTEDKT
Ga0315315_108900822	3300032073	Seawater	MSKLEEKVNEILGIDKPEPSKEIVKQEFKPAGPRKE

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign