Basic Information | |
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Family ID | F092520 |
Family Type | Metagenome |
Number of Sequences | 107 |
Average Sequence Length | 55 residues |
Representative Sequence | MRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELKQKQLPAYDKKETKAY |
Number of Associated Samples | 86 |
Number of Associated Scaffolds | 107 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 73.83 % |
% of genes near scaffold ends (potentially truncated) | 23.36 % |
% of genes from short scaffolds (< 2000 bps) | 85.05 % |
Associated GOLD sequencing projects | 80 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.60 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (87.850 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere (9.346 % of family members) |
Environment Ontology (ENVO) | Unclassified (38.318 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (30.841 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 45.68% β-sheet: 0.00% Coil/Unstructured: 54.32% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.60 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 107 Family Scaffolds |
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PF04392 | ABC_sub_bind | 2.80 |
PF08483 | Obsolete Pfam Family | 1.87 |
PF00326 | Peptidase_S9 | 1.87 |
PF00072 | Response_reg | 0.93 |
PF06411 | HdeA | 0.93 |
PF00155 | Aminotran_1_2 | 0.93 |
PF13660 | DUF4147 | 0.93 |
PF13586 | DDE_Tnp_1_2 | 0.93 |
PF09084 | NMT1 | 0.93 |
PF00011 | HSP20 | 0.93 |
PF04773 | FecR | 0.93 |
PF02371 | Transposase_20 | 0.93 |
PF02195 | ParBc | 0.93 |
PF07536 | HWE_HK | 0.93 |
PF14534 | DUF4440 | 0.93 |
PF05128 | DUF697 | 0.93 |
PF02518 | HATPase_c | 0.93 |
PF13505 | OMP_b-brl | 0.93 |
PF13185 | GAF_2 | 0.93 |
PF03734 | YkuD | 0.93 |
COG ID | Name | Functional Category | % Frequency in 107 Family Scaffolds |
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COG2984 | ABC-type uncharacterized transport system, periplasmic component | General function prediction only [R] | 2.80 |
COG0071 | Small heat shock protein IbpA, HSP20 family | Posttranslational modification, protein turnover, chaperones [O] | 0.93 |
COG0715 | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | Inorganic ion transport and metabolism [P] | 0.93 |
COG1376 | Lipoprotein-anchoring transpeptidase ErfK/SrfK | Cell wall/membrane/envelope biogenesis [M] | 0.93 |
COG3034 | Murein L,D-transpeptidase YafK | Cell wall/membrane/envelope biogenesis [M] | 0.93 |
COG3547 | Transposase | Mobilome: prophages, transposons [X] | 0.93 |
COG3768 | Uncharacterized membrane protein YcjF, UPF0283 family | Function unknown [S] | 0.93 |
COG3920 | Two-component sensor histidine kinase, HisKA and HATPase domains | Signal transduction mechanisms [T] | 0.93 |
COG4251 | Bacteriophytochrome (light-regulated signal transduction histidine kinase) | Signal transduction mechanisms [T] | 0.93 |
COG4521 | ABC-type taurine transport system, periplasmic component | Inorganic ion transport and metabolism [P] | 0.93 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 87.85 % |
Unclassified | root | N/A | 12.15 % |
Visualization |
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Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
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2067725004|GPKC_F5V46DG02DE95M | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 503 | Open in IMG/M |
2228664021|ICCgaii200_c0859165 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 804 | Open in IMG/M |
3300000559|F14TC_105656082 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 667 | Open in IMG/M |
3300000787|JGI11643J11755_11756954 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 602 | Open in IMG/M |
3300000787|JGI11643J11755_11764656 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 640 | Open in IMG/M |
3300000953|JGI11615J12901_10597430 | Not Available | 677 | Open in IMG/M |
3300001431|F14TB_101527257 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 1544 | Open in IMG/M |
3300001605|Draft_10023763 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 5711 | Open in IMG/M |
3300001605|Draft_10191341 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1249 | Open in IMG/M |
3300002856|draft_11207599 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A | 503 | Open in IMG/M |
3300002856|draft_11516675 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 4745 | Open in IMG/M |
3300003994|Ga0055435_10025929 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 1283 | Open in IMG/M |
3300003995|Ga0055438_10084336 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 877 | Open in IMG/M |
3300004006|Ga0055453_10265472 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 548 | Open in IMG/M |
3300004009|Ga0055437_10014865 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 1722 | Open in IMG/M |
3300004062|Ga0055500_10150380 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 551 | Open in IMG/M |
3300004157|Ga0062590_101412032 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 693 | Open in IMG/M |
3300004463|Ga0063356_101376056 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 1037 | Open in IMG/M |
3300004479|Ga0062595_101952004 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 565 | Open in IMG/M |
3300004643|Ga0062591_100190378 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 1492 | Open in IMG/M |
3300004643|Ga0062591_102666644 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 528 | Open in IMG/M |
3300005093|Ga0062594_102669128 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 552 | Open in IMG/M |
3300005183|Ga0068993_10151538 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 782 | Open in IMG/M |
3300005331|Ga0070670_101892164 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 549 | Open in IMG/M |
3300005436|Ga0070713_101650840 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 622 | Open in IMG/M |
3300005511|Ga0077121_10227091 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 1461 | Open in IMG/M |
3300005529|Ga0070741_10389576 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1283 | Open in IMG/M |
3300005537|Ga0070730_10543540 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 744 | Open in IMG/M |
3300006041|Ga0075023_100014424 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 2102 | Open in IMG/M |
3300006047|Ga0075024_100754256 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 540 | Open in IMG/M |
3300006174|Ga0075014_100569770 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 643 | Open in IMG/M |
3300007519|Ga0105055_10047675 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 4629 | Open in IMG/M |
3300009094|Ga0111539_10135088 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 2889 | Open in IMG/M |
3300010371|Ga0134125_11128974 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 857 | Open in IMG/M |
3300010371|Ga0134125_12750831 | Not Available | 535 | Open in IMG/M |
3300010379|Ga0136449_103087224 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 647 | Open in IMG/M |
3300010396|Ga0134126_10020676 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 8348 | Open in IMG/M |
3300010396|Ga0134126_10111119 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 3357 | Open in IMG/M |
3300010399|Ga0134127_10582685 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1144 | Open in IMG/M |
3300011119|Ga0105246_11916376 | Not Available | 569 | Open in IMG/M |
3300011419|Ga0137446_1024983 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 1242 | Open in IMG/M |
3300012493|Ga0157355_1038638 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 525 | Open in IMG/M |
3300012501|Ga0157351_1037955 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 589 | Open in IMG/M |
3300012914|Ga0157297_10399794 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 550 | Open in IMG/M |
3300012988|Ga0164306_11917491 | Not Available | 515 | Open in IMG/M |
3300014158|Ga0181521_10579179 | Not Available | 528 | Open in IMG/M |
3300014318|Ga0075351_1100237 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 624 | Open in IMG/M |
3300014320|Ga0075342_1202359 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 561 | Open in IMG/M |
3300014324|Ga0075352_1049176 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis | 989 | Open in IMG/M |
3300014968|Ga0157379_11966442 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 577 | Open in IMG/M |
3300015371|Ga0132258_10085723 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 7362 | Open in IMG/M |
3300015371|Ga0132258_11007627 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 2105 | Open in IMG/M |
3300015371|Ga0132258_11577323 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 1657 | Open in IMG/M |
3300015371|Ga0132258_12293615 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 1354 | Open in IMG/M |
3300015371|Ga0132258_13529944 | Not Available | 1071 | Open in IMG/M |
3300015372|Ga0132256_100661148 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1160 | Open in IMG/M |
3300015374|Ga0132255_100459721 | Not Available | 1864 | Open in IMG/M |
3300015374|Ga0132255_100481289 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1821 | Open in IMG/M |
3300015374|Ga0132255_101661393 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 969 | Open in IMG/M |
3300015374|Ga0132255_104820092 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei | 571 | Open in IMG/M |
3300015374|Ga0132255_105634129 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 530 | Open in IMG/M |
3300017944|Ga0187786_10513239 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 546 | Open in IMG/M |
3300017966|Ga0187776_11216888 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 565 | Open in IMG/M |
3300018029|Ga0187787_10165239 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 761 | Open in IMG/M |
3300018476|Ga0190274_11523371 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 760 | Open in IMG/M |
3300018481|Ga0190271_10199484 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga | 1990 | Open in IMG/M |
3300018481|Ga0190271_12068816 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 677 | Open in IMG/M |
3300022881|Ga0224545_1030255 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 772 | Open in IMG/M |
3300025297|Ga0209758_1152196 | Not Available | 585 | Open in IMG/M |
3300025551|Ga0210131_1040617 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 735 | Open in IMG/M |
3300025580|Ga0210138_1014767 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1585 | Open in IMG/M |
3300025891|Ga0209585_10325716 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 619 | Open in IMG/M |
3300025900|Ga0207710_10463069 | Not Available | 655 | Open in IMG/M |
3300025928|Ga0207700_11723562 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 552 | Open in IMG/M |
3300025955|Ga0210071_1022620 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 777 | Open in IMG/M |
3300025986|Ga0207658_10431212 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 1164 | Open in IMG/M |
3300026013|Ga0208534_1018777 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 516 | Open in IMG/M |
3300026088|Ga0207641_11639647 | Not Available | 645 | Open in IMG/M |
3300026088|Ga0207641_11967166 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 586 | Open in IMG/M |
3300027364|Ga0209967_1058519 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 596 | Open in IMG/M |
3300027617|Ga0210002_1076409 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 594 | Open in IMG/M |
3300027682|Ga0209971_1073742 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 829 | Open in IMG/M |
3300027819|Ga0209514_10064044 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 2410 | Open in IMG/M |
3300027848|Ga0209390_10231508 | Not Available | 1546 | Open in IMG/M |
3300027876|Ga0209974_10025409 | All Organisms → cellular organisms → Bacteria | 1960 | Open in IMG/M |
3300027894|Ga0209068_10001682 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 10996 | Open in IMG/M |
3300028787|Ga0307323_10356892 | Not Available | 524 | Open in IMG/M |
3300029990|Ga0311336_10651504 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 901 | Open in IMG/M |
3300030000|Ga0311337_10639780 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 917 | Open in IMG/M |
3300030339|Ga0311360_10696312 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 810 | Open in IMG/M |
3300031241|Ga0265325_10000004 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 347347 | Open in IMG/M |
3300031241|Ga0265325_10000049 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 80854 | Open in IMG/M |
3300031247|Ga0265340_10261152 | Not Available | 771 | Open in IMG/M |
3300032770|Ga0335085_10527479 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 1342 | Open in IMG/M |
3300032770|Ga0335085_11550512 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 688 | Open in IMG/M |
3300032783|Ga0335079_10640395 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 1117 | Open in IMG/M |
3300032896|Ga0335075_10598302 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1092 | Open in IMG/M |
3300033004|Ga0335084_10442473 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 1337 | Open in IMG/M |
3300033158|Ga0335077_12009929 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 537 | Open in IMG/M |
3300033433|Ga0326726_10002292 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 17626 | Open in IMG/M |
3300033433|Ga0326726_10008516 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 9110 | Open in IMG/M |
3300033433|Ga0326726_12000296 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 564 | Open in IMG/M |
3300033486|Ga0316624_11089893 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 723 | Open in IMG/M |
3300033513|Ga0316628_101648290 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 854 | Open in IMG/M |
3300033513|Ga0316628_102629813 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 663 | Open in IMG/M |
3300033887|Ga0334790_101991 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47 | 929 | Open in IMG/M |
3300034090|Ga0326723_0005827 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 4687 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 9.35% |
Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 8.41% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 8.41% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 5.61% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 4.67% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 4.67% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 4.67% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 4.67% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 3.74% |
Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 3.74% |
Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 3.74% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 2.80% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere | 2.80% |
Freshwater | Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater | 1.87% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 1.87% |
Unplanted Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil | 1.87% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 1.87% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 1.87% |
Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil | 1.87% |
Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 1.87% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.87% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 1.87% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.87% |
Hydrocarbon Resource Environments | Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments | 1.87% |
Hydrocarbon Resource Environments | Engineered → Biotransformation → Microbial Solubilization Of Coal → Unclassified → Unclassified → Hydrocarbon Resource Environments | 1.87% |
Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 0.93% |
Groundwater | Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater | 0.93% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 0.93% |
Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 0.93% |
Arctic Peat Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil | 0.93% |
Bog | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog | 0.93% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 0.93% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.93% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.93% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.93% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.93% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
2067725004 | Soil microbial communities from Great Prairies - Kansas Corn soil | Environmental | Open in IMG/M |
2228664021 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
3300000559 | Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly | Environmental | Open in IMG/M |
3300000787 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
3300000953 | Soil microbial communities from Great Prairies - Kansas Corn soil | Environmental | Open in IMG/M |
3300001431 | Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly | Environmental | Open in IMG/M |
3300001605 | Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin | Engineered | Open in IMG/M |
3300002856 | Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Tailing Pond Surface TP_surface | Engineered | Open in IMG/M |
3300003994 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 | Environmental | Open in IMG/M |
3300003995 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 | Environmental | Open in IMG/M |
3300004006 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 | Environmental | Open in IMG/M |
3300004009 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2 | Environmental | Open in IMG/M |
3300004062 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2 | Environmental | Open in IMG/M |
3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
3300004643 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3 | Environmental | Open in IMG/M |
3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
3300005183 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 | Environmental | Open in IMG/M |
3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Host-Associated | Open in IMG/M |
3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
3300005511 | Combined assembly of arab plate scrape MF_Col (Combined Assembly) | Host-Associated | Open in IMG/M |
3300005529 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1 | Environmental | Open in IMG/M |
3300005537 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 | Environmental | Open in IMG/M |
3300006041 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 | Environmental | Open in IMG/M |
3300006047 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 | Environmental | Open in IMG/M |
3300006174 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014 | Environmental | Open in IMG/M |
3300007519 | Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03 | Environmental | Open in IMG/M |
3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
3300010379 | Sb_50d combined assembly | Environmental | Open in IMG/M |
3300010396 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2 | Environmental | Open in IMG/M |
3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
3300011419 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2 | Environmental | Open in IMG/M |
3300012493 | Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610 | Environmental | Open in IMG/M |
3300012501 | Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610 | Environmental | Open in IMG/M |
3300012914 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2 | Environmental | Open in IMG/M |
3300012988 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG | Environmental | Open in IMG/M |
3300014158 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG | Environmental | Open in IMG/M |
3300014318 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd | Environmental | Open in IMG/M |
3300014320 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1 | Environmental | Open in IMG/M |
3300014324 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1 | Environmental | Open in IMG/M |
3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300017944 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG | Environmental | Open in IMG/M |
3300017966 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG | Environmental | Open in IMG/M |
3300018029 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG | Environmental | Open in IMG/M |
3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
3300018481 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T | Environmental | Open in IMG/M |
3300022881 | Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24 | Environmental | Open in IMG/M |
3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) | Host-Associated | Open in IMG/M |
3300025551 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 (SPAdes) | Environmental | Open in IMG/M |
3300025580 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes) | Environmental | Open in IMG/M |
3300025891 | Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes) | Environmental | Open in IMG/M |
3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025955 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2 (SPAdes) | Environmental | Open in IMG/M |
3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026013 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1 (SPAdes) | Environmental | Open in IMG/M |
3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300027364 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) | Host-Associated | Open in IMG/M |
3300027617 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) | Host-Associated | Open in IMG/M |
3300027682 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) | Host-Associated | Open in IMG/M |
3300027819 | Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes) | Environmental | Open in IMG/M |
3300027848 | Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01 (SPAdes) | Environmental | Open in IMG/M |
3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) | Host-Associated | Open in IMG/M |
3300027894 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes) | Environmental | Open in IMG/M |
3300028787 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381 | Environmental | Open in IMG/M |
3300029990 | I_Fen_N2 coassembly | Environmental | Open in IMG/M |
3300030000 | I_Fen_N3 coassembly | Environmental | Open in IMG/M |
3300030339 | III_Bog_N1 coassembly | Environmental | Open in IMG/M |
3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Host-Associated | Open in IMG/M |
3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Host-Associated | Open in IMG/M |
3300032770 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5 | Environmental | Open in IMG/M |
3300032783 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3 | Environmental | Open in IMG/M |
3300032896 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4 | Environmental | Open in IMG/M |
3300033004 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4 | Environmental | Open in IMG/M |
3300033158 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1 | Environmental | Open in IMG/M |
3300033433 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN | Environmental | Open in IMG/M |
3300033486 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A | Environmental | Open in IMG/M |
3300033513 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C | Environmental | Open in IMG/M |
3300033887 | Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1 | Environmental | Open in IMG/M |
3300034090 | Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
GPKC_07285160 | 2067725004 | Soil | MRRIIQANIDRLKVLLKTEPIRQSGAMEARLLAEEELKQKQLPAYDKKETKAFN |
ICCgaii200_08591653 | 2228664021 | Soil | MRWIIQANIDKLKELLKTETNPAKRAMEASLLAEEELKQEHLPSYDRKEAKAY |
F14TC_1056560821 | 3300000559 | Soil | LKTETDPTKRAMEAHLLAEEELKQKHLPAYDKKEPKAF* |
JGI11643J11755_117569542 | 3300000787 | Soil | MGVDMRRIVQANIDRLNKLLETETDPTKRTMERRLLVEEKTNLKKLPAYNKNEAKAY* |
JGI11643J11755_117646562 | 3300000787 | Soil | MRWIIQANIDKLKELLKTETNPAKRAMEASLLAEEELKQEHLPSYDRKEAKAY* |
JGI11615J12901_105974301 | 3300000953 | Soil | RIIQANIDRLKVLLKTETDPTKRAMEARLLAEEELKQKQLPAYDKKETKAF* |
F14TB_1015272571 | 3300001431 | Soil | MRRIIQANIDRLKELLKTETDPTKRAMEAHLLAEEELKQKHLPAYDKKEPKAF* |
Draft_100237633 | 3300001605 | Hydrocarbon Resource Environments | MRRIIQANIDRLKTLLAQETDPTKRAMELRLLAEEEAKQKGLAPYDKTEPKAF* |
Draft_101913411 | 3300001605 | Hydrocarbon Resource Environments | MRRIIQANIDRLKTLLAEETDPTKRTMELRLLAEEEAKQKELAPYDKKEPKAF* |
draft_112075991 | 3300002856 | Hydrocarbon Resource Environments | MRRIIQANIDRLKTLLAEETDPTKRTMELRLLAEEEAKQKELAPYDKKEPKAF*LTALDP |
draft_115166755 | 3300002856 | Hydrocarbon Resource Environments | MRRIIQANIDRLKVLLAQETDPTKRAMELRLLAEEEAKLKRLPPYDRKEPKAF* |
Ga0055435_100259292 | 3300003994 | Natural And Restored Wetlands | MRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELKQKQLPAYDKKETKAY* |
Ga0055438_100843361 | 3300003995 | Natural And Restored Wetlands | MRRIIQANVDRLKELLETETDPTKRAMETRLLAEEELKQKQLPAYDKKETKAY* |
Ga0055453_102654722 | 3300004006 | Natural And Restored Wetlands | MAGWEFRMRRIIQANIDRLKELLKTETDPTKRAMETRLLSEEEAKLNQLPPYNKNETKAY |
Ga0055437_100148654 | 3300004009 | Natural And Restored Wetlands | MRRIIQANIDRFKELLKTETNPTKRAMEARLLAEEELKQKHLPAYDKKETKAF* |
Ga0055500_101503802 | 3300004062 | Natural And Restored Wetlands | EFDMRRIIQANIDRFKELLKTETDPTKRAMEARLLAEEELKQKHLPAYDKKETKAF* |
Ga0062590_1014120322 | 3300004157 | Soil | MRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELKQKHLPAYDKKETKAF* |
Ga0063356_1013760562 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MSISPLEVVIMRRIIEANINRFKELLKTETDPTKRTIEMRLLAEEEAKLKELSVPGKNEPKAF* |
Ga0062595_1019520041 | 3300004479 | Soil | MRRIVQANIDRLNKLLETETDPTKRTMEIRLLAEEKAKQKKLPAYNKNEAKAY* |
Ga0062591_1001903781 | 3300004643 | Soil | MRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELKQKNLPAYDKKEIKAF* |
Ga0062591_1026666441 | 3300004643 | Soil | MRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELKQKHLPAYD |
Ga0062594_1026691281 | 3300005093 | Soil | RIIQANIDRFRDLLKTETDATKRTMEMRLLAEEEAKMKQLPAYDKKEPQAY* |
Ga0068993_101515383 | 3300005183 | Natural And Restored Wetlands | MRRIIQANIDRFKELLKTETDPTKRAMEARLLAEEELKQKHLPAYDKKETKAF* |
Ga0070670_1018921641 | 3300005331 | Switchgrass Rhizosphere | MRRIVQANIDRLNKLLETETDPTKRTMEIRLLAEEKAKQKKLPAYNKNEAK |
Ga0070713_1016508402 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | MSMRRIIQANIDRLKELLKTERDPTKRAMERRLLAEEEAKLKQPPAYDKKETKAF* |
Ga0077121_102270911 | 3300005511 | Arabidopsis Rhizosphere | MRRIIQANIDRFRDLLKTETDATKRAMEVRLLAEEEAKLEQLPAYDKKEPQAY* |
Ga0070741_103895763 | 3300005529 | Surface Soil | MRRIIQANIDRFKDLLKTETDATKQTMEKRLLAEEEVKLKHLPAHDEKEPQAY* |
Ga0070730_105435402 | 3300005537 | Surface Soil | MRSIIQANIDRFKELLKAEADATKRAMELRLLVEEEAKLKKLPADKKNEPRAY* |
Ga0075023_1000144242 | 3300006041 | Watersheds | MRRIIQANIDRLKELLKTEPDPTKRVMERRLLAEEEAKLKQLPAYDKQEPKAY* |
Ga0075024_1007542563 | 3300006047 | Watersheds | IQANIDRLKELLKTETDPTKRAMERRLLAEEEAKKNQLSAYDKKETKAY* |
Ga0075014_1005697702 | 3300006174 | Watersheds | MRRIIQANIDRLKELLKRETDPTKRAMERRLLAEEEAKKNQLSAYDKKETKAY* |
Ga0105055_100476756 | 3300007519 | Freshwater | MRRIIQANVDRLKELLKTETNPTKRAMETRLLAEEGAKLKQLPAYEKNEIRAY* |
Ga0111539_101350883 | 3300009094 | Populus Rhizosphere | MRRIVQANIDRLNKLLETETDPTRRTMERRLLAEEKAKRKKLPAYNKNEAKAY* |
Ga0134125_111289742 | 3300010371 | Terrestrial Soil | MGFAVRRIIQANIDRFKDLLKTETDATKRTMEKRLLAEEEEKLKQLPAYDKKESQAY* |
Ga0134125_127508311 | 3300010371 | Terrestrial Soil | MRRIIRANIDRLKELLKTETDPTKRAMEVRLLIEEELKEKQLSAYDKKQTKAY* |
Ga0136449_1030872241 | 3300010379 | Peatlands Soil | MRRIIQANIDKLQELLKTETDPTKRIMERRLLAEEEAKQKHLPAYDKNETKAY* |
Ga0134126_1002067612 | 3300010396 | Terrestrial Soil | MRSIIQANIDRFKEFLKAEANPTKRAMELRLLAEEETKLKQLPAYKKNEPRAY* |
Ga0134126_101111193 | 3300010396 | Terrestrial Soil | MRRIIRANIDRLKELLKTESDPTKRAMEARLLIEEELKEKQLPADDKKQSKAY* |
Ga0134127_105826852 | 3300010399 | Terrestrial Soil | MGFAMRRIIQANIDRFKDLLKTETDATKRTMEKRLLAEEEEKLKQLPAYDKKE |
Ga0105246_119163761 | 3300011119 | Miscanthus Rhizosphere | MRRIIQANIDRFRDLLKTETDATKRTMEMRLLAEEEAKMKQLPAYDKKEPQAY* |
Ga0137446_10249832 | 3300011419 | Soil | MRRIIQANIDRLKLLLETETDPTKRAMEIRLLAEDEAKLKLMPKFEKNEPKAF* |
Ga0157355_10386382 | 3300012493 | Unplanted Soil | MRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELKQKHLPAYDKKERKAF* |
Ga0157351_10379552 | 3300012501 | Unplanted Soil | LDFSDHKAHAFSKRKFEMRRIIQANIDRLKELLKTETDATKRAMEMHLLAEEELKQKRLPAYYKNEPKAY* |
Ga0157297_103997941 | 3300012914 | Soil | ANIDRLKELLKTETDPTKRAMEARLLAEEELKQKHLPAYDKKETKAF* |
Ga0164306_119174911 | 3300012988 | Soil | FTMRRIIQANIDRFRDLLKTETDATKRTMEMRLLAEEEAKMKQLPAYDKKEPRAY* |
Ga0181521_105791791 | 3300014158 | Bog | MRRIIQANIDKLKELLKTETDPTKRIMERRLLAEEEAKQKHLPAYDKNETKAY* |
Ga0075351_11002371 | 3300014318 | Natural And Restored Wetlands | LKTETDPTKRAMEARLLAEEELKQKHLPAYDKKETKAY* |
Ga0075342_12023591 | 3300014320 | Natural And Restored Wetlands | MRRIIQTNIDRFKELLKTETDPTKRAMEARLLAEEELKQKHLPAYDKKETKAF* |
Ga0075352_10491761 | 3300014324 | Natural And Restored Wetlands | ECTCCGGPWEFDMRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELKQKQLPAYDKKETKAY* |
Ga0157379_119664422 | 3300014968 | Switchgrass Rhizosphere | MHRIIQANIDRFKDLLKTEADPTKQTMEMRLLAEEEARLKQLDASDKKEPKAF* |
Ga0132258_100857234 | 3300015371 | Arabidopsis Rhizosphere | MRRIIQANIDRLKKLLETETDPTKRAMETRLLAEEEAKQKQLRAYDKNETKAF* |
Ga0132258_110076271 | 3300015371 | Arabidopsis Rhizosphere | ANIDRFIELLSTETDATKRTMEKRLLAEEEAKLKQLLAYDKKERQAY* |
Ga0132258_115773231 | 3300015371 | Arabidopsis Rhizosphere | RGWEINLRRIIQANIDRFKELLKSETDSAKRKMEERLLAAEELKLKQLPPYDKNEPKAY* |
Ga0132258_122936151 | 3300015371 | Arabidopsis Rhizosphere | LRRIIQANIDKFKGLLKTETDPTKRAMEERLLAEEELKLKEMPPYNKNETKAY* |
Ga0132258_135299441 | 3300015371 | Arabidopsis Rhizosphere | MRRIIQANIDRFIELLSTETDATKRTMEKRLLAEEEAKLKQLPAYDKKE |
Ga0132256_1006611482 | 3300015372 | Arabidopsis Rhizosphere | MRRIIQANIDRFIELLSTETDATKRTMEKRLLAEEEAKLKQLPAHDNKEPKAY* |
Ga0132255_1004597212 | 3300015374 | Arabidopsis Rhizosphere | MPLDIAALEAQPASTLRREREFDLRRIIQANIDRFKKLLETETDPTKRAMERRLLVEEKAKQKQLPPYDKNETKAY* |
Ga0132255_1004812891 | 3300015374 | Arabidopsis Rhizosphere | KRKFEMRRIIQANIDRLKELLKTETDATKRAMEMHLLAEEELKQKRLPAYYKNEPKAY* |
Ga0132255_1016613932 | 3300015374 | Arabidopsis Rhizosphere | MRRIIQANIDRFIELLSTETDATKRTMEKRLLAEEEAKLKQLPAYDKKERQAY* |
Ga0132255_1048200922 | 3300015374 | Arabidopsis Rhizosphere | CSTLRREREFDLRRIIQANIDRFKKLLETETDPTKRAMESRLLAEEEAKQEQLPPYDKNETKAY* |
Ga0132255_1056341291 | 3300015374 | Arabidopsis Rhizosphere | NIDRLKELLKTETDPTKRALETRLLAEEEAKKKDLPPYDKNEKKAY* |
Ga0187786_105132392 | 3300017944 | Tropical Peatland | MCKGGDPEFDMRRIIQANIDRLKTLLETEADPTKRAMETRLLNEEELKLKQLLADPKNETKAY |
Ga0187776_112168882 | 3300017966 | Tropical Peatland | MCKGGDPEFDMRRIIQANIDRLKTLLETEADPTKRAMETRLLKEEEFKLKQLLADPKNETKAY |
Ga0187787_101652392 | 3300018029 | Tropical Peatland | MFNGGDPEFDMRRIIQANIDRLKTLLETEADPTKRAMETRLLNEEELKLKQLLADPKNETKAY |
Ga0190274_115233711 | 3300018476 | Soil | MRSIIQANIDRFKDLLKTETDATKQAMEKRLLAAEEAKLKQLLANDKKEPQAY |
Ga0190271_101994841 | 3300018481 | Soil | MLEMRRIIQANINRFKDLLKTETDATKQAMEKRLLAAEEAKLKQLLANDKKEPQAY |
Ga0190271_120688161 | 3300018481 | Soil | MRRIIQANIDRFEELLKTESNPTKRAMELRLLAEEKAKLEKLPPYDKNEAKAY |
Ga0224545_10302553 | 3300022881 | Soil | MRRIIQANIDRLKELLKAESDPTKRIMERRLLAEEEAKQKHLPAYDKNETKAY |
Ga0209758_11521962 | 3300025297 | Arabidopsis Rhizosphere | MRRIIQANIDRFRDLLKTETDATKRAMEVRLLAEEEAKLEQLPAYDKKEPQAY |
Ga0210131_10406171 | 3300025551 | Natural And Restored Wetlands | MRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELKQKQLPAYDKKETKAY |
Ga0210138_10147672 | 3300025580 | Natural And Restored Wetlands | MRRIIQTNIDRFKELLKTETDPTKRAMEARLLAEEELKQKHLPAYDKKETKAF |
Ga0209585_103257161 | 3300025891 | Arctic Peat Soil | EWEFDVRRIIQANIDRLKELLKSETDTTKRAMEMGLLAEEEAKMNQLLQYNKKETKAY |
Ga0207710_104630692 | 3300025900 | Switchgrass Rhizosphere | DWVMWQGWEINLRRIIQANIDRFKELLKSETDPAKRKMEARLLAAEELKLEQLPPYDKNETKAY |
Ga0207700_117235622 | 3300025928 | Corn, Switchgrass And Miscanthus Rhizosphere | MSMRRIIQANIDRLKELLKTERDPTKRAMERRLLAEEEAKLKQPPAYDKKETKAF |
Ga0210071_10226202 | 3300025955 | Natural And Restored Wetlands | MRRIIQANIDRFKELLKTETDPTKRAMEARLLAEEELKQKHLPAYDKKETKAF |
Ga0207658_104312122 | 3300025986 | Switchgrass Rhizosphere | MRRIVQANIDRLNKLLETETDPTKRTMEIRLLAEEKAKQKKLPAYNKNEAKAY |
Ga0208534_10187772 | 3300026013 | Natural And Restored Wetlands | MRRIIQANIDRFKELLKTETNPTKRAMEARLLAEEELKQKHLPAYDKKETKAF |
Ga0207641_116396471 | 3300026088 | Switchgrass Rhizosphere | RIIQANIDRFKELLKSETDPAKRKMEARLLAAEELKLEQLPPYDKDETKAY |
Ga0207641_119671662 | 3300026088 | Switchgrass Rhizosphere | LRRIIQANIDRFKKLLETETDPTKRAMERRLLAEEKAKQKQLPPYDKNETKAY |
Ga0209967_10585192 | 3300027364 | Arabidopsis Thaliana Rhizosphere | MRRIVQANIDRLNKLLETETDPTKRTMERRLLVEEKANLKKLPAYNKNEAKAY |
Ga0210002_10764092 | 3300027617 | Arabidopsis Thaliana Rhizosphere | MRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELRQKNLPAYDRKEIKAF |
Ga0209971_10737422 | 3300027682 | Arabidopsis Thaliana Rhizosphere | MRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELKQKNLPAYDKKEIKAY |
Ga0209514_100640444 | 3300027819 | Groundwater | MRRIIQANIDRFEELLKTETDPTKRAMELRLLAEEKAKLERLPPFDKNEAKAY |
Ga0209390_102315082 | 3300027848 | Freshwater | MRRIIQANVDRLKELLKTETNPTKRAMETRLLAEEGAKLKQLPAYEKNEIRAY |
Ga0209974_100254092 | 3300027876 | Arabidopsis Thaliana Rhizosphere | MRWIIQANIDKLKELLKTETNPAKRAMEASLLAEEELKQEHLPTYDRKEAKAY |
Ga0209068_100016823 | 3300027894 | Watersheds | MRRIIQANIDRLKELLKTEPDPTKRVMERRLLAEEEAKLKQLPAYDKQEPKAY |
Ga0307323_103568922 | 3300028787 | Soil | RIIQANIDRFRDLLKTETDATKRIMEMRLLAEEEAKLKQLPAYDKKEPQSFLN |
Ga0311336_106515041 | 3300029990 | Fen | MRRIIQANIDRFKELLQTETDPTKRVMELRLLAEEEDKQKKLPPYDAKEPKAF |
Ga0311337_106397803 | 3300030000 | Fen | MRRIIQANIDRFEEMLKTEADPTKRAMEMRLLAEEKAKLKMLPPFHKDEVKAY |
Ga0311360_106963121 | 3300030339 | Bog | MRRIIQANIDRFKELLQTETDPTKRVMELRLLAEEEDKQKKLPPYNAKEPKAF |
Ga0265325_10000004153 | 3300031241 | Rhizosphere | MRRIIQANIDRLKELLKTEPDPTKHVMERRLLAEEEAKLKQLPAYDKKEPKAY |
Ga0265325_1000004939 | 3300031241 | Rhizosphere | MVLFMLRQEWEFDLRRIIQANIDRLKELLKTELEPTKRAMERRLLAEEEAKLKQLPAYDKKETRAY |
Ga0265340_102611521 | 3300031247 | Rhizosphere | PAAAREKALPVRTIIQANIDRFKELLKMETDPTKRAMEMRLLAEEEAKQKQLFAFDRKEA |
Ga0335085_105274794 | 3300032770 | Soil | MRRIIQANIDRLKQLLKTETDPTKRAMEARLLAEEELKQKHLPAYDKNETKAF |
Ga0335085_115505122 | 3300032770 | Soil | VSLLRRDWEFDLRRIIQANIDRLKGLLKTETDPTKRAMEARLLAEEELKLKQLPAYDKNETKAC |
Ga0335079_106403951 | 3300032783 | Soil | MRGIIQANIARFKELLKTETDPTKRAMEKRLLAEEEAKEKHLPVDATKETKAY |
Ga0335075_105983022 | 3300032896 | Soil | MRRIIQANIDRFRDLLKIETDETKRTMEMRLLAEEEAKLKKLPAKGKNVPKALSS |
Ga0335084_104424733 | 3300033004 | Soil | VSLLRRDWEFDLRRIIQANIDRLKGLLKTETDPTKRAMEARLLAEEELKLKQLPAYDKNETKAY |
Ga0335077_120099292 | 3300033158 | Soil | VSLLRRDWEFDLRRIIQANIDRLKGLLKTETDPTKRAMEERLLAEEELKLKEMPPYNKKETKAY |
Ga0326726_1000229214 | 3300033433 | Peat Soil | MLRREWEFDLRRIIQANIDRLKELLKTETDPTKRAMERRLLAEEEAKQKQLPAYDKNETKAY |
Ga0326726_100085167 | 3300033433 | Peat Soil | MRRIIQANIDRLKELLKTETDPTKRAMEMRLLAEEEMKQKRLPAYDRNEPKAY |
Ga0326726_120002961 | 3300033433 | Peat Soil | DSCDHNGAHFYRERKFDMRRIIQANIDRLKELLKTETDPTKRAMEVQLLAEEELKRKQLVAYGNEPKAY |
Ga0316624_110898931 | 3300033486 | Soil | MRRIIQANIDRLKELLKTETDPTKRTMERRLLAEEEAKQKQLPAYDKNETKAY |
Ga0316628_1016482901 | 3300033513 | Soil | MRRIIQANIDRLKALLKTETDPTKRAMEARLLAEEELKQKHLPAYDKEETKAY |
Ga0316628_1026298132 | 3300033513 | Soil | MRRIIQANIDRLKELLKTETDPTKRAMEARLLAEEELKQKHLPAYDKKETKAY |
Ga0334790_101991_515_676 | 3300033887 | Soil | MRRIIQANIDRLKELLKAESDPTKRIMERRLLAEEEAKEKHLPAYDKNETKAY |
Ga0326723_0005827_4065_4253 | 3300034090 | Peat Soil | MGRRERKFDMRRIIQANIDRLKELLKTETDPTKRAMEMRLLAEEEMKQKRLPAYDRNEPKAY |
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