Metagenome / Metatranscriptome Family F092120

Basic Information
Family ID	F092120
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	59 residues
Representative Sequence	LADAPEYGFKDALPDFVAGLCGFFGVASPVLGFVRLPVTLMVVGFVFWTAWRVFRSLS
Number of Associated Samples	56
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	98.13 %
% of genes from short scaffolds (< 2000 bps)	96.26 %
Associated GOLD sequencing projects	51
AlphaFold2 3D model prediction	No

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (99.065 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Phototrophic Mat (59.813 % of family members)
Environment Ontology (ENVO)	Unclassified (99.065 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (59.813 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.83% β-sheet: 0.00% Coil/Unstructured: 55.17%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00145	DNA_methylase	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.93

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.07 %
All Organisms	root	All Organisms	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.07 %
cellular organisms	root	All Organisms → cellular organisms	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.07 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Visualization

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Scaffold	Taxonomy	Length	IMG/M Link
3300002510\|JGI24186J35511_1031945	Not Available	832	Open in IMG/M
3300002510\|JGI24186J35511_1035584	Not Available	755	Open in IMG/M
3300002510\|JGI24186J35511_1051193	Not Available	554	Open in IMG/M
3300003688\|Ga0061020_1090066	Not Available	633	Open in IMG/M
3300005242\|Ga0068639_186769	Not Available	702	Open in IMG/M
3300005245\|Ga0068640_192990	Not Available	808	Open in IMG/M
3300005246\|Ga0068638_188600	Not Available	714	Open in IMG/M
3300005248\|Ga0068636_1004067	Not Available	788	Open in IMG/M
3300005248\|Ga0068636_1007544	Not Available	917	Open in IMG/M
3300005248\|Ga0068636_1014571	Not Available	837	Open in IMG/M
3300005248\|Ga0068636_1045156	Not Available	2280	Open in IMG/M
3300005250\|Ga0068635_1179812	Not Available	590	Open in IMG/M
3300005452\|Ga0068706_1056527	Not Available	710	Open in IMG/M
3300005453\|Ga0068705_10089442	Not Available	848	Open in IMG/M
3300005453\|Ga0068705_10128051	Not Available	647	Open in IMG/M
3300005453\|Ga0068705_10150963	Not Available	577	Open in IMG/M
3300005638\|Ga0068669_1051075	Not Available	617	Open in IMG/M
3300006363\|Ga0068659_1011557	Not Available	577	Open in IMG/M
3300006363\|Ga0068659_1129204	Not Available	732	Open in IMG/M
3300007000\|Ga0102499_1244000	Not Available	820	Open in IMG/M
3300007000\|Ga0102499_1331751	Not Available	516	Open in IMG/M
3300010178\|Ga0124934_1030991	Not Available	581	Open in IMG/M
3300010182\|Ga0124917_1035360	Not Available	599	Open in IMG/M
3300010182\|Ga0124917_1098049	Not Available	584	Open in IMG/M
3300010183\|Ga0124919_1109768	Not Available	839	Open in IMG/M
3300010184\|Ga0124920_1005862	Not Available	1566	Open in IMG/M
3300010184\|Ga0124920_1039169	Not Available	577	Open in IMG/M
3300010186\|Ga0124916_1109758	Not Available	1175	Open in IMG/M
3300010187\|Ga0124918_1002666	Not Available	777	Open in IMG/M
3300010187\|Ga0124918_1023894	Not Available	594	Open in IMG/M
3300010187\|Ga0124918_1061728	Not Available	797	Open in IMG/M
3300010187\|Ga0124918_1158707	Not Available	598	Open in IMG/M
3300010189\|Ga0124915_1024492	Not Available	614	Open in IMG/M
3300010189\|Ga0124915_1096238	Not Available	659	Open in IMG/M
3300010189\|Ga0124915_1118207	Not Available	680	Open in IMG/M
3300010191\|Ga0124914_1167716	Not Available	515	Open in IMG/M
3300010245\|Ga0124946_137561	Not Available	792	Open in IMG/M
3300010246\|Ga0124932_150170	Not Available	587	Open in IMG/M
3300010254\|Ga0124938_1110114	Not Available	588	Open in IMG/M
3300010257\|Ga0124913_1220678	Not Available	734	Open in IMG/M
3300010257\|Ga0124913_1260817	Not Available	719	Open in IMG/M
3300010272\|Ga0124912_1035385	Not Available	580	Open in IMG/M
3300010272\|Ga0124912_1350439	Not Available	724	Open in IMG/M
3300031245\|Ga0308395_1021594	Not Available	2106	Open in IMG/M
3300031245\|Ga0308395_1074234	Not Available	822	Open in IMG/M
3300031245\|Ga0308395_1144250	Not Available	514	Open in IMG/M
3300031508\|Ga0308394_1029929	Not Available	1449	Open in IMG/M
3300031508\|Ga0308394_1031468	Not Available	1395	Open in IMG/M
3300031508\|Ga0308394_1090828	Not Available	632	Open in IMG/M
3300031512\|Ga0308397_1039987	Not Available	1201	Open in IMG/M
3300031513\|Ga0308412_1040292	Not Available	1698	Open in IMG/M
3300031513\|Ga0308412_1095237	Not Available	903	Open in IMG/M
3300031515\|Ga0308396_1050386	Not Available	933	Open in IMG/M
3300031515\|Ga0308396_1073571	Not Available	718	Open in IMG/M
3300031516\|Ga0308398_1082401	Not Available	726	Open in IMG/M
3300031516\|Ga0308398_1117062	Not Available	567	Open in IMG/M
3300031516\|Ga0308398_1120206	Not Available	557	Open in IMG/M
3300031518\|Ga0308389_1130111	Not Available	536	Open in IMG/M
3300031568\|Ga0308393_1060238	Not Available	863	Open in IMG/M
3300031568\|Ga0308393_1109795	Not Available	582	Open in IMG/M
3300031568\|Ga0308393_1122149	Not Available	543	Open in IMG/M
3300031767\|Ga0308401_1049489	Not Available	855	Open in IMG/M
3300031783\|Ga0308418_1024569	Not Available	1736	Open in IMG/M
3300031783\|Ga0308418_1095233	Not Available	656	Open in IMG/M
3300031783\|Ga0308418_1139043	Not Available	510	Open in IMG/M
3300031812\|Ga0308411_10069355	Not Available	1478	Open in IMG/M
3300031812\|Ga0308411_10108360	Not Available	1050	Open in IMG/M
3300031812\|Ga0308411_10127078	Not Available	934	Open in IMG/M
3300031830\|Ga0308409_1071034	Not Available	819	Open in IMG/M
3300031830\|Ga0308409_1112613	Not Available	593	Open in IMG/M
3300031830\|Ga0308409_1120359	Not Available	567	Open in IMG/M
3300031865\|Ga0308408_1037041	Not Available	1251	Open in IMG/M
3300031865\|Ga0308408_1057953	Not Available	928	Open in IMG/M
3300031865\|Ga0308408_1130826	Not Available	540	Open in IMG/M
3300031875\|Ga0308405_1009600	Not Available	3610	Open in IMG/M
3300031875\|Ga0308405_1030036	Not Available	1666	Open in IMG/M
3300031878\|Ga0308404_1015269	Not Available	1761	Open in IMG/M
3300031878\|Ga0308404_1017849	Not Available	1594	Open in IMG/M
3300031948\|Ga0308406_1021029	Not Available	1682	Open in IMG/M
3300031950\|Ga0308417_1128482	Not Available	861	Open in IMG/M
3300031950\|Ga0308417_1155349	Not Available	748	Open in IMG/M
3300031950\|Ga0308417_1168325	Not Available	706	Open in IMG/M
3300031950\|Ga0308417_1257135	Not Available	524	Open in IMG/M
3300031958\|Ga0308410_1072005	Not Available	1035	Open in IMG/M
3300031980\|Ga0308403_1013524	Not Available	1981	Open in IMG/M
3300031980\|Ga0308403_1053711	Not Available	831	Open in IMG/M
3300031980\|Ga0308403_1111448	Not Available	526	Open in IMG/M
3300032033\|Ga0308402_1076297	Not Available	644	Open in IMG/M
3300032033\|Ga0308402_1104658	Not Available	533	Open in IMG/M
3300032034\|Ga0308407_1090386	Not Available	634	Open in IMG/M
3300032045\|Ga0308400_1029150	Not Available	1326	Open in IMG/M
3300032057\|Ga0308421_1028296	Not Available	1762	Open in IMG/M
3300032058\|Ga0308419_1092417	Not Available	888	Open in IMG/M
3300032058\|Ga0308419_1092791	Not Available	885	Open in IMG/M
3300032058\|Ga0308419_1121671	Not Available	715	Open in IMG/M
3300032058\|Ga0308419_1146223	Not Available	620	Open in IMG/M
3300032058\|Ga0308419_1184595	Not Available	520	Open in IMG/M
3300032356\|Ga0308414_1003873	All Organisms → cellular organisms → Bacteria	9423	Open in IMG/M
3300033886\|Ga0308413_092166	Not Available	769	Open in IMG/M
3300034449\|Ga0372963_24096	Not Available	548	Open in IMG/M
3300034647\|Ga0372968_039382	Not Available	598	Open in IMG/M
3300034647\|Ga0372968_045801	Not Available	541	Open in IMG/M
3300034648\|Ga0372970_060366	Not Available	520	Open in IMG/M
3300034649\|Ga0372972_034060	Not Available	728	Open in IMG/M
3300034649\|Ga0372972_038155	Not Available	673	Open in IMG/M
3300034649\|Ga0372972_050788	Not Available	558	Open in IMG/M
3300034650\|Ga0372973_061307	Not Available	515	Open in IMG/M

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Thermal Springs	Environmental → Aquatic → Thermal Springs	100.00%

Habitat	Taxonomy	Distribution
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Hot Spring Phototrophic Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Phototrophic Mat	59.81%
Anoxygenic And Chlorotrophic Microbial Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic Microbial Mat	36.45%
Anoxygenic And Chlorotrophic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic	3.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002510	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant MS upper layer 2012	Environmental	Open in IMG/M
3300003688	Coassembly of YNP Bryant MS undermat 2012 and YNP Bryant MS upper layer 2012	Environmental	Open in IMG/M
3300005242	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0300_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005245	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0600_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005246	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_2300_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005248	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1900_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005250	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1800_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005452	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-B MetaG	Environmental	Open in IMG/M
3300005453	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-T MetaG	Environmental	Open in IMG/M
3300005638	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1700(2)_B MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006363	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0600_B MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007000	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1700(2)_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010178	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0700_B MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010182	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0300_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010183	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0700_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010184	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0800_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010186	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_2300_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010187	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0600_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010189	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_2000_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010191	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1900_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010245	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP NP_1900 MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010246	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_2300_B MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010254	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1400(2)_B MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010257	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1800_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010272	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1700_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031245	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050930_P4	Environmental	Open in IMG/M
3300031508	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_me2	Environmental	Open in IMG/M
3300031512	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20051001_T8	Environmental	Open in IMG/M
3300031513	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST1-BottomLayer	Environmental	Open in IMG/M
3300031515	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050930_Pe2	Environmental	Open in IMG/M
3300031516	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20051001_T9	Environmental	Open in IMG/M
3300031518	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20040719_148	Environmental	Open in IMG/M
3300031568	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050630_ee2	Environmental	Open in IMG/M
3300031767	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060913_OS-M1	Environmental	Open in IMG/M
3300031783	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090729_R4cd	Environmental	Open in IMG/M
3300031812	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST2-BottomLayer	Environmental	Open in IMG/M
3300031830	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MSe4	Environmental	Open in IMG/M
3300031865	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MSe3	Environmental	Open in IMG/M
3300031875	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MS13	Environmental	Open in IMG/M
3300031878	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS-M4	Environmental	Open in IMG/M
3300031948	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060911_MSe1	Environmental	Open in IMG/M
3300031950	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS65	Environmental	Open in IMG/M
3300031958	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST2-MatCore	Environmental	Open in IMG/M
3300031980	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS-M3	Environmental	Open in IMG/M
3300032033	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060913_OS-M2	Environmental	Open in IMG/M
3300032034	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060911_MSe2	Environmental	Open in IMG/M
3300032045	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS12-65	Environmental	Open in IMG/M
3300032057	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS60	Environmental	Open in IMG/M
3300032058	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS50	Environmental	Open in IMG/M
3300032356	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS50	Environmental	Open in IMG/M
3300033886	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090729_t10cd	Environmental	Open in IMG/M
3300034449	Metatranscriptome of hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050630_2000_MSt2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034647	Metatranscriptome of hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_0600_MSt7 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034648	Metatranscriptome of hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_1000_MSt9 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034649	Metatranscriptome of hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_1400_MSt11 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034650	Metatranscriptome of hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_1600_MSt12 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24186J35511_10319451	3300002510	Anoxygenic And Chlorotrophic Microbial Mat	LADAPEYGFKDALPDFVAGLCAFFGVASPVLGFVRLPVTLMVVGFVFWTAWKVFRSLS*
JGI24186J35511_10355841	3300002510	Anoxygenic And Chlorotrophic Microbial Mat	DAPEYGFRDALPDFVLGLCGFFGVASPVLGFVRLPVTLMVAGFVFWXAWRVFRSLS*
JGI24186J35511_10511931	3300002510	Anoxygenic And Chlorotrophic Microbial Mat	CDLPAPVLADAPEYGFRDAFPDFILGLCGFLGVASPVLGFVRLPVTLLVVGFVFWSAWRVFRSLS*
Ga0061020_10900661	3300003688	Anoxygenic And Chlorotrophic Microbial Mat	DAPEYGFKDALPDFVAGLCAFFGVASPVLGFVRLPVTLMVVGFVFWTAWKVFRSLS*
Ga0068639_1867691	3300005242	Anoxygenic And Chlorotrophic Microbial Mat	FKDALPDFVAGLCAFFGVASPVLGFVRLPVTLMVVGFVFWTGWRVFRSLS*
Ga0068640_1929901	3300005245	Anoxygenic And Chlorotrophic Microbial Mat	LADAPEYGFKDALPDFVAGLCGFFGIASPVLGFVRLPVTLLVVGFVFWSAWRVFRSLS*
Ga0068638_1886001	3300005246	Anoxygenic And Chlorotrophic Microbial Mat	VLADAPEYGFRDALPDFVAGLCNFFGIASPVLGFVRFPVTLMVVGFAFWTAWRVFRSLS*
Ga0068636_10040673	3300005248	Anoxygenic And Chlorotrophic Microbial Mat	FKDALPDFVAGLCDFFGIASPVLGFVRFPVTLMVVGFAFWTAWRVFRSLS*
Ga0068636_10075443	3300005248	Anoxygenic And Chlorotrophic Microbial Mat	DAPELHGFQDAFPAFVVGLCNFFGIASPVLGFVRLPVTLMVVGFVFWTGWRVFRSLS*
Ga0068636_10145711	3300005248	Anoxygenic And Chlorotrophic Microbial Mat	CDLPVPVLADAPEYGFKDALPDFVAGLCGFFGVASPVLGFVRLPVTLLVVGFVFWSAWRVFRSLS*
Ga0068636_10451566	3300005248	Anoxygenic And Chlorotrophic Microbial Mat	HGFQDAFPAFVVGLCNFFGIASPVLGFVRLPVTLTVIGFVFWSAWRVFRSLS*
Ga0068635_11798122	3300005250	Anoxygenic And Chlorotrophic Microbial Mat	RAVAPPASRICDLPVPVLADAPEYGFRDALPDFVAGLCGFFGVASPVLGFVRLPVTLMVIGFVFWTGWRVFRSLS*
Ga0068706_10565271	3300005452	Anoxygenic And Chlorotrophic	GRAVAPPASRICDLPVPVLADAPEYGFRDALPDFVAGLCGFFSVASPVLGFVRLPVTLMVIGFVFWTGWRVFRSLS*
Ga0068705_100894423	3300005453	Anoxygenic And Chlorotrophic	PAPVLADAPEYGFRDAFPDFILGLCGFLGVASPVLNFVRLPVTLMVVGFVFWTAWRVFRSLS*
Ga0068705_101280511	3300005453	Anoxygenic And Chlorotrophic	PVPVLADAPERYGMRDALPDFVAGLCSFFGIASPVLGFVRLPVTLMVIGFVFWSAWRVFRSLS*
Ga0068705_101509631	3300005453	Anoxygenic And Chlorotrophic	ADAPEYGFRDAFPDFILGLCGFLGVASPVLNFVRLPVTLMVVGFAFWTAWRVFRSLS*
Ga0068669_10510753	3300005638	Anoxygenic And Chlorotrophic Microbial Mat	APEYGFRDAFPDFILGLCGFLGVASPVLNFVRLPVTLMVIGFVFWSAWRVFRSLS*
Ga0068659_10115572	3300006363	Anoxygenic And Chlorotrophic Microbial Mat	ADAPEYGFRDAFPDFILGLCGFLGVASPVLNFVRLPVTLMVVGFVFWTAWRVFRSLS*
Ga0068659_11292041	3300006363	Anoxygenic And Chlorotrophic Microbial Mat	PVLADALELHGFQDAFPAFVVGLCNFFGIASPVLGFVRLPVTLTVIGFVFWSAWRVFRSLS*
Ga0102499_12440001	3300007000	Anoxygenic And Chlorotrophic Microbial Mat	PAPVLADAPEYGFRDAFPDFILGLCGFLGVASPVLNFVRLPVTLMVVGFVFWTGWRVFRSLS*
Ga0102499_13317512	3300007000	Anoxygenic And Chlorotrophic Microbial Mat	DALPDFVAGLCSFFGIASPVLGFVRLPVTLMVIGFAFWTGWRVFRSLS*
Ga0124934_10309912	3300010178	Anoxygenic And Chlorotrophic Microbial Mat	VLADAPEYGFRDAFPDFILGLCGFLGVASPVLNFVRLPVTLMVVGFVFWTAWRVFRSLS*
Ga0124917_10353602	3300010182	Anoxygenic And Chlorotrophic Microbial Mat	DAPELHGMRDAFPDFVLGLCNFFSIASPVLGFVRLPVTLMVVGFAFWTAWRVFRSLS*
Ga0124917_10980491	3300010182	Anoxygenic And Chlorotrophic Microbial Mat	PASRICDLPAPVLADAPELHGFQDAFPAFVVGLCNFFGIASPVLGFVRLPVTLMVIGFVFWTGWRVFRSLS*
Ga0124919_11097684	3300010183	Anoxygenic And Chlorotrophic Microbial Mat	ADAPEYGFKDALPDFVAGLCSFFGIASPVLGFVRLPVTLMVIGFVFWTGWRVFRSLS*
Ga0124920_10058625	3300010184	Anoxygenic And Chlorotrophic Microbial Mat	LADAPELHGMRDAFPDFVLGLCNFFSIASPVLGFVRFPVTLMVIGFAFWTAWRVFRSLS*
Ga0124920_10391692	3300010184	Anoxygenic And Chlorotrophic Microbial Mat	PPSARICDLPAPVLADAPELHGMRDAFPDFVAGLCAFFGVASPVLGFVRLPVTLMVVGFAFWTAWRVFRSLS*
Ga0124916_11097584	3300010186	Anoxygenic And Chlorotrophic Microbial Mat	DAPEYGFKDALPDFVAGLCNFFGIASPVLGFVRFPVTLMVVGFAFWTAWRVFRSLS*
Ga0124918_10026661	3300010187	Anoxygenic And Chlorotrophic Microbial Mat	APPAGRICDLPVPVLADAPEYGFRDAFPDFILGLCGFLGVASPVLGFVRLPVTLTVIGFVFWSAWRVFRSLS*
Ga0124918_10238942	3300010187	Anoxygenic And Chlorotrophic Microbial Mat	DLPVPVLADAPELHGMRDAFPDFVAGLCGFFGVASPVLGFVRFPVTLMVVGFVFWSAWRVFRSLS*
Ga0124918_10617283	3300010187	Anoxygenic And Chlorotrophic Microbial Mat	LADAPEYGFKDALPDFVAGLCGFFSVASPVLGIVRLPVTLMVVGFVFWTAWRVFRSLS*
Ga0124918_11587071	3300010187	Anoxygenic And Chlorotrophic Microbial Mat	PVLADAPEYGFRDAFPDFILGLCGFLGVASPVLNFVRLPVTLMVIGFVFWSAWRVFRSLS
Ga0124915_10244923	3300010189	Anoxygenic And Chlorotrophic Microbial Mat	PELHGFQDAFPAFVVGLCNFFGIASPVLGFVRLPVTLTVIGFVFWSAWRVFRSLS*
Ga0124915_10962383	3300010189	Anoxygenic And Chlorotrophic Microbial Mat	GMRDAFPDFVLGLCNFFSIASPVLGFVRLPVTLMVVGFAFWTAWRMFRSLS*
Ga0124915_11182073	3300010189	Anoxygenic And Chlorotrophic Microbial Mat	FRDALPDFVAGLCGFFSVASPVLGFVRLPVTLLVVGFVFWSAWRVFRSLS*
Ga0124914_11677162	3300010191	Anoxygenic And Chlorotrophic Microbial Mat	RAVAPPAGRICNLPAPVLADAPEYGFRDAFPDFILGLCGFLGVASPVLNFVRLPVTLMVIGFVFWSAWRVFRSLS*
Ga0124946_1375613	3300010245	Anoxygenic And Chlorotrophic Microbial Mat	GFRDVFPEFVSGLCVFFTVSAPVLDFVRFPVTLLVISFVFWTAWRVFRSLS*
Ga0124932_1501701	3300010246	Anoxygenic And Chlorotrophic Microbial Mat	CDLPAPVLADAPELHGMRDAFPDFVLGLCNFFSIASPVLGFVRFPVTLMVIGFAFWTAWRVFRSLS*
Ga0124938_11101141	3300010254	Anoxygenic And Chlorotrophic Microbial Mat	PEYGFRDAFPDFILGLCGFLGVASPVLNFVRLPVTLMVVGFVFWTGWRVFRSLS*
Ga0124913_12206783	3300010257	Anoxygenic And Chlorotrophic Microbial Mat	APEYGFRDAFPDFILGLCGFLGVASPVLGFVRLPVTLTVIGFVFWSAWRVFRSLS*
Ga0124913_12608171	3300010257	Anoxygenic And Chlorotrophic Microbial Mat	LPAPVLADAPEYGFRDAFPDFILGLCGFLGVASPVLNFVRLPVTLMVVGFVFWTAWRVFRSLS*
Ga0124912_10353852	3300010272	Anoxygenic And Chlorotrophic Microbial Mat	ADAPELHGMRDAFPDFVLGLCNFFSIASPVLGFVRFPVTLMVIGFAFWTAWRVFRSLS*
Ga0124912_13504393	3300010272	Anoxygenic And Chlorotrophic Microbial Mat	PTGRICDLPVPVLADAPEYGFKDALPDFVAGLCSFFGIASPVLGFVRLPVTLMVIGFVFWTGWRVFRSLS*
Ga0308395_10215941	3300031245	Hot Spring Phototrophic Mat	PAPVLADAPEYGFRDAFPDFILGLCGFLGVASPVLNFVRLPVTLMVIGFVFWTGWRVFRSLS
Ga0308395_10742341	3300031245	Hot Spring Phototrophic Mat	GFKDALPDFVAGLCGFFGVASPVLGFVRLPVTLMVVGFVFWTAWRVFRSLS
Ga0308395_11442502	3300031245	Hot Spring Phototrophic Mat	PVPVLADAPEYGFRDALPDFVLGLCGFFGVASPVLGFVRLPVTLMVVGFAFWTAWKVFRSLS
Ga0308394_10299294	3300031508	Hot Spring Phototrophic Mat	AGRICDLPAPVLADAPEYGFRDAFPDFILGLCGFLGVASPVLNFVRLPVTLMVIGFVFWSAWRVFRSLS
Ga0308394_10314681	3300031508	Hot Spring Phototrophic Mat	LPDFVAGLCGFFGVASPVLGFVRFPVTLMVVGFVFWSAWRVFRSLS
Ga0308394_10908283	3300031508	Hot Spring Phototrophic Mat	LADAPEYGFRDAFPDFILGLCGFLGVASPVLNFVRLPVTLMVVGLVFWTAWRVFRSLS
Ga0308397_10399871	3300031512	Hot Spring Phototrophic Mat	DAPEYGFRDAFPDFILGLCGFLGVASPVLNFVRLPVTLMVVGFVFWTAWRMFRSLS
Ga0308412_10402921	3300031513	Hot Spring Phototrophic Mat	ICDLPAPVLADAPELHGFQDAFPAFILGLCNFFLVASPVLGFVRLPVTLMVIGFVFWSAWRVFRSLS
Ga0308412_10952374	3300031513	Hot Spring Phototrophic Mat	ADAPELHGLRDAFPDFILGLCNFFLVASPVLGFVRLPVTLLVIGFVFWSAWRVFRSLS
Ga0308396_10503861	3300031515	Hot Spring Phototrophic Mat	AGRICDLPVPVLADAPEYGFKDALPDFVAGLCGFFSVASPVLGFVRLPVTLMVVGFVFWTAWRVFRSLS
Ga0308396_10735711	3300031515	Hot Spring Phototrophic Mat	AFPAFVVGLCNFFGIASPVLGFVRLPVTLTVIGFVFWSAWRVFRSLS
Ga0308398_10824011	3300031516	Hot Spring Phototrophic Mat	DAFPDFVLGLCNFFSIASPVLGFVRFPVTLMVIGFAFWTAWRVFRSLS
Ga0308398_11170621	3300031516	Hot Spring Phototrophic Mat	ADAPEYGFKDVLPDFVAGLCGFFGIASPVLGFVRLPVTLMVIGFVFWTGWRVFRSLS
Ga0308398_11202061	3300031516	Hot Spring Phototrophic Mat	VAPPAARICDLPAPVLADAPELHGMRDAFPDFVAGLCAFFGVASPVLGFVRLPVTLMVVGFAFWTAWRVFRSLS
Ga0308389_11301112	3300031518	Hot Spring Phototrophic Mat	YGFRDALPDFVAGLCGFFGVASPVLGFVRLPVTLMVVGFVFWSAWRVFRSLS
Ga0308393_10602381	3300031568	Hot Spring Phototrophic Mat	APEYGFRDALPDFVAGLCGFFGVASPVLGFVRLPVTLMVVGFAFWTGWRVFRSLS
Ga0308393_11097951	3300031568	Hot Spring Phototrophic Mat	YGFRDAFPDFILGLCGFLGVASPVLNFVRLPVTLMVVGFVFWSAWRVFRSLS
Ga0308393_11221492	3300031568	Hot Spring Phototrophic Mat	ADAPEYGFRDAFPDFILGLCGFLGVASPVLGFVRLPVTLTVIGFVFWSAWRVFRSLS
Ga0308401_10494893	3300031767	Hot Spring Phototrophic Mat	PAPVLADAPEYHGMRDAFPDFILGLCNFFLVASPVLGFVRLPATLMVVAFAFWTAWRVFRSLS
Ga0308418_10245691	3300031783	Hot Spring Phototrophic Mat	VAPPAGRICDLPAPVLADAPEYGFRDAFPDFILGLCGFLGVASPVLGFVRLPVTLLVVGFVFWSAWRVFRSLS
Ga0308418_10952331	3300031783	Hot Spring Phototrophic Mat	PVLADAPEYGFRDALPDFVAGLCGFFSVASPVLGFVRLPVTLMVVGFAFWTAWRVFRSLS
Ga0308418_11390431	3300031783	Hot Spring Phototrophic Mat	TGRICDLPVPVLADAPEYGFKDALPDFVAGLCGFFSVASPVLGFVRLPVTLMVIGFVFWTGWRVFRSLS
Ga0308411_100693551	3300031812	Hot Spring Phototrophic Mat	LPAPVLADAPERYGMRDAFPDFVLGLCNFFSIASPVLNFARLPVTLMVIGFVFWSAWRLFRSLS
Ga0308411_101083601	3300031812	Hot Spring Phototrophic Mat	AVAPPASRICDLPAPVLADAPEYGFRDAFPDFILGLCGFLGVASPVLGFVRLPVTLMVIGFVFWSAWRVFRSLS
Ga0308411_101270781	3300031812	Hot Spring Phototrophic Mat	EQHFRDALPDFVLGLCNFLSIASPVLGFVRLPVTLMVIGFVFWSAWRVFRSLS
Ga0308409_10710343	3300031830	Hot Spring Phototrophic Mat	PVLADAPEYGFRDAFPDFILGLCGFLGVASPVLGFVRLPVTLAVIGFVFWSAWRVFRSLS
Ga0308409_11126133	3300031830	Hot Spring Phototrophic Mat	DALPDFVAGLCSFFGIASPVLGFVRLPVTLMVIGFVFWTGWRVFRSLS
Ga0308409_11203592	3300031830	Hot Spring Phototrophic Mat	RICDLPVPVLADAPERYGMRDALPDFVAGLCGFFSVASPVLGFVRFPVTLMVVGFVFWSAWRVFRSLS
Ga0308408_10370411	3300031865	Hot Spring Phototrophic Mat	FPDFILGLCGFLGVASPVLNFVRLPVTLMVIGFVFWSAWRVFRSLS
Ga0308408_10579533	3300031865	Hot Spring Phototrophic Mat	GMRDAFPDFVLGLCHFFSVASPVLNFVRLPVTLMVIGFVFWSAWRVFRSLS
Ga0308408_11308261	3300031865	Hot Spring Phototrophic Mat	ICDLPAPVLADAPELHGMRDAFPDFVLGLCNFFSIASPVLGFVRFPVTLMVIGFAFWTAWRVFRSLS
Ga0308405_10096009	3300031875	Hot Spring Phototrophic Mat	ICDLPVPVLADAPEYGFKDALPDFVAGLCSFFGIASPVLGFVRLPVTLMVIGFVFWTGWRVFRSLS
Ga0308405_10300361	3300031875	Hot Spring Phototrophic Mat	DAFPDFVLGLCNFFSIASPVLGFVRLPVTLMVVGFAFWTAWRMFRSLS
Ga0308404_10152691	3300031878	Hot Spring Phototrophic Mat	YGFKDALPDFVAGLCSFFGVASPVLNFVRLPVTLMVVGFVFWTAWRVFRSLS
Ga0308404_10178491	3300031878	Hot Spring Phototrophic Mat	LADAPEYGFKDALPDFVAGLCGFFGVASPVLGFVRLPVTLMVVGFVFWTAWRVFRSLS
Ga0308406_10210295	3300031948	Hot Spring Phototrophic Mat	GFRDAFPDFILGLCGFLGVASPVLNFVRLPVTLMVVGFVFWTGWRVFRSLS
Ga0308417_11284823	3300031950	Hot Spring Phototrophic Mat	TGRICDLPVPVLADAPEYGFKDALPDFVAGLCGFFSVASPVLGFVRLPVTLMVVGFVFWTAWRVFRSLS
Ga0308417_11553491	3300031950	Hot Spring Phototrophic Mat	LPDFVAGLCAFFGVASPVLGFVRLPVTLMVVGFAFWTAWRVFRSLS
Ga0308417_11683251	3300031950	Hot Spring Phototrophic Mat	KDALPDFVAGLCAFFGVASPVLGFVRLPVTLMVVGFVFWTAWRVFRSLS
Ga0308417_12571352	3300031950	Hot Spring Phototrophic Mat	APPASRICDLPVPVLADAPEYGFRDALPDFVLGLCGFFGVASPVLGFVRLPVTLMVAGFVFWTAWKVFRSLS
Ga0308410_10720051	3300031958	Hot Spring Phototrophic Mat	VAPPAARICDLPAPVLADAPELHGMRDAFPDFVLGLCNFFLVASPVLGFVRLPVTLMVIGFVFWSAWRVFRSLS
Ga0308403_10135245	3300031980	Hot Spring Phototrophic Mat	ADAPEYGFRDALPDFVAGLCGFFSVASPVLGFVRLPVTLMVIGFVFWSAWRVFRSLS
Ga0308403_10537114	3300031980	Hot Spring Phototrophic Mat	ADAPEYGFKDALPDFVAGLCAFFGVASPVLGFVRLPVTLMVIGFVFWTGWRVFRSLS
Ga0308403_11114481	3300031980	Hot Spring Phototrophic Mat	APVLADAPEYHGMRDAFPDFILGLCNFFLVASPVLGFVRLPVTLLVVGFAFWTAWRVFRSLS
Ga0308402_10762973	3300032033	Hot Spring Phototrophic Mat	DAPEYGFKDALPDFVAGLCAFFGVASPVLGFVRLPVTLMVVGLAFWTAWRVFRSLS
Ga0308402_11046582	3300032033	Hot Spring Phototrophic Mat	RDAFPDFVAGLCAFFGVASPVLGFVRLPVTLMVVGFVFWTAWKVFRSLS
Ga0308407_10903861	3300032034	Hot Spring Phototrophic Mat	PTGRICDLPVPVLADAPEYGFKDALPDFVAGLCGFFSVASPVLGFVRLPVTLMVIGFVFWTGWRVFRSLS
Ga0308400_10291504	3300032045	Hot Spring Phototrophic Mat	LPDFVAGLCGFFSVASPVLGFVRLPVTLLVVGFVFWSAWRVFRSLS
Ga0308421_10282965	3300032057	Hot Spring Phototrophic Mat	ICDLPAPVLADAPEYGFRDAFPDFILGLCGFLGVASPVLNFVRLPVTLMVVGFVFWTAWKVFRSLS
Ga0308419_10924171	3300032058	Hot Spring Phototrophic Mat	VPVLADAPERYGMRDVFPDFVLGLCAFFGVASPVLNFVRLPVTLMVVGFVFWSAWRVFRSLS
Ga0308419_10927914	3300032058	Hot Spring Phototrophic Mat	RICDLPAPVLADAPEYGFRDAFPDFILGLCGFLGVASPVLNFVRLPVTLMVVGFVFWTAWRVFRSLS
Ga0308419_11216713	3300032058	Hot Spring Phototrophic Mat	YGFKDALPDFVAGLCGFFSVASPVLGFVRFPVTLMVVGFAFWTAWRVFRSLS
Ga0308419_11462231	3300032058	Hot Spring Phototrophic Mat	ICDLPVPVLADAPEYGFRDALPDFVLGLCGFFGVASPVLGFVRLPVTLMVIGFVFWTGWRVFRSLS
Ga0308419_11845951	3300032058	Hot Spring Phototrophic Mat	VLADAPEYGFRDALPDFVAGLCGFFSVASPVLGFVRFPVTLMVVGFVFWSAWRVFRSLS
Ga0308414_100387316	3300032356	Hot Spring Phototrophic Mat	ASRICDLPVPVLADAPEYGFKDALPDFVAGLCGFFSVASPVLNFVRLPVTLMVVGFVFWTGWRVFRSLS
Ga0308413_092166_614_769	3300033886	Hot Spring Phototrophic Mat	GFKDALPDFVAGLCSFFGIASPVLGFVRLPVTLMVIGFVFWTGWRVFRSLS
Ga0372963_24096_18_209	3300034449	Hot Spring Phototrophic Mat	LPVPVLADAPEYGFKDALPDFVAGLCGFFGIASPVLGFVRLPVTLMVIGFVFWTGWRVFRSLS
Ga0372968_039382_1_210	3300034647	Hot Spring Phototrophic Mat	TGRICDLPVPVLADAPEYGFRDAFPDFILGLCGFLGVASPVLGFVRLPVTLTVIGFVFWSAWRVFRSLS
Ga0372968_045801_1_168	3300034647	Hot Spring Phototrophic Mat	APEYGFRDAFPDFILGLCGFLGVASPVLNFVRLPVTLMVIGFVFWSAWRVFRSLS
Ga0372970_060366_330_518	3300034648	Hot Spring Phototrophic Mat	PVPVLADAPEYGFKDALPDFVAGLCAFFGVASPVLGFVRLPVTLMVVGFAFWTAWRVFRSLS
Ga0372972_034060_508_726	3300034649	Hot Spring Phototrophic Mat	APPASRICDLPVPVLADAPEYGFRDALPDFVLGLCGFFGVALPVLNFVRLPVTLMVVGFVFWTAWRVFRSLS
Ga0372972_038155_475_672	3300034649	Hot Spring Phototrophic Mat	CDLPVPVLADAPEYGFKDALPDFVAGLCSFFGIASPVLGFVRLPVTLMVVGFAFWTAWRVFRSLS
Ga0372972_050788_3_146	3300034649	Hot Spring Phototrophic Mat	AFPDFILGLCGFLGVASPVLGFVRLPVTLAVIGFVFWSAWRVFRSLS
Ga0372973_061307_36_188	3300034650	Hot Spring Phototrophic Mat	MRDAFPDFVLGLCNFFSIASPVLGFVRFPVTLMVIGFAFWTAWRVFRSLS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092120

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences