Metagenome / Metatranscriptome Family F092386

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092386
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	44 residues
Representative Sequence	MFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Number of Associated Samples	81
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.21 %
% of genes near scaffold ends (potentially truncated)	56.07 %
% of genes from short scaffolds (< 2000 bps)	84.11 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.617 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.234 % of family members)
Environment Ontology (ENVO)	Unclassified (25.234 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.860 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 45.45% β-sheet: 0.00% Coil/Unstructured: 54.55%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF14534	DUF4440	6.54
PF04392	ABC_sub_bind	2.80
PF13467	RHH_4	0.93
PF00939	Na_sulph_symp	0.93
PF00072	Response_reg	0.93
PF13091	PLDc_2	0.93
PF13701	DDE_Tnp_1_4	0.93
PF00196	GerE	0.93
PF13432	TPR_16	0.93
PF01527	HTH_Tnp_1	0.93
PF05658	YadA_head	0.93
PF00816	Histone_HNS	0.93
PF13358	DDE_3	0.93
PF07929	PRiA4_ORF3	0.93
PF07110	EthD	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.80
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	0.93
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	0.93
COG2916	DNA-binding protein H-NS	Transcription [K]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.62 %
Unclassified	root	N/A	37.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.62 %
Unclassified	root	N/A	37.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.62 %
Unclassified	root	N/A	37.38 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	42.06 %
Unclassified	root	N/A	37.38 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	16.82 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	40.19 %
Unclassified	root	N/A	37.38 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	16.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.38 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	33.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	32.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.82 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.93 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	32.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.82 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.93 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005163\|Ga0066823_10111530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300005172\|Ga0066683_10015787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4113	Open in IMG/M
3300005174\|Ga0066680_10172325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1361	Open in IMG/M
3300005177\|Ga0066690_10065471	Not Available	2260	Open in IMG/M
3300005187\|Ga0066675_10548815	Not Available	867	Open in IMG/M
3300005332\|Ga0066388_101272085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1265	Open in IMG/M
3300005332\|Ga0066388_104816889	Not Available	686	Open in IMG/M
3300005445\|Ga0070708_100451768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1212	Open in IMG/M
3300005447\|Ga0066689_10643220	Not Available	666	Open in IMG/M
3300005468\|Ga0070707_100284972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1605	Open in IMG/M
3300005468\|Ga0070707_100960737	Not Available	819	Open in IMG/M
3300005468\|Ga0070707_101367483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300005471\|Ga0070698_101567136	Not Available	610	Open in IMG/M
3300005552\|Ga0066701_10117963	Not Available	1568	Open in IMG/M
3300005552\|Ga0066701_10566465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	696	Open in IMG/M
3300005557\|Ga0066704_10567745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	736	Open in IMG/M
3300005713\|Ga0066905_102018620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300005713\|Ga0066905_102188498	Not Available	515	Open in IMG/M
3300005764\|Ga0066903_100599505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1908	Open in IMG/M
3300005764\|Ga0066903_105329535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	679	Open in IMG/M
3300005764\|Ga0066903_107487695	Not Available	563	Open in IMG/M
3300005764\|Ga0066903_108974409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300005937\|Ga0081455_10302772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1146	Open in IMG/M
3300006028\|Ga0070717_10087475	All Organisms → cellular organisms → Bacteria	2624	Open in IMG/M
3300006176\|Ga0070765_101716661	Not Available	589	Open in IMG/M
3300006794\|Ga0066658_10462178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300006800\|Ga0066660_10120362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1896	Open in IMG/M
3300006854\|Ga0075425_100239818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2086	Open in IMG/M
3300007255\|Ga0099791_10517789	Not Available	580	Open in IMG/M
3300009012\|Ga0066710_102137976	Not Available	820	Open in IMG/M
3300009012\|Ga0066710_102660836	Not Available	716	Open in IMG/M
3300010046\|Ga0126384_12037957	Not Available	549	Open in IMG/M
3300010047\|Ga0126382_11399440	Not Available	638	Open in IMG/M
3300010047\|Ga0126382_12288164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300010047\|Ga0126382_12490054	Not Available	504	Open in IMG/M
3300010335\|Ga0134063_10274742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300010360\|Ga0126372_10465748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1176	Open in IMG/M
3300010362\|Ga0126377_12536276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300010366\|Ga0126379_10092137	Not Available	2666	Open in IMG/M
3300010398\|Ga0126383_10654781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1126	Open in IMG/M
3300012096\|Ga0137389_10395539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1180	Open in IMG/M
3300012189\|Ga0137388_10915739	Not Available	810	Open in IMG/M
3300012198\|Ga0137364_10218734	Not Available	1400	Open in IMG/M
3300012198\|Ga0137364_10619246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300012199\|Ga0137383_10053112	All Organisms → cellular organisms → Bacteria	2900	Open in IMG/M
3300012199\|Ga0137383_10137984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1783	Open in IMG/M
3300012201\|Ga0137365_10063989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2776	Open in IMG/M
3300012204\|Ga0137374_10232833	Not Available	1559	Open in IMG/M
3300012206\|Ga0137380_11273051	Not Available	620	Open in IMG/M
3300012208\|Ga0137376_10383497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1220	Open in IMG/M
3300012210\|Ga0137378_11857190	Not Available	505	Open in IMG/M
3300012211\|Ga0137377_10018742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6068	Open in IMG/M
3300012349\|Ga0137387_10775736	Not Available	694	Open in IMG/M
3300012353\|Ga0137367_10025251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	4613	Open in IMG/M
3300012356\|Ga0137371_10253841	Not Available	1373	Open in IMG/M
3300012356\|Ga0137371_10451611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	994	Open in IMG/M
3300012358\|Ga0137368_10585260	Not Available	710	Open in IMG/M
3300012359\|Ga0137385_10198100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1754	Open in IMG/M
3300012359\|Ga0137385_10478295	Not Available	1056	Open in IMG/M
3300012360\|Ga0137375_10863647	Not Available	722	Open in IMG/M
3300012362\|Ga0137361_10661111	All Organisms → cellular organisms → Bacteria → Proteobacteria	956	Open in IMG/M
3300012362\|Ga0137361_10998832	Not Available	756	Open in IMG/M
3300012532\|Ga0137373_10665073	Not Available	780	Open in IMG/M
3300012683\|Ga0137398_10878173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	626	Open in IMG/M
3300012922\|Ga0137394_11141837	Not Available	643	Open in IMG/M
3300016294\|Ga0182041_10591837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	974	Open in IMG/M
3300016294\|Ga0182041_11002996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	755	Open in IMG/M
3300016294\|Ga0182041_11609823	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300016404\|Ga0182037_10113380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1977	Open in IMG/M
3300016744\|Ga0183099_1320618	Not Available	630	Open in IMG/M
3300018433\|Ga0066667_10200902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1465	Open in IMG/M
3300018468\|Ga0066662_10029502	All Organisms → cellular organisms → Bacteria → Proteobacteria	3231	Open in IMG/M
3300018468\|Ga0066662_10487032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1118	Open in IMG/M
3300021475\|Ga0210392_10829499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	691	Open in IMG/M
3300025910\|Ga0207684_10009807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8448	Open in IMG/M
3300025910\|Ga0207684_10020252	All Organisms → cellular organisms → Bacteria	5683	Open in IMG/M
3300025922\|Ga0207646_10017064	All Organisms → cellular organisms → Bacteria	6803	Open in IMG/M
3300025922\|Ga0207646_10396653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1246	Open in IMG/M
3300026310\|Ga0209239_1248272	Not Available	615	Open in IMG/M
3300026524\|Ga0209690_1044106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2037	Open in IMG/M
3300026552\|Ga0209577_10103164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2309	Open in IMG/M
3300026557\|Ga0179587_10506870	Not Available	792	Open in IMG/M
3300028906\|Ga0308309_10518940	Not Available	1031	Open in IMG/M
3300029636\|Ga0222749_10155480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1117	Open in IMG/M
3300031544\|Ga0318534_10827246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300031546\|Ga0318538_10561611	Not Available	619	Open in IMG/M
3300031724\|Ga0318500_10383308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300031770\|Ga0318521_10385969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300031780\|Ga0318508_1200543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300031794\|Ga0318503_10086910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300031805\|Ga0318497_10122004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1411	Open in IMG/M
3300031846\|Ga0318512_10655605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300031890\|Ga0306925_10350123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1586	Open in IMG/M
3300031910\|Ga0306923_11438369	Not Available	724	Open in IMG/M
3300031912\|Ga0306921_10149643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2731	Open in IMG/M
3300031941\|Ga0310912_10073810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2462	Open in IMG/M
3300031941\|Ga0310912_11371269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300031946\|Ga0310910_10312944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1236	Open in IMG/M
3300031946\|Ga0310910_10580987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	888	Open in IMG/M
3300032001\|Ga0306922_11899248	Not Available	583	Open in IMG/M
3300032035\|Ga0310911_10271455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	973	Open in IMG/M
3300032035\|Ga0310911_10363611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	836	Open in IMG/M
3300032035\|Ga0310911_10445897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	749	Open in IMG/M
3300032044\|Ga0318558_10198825	Not Available	977	Open in IMG/M
3300032066\|Ga0318514_10416562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	713	Open in IMG/M
3300032180\|Ga0307471_103030281	Not Available	596	Open in IMG/M
3300032180\|Ga0307471_103690874	Not Available	542	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.20%
Host-Associated	Host-Associated	1.87%
Engineered	Engineered	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.20%
Plants	Host-Associated → Plants	1.87%
Bioreactor	Engineered → Bioreactor	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%
Anaerobic	Engineered → Bioreactor → Anaerobic	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.50%
Loam	Environmental → Terrestrial → Soil → Loam	18.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.21%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Bioreactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Bioreactor	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016744	Microbial communities from bioreactor (seeded with anoxic lake sediment) at LBNL, California, USA - Biofuel metagenome 1	Engineered	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066823_101115301	3300005163	Soil	MFERVITAIIMVVAVAIVASGLPLSSISDAGPGALGFFNHTIVF*
Ga0066683_100157875	3300005172	Soil	MFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF*
Ga0066680_101723253	3300005174	Soil	MFERVITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF*
Ga0066690_100654714	3300005177	Soil	MFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNPIF*
Ga0066675_105488151	3300005187	Soil	MFERLITAIIMVVAVAIVASGLPLSSISDAGSGALGFFNHTIVF*
Ga0066388_1012720852	3300005332	Tropical Forest Soil	MFERVITAIVIVVAVAIVASGLPLSSISGAGSGALGFFNLPPIF*
Ga0066388_1048168891	3300005332	Tropical Forest Soil	MFERLITAIIMVVAVAIVASGLPLSAISSAGSEALGFFDLPLIF*
Ga0070708_1004517681	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	DDQEGKIMFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF*
Ga0066689_106432203	3300005447	Soil	MFERVITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSP
Ga0070707_1002849724	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	EGKIMFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF*
Ga0070707_1009607371	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MFERVITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPI
Ga0070707_1013674831	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	IMFERVITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF*
Ga0070698_1015671362	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MFERVITAIIMVVAVAIVASGLPLSSISGASSGAVGLFNLPPIF*
Ga0066701_101179633	3300005552	Soil	MFERVITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNHTTVF*
Ga0066701_105664651	3300005552	Soil	MFERLITAIIMVVAIVASGLPLSSISDAGSGALGFFNHTIVF*
Ga0066704_105677452	3300005557	Soil	MVVALAIVASGLPLSSISGAGSGILGFFNLPLIF*
Ga0066905_1020186201	3300005713	Tropical Forest Soil	TAIIMVVAVAIVASGLPLSSISSAGSEALGFFNLPLIF*
Ga0066905_1021884982	3300005713	Tropical Forest Soil	MFERVITAIIIVVAVAIVASGLPLSSISGAGSGALGFFNLPPIF*
Ga0066903_1005995058	3300005764	Tropical Forest Soil	MFKRVITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSP
Ga0066903_1053295352	3300005764	Tropical Forest Soil	MFERLITATIMVVAVAIVASGLPLSSISSAGSEALGFFNLPLIF*
Ga0066903_1074876951	3300005764	Tropical Forest Soil	MLERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLS
Ga0066903_1089744091	3300005764	Tropical Forest Soil	IIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF*
Ga0081455_103027722	3300005937	Tabebuia Heterophylla Rhizosphere	MFERLITAIIIVVAVAIVASGLPLSSISGAGSGVLGFFNLPPIF*
Ga0070717_100874752	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MFERVITAIIMVVAVAIVASGLPLSSISGVGSGALGFFNHTTVF*
Ga0070765_1017166611	3300006176	Soil	KIMFERVITAIIMVVAVAIVASGLPLSSISGATSGAVGLFNLPPIF*
Ga0066658_104621782	3300006794	Soil	MFERLITAIIMVVALAIVASGLPLSSISGAGSGILGFFNLPLIF*
Ga0066660_101203623	3300006800	Soil	MFERVITAIIMVVAVAIVASGLPLSSISGAGSGALGSFNLSPIF*
Ga0075425_1002398185	3300006854	Populus Rhizosphere	IMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF*
Ga0099791_105177891	3300007255	Vadose Zone Soil	REILTKGKNKMIERLITIIMVLLAFSIAASGLPLSSISGAGSGAIGFLNLPLIF*
Ga0066710_1021379763	3300009012	Grasslands Soil	MFERLITAIIMVVAIVASGLPLSSISDAGSGALGFFNHTIVF
Ga0066710_1026608362	3300009012	Grasslands Soil	MFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLPLIF
Ga0126384_120379572	3300010046	Tropical Forest Soil	MFERVITAIIMVVVVAIVASGLPLSSISGAGSGVGFFNLSPIF*
Ga0126382_113994401	3300010047	Tropical Forest Soil	MFERLITAIIMVVAVAIVASGLPLSSISSAGSEALGFFNLPLIF*
Ga0126382_122881641	3300010047	Tropical Forest Soil	IIIVVAVAIVASGLPLSSISGAGSGALGFFNLPPIF*
Ga0126382_124900542	3300010047	Tropical Forest Soil	MFERVITAIIIVVAVAIVASGLPLSSISGAGSGALGFF
Ga0134063_102747422	3300010335	Grasslands Soil	MFERVITAIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF*
Ga0126372_104657484	3300010360	Tropical Forest Soil	LITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNFSPIF*
Ga0126377_125362761	3300010362	Tropical Forest Soil	YAAVARPKGKIMFERLITAIIMVVAVAIVASGLPLSSISSAGSEALGFFNLPLIF*
Ga0126379_100921373	3300010366	Tropical Forest Soil	MFERVITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLPPIF*
Ga0126383_106547813	3300010398	Tropical Forest Soil	MFERLITAIIMVVAVAIVASGLPLSSISGAGSGTLGFFNLSPIF*
Ga0137389_103955394	3300012096	Vadose Zone Soil	MFERVITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNHTIVF*
Ga0137388_109157391	3300012189	Vadose Zone Soil	MFERLITAIIMVVAIVASVLPLSSISDAGSGALGFFNHTIVF*
Ga0137364_102187341	3300012198	Vadose Zone Soil	MFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLPLIF*
Ga0137364_106192462	3300012198	Vadose Zone Soil	TAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF*
Ga0137383_100531125	3300012199	Vadose Zone Soil	MFERVITAIIMVVAVAIVASGLPLSSISGAGSGAFGFFNHAIVF*
Ga0137383_101379841	3300012199	Vadose Zone Soil	MFERLITAIIMVVAVAIVASGLPLYSISGAGSGVLGFFNLAVIF*
Ga0137365_100639893	3300012201	Vadose Zone Soil	MFERVITAIIMVVAVAIVASGLPLSSISGAGSGAFGFFNHTIVF*
Ga0137374_102328332	3300012204	Vadose Zone Soil	MFERVITAIIMVVAVAIVASGLPLSSISGAGSGAFGFINHTIVF*
Ga0137380_112730511	3300012206	Vadose Zone Soil	SFYKVCDDQKGEIMFERLITAIIMVVAVAIGAGSGALGFVNHTIVF*
Ga0137376_103834971	3300012208	Vadose Zone Soil	KIMFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF*
Ga0137378_118571901	3300012210	Vadose Zone Soil	AAVARPKGKIMFERLITAIIMVVAVAIVASGLPLYSISGAGSGVLGFFNLAVIF*
Ga0137377_100187421	3300012211	Vadose Zone Soil	MFERVITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNHTTV
Ga0137387_107757361	3300012349	Vadose Zone Soil	RPKGKIMFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLPLIF*
Ga0137367_100252515	3300012353	Vadose Zone Soil	MFERLITAIIMVVAVAIVASGLPLSSISGAGSGVLGFFNLALIF*
Ga0137371_102538412	3300012356	Vadose Zone Soil	MFERLITAIIMVVAVAIVASGLPLSSISGAGYGALGFFNLPLIF*
Ga0137371_104516113	3300012356	Vadose Zone Soil	ARPKGKIMFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF*
Ga0137368_105852601	3300012358	Vadose Zone Soil	MFERLITVIIMVVAVAIVASGLPLSSISGAGSGAIGFFNHTTVF*
Ga0137385_101981001	3300012359	Vadose Zone Soil	GKIMFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF*
Ga0137385_104782952	3300012359	Vadose Zone Soil	MFERLITAIIMVVAVAIVALGLPLSSISGAGSGALGFFNHTTVF*
Ga0137375_108636471	3300012360	Vadose Zone Soil	KIMFERVITAIIMVVAVAIVASGLPLSSISGAGSGAFGFINHTIVF*
Ga0137361_106611111	3300012362	Vadose Zone Soil	IMFERVITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNHTTVF*
Ga0137361_109988321	3300012362	Vadose Zone Soil	MTQRIVTAAIILVAVAIVASGFPLPSISGAGSGVLGFFNLSLVF*
Ga0137373_106650731	3300012532	Vadose Zone Soil	MFERLITAIIMVVSVAIVASGLPLSSISGAGSGAFGFINHTIVF*
Ga0137398_108781732	3300012683	Vadose Zone Soil	LITAIIMVVAVAIVASGLPLSSISSAGSEALGFFNLPLIF*
Ga0137394_111418372	3300012922	Vadose Zone Soil	MFERLITAIIMVVAVAIVASGLPLSSISSAGSEARGFFNLPLIF*
Ga0182041_105918371	3300016294	Soil	MFERLITAIIMVVAVAIVASGLPLSSISGAGSGALG
Ga0182041_110029962	3300016294	Soil	QEGKIMFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0182041_116098231	3300016294	Soil	EGKIMFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0182037_101133802	3300016404	Soil	MLERVITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0183099_13206182	3300016744	Bioreactor	MFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLPPIF
Ga0066667_102009021	3300018433	Grasslands Soil	KLMFERLITAIIMVVAIVASGLPLSSISDAGSGALGFFNHTIVF
Ga0066662_100295022	3300018468	Grasslands Soil	MFERVITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNHTTVF
Ga0066662_104870324	3300018468	Grasslands Soil	CDDQEGKIMFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0210392_108294991	3300021475	Soil	MFERLITAIIMVVAVAIVASGLPLSSISRAGSEALGFFNLPLIF
Ga0207684_100098079	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0207684_1002025213	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MFERVITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0207646_100170641	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFN
Ga0207646_103966535	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LEGKIMFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0209239_12482722	3300026310	Grasslands Soil	CDQERKIMFERLITAIIMVVALAIVASGLPLSSISGAGSGILGFFNLPLIF
Ga0209690_10441064	3300026524	Soil	MFERLITAIIMVVAVAIVASGLPLSSISGAGSGAL
Ga0209577_101031641	3300026552	Soil	MFERVITAIIMVVAVAIVASGLPLSSISGAGSGALGSFNLSPIF
Ga0179587_105068701	3300026557	Vadose Zone Soil	MFERVITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNL
Ga0308309_105189402	3300028906	Soil	MFERVITAIIMVVAVAIVASGLPLSSISGATSGAVGLFNLPPIF
Ga0222749_101554802	3300029636	Soil	MFERVITAIIMVVAVAIVASGLPLSSISRAGSEALGFFNLPLIF
Ga0318534_108272461	3300031544	Soil	YNVCDDQEGKIMFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0318538_105616111	3300031546	Soil	MFERVITAIIMVVAVAIVASGLPLSSISGAGSGALGFFRE
Ga0318500_103833082	3300031724	Soil	IMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0318521_103859691	3300031770	Soil	FERVITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0318508_12005432	3300031780	Soil	AIIMLVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0318503_100869102	3300031794	Soil	MFERLITATIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0318497_101220041	3300031805	Soil	MFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGF
Ga0318512_106556051	3300031846	Soil	RLITAIIMVVAVAILASGLPLSSISGAGSGALGFFNLSPIF
Ga0306925_103501233	3300031890	Soil	MFERLITAIIMVVAVAILASGLPLSSISGAGSGALGFFNLSPIF
Ga0306923_114383691	3300031910	Soil	MAMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0306921_101496431	3300031912	Soil	AIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0310912_100738106	3300031941	Soil	IIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0310912_113712691	3300031941	Soil	DQEGKIMFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0310910_103129444	3300031946	Soil	RIMFERVITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0310910_105809872	3300031946	Soil	IMFERMITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0306922_118992482	3300032001	Soil	MFERVITAIIMVVAVAIVASGLPLSSISGAGSGALGFFREPRTIL
Ga0310911_102714552	3300032035	Soil	IMFERVITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0310911_103636113	3300032035	Soil	IMVVAVAILASGLPLSSISGAGSGALGFFNLSPIF
Ga0310911_104458971	3300032035	Soil	KIMFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0318558_101988251	3300032044	Soil	GKIMFERLITAIIMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0318514_104165622	3300032066	Soil	FERLITAITMVVAVAIVASGLPLSSISGAGSGALGFFNLSPIF
Ga0307471_1030302811	3300032180	Hardwood Forest Soil	KIMFERVITAIIMVVAVAIVASGLPLSSISGVGSGALGFFNHTTVF
Ga0307471_1036908742	3300032180	Hardwood Forest Soil	MFERVITAIIMVVAVAIVASGLPLSSISGAGSGAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092386

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences