NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F092208

Metagenome Family F092208

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092208
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 44 residues
Representative Sequence MTYRTEQDKINRKEANQRYYKLEENKQQKRDYMKEYAKRDYVK
Number of Associated Samples 77
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 36.84 %
% of genes near scaffold ends (potentially truncated) 77.57 %
% of genes from short scaffolds (< 2000 bps) 85.05 %
Associated GOLD sequencing projects 63
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (41.121 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(54.206 % of family members)
Environment Ontology (ENVO) Unclassified
(93.458 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(90.654 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Mixed Signal Peptide: No Secondary Structure distribution: α-helix: 45.07%    β-sheet: 0.00%    Coil/Unstructured: 54.93%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF00856SET 58.88
PF01106NifU 8.41
PF137592OG-FeII_Oxy_5 2.80
PF04851ResIII 0.93
PF136402OG-FeII_Oxy_3 0.93
PF03592Terminase_2 0.93
PF13538UvrD_C_2 0.93
PF00961LAGLIDADG_1 0.93
PF03452Anp1 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0694Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domainPosttranslational modification, protein turnover, chaperones [O] 8.41
COG3728Phage terminase, small subunitMobilome: prophages, transposons [X] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms58.88 %
UnclassifiedrootN/A41.12 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001731|JGI24514J20073_1013161All Organisms → cellular organisms → Bacteria → Proteobacteria838Open in IMG/M
3300001743|JGI24515J20084_1008598Not Available930Open in IMG/M
3300002231|KVRMV2_100020744All Organisms → Viruses1790Open in IMG/M
3300002760|JGI25136J39404_1084348Not Available596Open in IMG/M
3300004461|Ga0066223_1485002All Organisms → Viruses597Open in IMG/M
3300006310|Ga0068471_1133284Not Available1674Open in IMG/M
3300006310|Ga0068471_1398114All Organisms → Viruses1353Open in IMG/M
3300006336|Ga0068502_1618802All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium555Open in IMG/M
3300006340|Ga0068503_10603292All Organisms → Viruses855Open in IMG/M
3300006340|Ga0068503_10642176Not Available794Open in IMG/M
3300006340|Ga0068503_10733314All Organisms → Viruses505Open in IMG/M
3300006340|Ga0068503_11083415All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium667Open in IMG/M
3300006736|Ga0098033_1053098All Organisms → Viruses1187Open in IMG/M
3300006750|Ga0098058_1124612All Organisms → Viruses688Open in IMG/M
3300006750|Ga0098058_1195643All Organisms → Viruses527Open in IMG/M
3300006751|Ga0098040_1194886All Organisms → Viruses593Open in IMG/M
3300006751|Ga0098040_1214478All Organisms → Viruses561Open in IMG/M
3300006754|Ga0098044_1224706All Organisms → Viruses733Open in IMG/M
3300006789|Ga0098054_1212498All Organisms → Viruses703Open in IMG/M
3300006789|Ga0098054_1321133Not Available552Open in IMG/M
3300006793|Ga0098055_1411654All Organisms → Viruses500Open in IMG/M
3300006902|Ga0066372_10297002Not Available912Open in IMG/M
3300006924|Ga0098051_1178606Not Available557Open in IMG/M
3300007963|Ga0110931_1223583Not Available561Open in IMG/M
3300008050|Ga0098052_1084385All Organisms → Viruses1313Open in IMG/M
3300008050|Ga0098052_1160264All Organisms → Viruses888Open in IMG/M
3300008216|Ga0114898_1006845Not Available4803Open in IMG/M
3300008216|Ga0114898_1150378Not Available671Open in IMG/M
3300008218|Ga0114904_1046538Not Available1147Open in IMG/M
3300008219|Ga0114905_1058964All Organisms → Viruses1396Open in IMG/M
3300008220|Ga0114910_1092944Not Available905Open in IMG/M
3300009173|Ga0114996_10724723All Organisms → Viruses726Open in IMG/M
3300009173|Ga0114996_11302970All Organisms → Viruses505Open in IMG/M
3300009370|Ga0118716_1174639All Organisms → Viruses1042Open in IMG/M
3300009412|Ga0114903_1090544All Organisms → Viruses682Open in IMG/M
3300009413|Ga0114902_1127893All Organisms → Viruses660Open in IMG/M
3300009418|Ga0114908_1095247All Organisms → Viruses1001Open in IMG/M
3300009418|Ga0114908_1178344Not Available669Open in IMG/M
3300009425|Ga0114997_10271209Not Available948Open in IMG/M
3300009603|Ga0114911_1046824All Organisms → Viruses → Predicted Viral1353Open in IMG/M
3300009605|Ga0114906_1259494All Organisms → Viruses563Open in IMG/M
3300009619|Ga0105236_1065577All Organisms → Viruses502Open in IMG/M
3300009620|Ga0114912_1036546All Organisms → Viruses1301Open in IMG/M
3300009620|Ga0114912_1152135All Organisms → Viruses540Open in IMG/M
3300009622|Ga0105173_1099418All Organisms → Viruses533Open in IMG/M
3300009706|Ga0115002_10612086All Organisms → cellular organisms → Bacteria → Proteobacteria778Open in IMG/M
3300009786|Ga0114999_10974235All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium615Open in IMG/M
3300010151|Ga0098061_1302378All Organisms → Viruses550Open in IMG/M
3300010151|Ga0098061_1343369All Organisms → Viruses508Open in IMG/M
3300010883|Ga0133547_10219048Not Available4031Open in IMG/M
3300010883|Ga0133547_11264136All Organisms → cellular organisms → Bacteria1404Open in IMG/M
3300017731|Ga0181416_1071695Not Available819Open in IMG/M
3300017767|Ga0181406_1214023Not Available570Open in IMG/M
3300017772|Ga0181430_1054265Not Available1240Open in IMG/M
3300017775|Ga0181432_1118278All Organisms → Viruses799Open in IMG/M
3300017775|Ga0181432_1210265All Organisms → Viruses610Open in IMG/M
3300020447|Ga0211691_10402660Not Available552Open in IMG/M
3300025042|Ga0207889_1017498Not Available666Open in IMG/M
3300025045|Ga0207901_1033942Not Available689Open in IMG/M
3300025045|Ga0207901_1046970All Organisms → Viruses573Open in IMG/M
3300025046|Ga0207902_1021160Not Available765Open in IMG/M
3300025049|Ga0207898_1002680All Organisms → cellular organisms → Bacteria → FCB group1979Open in IMG/M
3300025050|Ga0207892_1011503All Organisms → Viruses937Open in IMG/M
3300025050|Ga0207892_1031249All Organisms → Viruses613Open in IMG/M
3300025052|Ga0207906_1022942All Organisms → Viruses866Open in IMG/M
3300025052|Ga0207906_1056685All Organisms → Viruses519Open in IMG/M
3300025069|Ga0207887_1043222All Organisms → Viruses732Open in IMG/M
3300025069|Ga0207887_1087255All Organisms → Viruses507Open in IMG/M
3300025078|Ga0208668_1022555All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium1267Open in IMG/M
3300025085|Ga0208792_1052211All Organisms → Viruses765Open in IMG/M
3300025103|Ga0208013_1125874All Organisms → Viruses628Open in IMG/M
3300025108|Ga0208793_1156184Not Available599Open in IMG/M
3300025109|Ga0208553_1038586Not Available1208Open in IMG/M
3300025112|Ga0209349_1173355Not Available566Open in IMG/M
3300025114|Ga0208433_1170080All Organisms → Viruses501Open in IMG/M
3300025118|Ga0208790_1108602All Organisms → Viruses800Open in IMG/M
3300025125|Ga0209644_1032294Not Available1170Open in IMG/M
3300025125|Ga0209644_1062008Not Available864Open in IMG/M
3300025133|Ga0208299_1041675All Organisms → Viruses1816Open in IMG/M
3300025251|Ga0208182_1047391All Organisms → Viruses904Open in IMG/M
3300025280|Ga0208449_1062712All Organisms → Viruses960Open in IMG/M
3300025293|Ga0208934_1070551All Organisms → Viruses614Open in IMG/M
3300025300|Ga0208181_1074136All Organisms → Viruses671Open in IMG/M
3300025305|Ga0208684_1077704All Organisms → Viruses860Open in IMG/M
3300025873|Ga0209757_10009805All Organisms → Viruses2532Open in IMG/M
3300025873|Ga0209757_10210984All Organisms → Viruses615Open in IMG/M
3300027813|Ga0209090_10209842All Organisms → cellular organisms → Bacteria1000Open in IMG/M
3300027838|Ga0209089_10680933All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300027844|Ga0209501_10359911All Organisms → Viruses874Open in IMG/M
(restricted) 3300027856|Ga0255054_10561837Not Available552Open in IMG/M
(restricted) 3300027868|Ga0255053_10206333Not Available947Open in IMG/M
3300031801|Ga0310121_10148997Not Available1459Open in IMG/M
3300031811|Ga0310125_10033754All Organisms → cellular organisms → Bacteria2730Open in IMG/M
3300032278|Ga0310345_11407328Not Available682Open in IMG/M
3300032278|Ga0310345_11647553Not Available627Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine54.21%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean19.63%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine6.54%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater5.61%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.87%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.87%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic1.87%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.87%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.93%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.93%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.93%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater0.93%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids0.93%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.93%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001731Marine viral communities from the Pacific Ocean - LP-37EnvironmentalOpen in IMG/M
3300001743Marine viral communities from the Pacific Ocean - LP-38EnvironmentalOpen in IMG/M
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300004461Marine viral communities from Newfoundland, Canada BC-2EnvironmentalOpen in IMG/M
3300006310Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500mEnvironmentalOpen in IMG/M
3300006336Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500mEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006902Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_AEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009370Combined Assembly of Gp0127930, Gp0127931EnvironmentalOpen in IMG/M
3300009412Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2EnvironmentalOpen in IMG/M
3300009413Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009603Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009619Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250EnvironmentalOpen in IMG/M
3300009620Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300009706Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300017772Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10EnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300020447Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556090-ERR599159)EnvironmentalOpen in IMG/M
3300021791Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmerEnvironmentalOpen in IMG/M
3300025042Marine viral communities from the Pacific Ocean - LP-47 (SPAdes)EnvironmentalOpen in IMG/M
3300025045Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)EnvironmentalOpen in IMG/M
3300025046Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)EnvironmentalOpen in IMG/M
3300025049Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)EnvironmentalOpen in IMG/M
3300025050Marine viral communities from the Pacific Ocean - LP-54 (SPAdes)EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025069Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)EnvironmentalOpen in IMG/M
3300025078Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025085Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025109Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025114Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025251Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)EnvironmentalOpen in IMG/M
3300025270Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)EnvironmentalOpen in IMG/M
3300025280Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)EnvironmentalOpen in IMG/M
3300025293Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2 (SPAdes)EnvironmentalOpen in IMG/M
3300025300Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 (SPAdes)EnvironmentalOpen in IMG/M
3300025305Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300027813Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)EnvironmentalOpen in IMG/M
3300027838Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)EnvironmentalOpen in IMG/M
3300027844Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)EnvironmentalOpen in IMG/M
3300027856 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_23EnvironmentalOpen in IMG/M
3300027868 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_22EnvironmentalOpen in IMG/M
3300031801Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986EnvironmentalOpen in IMG/M
3300031811Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300034654Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI24514J20073_101316133300001731MarineMRTAQDIINRKEANQRYYKLEENKEQKRNYMRKYNTRSK
JGI24515J20084_100859843300001743MarineMRTEQDKINRREANRRYYNLEENKEQKREYMRKYNKRTHK
KVRMV2_10002074413300002231Marine SedimentMAYRTEQDKINRREANQRYYRLEENKQQKRDYMKEYAKRDY
JGI25136J39404_101317623300002760MarineMRTEQDTINRKEANQRYYRLQENQEQKRNYMNDYRKRPYVREKYLATLKKR*
JGI25136J39404_101417913300002760MarineMRAQQDIINRKEANQRYYRLQENQEQKRNYMNDYRKRPYVREKYLAKLKKR*
JGI25136J39404_108434823300002760MarineMRTEQDKLNRREANQRYYKLEENKEQKRNYMETYRLRPYVQAKLKKEDK*
Ga0066223_148500233300004461MarineMRTPQDIINRKEANQRYYKLEENKEQKRKYMKAYRERPYVK
Ga0068471_113328413300006310MarineMRTEQDKINRKEANQRYYQLEENKQQKRDYMKTYSKRPYVMAKNHERYLRSKI
Ga0068471_139811463300006310MarineMRTPQDIINRKEANRRYYELEENKEQKRNYMKTYRTRDYVK
Ga0068502_161880223300006336MarineMRTPQDIINRKEANQRYYKLEENKQQKRDYMKAYR
Ga0068503_1060329223300006340MarineMRTEQDKINRKEANQRYYKLEENKEQKRNYMKAYRERPYVKAKLHE*
Ga0068503_1064217653300006340MarineVNRTEQDKINRKEANRRYYQLEEHKQQKRDYMKEYAKRDYVKIKNH
Ga0068503_1073331423300006340MarineMRTAQDIINRKEANQRYYKLEENKEQKRNYMKAYRERPYVKAK
Ga0068503_1108341513300006340MarineMRTEQDKINRKEANQRYYKLEENKEQKRNYMKAYRERPYVIAKLHE*
Ga0098033_105309813300006736MarineMRTEQDKINRREANRRYYKLEENKQQKRDYMKAYAKR
Ga0098058_112461233300006750MarineMTYRTKQDKINRKEANRRYYKLEENKQQKRDYMKAYA
Ga0098058_119564313300006750MarineMTYRTEQDKINRKEANQRYYRLEENKQQKRDYMKEYSK
Ga0098040_119488613300006751MarineMMYRTEQDKINRREANQRYYRLEENKQQKRDYMKEY
Ga0098040_121447813300006751MarineMTYRTEQDKINRKEANQRYYKLEENKQQKRDYMKEYSK
Ga0098044_122470633300006754MarineMRTEQDLINRKEANQRYYKLEENKEQKRNYMNEYR
Ga0098054_121249833300006789MarineMRTEQDKINRREANRRYYKLEENKQQKRDYMKAYAKRDYV
Ga0098054_132113313300006789MarineMRTEQDKINRREANRRYYKLEENKQQKRDYMKEYSKRDYVVA
Ga0098055_141165423300006793MarineMTCRTEQDKINRKEANRRYYQLEENKQQKRDYMKEYAKRDYVK
Ga0066372_1029700263300006902MarineVNRTEQDKINRKEANRRYYQLEENKQQKRDYMKEYVKRDYVIAKRKKIPAT
Ga0098051_117860633300006924MarineVNRTEQDKINRKEANQRYYQLEENKQQKRDYMKAYSKRPYVMAKNHERYL
Ga0110931_122358333300007963MarineMRTEQDKKNRKAANQRYYNLEENKQQKRDYMKSYRTRDYVKAKSHEYY
Ga0098052_108438513300008050MarineMAYRTEQDKINRKEANQRYYRLEENKQQKRDYMKEYQKRD
Ga0098052_116026443300008050MarineMTYRTKQDKINRKEANRRYYKLEENKQQKRDYMKAY
Ga0114898_100684573300008216Deep OceanMRTEQDIINRKEANKRYYRLQENQEQKRNYMTEYRKRPYVREKYEAKLKRNYAR*
Ga0114898_115037833300008216Deep OceanMVFRTEQDKINRRAANRRYYSLEENKEQKREYMRKY
Ga0114904_104653813300008218Deep OceanMRTEQDKINRKEANQRYYKLEENKQQKRDYMKSYYTRDYVKVKAHEYY
Ga0114904_114046533300008218Deep OceanMRTPQDIINRREANQRYYKLEENKEQKRNYMKAYYRRKKIQKANNDLL
Ga0114905_105896453300008219Deep OceanMTYRTEQDKINRKEANQRYYRLEENKQQKRDYMKEYNKRSY
Ga0114910_109294413300008220Deep OceanMAVQRTKQDMINRREANRRYYKLEENKEAKRAYQRKYTLR
Ga0114996_1072472313300009173MarineMRTKQDTINRKEANQKYYKLEENKEQKRNYMKAYRE
Ga0114996_1130297033300009173MarineMRTEQDKINRKEANQRYYKLEENKEQKRNYMKAYRERPYVKAKYHEY
Ga0118716_117463913300009370MarineMTYRTEQDKINRKEANQRYYKLEENKQQKRDYMKEYQKRDYVKVRAHE
Ga0114903_109054433300009412Deep OceanMTYRTEQDKINRKEANQRYYKLEENKQQKRDYMKAYAKRDYVKARAHD
Ga0114902_112789333300009413Deep OceanMTYRTEQDKINRREANRRYYSLEENKEQKREYMRK
Ga0114908_109524743300009418Deep OceanMTYRTEQDKINRREANRRYYSLEENKEQKREYMRKYNKRTHKTSYP
Ga0114908_117834413300009418Deep OceanMRTEQDKINRKEANQRYYKLEENKQQKRDYMKSYYTRDYVKAKAHEYY
Ga0114997_1027120943300009425MarineMTHRTEQDKINRKEANQRYYKLEENKEQRRIKSRSYSKRDYVKAKAHEY
Ga0114932_1091980523300009481Deep SubsurfaceMPYRTEQDKINRKEANQRYYELEENKQQKRDYMKEYAKRDYVKAKAREYYINNKLKWGGKRQ
Ga0114911_104682413300009603Deep OceanMAVQRTKQDMINRREANRRYYKLEENKEAKRAYQRK
Ga0114906_125949433300009605Deep OceanMTYRTEQDKINRKEANQRYYKLEENKQQKRDYMKEYAKRDYVK
Ga0105236_106557733300009619Marine OceanicMTYRTEQDKINRKEANQRYYKLEENKQQKRDYMKEYAK
Ga0114912_103654613300009620Deep OceanMTYRTEQDKINRREANRRYYSLEENKEQKREYMRKYNKRTHKTSY
Ga0114912_115213513300009620Deep OceanMRTPQDIINRKEANQRYYKREENKQHKRDYMKEDSKRE
Ga0105173_109941813300009622Marine OceanicMRTSQDIINRKEANQKYYKLEENKEQKRNYMKAYRERPY
Ga0115002_1061208613300009706MarineMRTEQDIINRKEANQKYYKLEENKQQKRNYMKTYRT
Ga0114999_1097423523300009786MarineVRTTQDIINRKEANQRYYKLEENKETRCSYQRKYDSCQRG
Ga0098061_130237813300010151MarineMYRTEQDKINRREANQRYYRLEENKQQKRDYMKEYAKRDYVKVK
Ga0098061_134336913300010151MarineMTYRTEQDKINRKEANQRYYKLEENKQQKRDYMKTYSKRDYVRAKAH
Ga0133547_1021904893300010883MarineMYRTEQDKINRKEANQRYYKLEENKEQKRNYMKTYRTRNYVK
Ga0133547_1126413643300010883MarineMTYRTPQDIINRKEANQRYYKLEENKEQKRNYMKNYAKRADVKAKSHEYYIVNK
Ga0181416_107169513300017731SeawaterVRTPQDIINRKEANQRYYKLEENKEQKRNYMKTYRTRDYVKAKS
Ga0181406_121402323300017767SeawaterVRTPQDIINRKEANQRYYKLEENKEQKREYMKAYRARDYVKAKSHEYYIMNK
Ga0181430_105426513300017772SeawaterVRTPQDIINRKEANQRYYKLEENKEQKRNYMKTYRTRDYVKAK
Ga0181432_111827833300017775SeawaterMTYRTEQDKINRKEANQRYYILEENKQQKRDYMKEYSKRDYVKAK
Ga0181432_121026533300017775SeawaterMRTEQDKINRKEANQRYYKLEENKEQKRNYMKAYRERPYVKAKLHEY
Ga0181432_128395623300017775SeawaterMRTEQDKINRKEANQRYYKLEENKQQKRDYMKAYRERPYVKAKYHEYYIINKMRWGGI
Ga0211691_1040266013300020447MarineVRTPEDIVNRKEANQRYYKLEENKQQKRDYMKTYRTRDYVK
Ga0226832_1020681633300021791Hydrothermal Vent FluidsMRTEQDIINRKEANKRYYRLQENQEQKRNYMTEYRKRPYVREKYEAKLKRNY
Ga0207889_101749813300025042MarineMRTEQDKLNRREANQRYYKLEENKEQKRNYMETYRLRPYVQAKLKKEDK
Ga0207901_103394233300025045MarineMTYRTEQDIINRKEANQRYYKLEENKEQKRNYMKAYRLRPYVEAKLKGARK
Ga0207901_104697013300025045MarineMRTEEDKINRKEANQRYYKLEENKEQKRNYMKTYRER
Ga0207902_102116023300025046MarineMRTEQDKLNRREANQRYYKLEENKEQKRNYMKTYRLRPYVQGKLKKEAI
Ga0207898_100268013300025049MarineMTYRTEQDIINRKEANQRYYKLEENKEQKRNYMKAY
Ga0207892_101150343300025050MarineMRTEQDKINRKEANQKYYKLEENKEQKRNYMKAYR
Ga0207892_102351633300025050MarineMRAPQDIINRKEANQRYYRLQENQEQKRNYMNDYRKRPYVREKYLAKLK
Ga0207892_103124913300025050MarineMRTGQDKINRKEANQRYYKLEENKEQKRNYMKAYR
Ga0207906_102294233300025052MarineMRTEQDKINRKEANQRYYKLEENKEQKRNYMKAYRLRPYVEAKLKGARK
Ga0207906_105668513300025052MarineMTYRTEQDIINRKEANQRYYKLEENKEQKRNYMKAYRTRPYVKAKLHEYYIVNK
Ga0207887_104322233300025069MarineMRTPQDIINRKEANQRYYKLKENKEQKRNYMKAYRERPY
Ga0207887_108725513300025069MarineMRTEQDKINRKGANQRYYKLEENKEQKRNYMKTYRERPYVKAKLH
Ga0208668_102255513300025078MarineMRTEQDKINRKEANQRYYQLEENKQQKRDYMKAYSKRPYVMAKNHERY
Ga0208792_105221113300025085MarineMTYRTEQDKINRKEANQRYYKLEENKQQKRDYMKEY
Ga0208013_112587433300025103MarineMMYRTEQDKINRREANQRYYRLEENKQQKRDYMKEYAKRDYVKAKAH
Ga0208793_115618443300025108MarineVNRTEQDKINRKEANQRYYQLEENKQQKRDYMKAYSKRPYVMAKNHERYLRSKI
Ga0208553_103858663300025109MarineMRTEQDKINRKEANRRYYQLEENKQQKRDYMKTYSKRPYVMAKNHERYLRS
Ga0209349_117335513300025112MarineVNRTEQDKINRKEANQRYYQLEENKQQKRDYMKTYSKRPYV
Ga0208433_117008013300025114MarineMTYRTEQDKINRKEANQRYYKLEENKQQKRDYMKEYNKRPHVMAKR
Ga0208790_110860243300025118MarineMMYRTEQDKINRREANQRYYRLEENKQQKRDYMKEYAKR
Ga0209644_103229413300025125MarineMRAQQDIINRKEANQRYYRLQENQEQKRNYMNDYRKRPYVREKYLAKLKKR
Ga0209644_106200853300025125MarineVRTEQDKINRKKANQRYYQLEENKQQKRDYMKEYTKRDTVKARAHNYYINNKLKWG
Ga0208299_104167513300025133MarineMTYRTEQDKINRKEANQRYYRLEENKQQKRDYMKDYNKRSYVMAKRH
Ga0208182_100974753300025251Deep OceanMRTEQDIINRKEANKRYYRLQENQEQKRNYMTEYRKRPYVREKYEAKLKRNYAR
Ga0208182_104739143300025251Deep OceanMTYRTEQDKINRKEANQRYYKLEENKQQKRDYMKEYSKRDYVKV
Ga0208813_108570613300025270Deep OceanMRTPQDIINRREANQRYYKLEENKEQKRNYMKAYYRRKKIQKANNDLLNAE
Ga0208449_106271213300025280Deep OceanMTYRTEQDKINRREANRRYYSLEENKEQKREYMRKY
Ga0208934_107055133300025293Deep OceanMPYRTEQDKINRREANQRYYKLEENKQQKRDYMKEYAKRDYVK
Ga0208181_107413633300025300Deep OceanMRTPQDIINRKEANQRYYKLEENKEQKRNYMKTYRKRKMQEVN
Ga0208684_107770443300025305Deep OceanMRTPQDIINRKEANQRYYKLEENKQQKRDYMKEYSKREYV
Ga0209757_1000980573300025873MarineMRTEQDVINRKEANQRYYRLQENQEQKRNYMNDYRKRPYVREKYLANLKKR
Ga0209757_1003941933300025873MarineDIINRKEANQRYYRLQENQEQKRNYMNDYRKRPYVREKYLANLKKR
Ga0209757_1009396223300025873MarineMRTEQDLINRKEANQRYYKLEENKEHKKNYMTEYRKRPYVRGKYEAKLKRNYAR
Ga0209757_1021098423300025873MarineMRTEQDKLNRKEANQRYYKLEENKQQKRDYMKEYS
Ga0209090_1020984213300027813MarineMTVQRTKQDIINRREANRRYYKLEENRETKRSYQRKYSLG
Ga0209089_1068093323300027838MarineMNRTEQDKINRKEANQRYYKLEENKEQRRNYMKNYAK
Ga0209501_1035991143300027844MarineMRTEQDKINRKEANQRYYKLEENKEQRRNYSKAYSKRDDVKAKAHEYYI
(restricted) Ga0255054_1056183713300027856SeawaterMSINRTKQDLINRKEANQRYYKLEENKEQKRNYMKTY
(restricted) Ga0255053_1020633343300027868SeawaterMSINRTKQDLINRKEANQRYYKLEENKEQKRNYMKTYRTRDYVKA
Ga0310121_1014899723300031801MarineMRTEQDKLNRSEANQRYYKLEENKEQKRNYMKTYRLRPYVQAKLKKEVK
Ga0310125_1003375413300031811MarineMRTEQDKLNRSEANQRYYKLEENKEQKRNYMKTYRLRPYVQTKLKKEVK
Ga0310345_1140732813300032278SeawaterMRTEQDKINRKEANQRYYQLEENKQQKRDYMKTYSKRPYVMTKNHERYLRSKIQ
Ga0310345_1164755313300032278SeawaterVNRTEQDKINRKEANQRYYQLEENKEQKRKYMKEYSK
Ga0326741_005057_1450_16323300034654Filtered SeawaterMTCLYSKDFVRRTEQDLINRKEANKRYYRLQENQEQKRNYMNDYRKRPYVREKYLANLKK


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