Basic Information | |
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Family ID | F092347 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 107 |
Average Sequence Length | 51 residues |
Representative Sequence | MKICFASLRKKINYTDVLEYGMDVFYECFRYYKDNNKQHEYSYYNFA |
Number of Associated Samples | 97 |
Number of Associated Scaffolds | 107 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 97.20 % |
% of genes near scaffold ends (potentially truncated) | 100.00 % |
% of genes from short scaffolds (< 2000 bps) | 90.65 % |
Associated GOLD sequencing projects | 94 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (71.028 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (26.168 % of family members) |
Environment Ontology (ENVO) | Unclassified (81.308 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (79.439 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 46.81% β-sheet: 0.00% Coil/Unstructured: 53.19% | Feature Viewer |
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Powered by Feature Viewer |
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Pfam ID | Name | % Frequency in 107 Family Scaffolds |
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PF05118 | Asp_Arg_Hydrox | 14.95 |
PF01327 | Pep_deformylase | 3.74 |
PF02511 | Thy1 | 3.74 |
PF09312 | SurA_N | 0.93 |
COG ID | Name | Functional Category | % Frequency in 107 Family Scaffolds |
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COG3555 | Aspartyl/asparaginyl beta-hydroxylase, cupin superfamily | Posttranslational modification, protein turnover, chaperones [O] | 14.95 |
COG0242 | Peptide deformylase | Translation, ribosomal structure and biogenesis [J] | 3.74 |
COG1351 | Thymidylate synthase ThyX, FAD-dependent family | Nucleotide transport and metabolism [F] | 3.74 |
COG0760 | Peptidyl-prolyl isomerase, parvulin family | Posttranslational modification, protein turnover, chaperones [O] | 0.93 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 94.39 % |
Unclassified | root | N/A | 5.61 % |
Visualization |
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Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
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3300000117|DelMOWin2010_c10088631 | All Organisms → Viruses → Predicted Viral | 1176 | Open in IMG/M |
3300000140|LPfeb09P26500mDRAFT_c1032618 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 529 | Open in IMG/M |
3300000159|LPaug08P2610mDRAFT_c1004295 | All Organisms → Viruses → Predicted Viral | 2194 | Open in IMG/M |
3300000247|LPaug09P26500mDRAFT_1040818 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 566 | Open in IMG/M |
3300001450|JGI24006J15134_10059492 | All Organisms → Viruses → Predicted Viral | 1517 | Open in IMG/M |
3300001450|JGI24006J15134_10101514 | All Organisms → Viruses → Predicted Viral | 1032 | Open in IMG/M |
3300001450|JGI24006J15134_10226813 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 551 | Open in IMG/M |
3300001472|JGI24004J15324_10105051 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 718 | Open in IMG/M |
3300002040|GOScombined01_102568839 | All Organisms → Viruses → Predicted Viral | 1394 | Open in IMG/M |
3300002242|KVWGV2_10988358 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 512 | Open in IMG/M |
3300005613|Ga0074649_1173331 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 672 | Open in IMG/M |
3300005837|Ga0078893_11093898 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 580 | Open in IMG/M |
3300006193|Ga0075445_10340592 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 503 | Open in IMG/M |
3300006305|Ga0068468_1011990 | All Organisms → Viruses → Predicted Viral | 1363 | Open in IMG/M |
3300006326|Ga0068477_1340007 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 744 | Open in IMG/M |
3300006350|Ga0099954_1492255 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 664 | Open in IMG/M |
3300006352|Ga0075448_10152035 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 716 | Open in IMG/M |
3300006403|Ga0075514_1812209 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 917 | Open in IMG/M |
3300006735|Ga0098038_1054080 | All Organisms → Viruses → Predicted Viral | 1444 | Open in IMG/M |
3300006735|Ga0098038_1249438 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 561 | Open in IMG/M |
3300006737|Ga0098037_1103727 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 983 | Open in IMG/M |
3300006737|Ga0098037_1201300 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 652 | Open in IMG/M |
3300006749|Ga0098042_1026993 | All Organisms → Viruses → Predicted Viral | 1652 | Open in IMG/M |
3300006793|Ga0098055_1387315 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 518 | Open in IMG/M |
3300006921|Ga0098060_1064737 | All Organisms → Viruses → Predicted Viral | 1063 | Open in IMG/M |
3300007539|Ga0099849_1233437 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 681 | Open in IMG/M |
3300007541|Ga0099848_1278777 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 578 | Open in IMG/M |
3300007555|Ga0102817_1120965 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 580 | Open in IMG/M |
3300009001|Ga0102963_1064521 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 1507 | Open in IMG/M |
3300009027|Ga0102957_1235788 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 660 | Open in IMG/M |
3300009172|Ga0114995_10201510 | Not Available | 1105 | Open in IMG/M |
3300009409|Ga0114993_10558026 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 846 | Open in IMG/M |
3300009425|Ga0114997_10685985 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 536 | Open in IMG/M |
3300009428|Ga0114915_1109725 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 812 | Open in IMG/M |
3300009428|Ga0114915_1161113 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 632 | Open in IMG/M |
3300009432|Ga0115005_10406836 | All Organisms → Viruses → Predicted Viral | 1079 | Open in IMG/M |
3300009505|Ga0115564_10510161 | Not Available | 578 | Open in IMG/M |
3300009508|Ga0115567_10857981 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 540 | Open in IMG/M |
3300009512|Ga0115003_10263727 | Not Available | 1024 | Open in IMG/M |
3300009593|Ga0115011_10068341 | All Organisms → Viruses → Predicted Viral | 2455 | Open in IMG/M |
3300009703|Ga0114933_10343216 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 985 | Open in IMG/M |
3300009705|Ga0115000_10959263 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 522 | Open in IMG/M |
3300009785|Ga0115001_10175846 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 1391 | Open in IMG/M |
3300009785|Ga0115001_10687349 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 621 | Open in IMG/M |
3300009786|Ga0114999_10669226 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 780 | Open in IMG/M |
3300009790|Ga0115012_11428144 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 591 | Open in IMG/M |
3300011013|Ga0114934_10107667 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 1348 | Open in IMG/M |
3300011013|Ga0114934_10551965 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 508 | Open in IMG/M |
3300012928|Ga0163110_10032765 | All Organisms → Viruses → Predicted Viral | 3162 | Open in IMG/M |
3300012928|Ga0163110_10705591 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 787 | Open in IMG/M |
3300012954|Ga0163111_12568077 | Not Available | 519 | Open in IMG/M |
3300017728|Ga0181419_1110979 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 671 | Open in IMG/M |
3300017732|Ga0181415_1042257 | All Organisms → Viruses → Predicted Viral | 1042 | Open in IMG/M |
3300017741|Ga0181421_1095609 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 774 | Open in IMG/M |
3300017744|Ga0181397_1073996 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 916 | Open in IMG/M |
3300017752|Ga0181400_1116946 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 772 | Open in IMG/M |
3300017753|Ga0181407_1055327 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 1033 | Open in IMG/M |
3300017760|Ga0181408_1117670 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 688 | Open in IMG/M |
3300017764|Ga0181385_1260027 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 520 | Open in IMG/M |
3300017765|Ga0181413_1158092 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 682 | Open in IMG/M |
3300017773|Ga0181386_1009962 | All Organisms → Viruses → Predicted Viral | 3242 | Open in IMG/M |
3300017776|Ga0181394_1044520 | All Organisms → Viruses → Predicted Viral | 1510 | Open in IMG/M |
3300017779|Ga0181395_1239419 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 557 | Open in IMG/M |
3300017782|Ga0181380_1035714 | All Organisms → Viruses → Predicted Viral | 1811 | Open in IMG/M |
3300017949|Ga0181584_10271535 | All Organisms → Viruses → Predicted Viral | 1092 | Open in IMG/M |
3300020294|Ga0211520_1063920 | Not Available | 582 | Open in IMG/M |
3300020298|Ga0211657_1081412 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium | 610 | Open in IMG/M |
3300020335|Ga0211690_1141494 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 502 | Open in IMG/M |
3300020338|Ga0211571_1134920 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 551 | Open in IMG/M |
3300020396|Ga0211687_10011607 | All Organisms → Viruses → Predicted Viral | 4947 | Open in IMG/M |
3300020405|Ga0211496_10287738 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 613 | Open in IMG/M |
3300020417|Ga0211528_10031208 | All Organisms → Viruses → Predicted Viral | 2499 | Open in IMG/M |
3300020417|Ga0211528_10100439 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 1175 | Open in IMG/M |
3300020419|Ga0211512_10418722 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 602 | Open in IMG/M |
3300020438|Ga0211576_10034314 | All Organisms → Viruses → Predicted Viral | 2979 | Open in IMG/M |
3300020448|Ga0211638_10548279 | Not Available | 544 | Open in IMG/M |
3300020451|Ga0211473_10477176 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 636 | Open in IMG/M |
3300020460|Ga0211486_10237047 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 792 | Open in IMG/M |
3300020469|Ga0211577_10510759 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 727 | Open in IMG/M |
3300020595|Ga0206126_10334330 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 678 | Open in IMG/M |
3300021378|Ga0213861_10383076 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 696 | Open in IMG/M |
3300021443|Ga0206681_10275902 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 653 | Open in IMG/M |
3300023273|Ga0255763_1187836 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 827 | Open in IMG/M |
(restricted) 3300024259|Ga0233437_1127383 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 1205 | Open in IMG/M |
(restricted) 3300024327|Ga0233434_1207916 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 711 | Open in IMG/M |
3300025168|Ga0209337_1350556 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 506 | Open in IMG/M |
3300026074|Ga0208747_1101557 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 580 | Open in IMG/M |
3300026187|Ga0209929_1002281 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M | 6810 | Open in IMG/M |
3300027687|Ga0209710_1158509 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 814 | Open in IMG/M |
3300027801|Ga0209091_10483662 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 541 | Open in IMG/M |
3300027827|Ga0209035_10251964 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 880 | Open in IMG/M |
3300027830|Ga0209359_10310536 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 722 | Open in IMG/M |
3300028194|Ga0257106_1025365 | All Organisms → Viruses → Predicted Viral | 2348 | Open in IMG/M |
3300028197|Ga0257110_1102606 | All Organisms → Viruses → Predicted Viral | 1195 | Open in IMG/M |
3300028489|Ga0257112_10246570 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 612 | Open in IMG/M |
3300031141|Ga0308021_10284472 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 620 | Open in IMG/M |
3300031143|Ga0308025_1122583 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 940 | Open in IMG/M |
3300031167|Ga0308023_1010162 | All Organisms → Viruses → Predicted Viral | 2013 | Open in IMG/M |
3300031519|Ga0307488_10321534 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 987 | Open in IMG/M |
3300031519|Ga0307488_10406891 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 839 | Open in IMG/M |
3300031659|Ga0307986_10340331 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 617 | Open in IMG/M |
3300031696|Ga0307995_1192331 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 729 | Open in IMG/M |
3300031703|Ga0308002_1120886 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 554 | Open in IMG/M |
3300031848|Ga0308000_10162392 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 840 | Open in IMG/M |
3300032073|Ga0315315_10957543 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 770 | Open in IMG/M |
3300032278|Ga0310345_11980203 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 566 | Open in IMG/M |
3300034695|Ga0372840_163203 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED239 | 664 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
⦗Top⦘ |
Habitat | Taxonomy | Distribution |
Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 26.17% |
Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 14.95% |
Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 12.15% |
Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 6.54% |
Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 2.80% |
Marine | Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine | 2.80% |
Surface Seawater | Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater | 2.80% |
Marine | Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine | 2.80% |
Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 2.80% |
Deep Subsurface | Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface | 2.80% |
Pond Water | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water | 2.80% |
Deep Ocean | Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean | 1.87% |
Seawater | Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater | 1.87% |
Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 1.87% |
Sackhole Brine | Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine | 1.87% |
Seawater | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater | 1.87% |
Salt Marsh | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh | 1.87% |
Pelagic Marine | Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine | 1.87% |
Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 0.93% |
Marine Surface Water | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water | 0.93% |
Marine | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine | 0.93% |
Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine | 0.93% |
Seawater | Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater | 0.93% |
Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine | 0.93% |
Marine Sediment | Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment | 0.93% |
Saline Water And Sediment | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment | 0.93% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300000117 | Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010 | Environmental | Open in IMG/M |
3300000140 | Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - February 2009 P26 500m | Environmental | Open in IMG/M |
3300000159 | Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2008 P26 10m | Environmental | Open in IMG/M |
3300000247 | Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P26 500m | Environmental | Open in IMG/M |
3300001450 | Marine viral communities from the Pacific Ocean - LP-53 | Environmental | Open in IMG/M |
3300001472 | Marine viral communities from the Pacific Ocean - LP-32 | Environmental | Open in IMG/M |
3300002040 | GS000c - Sargasso Station 3 | Environmental | Open in IMG/M |
3300002242 | Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey mat | Environmental | Open in IMG/M |
3300005613 | Saline sediment microbial communities from Etoliko Lagoon, Greece - sediment | Environmental | Open in IMG/M |
3300005837 | Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18 | Environmental | Open in IMG/M |
3300006193 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA | Environmental | Open in IMG/M |
3300006305 | Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0025m | Environmental | Open in IMG/M |
3300006326 | Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0770m | Environmental | Open in IMG/M |
3300006350 | Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0075m | Environmental | Open in IMG/M |
3300006352 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA | Environmental | Open in IMG/M |
3300006403 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006735 | Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG | Environmental | Open in IMG/M |
3300006737 | Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG | Environmental | Open in IMG/M |
3300006749 | Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG | Environmental | Open in IMG/M |
3300006793 | Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG | Environmental | Open in IMG/M |
3300006921 | Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG | Environmental | Open in IMG/M |
3300007539 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG | Environmental | Open in IMG/M |
3300007541 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG | Environmental | Open in IMG/M |
3300007555 | Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555 | Environmental | Open in IMG/M |
3300009001 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG | Environmental | Open in IMG/M |
3300009027 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG | Environmental | Open in IMG/M |
3300009172 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 | Environmental | Open in IMG/M |
3300009409 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 | Environmental | Open in IMG/M |
3300009425 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 | Environmental | Open in IMG/M |
3300009428 | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 | Environmental | Open in IMG/M |
3300009432 | Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome | Environmental | Open in IMG/M |
3300009505 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 | Environmental | Open in IMG/M |
3300009508 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 | Environmental | Open in IMG/M |
3300009512 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 | Environmental | Open in IMG/M |
3300009593 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome | Environmental | Open in IMG/M |
3300009703 | Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG | Environmental | Open in IMG/M |
3300009705 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 | Environmental | Open in IMG/M |
3300009785 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 | Environmental | Open in IMG/M |
3300009786 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 | Environmental | Open in IMG/M |
3300009790 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome | Environmental | Open in IMG/M |
3300011013 | Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG | Environmental | Open in IMG/M |
3300012928 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG | Environmental | Open in IMG/M |
3300012954 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG | Environmental | Open in IMG/M |
3300017728 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24 | Environmental | Open in IMG/M |
3300017732 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11 | Environmental | Open in IMG/M |
3300017741 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19 | Environmental | Open in IMG/M |
3300017744 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23 | Environmental | Open in IMG/M |
3300017752 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22 | Environmental | Open in IMG/M |
3300017753 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26 | Environmental | Open in IMG/M |
3300017760 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16 | Environmental | Open in IMG/M |
3300017764 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11 | Environmental | Open in IMG/M |
3300017765 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28 | Environmental | Open in IMG/M |
3300017773 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24 | Environmental | Open in IMG/M |
3300017776 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23 | Environmental | Open in IMG/M |
3300017779 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16 | Environmental | Open in IMG/M |
3300017782 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19 | Environmental | Open in IMG/M |
3300017949 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300020294 | Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556124-ERR599153) | Environmental | Open in IMG/M |
3300020298 | Marine microbial communities from Tara Oceans - TARA_B100000953 (ERX556051-ERR599128) | Environmental | Open in IMG/M |
3300020335 | Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX556030-ERR599035) | Environmental | Open in IMG/M |
3300020338 | Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX555920-ERR599099) | Environmental | Open in IMG/M |
3300020396 | Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122) | Environmental | Open in IMG/M |
3300020405 | Marine microbial communities from Tara Oceans - TARA_B000000532 (ERX556129-ERR599012) | Environmental | Open in IMG/M |
3300020417 | Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082) | Environmental | Open in IMG/M |
3300020419 | Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX555964-ERR598955) | Environmental | Open in IMG/M |
3300020438 | Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942) | Environmental | Open in IMG/M |
3300020448 | Marine microbial communities from Tara Oceans - TARA_B100000941 (ERX555919-ERR598954) | Environmental | Open in IMG/M |
3300020451 | Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996) | Environmental | Open in IMG/M |
3300020460 | Marine microbial communities from Tara Oceans - TARA_A100001037 (ERX555931-ERR599097) | Environmental | Open in IMG/M |
3300020469 | Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052) | Environmental | Open in IMG/M |
3300020595 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1 | Environmental | Open in IMG/M |
3300021378 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131 | Environmental | Open in IMG/M |
3300021443 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015 | Environmental | Open in IMG/M |
3300023273 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG | Environmental | Open in IMG/M |
3300024259 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_200_MG | Environmental | Open in IMG/M |
3300024327 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_120_MG | Environmental | Open in IMG/M |
3300025168 | Marine viral communities from the Pacific Ocean - LP-53 (SPAdes) | Environmental | Open in IMG/M |
3300026074 | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_A (SPAdes) | Environmental | Open in IMG/M |
3300026187 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes) | Environmental | Open in IMG/M |
3300027687 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes) | Environmental | Open in IMG/M |
3300027801 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes) | Environmental | Open in IMG/M |
3300027827 | Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV (SPAdes) | Environmental | Open in IMG/M |
3300027830 | Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV (SPAdes) | Environmental | Open in IMG/M |
3300028194 | Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10m | Environmental | Open in IMG/M |
3300028197 | Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10m | Environmental | Open in IMG/M |
3300028489 | Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1000m | Environmental | Open in IMG/M |
3300031141 | Marine microbial communities from water near the shore, Antarctic Ocean - #351 | Environmental | Open in IMG/M |
3300031143 | Marine microbial communities from water near the shore, Antarctic Ocean - #422 | Environmental | Open in IMG/M |
3300031167 | Marine microbial communities from water near the shore, Antarctic Ocean - #418 | Environmental | Open in IMG/M |
3300031519 | Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2 | Environmental | Open in IMG/M |
3300031659 | Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82 | Environmental | Open in IMG/M |
3300031696 | Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262 | Environmental | Open in IMG/M |
3300031703 | Marine microbial communities from water near the shore, Antarctic Ocean - #34 | Environmental | Open in IMG/M |
3300031848 | Marine microbial communities from water near the shore, Antarctic Ocean - #3 | Environmental | Open in IMG/M |
3300032073 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416 | Environmental | Open in IMG/M |
3300032278 | Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG | Environmental | Open in IMG/M |
3300034695 | Seawater microbial communities from the Northeast subarctic Pacific Ocean - P26_June_2012_500m | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOWin2010_100886313 | 3300000117 | Marine | MNICFASLRKRINYTDVLEYGMDVFYECFRYYKDNNKQHKYSY |
LPfeb09P26500mDRAFT_10326181 | 3300000140 | Marine | MKICFASLRKRINYTDVLEYGMDVFYESFRYYKDNNKHHDFSYY |
LPaug08P2610mDRAFT_10042954 | 3300000159 | Marine | MKICIASLSKKINYNDVLEHAMDDFYESIRHYVDNNPQHEYSYYNFAFNKGAERDSSVIE |
LPaug09P26500mDRAFT_10408181 | 3300000247 | Marine | MKICFASLRKRINYTDVLEYGMDVFYESFRYYKDNNKHHDFSYYNFAWGSKGAERNLDAI |
JGI24006J15134_100594924 | 3300001450 | Marine | MKICFASLRRKINYTDVLEYGMDVFYESFRYYKDNNPQHEYSYYNFAWGSKGAKRDKQVIKE |
JGI24006J15134_101015141 | 3300001450 | Marine | MKICFASLRKKINYTDVLEYGMDVFYECFRYYKDNNKEHDFTYYNFAWGPKGAERDISALKDADIVV |
JGI24006J15134_102268132 | 3300001450 | Marine | MKICFASLRKKINYTDVLEYGMDVFYECFRYYKDNNKQHEYSYYNFAWGSRGAKRDSDVIKNAD |
JGI24004J15324_101050512 | 3300001472 | Marine | MKICFASLRKKINYTDVLEYGMDVFYECFRYYKDNNKDYDFTYYNFAWGPKGAE |
GOScombined01_1025688393 | 3300002040 | Marine | MKICFASLRKKINYTDVLEYGMDVFYECFRHYKDNNKEHEFTYYNFAWGSKGAER |
KVWGV2_109883581 | 3300002242 | Marine Sediment | MNICFASLRKKINYTDVLEYGMDVFYECFRYYKDNNKEHNFTYYNFAWGPKGAERDINALKE |
Ga0074649_11733312 | 3300005613 | Saline Water And Sediment | MKICFASLRKKINYSDVLEHGMDVFYESFKQYALNNKQHEYSYYN |
Ga0078893_110938981 | 3300005837 | Marine Surface Water | MKICFASLRKKINYTDVLEYGMDVFYECFRYYKDNNKEHDFTYYNFAWGSK |
Ga0075445_103405922 | 3300006193 | Marine | MNICFASLRKRINYTDVLEYGMDVFYECFRYYKDNNKQHNYSYYNFAW |
Ga0068468_10119903 | 3300006305 | Marine | MKICFASLRKKINYTDVLEYGMDVFYECFRYFKDNNKEHEF |
Ga0068477_13400072 | 3300006326 | Marine | MKICFASLRKRINYTDVLEYGMDVFYESFRYYKDNNKHHDFSYYNFAWGSKGAERNLDAIKNAD |
Ga0099954_14922551 | 3300006350 | Marine | MKICFASLRKKINYTDVLEYGMDVFYECFRYYKDNNKEHNFTYYNFAWGPKGAERDI |
Ga0075448_101520351 | 3300006352 | Marine | MNICFASLRKRINYTDVLEYGMDVFYECFRYYKDN |
Ga0075514_18122091 | 3300006403 | Aqueous | MKICFASLRKKINYTEPLEYGMDVFYESFNHYTKNNKQHDYS |
Ga0098038_10540801 | 3300006735 | Marine | MKICFASLRKKINYTDVLEYGMDVFYESFRYYKDNNKQHDFTYYNFAW |
Ga0098038_12494381 | 3300006735 | Marine | MKICFASLRKKINYTDVLEYGMDVFYESFRYYKDNNKQHDFTYYNFAWGS |
Ga0098037_11037272 | 3300006737 | Marine | MKICFASLRKKINYTDVLEYGMDVFYESFRYYKDNNKQ |
Ga0098037_12013002 | 3300006737 | Marine | MKICFASLRKKINYTDVLEYGMDVFYESFRYYKDNNKEYDFTYYNFA |
Ga0098042_10269931 | 3300006749 | Marine | MKICFASLRKKINYTDVLEYGMDVFYESFRYYKDNNK |
Ga0098055_13873151 | 3300006793 | Marine | MKICFASLRKKINYTDVLEYGMDVFYESFRYYKDNNKQHDFTYYNFAWGSKGAERDISVLKDADIVVF |
Ga0098060_10647373 | 3300006921 | Marine | MKICFASLRKKINYTDVLEYGMDVFYESFRYYKDSNKQHDLTYYNFAWGSKGAERDI |
Ga0099849_12334372 | 3300007539 | Aqueous | MKICFASLRKKINYTEVLEYGMDVFYECFRNYTNNNKQHEYSYYNFAYAN |
Ga0099848_12787771 | 3300007541 | Aqueous | MKICFASLRKKINYTEPLEYGMDVFYESFNHYTKNNKQHDYSFYNFSFKSKGA |
Ga0102817_11209652 | 3300007555 | Estuarine | MKICFASLRKKINYTDVLEYGMDVFYECFRHYKDNNKQH |
Ga0102963_10645213 | 3300009001 | Pond Water | MKICFASLRKKVNYTEPLEYGMDVFYESFNHYTKNNKQH |
Ga0102957_12357882 | 3300009027 | Pond Water | MKICFASLRKKINYTEPLEYGMDVFYESFNHYTKNNKQHDYSFYNFSFKSKGAERNLEHIKNADV |
Ga0114995_102015101 | 3300009172 | Marine | MAKIFQKEKKMKICFASLRRKINYTDVLEYGMDVFYESFRYYKDNNPQHEYSYYNFAW |
Ga0114993_105580261 | 3300009409 | Marine | MKICFASLRRKINYTDVLEYGMDVFYESFRYYKDNNPQ |
Ga0114997_106859851 | 3300009425 | Marine | MNICFASLRKRINYTDVLEYGMDVFYECFRYYKDNNKQHNYSYYNFAWGSK |
Ga0114915_11097251 | 3300009428 | Deep Ocean | MKICFASLRKKINHTDVLEHGMDVFYESFRYYVKNNPQHQYSYYNFAFGKGAERDK |
Ga0114915_11611131 | 3300009428 | Deep Ocean | MKICFASLRKKINYTDVLEYGMDVFYESFRYYKDNN |
Ga0115005_104068361 | 3300009432 | Marine | MNICFASLRKRINYTDVLEYGMDVFYECFRYYKDNNKQHNYSYYNFAWGSKGA |
Ga0115564_105101613 | 3300009505 | Pelagic Marine | MKICFASLRKKVNYTDVLEYGMDVFYESFRYYKDNNPQHEYSYYNFAYGS |
Ga0115567_108579812 | 3300009508 | Pelagic Marine | MNICFASLRKRINYTDVLEYGMDVFYECFRYYKDNNKQHKYSYYNFAWGSKGAE |
Ga0115003_102637271 | 3300009512 | Marine | MAKIFQKEKKMKICFASLRRKINYTDVLEYGMDVFYESFRYYKDNNPQHEYSYYNFA |
Ga0115011_100683415 | 3300009593 | Marine | MKICFASLRKKINYTDVLEYGMDVFYECFRHYKDNNKQQHEYSYYNFAFGKGAVRDNT |
Ga0114933_103432161 | 3300009703 | Deep Subsurface | MKICFASLRKKVNYTDVLEYGMDVFYECFRYFKDNNKEH |
Ga0115000_109592631 | 3300009705 | Marine | MNICFASLRKRINYTDVLEYGMDVFYECFRYYKDNNKQHNYSYYNFA |
Ga0115001_101758461 | 3300009785 | Marine | MKICFASLRKKINYTDVLEYGMDVFYESFRYYKDNNP |
Ga0115001_106873491 | 3300009785 | Marine | MKICFASLRKKINYTDVLEYGMDVFYECFRYYKDNNKQ |
Ga0114999_106692261 | 3300009786 | Marine | MKICFASLRKKINYTDVLEYGMDVFYECFRYYKENNKQHEYSYYNFAWGGKGAERNP |
Ga0115012_114281442 | 3300009790 | Marine | MKICFASLRKKINYTDVLEYGMDVFYECFRYFKDNNKEHEFTYYNFAWGSKGAERDINALKHADIVV |
Ga0114934_101076671 | 3300011013 | Deep Subsurface | MNICFASLRKKVNYNDVLEYGMDVFYECFRYYKDNNPQHIFTYYNFAF |
Ga0114934_105519651 | 3300011013 | Deep Subsurface | MKICFASLRKKINYTDVLEYGMDVFYECFRYYKDNN |
Ga0163110_100327656 | 3300012928 | Surface Seawater | MKICFASLRKKINYTDVLEYGMDVFYECFRYYKDNNKEHEFTYYNFAWGSKGAERDINALKD |
Ga0163110_107055911 | 3300012928 | Surface Seawater | MKICFASLRKKINYTDVLEYGMDVFYESFRYYKDNNKQHDFTYYNF |
Ga0163111_125680773 | 3300012954 | Surface Seawater | MKICFASLRKKINYTDVLEYGMDVFYECFRHYKDNNKQHDYSYYNFAFGKGAVRDN |
Ga0181419_11109793 | 3300017728 | Seawater | MKICFASLRKKVNYTDVLEYGMDVFYESFRYYKDNNPQHEYSYY |
Ga0181415_10422571 | 3300017732 | Seawater | MKICFASLRKKVNYTDVLEYGMDVFYESFRYYKDNNPQHEYSYYNFAYGSKGATRDKQVIKEADVIV |
Ga0181421_10956092 | 3300017741 | Seawater | MKICFASLRKKVNYTDVLEYGMDVFYESFRYYKDNNKQHEYSYYNFAWGSKGA |
Ga0181397_10739961 | 3300017744 | Seawater | MKICFASLRKKINYTDVLEYGMDVFYECFRYYKDNNKDYDF |
Ga0181400_11169461 | 3300017752 | Seawater | MKICFASLRKKVNYTDVLEYGMDVFYESFRYYKDNNP |
Ga0181407_10553273 | 3300017753 | Seawater | MKICFASLRKKINYTDVLEYGMDVFYESFRYYKDNNKQHDF |
Ga0181408_11176701 | 3300017760 | Seawater | MKICFASLRKKINYTDVLEYGMDVFYESFRYYKDNNKQHDFTY |
Ga0181385_12600271 | 3300017764 | Seawater | MKICFASLRKKVNYTDVLEYGMDVFYESFRYYKDNNKQHEYSYYNFAWGSKGAERNSDAIKNAD |
Ga0181413_11580921 | 3300017765 | Seawater | MKICFASLRKKVNYTDVLEYGMDVFYESFRYYKDNNPQHEYSYYNFAYGSKGATRDF |
Ga0181386_10099627 | 3300017773 | Seawater | MKICFASLRKKVNYTDVLEYGMDVFYESFRYYKDNNPQHEYSYYNFAYGSKGATRD |
Ga0181394_10445201 | 3300017776 | Seawater | MKICFASLRKKINYTDVLEYGMDVFYECFRYYKDNNKDYDFTYYNFAWGPKGAERDINALKDADIVV |
Ga0181395_12394191 | 3300017779 | Seawater | MAKIFQKEKSMKICFASLRKKINYTDVLEYGMDVFYESFRYYKDNN |
Ga0181380_10357141 | 3300017782 | Seawater | MKICFASLRKKVNYTDVLEYGMDVFYESFRYYKDNNPQHEYSYYNFAYGSKG |
Ga0181584_102715351 | 3300017949 | Salt Marsh | MKICFASLRKKINYTEPLEYGMDVFYESFNHYTKNNKQHDYSFYNFSFKSK |
Ga0211520_10639202 | 3300020294 | Marine | MKICFASLRKKVNYTDVLEYGMDVFYESFRYYKDSNPQHEYSYYNF |
Ga0211657_10814122 | 3300020298 | Marine | MKICFASLRKRINYTDVLEYGMDVFYESFRYYKDNNKHHDFSYYNF |
Ga0211690_11414941 | 3300020335 | Marine | MNICFASLRKRINYTDVLEYGMDVFYECFRYYKDNNKQHKYSYYNFAWGSKGAERNTDAIKN |
Ga0211571_11349202 | 3300020338 | Marine | VKICFASLRKRINYTDVLEYGMDVFYESYRNYVRN |
Ga0211687_100116071 | 3300020396 | Marine | MKICIASLSKKINYNDVLEHAMDDFYESIRHYVDNNPQHEYSYYNFAFNKGAERDSSIIEKA |
Ga0211496_102877382 | 3300020405 | Marine | MKICFASLRKKINYTDVLEYGMDVFYECFRHYKDNNKEH |
Ga0211528_100312081 | 3300020417 | Marine | MNICFASLRKKVNYNDVLEYGMDVFYECFRYYKDNNPQH |
Ga0211528_101004391 | 3300020417 | Marine | MKICFASLRKKVNYTDVLEYGMDVFYECFRYYKDNNPQH |
Ga0211512_104187221 | 3300020419 | Marine | MKICFASLRKKVNYTDVLEYGMDVFYESFRYYKDNNKQHE |
Ga0211576_100343146 | 3300020438 | Marine | MKICIASLSKKINYNDVLEHAMDDFYESIRHYVDNNPQHEYSYYNFAFNKGAERDSSVIEKAEVIIFPA |
Ga0211638_105482791 | 3300020448 | Marine | MKICFASLRKKVNYTDVLEYGMDVFYESFRYYKDSNPQHE |
Ga0211473_104771761 | 3300020451 | Marine | MKICFASLRKKINYTDVLEYGMDVFYESFRYYKDNNKQHDFTYYNFAWGPKGAERDINALKDAEI |
Ga0211486_102370471 | 3300020460 | Marine | MKICFASLRKKINYTDVLEYGMDVFYECFRHYKDNNKEHEFTYYNFA |
Ga0211577_105107592 | 3300020469 | Marine | MKICFASLRKKINYTDVLEYGMDVFYECFRHYKDNNKQ |
Ga0206126_103343301 | 3300020595 | Seawater | MNICFASLRKRINYTDVLEYGMDVFYECFRYYKDNNKQHKYSYYNFAWGSKGAERNPD |
Ga0213861_103830761 | 3300021378 | Seawater | MKICFASLRKKINYTEVLEYGMDVFYECFRNYTNNNKQ |
Ga0206681_102759022 | 3300021443 | Seawater | MKICFASLRKRINYTDVLEYGMDVFYESFRYYKDNNKHHDFSYYNFAWGS |
Ga0255763_11878361 | 3300023273 | Salt Marsh | MKICFASLRKKINYTEPLEYGMDVFYESFNHYTKNNKQHDYSFYNFSFK |
(restricted) Ga0233437_11273831 | 3300024259 | Seawater | MNICFASLRKRINYTDVLEYGMDVFYECFRYYKDNNKQHKYSYYNFAWGSKGAERNP |
(restricted) Ga0233434_12079162 | 3300024327 | Seawater | MNICFASLRKRINYTDVLEYGMDVFYECFRYYKDNNKQHKYSYYNFAWGSKGAERNPDAIKNA |
Ga0209337_13505561 | 3300025168 | Marine | MKICFASLRKKINYTDVLEYGMDVFYECFRYYKDNNKQHEYSYYNFAWGSKGAERNP |
Ga0208747_11015571 | 3300026074 | Marine | MKICFASLRKRINYTDVLEYGMDVFYESFRYYKDNNKHHDFSYYNFAWGSKGAERNLDVIKNAD |
Ga0209929_10022819 | 3300026187 | Pond Water | MKICFASLRKKVNYTEPLEYGMDVFYESYNHFIKNNKQHDYSFY |
Ga0209710_11585093 | 3300027687 | Marine | MKICFASLRRKINYTDVLEYGMDVFYESFRYYKDNNPQHEYSYYNFAWG |
Ga0209091_104836621 | 3300027801 | Marine | MNICFASLRKRINYTDVLEYGMDVFYECFRYYKDNNKQHNY |
Ga0209035_102519641 | 3300027827 | Marine | MNICFASLRKRINYTDVLEYGMDVFYECFRYYKDNNKQHKYSYYNFAWGSKGAERNTDAIKNAEI |
Ga0209359_103105362 | 3300027830 | Marine | MKICFASLRKKINYTDVLEYGMDVFYECFRYYKDNNKEHDFTYYNFAWGSKGAERDISALKH |
Ga0257106_10253655 | 3300028194 | Marine | MKICFASLRRKINYTDVLEYGMDVFYESFRYYKDNNPQHEYSYYNFAW |
Ga0257110_11026061 | 3300028197 | Marine | MKICFASLRRKINYTDVLEYGMDVFYESFRYYKDNNPQHEYSYYNF |
Ga0257112_102465701 | 3300028489 | Marine | MKICIASLSKKINYNDVLEHAMDDFYESLRYYVNNNPQHEYSYYNFAFNKGAERDSSVIKEAEVI |
Ga0308021_102844722 | 3300031141 | Marine | MNICFASLRKRINYTDVLEYGMDVFYECFRYYKDNNKQHKYSYYNFAWGSKGAERN |
Ga0308025_11225831 | 3300031143 | Marine | MKICFASLRKKINHTDVLEHGMDVFYESFRYYVKNNPQHQYSYYNFAFGKGAERD |
Ga0308023_10101621 | 3300031167 | Marine | MNICFASLRKRINYTDVLEYGMDVFYECFRYYKDNNKQHKYSYYNFAWGSKGAERNTD |
Ga0307488_103215342 | 3300031519 | Sackhole Brine | MKICFASLRKKINYTDVLEYGMDVFYESFRYYKDNNPQHEYS |
Ga0307488_104068911 | 3300031519 | Sackhole Brine | MNICFASLRKRINYTDVLEYGMDVFYECFRYYKDNNKQHNYSYYNFAWGSKGAERNPDA |
Ga0307986_103403312 | 3300031659 | Marine | MKICFASLRKKINHTDVLEHGMDVFYESFRYYVKNNPQHQYSYYN |
Ga0307995_11923311 | 3300031696 | Marine | MKICFASLRKKINYTDVLEYGMDVFYECFRYYKDNNKQHEYSYYNFA |
Ga0308002_11208863 | 3300031703 | Marine | MKICFASLRKKINYTDVLEYGMDVFYESFRYYKDNNPQ |
Ga0308000_101623922 | 3300031848 | Marine | MNICFASLRKRINYTDVLEYGMDVFYESFRYYKDNNKQHNYSYYNFAWGSKGAERNTDAIKNADV |
Ga0315315_109575431 | 3300032073 | Seawater | MKICFASLRKKINYTDVLEYGMDVFYECFRYYKDNNKDYDFTYYNFAWGSKGAERD |
Ga0310345_119802032 | 3300032278 | Seawater | MKICFASLRKRINYTDVLEYGMDVFYESYRHYVRNNPQHEYTYYNFAFGSKGAVRDNNVI |
Ga0372840_163203_528_662 | 3300034695 | Seawater | MKICFASLRKRINYTDVLEYGMDVFYESFRYYKDNNKHHDFYYYN |
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