NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F092236

Metagenome / Metatranscriptome Family F092236

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F092236
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 98 residues
Representative Sequence VFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRAGPARAG
Number of Associated Samples 96
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 57.55 %
% of genes near scaffold ends (potentially truncated) 34.58 %
% of genes from short scaffolds (< 2000 bps) 76.64 %
Associated GOLD sequencing projects 87
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (51.402 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(11.215 % of family members)
Environment Ontology (ENVO) Unclassified
(41.121 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(61.682 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 72.55%    β-sheet: 0.00%    Coil/Unstructured: 27.45%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF00294PfkB 49.53
PF00459Inositol_P 14.02
PF00478IMPDH 8.41
PF00215OMPdecase 3.74
PF01636APH 0.93



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms51.40 %
UnclassifiedrootN/A48.60 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003990|Ga0055455_10141702All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300004006|Ga0055453_10073495All Organisms → cellular organisms → Bacteria973Open in IMG/M
3300004479|Ga0062595_100247299All Organisms → cellular organisms → Bacteria1153Open in IMG/M
3300004480|Ga0062592_100600334All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales935Open in IMG/M
3300005329|Ga0070683_101375173All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica678Open in IMG/M
3300005334|Ga0068869_100668011Not Available883Open in IMG/M
3300005337|Ga0070682_101406875All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia596Open in IMG/M
3300005338|Ga0068868_100018053All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5265Open in IMG/M
3300005339|Ga0070660_100087198All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2457Open in IMG/M
3300005341|Ga0070691_10489980All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria709Open in IMG/M
3300005355|Ga0070671_100567932All Organisms → cellular organisms → Bacteria979Open in IMG/M
3300005365|Ga0070688_100063228All Organisms → cellular organisms → Bacteria2345Open in IMG/M
3300005367|Ga0070667_100306315Not Available1431Open in IMG/M
3300005441|Ga0070700_100068367All Organisms → cellular organisms → Bacteria2259Open in IMG/M
3300005458|Ga0070681_10422033All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1246Open in IMG/M
3300005467|Ga0070706_100621194All Organisms → cellular organisms → Bacteria1004Open in IMG/M
3300005543|Ga0070672_101876526Not Available539Open in IMG/M
3300005544|Ga0070686_100019435All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia4003Open in IMG/M
3300005547|Ga0070693_100241314All Organisms → cellular organisms → Bacteria1193Open in IMG/M
3300005614|Ga0068856_102644672Not Available507Open in IMG/M
3300005615|Ga0070702_100062289All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei2175Open in IMG/M
3300005617|Ga0068859_100822199All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1016Open in IMG/M
3300005834|Ga0068851_10026671All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2842Open in IMG/M
3300005874|Ga0075288_1031830All Organisms → cellular organisms → Bacteria → Terrabacteria group779Open in IMG/M
3300005887|Ga0075292_1037291All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria681Open in IMG/M
3300005888|Ga0075289_1003222All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2052Open in IMG/M
3300005888|Ga0075289_1031811Not Available787Open in IMG/M
3300006031|Ga0066651_10617305All Organisms → cellular organisms → Bacteria → Terrabacteria group577Open in IMG/M
3300006237|Ga0097621_102054075All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300006572|Ga0074051_10017051Not Available806Open in IMG/M
3300006576|Ga0074047_10002625Not Available1276Open in IMG/M
3300006806|Ga0079220_11689312Not Available553Open in IMG/M
3300006854|Ga0075425_100231555All Organisms → cellular organisms → Bacteria2125Open in IMG/M
3300006914|Ga0075436_100141498All Organisms → cellular organisms → Bacteria1691Open in IMG/M
3300009094|Ga0111539_10426791Not Available1544Open in IMG/M
3300009098|Ga0105245_12340804Not Available588Open in IMG/M
3300009148|Ga0105243_11313433All Organisms → cellular organisms → Bacteria → Terrabacteria group741Open in IMG/M
3300009162|Ga0075423_10243230Not Available1885Open in IMG/M
3300009174|Ga0105241_10092097All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2393Open in IMG/M
3300009176|Ga0105242_10549661Not Available1107Open in IMG/M
3300009176|Ga0105242_11123503Not Available801Open in IMG/M
3300009177|Ga0105248_10340465All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1689Open in IMG/M
3300009553|Ga0105249_10254420All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1742Open in IMG/M
3300010371|Ga0134125_10292921All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1807Open in IMG/M
3300010400|Ga0134122_10974939Not Available828Open in IMG/M
3300011106|Ga0151489_1354682Not Available628Open in IMG/M
3300011106|Ga0151489_1356051Not Available592Open in IMG/M
3300011107|Ga0151490_1027695Not Available714Open in IMG/M
3300012198|Ga0137364_10693779All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria768Open in IMG/M
3300012911|Ga0157301_10121186Not Available797Open in IMG/M
3300012951|Ga0164300_10220890Not Available942Open in IMG/M
3300012955|Ga0164298_10043444Not Available2112Open in IMG/M
3300012961|Ga0164302_10387964Not Available948Open in IMG/M
3300012986|Ga0164304_11364876Not Available580Open in IMG/M
3300012989|Ga0164305_10042377All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2600Open in IMG/M
3300012989|Ga0164305_10427717All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1022Open in IMG/M
3300012989|Ga0164305_11146571Not Available670Open in IMG/M
3300013105|Ga0157369_10144151All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2519Open in IMG/M
3300013308|Ga0157375_10212162All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei2094Open in IMG/M
3300014497|Ga0182008_10085928All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1549Open in IMG/M
3300015261|Ga0182006_1221496Not Available623Open in IMG/M
3300015371|Ga0132258_10984205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2131Open in IMG/M
3300015371|Ga0132258_11456039All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1730Open in IMG/M
3300015371|Ga0132258_13093658Not Available1150Open in IMG/M
3300015371|Ga0132258_13715493All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1041Open in IMG/M
3300015372|Ga0132256_100212537All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1986Open in IMG/M
3300015372|Ga0132256_102850482Not Available581Open in IMG/M
3300015373|Ga0132257_100160440All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia2641Open in IMG/M
3300015373|Ga0132257_100183202All Organisms → cellular organisms → Bacteria2472Open in IMG/M
3300015374|Ga0132255_103477512Not Available670Open in IMG/M
3300022756|Ga0222622_11193005Not Available560Open in IMG/M
3300025556|Ga0210120_1041809Not Available893Open in IMG/M
3300025899|Ga0207642_10892164Not Available569Open in IMG/M
3300025901|Ga0207688_10165585Not Available1312Open in IMG/M
3300025914|Ga0207671_10858016Not Available719Open in IMG/M
3300025921|Ga0207652_10385759Not Available1264Open in IMG/M
3300025924|Ga0207694_10104897All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei2243Open in IMG/M
3300025926|Ga0207659_10582796Not Available953Open in IMG/M
3300025932|Ga0207690_10344955Not Available1176Open in IMG/M
3300025934|Ga0207686_10062565All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium2363Open in IMG/M
3300025935|Ga0207709_11674416Not Available529Open in IMG/M
3300025936|Ga0207670_11777696Not Available524Open in IMG/M
3300025942|Ga0207689_10293260Not Available1347Open in IMG/M
3300025949|Ga0207667_10383826Not Available1431Open in IMG/M
3300025981|Ga0207640_10061317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia2491Open in IMG/M
3300026023|Ga0207677_10646043Not Available933Open in IMG/M
3300026025|Ga0208778_1012610All Organisms → cellular organisms → Bacteria → Terrabacteria group803Open in IMG/M
3300026035|Ga0207703_12135990Not Available536Open in IMG/M
3300026041|Ga0207639_10197554Not Available1723Open in IMG/M
3300026075|Ga0207708_10065837Not Available2770Open in IMG/M
3300026078|Ga0207702_10319520All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1478Open in IMG/M
3300026089|Ga0207648_10082528All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia2803Open in IMG/M
3300026118|Ga0207675_102245277Not Available560Open in IMG/M
3300027560|Ga0207981_1003872All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2644Open in IMG/M
3300028379|Ga0268266_11122568Not Available761Open in IMG/M
3300028589|Ga0247818_10568857Not Available777Open in IMG/M
3300028589|Ga0247818_10782858Not Available665Open in IMG/M
3300028722|Ga0307319_10068704All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1121Open in IMG/M
3300028807|Ga0307305_10428849Not Available596Open in IMG/M
3300028878|Ga0307278_10549339All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300028884|Ga0307308_10398144Not Available660Open in IMG/M
3300031938|Ga0308175_100053313All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3510Open in IMG/M
3300031996|Ga0308176_12269530Not Available579Open in IMG/M
3300033433|Ga0326726_10265825All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1601Open in IMG/M
3300033551|Ga0247830_11235026All Organisms → cellular organisms → Bacteria → Terrabacteria group597Open in IMG/M
3300034090|Ga0326723_0175291Not Available947Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.54%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere6.54%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.61%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere5.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere5.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere5.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.67%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil4.67%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.74%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.74%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.80%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.80%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.87%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.87%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.87%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.87%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.87%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.93%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.93%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.93%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003990Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2EnvironmentalOpen in IMG/M
3300004006Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005874Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404EnvironmentalOpen in IMG/M
3300005887Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403EnvironmentalOpen in IMG/M
3300005888Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006572Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006576Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011106Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011107Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012911Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300015261Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025556Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026025Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027560Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0055455_1014170213300003990Natural And Restored WetlandsVVLEVGIAGWALGSGVLWLLVMTVVVTVADTVWGVFRRRVPADIAGLEVALALGVMVVFGAEMFPEAITAAACFAWLIRDGRAGPARAG*
Ga0055453_1007349523300004006Natural And Restored WetlandsRAAVTTAVVLEVGIAGWALGSGVLWLLVMTVVVTVADTVWGVFRRRVPADIAGLEVALALGVMVVFGAEMFPEAITAAACFAWLIRDGRAGPARAG*
Ga0062595_10024729923300004479SoilVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLAMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVLFGADTFPEAITAAACFAWLIRDGRSRPARAG*
Ga0062592_10060033423300004480SoilVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLAMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVLFGADTFPEAITAAACFAWLIRDGRARPARAG*
Ga0066815_1001760813300005164SoilVVTTAVVLEVGIAGWALGYGALWLLMMTVAVTVADTIWGVFRRRVPADIAGLEVALALGVMVVFGADMFPEAITAAACF
Ga0070683_10137517313300005329Corn RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTAAVTIADTVWGVLLRRVPADIAGLEVALALAVMVVFGAGTFPEAITAAACFAWLIRDGRAGPARAS*
Ga0068869_10066801123300005334Miscanthus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAW
Ga0070682_10140687523300005337Corn RhizosphereFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRARPARAG*
Ga0068868_10001805333300005338Miscanthus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRAGPARAS*
Ga0070660_10008719823300005339Corn RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVLFGADTFPEAITAAACFAWLIRDGRARPARAG*
Ga0070691_1048998023300005341Corn, Switchgrass And Miscanthus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRARPARAG*
Ga0070671_10056793223300005355Switchgrass RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTAAVTIADTVWGVLLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRAGPARAGEPNQVWHRSP*
Ga0070688_10006322813300005365Switchgrass RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAATIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRAGPARAS*
Ga0070667_10030631523300005367Switchgrass RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACF
Ga0070700_10006836733300005441Corn, Switchgrass And Miscanthus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLAMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMILFGADTFPEAITAAACFAWLIRDGRAGPARAS*
Ga0070681_1042203323300005458Corn RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRGGPARAGVTR*
Ga0070706_10062119413300005467Corn, Switchgrass And Miscanthus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAATIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAW
Ga0070672_10187652613300005543Miscanthus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWL
Ga0070686_10001943533300005544Switchgrass RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTAAVTIADTVWGVLLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRAGPARAS*
Ga0070693_10024131423300005547Corn, Switchgrass And Miscanthus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTAAVTIADTVWGVLLRRVPADIAGLEVALALAVMVVFGAGTFPEAITAAACFAWLIRDGRARPARAG*
Ga0068856_10264467223300005614Corn RhizosphereLSRGVSCPYIGEVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTAAVTIADTVWGVLLRRVPADIAGLEVALALAVMVVFGAGTFPEAITGAACFAWLIRDGRAGPARAG*
Ga0070702_10006228933300005615Corn, Switchgrass And Miscanthus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAATIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRGGPARAGVTR*
Ga0068859_10082219913300005617Switchgrass RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAATIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRARPARAG*
Ga0068851_1002667133300005834Corn RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAATIADTVWGVFLRRVPADIAGLEVALALAVMVLFGADTFPEAITAAACFAWLIRDGRARPARAG*
Ga0075288_103183013300005874Rice Paddy SoilVFGSRRRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADAFPEAITAAACFAWLIRDGRSGHARAS*
Ga0075292_103729123300005887Rice Paddy SoilVFGSRSRAAVTTAVVLEVGIAGWALGHGALWLLVMTVAVTVADTIWGVFRRRVPADIAGLEVALALGVMVVFGAEMFPEAITAAACFAWLIRDGR
Ga0075289_100322233300005888Rice Paddy SoilVFGSRRRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRAGPARAT*
Ga0075289_103181123300005888Rice Paddy SoilVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADAFPEAITAAACFAWLIRDGRSGHARAS*
Ga0066651_1061730513300006031SoilLEVGIAGWALGHGALWLLMMTVAVTVTDTVWGVVRRRVPADIAGLEVALALGVMVVFGADMFPEAITAAACFAWLIRDGRTGQVLTSQ*
Ga0097621_10205407523300006237Miscanthus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLAMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVLFGADTFPEAITAAACFAWLIRDGRAGPARAS*
Ga0074051_1001705123300006572SoilVVLEVGIAGWALGYGALWLLMMTVAVTVADTIWGVFRRRVPADIAGLEVALALGVMVVFGADTFPEAITAAACFAWLIRDGRTGTRRRSQPS*
Ga0074047_1000262523300006576SoilVVLEVGIAGWALGYGALWLLMMTVAVTVADTIWGVFRRRVPADIAGLEVALALGVMVVFGADTFPEAITAAACFAWLIRDGRTGPAR
Ga0079220_1168931213300006806Agricultural SoilRGGVPLSRRVSYPYIGEVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRAGPARAG*
Ga0075425_10023155513300006854Populus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAATIADTVWGVFLRRVPADIAGLEVALALAVMVLFGAGTFPEAITAAACFAWLIRDGR
Ga0075436_10014149823300006914Populus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTAAVTIADTVWGVLLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRAGPARAG*
Ga0111539_1042679123300009094Populus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAATIADTVWGVFLRRVPADIAGLEVALALAVMVLLGADTFPEAITAAACFAWLIRDGRAGPARAS*
Ga0105245_1234080413300009098Miscanthus RhizosphereAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVLFGADTFPEAITAAACFAWLIRDGRARPARAG*
Ga0105243_1131343313300009148Miscanthus RhizosphereVVLEVGIAGWALGYGALWLLVMTVVVTVADTVWGVFQRRVPADIAGLEVGLALAVMVVFGADTFPEAITAAACFAWLIRDGRARPARAVGTR*
Ga0075423_1024323033300009162Populus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRAGPARAG*
Ga0105241_1009209723300009174Corn RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLAMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRGGPARAGVTR*
Ga0105242_1054966133300009176Miscanthus RhizosphereAGWALGYGALWLLVMTVVVTVADTVWGVFQRRVPADIAGLEVGLALAVMVVFGADTFPEAITAAACFAWLIRDGRARPARAVGTR*
Ga0105242_1112350323300009176Miscanthus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGAGTFPEAITAAVMTSS
Ga0105248_1034046513300009177Switchgrass RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLAMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGAGTLPEAITAAACFAWLIRDGRAG
Ga0105249_1025442013300009553Switchgrass RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGAGTLPEAITAAACFAWLIRDGRARPARA
Ga0134125_1029292133300010371Terrestrial SoilVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRARPARAGVTR*
Ga0134122_1097493923300010400Terrestrial SoilVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVCLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRGGPARAGVTR*
Ga0151489_135468223300011106SoilVGIAGWALGYGALWLLVMTVVVTVADTIWGVFQRRVPADIAGLEVGLALAVMVVFGADTFPEAITAAACFAWLIRDGRARPARAVGTR*
Ga0151489_135605123300011106SoilVGIAGWALGYGALWLLMMTVAVTVADTIWGVFRRRVPADIAGLEVALALGVMVVFGADMFPEAITAAACFAWLIRDGRTGPARAS*
Ga0151490_102769523300011107SoilVVLEVGIAGWALGYGALWLLMMTVAVTVADTIWGVFRRRVPADIAGLEVALALGVMVVFGAGTFPEAITAAACFAWLIRDGRTGPARAT*
Ga0137364_1069377923300012198Vadose Zone SoilVFGSRSRAAVTTAVVLEVGIAGWALGHGALWLLMMTVAVTVTDTVWGVVRRRVPADIAGLEVALALGVMVVFGADMFPEAITAAACFAWLIRDGRTGQVLTSQ*
Ga0157301_1012118623300012911SoilSCPYIGEVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLAMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVLFGADTFPEAITAAACFAWLIRDGRARPARAG*
Ga0164300_1022089023300012951SoilVVLEVGIAGWALGYGALWLLVMTVVVTVADTIWGVFQRRVPADIAGLEVGLALAVMVVFGADTFPEAITAAACFAWLIRDGRARPARAVGTR*
Ga0164298_1004344423300012955SoilVVLEVGIAGWALGYGALWLLVMTVAVTVADTIWGVFQRRVPADIAGLEVGLALAVMVVFGADTFPEAITAAACFAWLIRDGRARPARAVGTR*
Ga0164302_1038796413300012961SoilRPYIGGVFGSRSHAAVTTAVVLEVGIAGWALGYGALWLLVMTVVVTVADTVWGVFQRRVPADIAGLEVGLALAVMVVFGADTFPEAITAAACFAWLIRDGRARPARAVGTR*
Ga0164304_1136487623300012986SoilVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTAAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPKAITAAACFAWLIRDGRARPARAG*
Ga0164305_1004237733300012989SoilVVLEVGIAGWALGYGALWLLVMTVVVTVADTIWGVFQRRVPADIAGLEVGLALAVMVVFGADTFPEAITAAACFAWLIRDGRARPARAG*
Ga0164305_1042771713300012989SoilVVLEVGIAGWAFGYGALWLLAMTVAVTVADTIWGVFRRRVPADIAGLEVALALAVMVVFGADMFPEAITAAACFAWLIRDGRAGPARARVAR*
Ga0164305_1114657123300012989SoilLEVGVAGWALGYGALWLLAMTVAVTVADTVWGVFRRRVPADIAGLEVALALAVMVLFGAGTFPVAATAAACFAWLIRDGRAGPARAS*
Ga0157369_1014415133300013105Corn RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLAMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVLFGADTFPEAITAAACFAWHIRDGRARPARAG*
Ga0157375_1021216233300013308Miscanthus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLAMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRAGPARAS*
Ga0182008_1008592823300014497RhizosphereVFGSKSRAAVTTAVVLEVGIAGWAFGHGALWLLAMTIAVTIADTVWGVFRRRVPADIAGLEVALALAVMVVFGGEAFPEAITAAACFAWLIRDGRTGYQVTHRQP*
Ga0182006_122149623300015261RhizosphereVFGSKSRAAVTTAVVLEVGIAGWAFGHGALWLLAMTIAVTIADTVWGVFRRRVPADIAGLEVALALAVMMVFGGEAFPEAITAAACFAWLIRDGRTGYQVTHRQP*
Ga0132258_1098420543300015371Arabidopsis RhizosphereVVLEVGIAGWAFGYGGLWLLMMTVAVTVADTVWGVVRRRVPADIAGLEVALALAVMVVFGAGTFPEAIPAAACFAWLIRDGRTGPARSGVTR*
Ga0132258_1145603933300015371Arabidopsis RhizosphereVVLEVGIAGWALGYGALWLLVMTVVVTVADTIWGVFQRRVPADIAGLEVGLALAVMVVFGADAFPEAITAAACFAWLIRDGRARPARAVGTR*
Ga0132258_1309365813300015371Arabidopsis RhizosphereVVLEVGIAGWALGYGPLWLLMMTVTVTVADTIWGVFRRRVPADIAGLEVALALGVMVVFGAGTFPEALTAAACFAWLIRDGRTGPARAG*
Ga0132258_1371549323300015371Arabidopsis RhizosphereVILEVGIAGWAFGYGALWLLVMTVAVTVADTIWGVFRRRVAADIAGLEVALALGVMVVFGADMFPEAMTAAACFAWLIRDGRAGPVRAGVTR*
Ga0132256_10021253723300015372Arabidopsis RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTAAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRVRPARAG*
Ga0132256_10285048213300015372Arabidopsis RhizosphereVVLEVGIAGWALGYGPLWLLMMTVTVTVADTIWGVFRRRVPADIAGLEVALALGVMVVFGAGTFPEALTAAACFAWLIRDGRTGPARAS*
Ga0132257_10016044033300015373Arabidopsis RhizosphereVVLEVGIAGWAFGYGALWLLMMTVTVTVADTIWGVFRRRVPADIAGLEVALALGVMVVFGAGTFPEALTAAACFAWLIRDGRTGPARAG*
Ga0132257_10018320223300015373Arabidopsis RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTAAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRARPARAG*
Ga0132255_10347751213300015374Arabidopsis RhizosphereVVLEVGIAGWALGYGALWLLMMTVTVTVADTIWGVFRRRVPADIAGLEVALALGVMIVFGAGTFPEALTAAACFAWLIRDGRTGPARAS*
Ga0222622_1119300513300022756Groundwater SedimentLGYGALWLLMMTVTVTVADTIWGVFRRRVPADIAGLEVALALGVMVVFGAETFPEAITAAACFAWLIRDGRAGPARAGVTR
Ga0210120_104180923300025556Natural And Restored WetlandsVFGSRSRAAVTTAVVLEVGIAGWALGSGVLWLLVMTVVVTVADTVWGVFRRRVPADIAGLEVALALGVMVVFGAEMFPEAITAAACFAWLIRDGRAGPARAG
Ga0207642_1089216423300025899Miscanthus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRGGPARAGVTR
Ga0207688_1016558523300025901Corn, Switchgrass And Miscanthus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVLFGADTFPEAITAAACFAWLIRDGRARPARAG
Ga0207671_1085801623300025914Corn RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRARPARAG
Ga0207652_1038575923300025921Corn RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAATIADTVWGVFLRRVPADIAGLEVALALAVMVVFGAGAFPEAITAAACFAWLIRDGRARPARAG
Ga0207694_1010489733300025924Corn RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLAMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRARPARAG
Ga0207659_1058279613300025926Miscanthus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGAFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRAGPARAS
Ga0207690_1034495513300025932Corn RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLAMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVLFGADTFPEAITAAACFAWLIRDGRARPARAG
Ga0207686_1006256533300025934Miscanthus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRARPARAVGTR
Ga0207709_1167441623300025935Miscanthus RhizosphereGWALGHGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRGGPARAGVTR
Ga0207670_1177769613300025936Switchgrass RhizosphereRRVSYPYIGEVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRAGPARAS
Ga0207689_1029326023300025942Miscanthus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRGGPAR
Ga0207667_1038382623300025949Corn RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGALWLLVMTAAVTIADTVWGVLLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDG
Ga0207640_1006131733300025981Corn RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLAMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRAGPARAG
Ga0207677_1064604313300026023Miscanthus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGALWLLVMTAAVTIADTVWGVLLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRAGPARAS
Ga0208778_101261013300026025Rice Paddy SoilVFGSRRRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRAGPARAT
Ga0207703_1213599013300026035Switchgrass RhizosphereIGEVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAATIADTVWGVFLRRVPADIDGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRARPARAG
Ga0207639_1019755413300026041Corn RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLAMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVLFGADTFPEAITAAACFAWLIRDGRGGPARAGVTR
Ga0207708_1006583723300026075Corn, Switchgrass And Miscanthus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLAMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMILFGADTFPEAITAAACFAWLIRDGRAGPARAS
Ga0207702_1031952043300026078Corn RhizosphereVPLSRGVSCPYIGEVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLAMTVAVTIVDTVWGVFLRRVPADIAGLEVALALAVMVVFGAGTFPEAITAAACFAWLIRDGRAGPARAG
Ga0207648_1008252813300026089Miscanthus RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLAMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRGGPARAGVTR
Ga0207675_10224527723300026118Switchgrass RhizosphereVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRAR
Ga0207981_100387233300027560SoilVVLEVGIAGWALGHGALWLLMMTVTVTVADTIWGVFRRRVPADIAGLEVALALGVMVVFGADMFPEAITAAACFAWLIRDGRTGTRRRSQPS
Ga0268266_1112256823300028379Switchgrass RhizosphereLYTRGGVPLSRGVSCPYIGEVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRAGPARAS
Ga0247818_1056885723300028589SoilVPLSRRVSYPYIGEVFGSRSRAAVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIHDGSCLT
Ga0247818_1078285823300028589SoilMFGSRSRAAVTTVVVLEVGIAGWALGYGALWLLMMTVAVTVADTIWGVFRRRVAADIAGLEVALALGVMVVFGADMFPEAITAAACFAWLIRDGRTGPARAA
Ga0307319_1006870423300028722SoilVFGSRSRAAVTTAVVLEVGIAGWALGYGALWLLVMTVAVTVADTVWGVFQRRVAADIAGLEVALALAVMVVFGADTFPEAITAAACFAWLIRDGRAGPARAT
Ga0307305_1042884913300028807SoilVTTAVVLEVGIAGWALGYGALWLLMMTVTVTVADTIWGVFRRRVPADIAGLEVALALGVMVVFGAQTFPEAITAAACFAWLIRDGRAGPARAGVTR
Ga0307278_1054933913300028878SoilLGYGPLWLLMMTVAVTVADTVWGVVRRRVAADVAGLEVALALGVMVAFGADMFPEAITAAACFAWLIRDGRSRPVRTSEPV
Ga0307308_1039814423300028884SoilLGYCALWLLMMTVTVTVADTIWGVFRRRVPADIAGLEVALALGVMVVFGAETFPEAITAAACFAWLIRDGRAGPARAGVTR
Ga0308175_10005331343300031938SoilVVLEVGIAGWAFGYGALWLLAMTIAVTIADTVWGVFRRRVPADIAGLEVALALAVMVVFGGEAFPEAITAAACFAWLIRDGRTGYQVTHRQP
Ga0308176_1226953013300031996SoilVTTAVVLEVGIAGWALGYGPLWLLVMTVAVTIADTVWGVFLRRVPADIAGLEVALALAVMVVFGADAFPEAITAAACFAWLIRDGRAGPGRASEAPTVTR
Ga0326726_1026582523300033433Peat SoilVVLEVGIAGWALGYGALWLLMMTVAVTVADTIWGVFRRRVPADIAGLEVALALGVMVVFGADTFPEAITAAACFAWLIRDGRGRPARAG
Ga0247830_1123502613300033551SoilMFGSRSRAAVTTVVVLEVGIAGWALGYGALWLLMMTVAVTVADTIWGVFRRRVAADIAGLEVALALGVMVVFGADMFPEAITAAACFAWLIRDGRTGPARM
Ga0326723_0175291_66_3353300034090Peat SoilVVLEVGIAGWALGYGALWLLMMTVAITVADTIWGVFRRRVPADIAGLEVALALGVMVVFGADTFPEAITAAACFAWLIRDGRGRPARAG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.