Metagenome / Metatranscriptome Family F092602

Basic Information
Family ID	F092602
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	48 residues
Representative Sequence	MHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRSFLRSQRKVTS
Number of Associated Samples	87
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	41.41 %
% of genes near scaffold ends (potentially truncated)	62.62 %
% of genes from short scaffolds (< 2000 bps)	74.77 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Most Common Taxonomy
Group	Bacteria (56.075 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (34.579 % of family members)
Environment Ontology (ENVO)	Unclassified (39.252 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.991 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.79% β-sheet: 0.00% Coil/Unstructured: 59.21%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF12710	HAD	20.56
PF08281	Sigma70_r4_2	6.54
PF10431	ClpB_D2-small	1.87
PF07228	SpoIIE	1.87
PF00072	Response_reg	0.93
PF07690	MFS_1	0.93
PF02790	COX2_TM	0.93
PF03886	ABC_trans_aux	0.93
PF13533	Biotin_lipoyl_2	0.93
PF03992	ABM	0.93
PF04542	Sigma70_r2	0.93
PF16576	HlyD_D23	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.93
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.93
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.93
COG1622	Heme/copper-type cytochrome/quinol oxidase, subunit 2	Energy production and conversion [C]	0.93
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.07 %
Unclassified	root	N/A	43.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.07 %
Unclassified	root	N/A	43.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.07 %
Unclassified	root	N/A	43.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	49.53 %
Unclassified	root	N/A	43.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.93 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	38.32 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.32 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.32 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16914036	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3226	Open in IMG/M
3300001593\|JGI12635J15846_10135997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1709	Open in IMG/M
3300001593\|JGI12635J15846_10753155	Not Available	559	Open in IMG/M
3300002245\|JGIcombinedJ26739_100162467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2111	Open in IMG/M
3300002907\|JGI25613J43889_10011483	Not Available	2458	Open in IMG/M
3300002907\|JGI25613J43889_10230965	Not Available	500	Open in IMG/M
3300002914\|JGI25617J43924_10095946	Not Available	1064	Open in IMG/M
3300002917\|JGI25616J43925_10042200	All Organisms → cellular organisms → Bacteria → Acidobacteria	1995	Open in IMG/M
3300002917\|JGI25616J43925_10085963	Not Available	1311	Open in IMG/M
3300004091\|Ga0062387_101178030	Not Available	599	Open in IMG/M
3300005186\|Ga0066676_11120933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300005445\|Ga0070708_100381183	Not Available	1329	Open in IMG/M
3300005445\|Ga0070708_101334413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300005526\|Ga0073909_10202142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M
3300005544\|Ga0070686_100088612	Not Available	2065	Open in IMG/M
3300005549\|Ga0070704_102280421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300006174\|Ga0075014_100356089	Not Available	786	Open in IMG/M
3300006175\|Ga0070712_100356963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1198	Open in IMG/M
3300007265\|Ga0099794_10152774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1172	Open in IMG/M
3300007788\|Ga0099795_10050141	Not Available	1517	Open in IMG/M
3300009038\|Ga0099829_11363776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300009038\|Ga0099829_11755094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300009088\|Ga0099830_11309019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300009089\|Ga0099828_10862045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300009089\|Ga0099828_11246460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300010360\|Ga0126372_10675434	Not Available	1004	Open in IMG/M
3300010375\|Ga0105239_12812313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300010376\|Ga0126381_100392936	All Organisms → cellular organisms → Bacteria	1930	Open in IMG/M
3300010376\|Ga0126381_101332319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1038	Open in IMG/M
3300011269\|Ga0137392_10613548	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300011270\|Ga0137391_10845241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300011270\|Ga0137391_11328960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300011270\|Ga0137391_11485588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300012189\|Ga0137388_10059963	All Organisms → cellular organisms → Bacteria	3126	Open in IMG/M
3300012189\|Ga0137388_10130651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2200	Open in IMG/M
3300012189\|Ga0137388_11751944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300012202\|Ga0137363_11352722	Not Available	601	Open in IMG/M
3300012202\|Ga0137363_11431013	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300012205\|Ga0137362_10972129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300012582\|Ga0137358_10795405	Not Available	628	Open in IMG/M
3300012685\|Ga0137397_10881661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300012918\|Ga0137396_10646604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300012922\|Ga0137394_10238732	All Organisms → cellular organisms → Bacteria → Acidobacteria	1553	Open in IMG/M
3300012923\|Ga0137359_11668093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300012925\|Ga0137419_10087107	All Organisms → cellular organisms → Bacteria	2127	Open in IMG/M
3300012925\|Ga0137419_10732775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300012929\|Ga0137404_10000929	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	19301	Open in IMG/M
3300012930\|Ga0137407_11206644	Not Available	718	Open in IMG/M
3300012944\|Ga0137410_11699981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300015054\|Ga0137420_1240278	Not Available	1023	Open in IMG/M
3300019789\|Ga0137408_1028192	Not Available	1607	Open in IMG/M
3300019890\|Ga0193728_1350390	Not Available	530	Open in IMG/M
3300020140\|Ga0179590_1038062	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300020579\|Ga0210407_10324631	All Organisms → cellular organisms → Bacteria → Acidobacteria	1203	Open in IMG/M
3300020580\|Ga0210403_10094145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2425	Open in IMG/M
3300020581\|Ga0210399_10002240	All Organisms → cellular organisms → Bacteria → Acidobacteria	15065	Open in IMG/M
3300020581\|Ga0210399_10020920	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5179	Open in IMG/M
3300020581\|Ga0210399_10918224	Not Available	709	Open in IMG/M
3300021086\|Ga0179596_10186070	Not Available	1005	Open in IMG/M
3300021180\|Ga0210396_10893099	Not Available	758	Open in IMG/M
3300021363\|Ga0193699_10474165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300021407\|Ga0210383_11470703	Not Available	564	Open in IMG/M
3300021420\|Ga0210394_10669093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300021433\|Ga0210391_10108792	All Organisms → cellular organisms → Bacteria	2183	Open in IMG/M
3300021478\|Ga0210402_10679418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	952	Open in IMG/M
3300021559\|Ga0210409_11398829	Not Available	575	Open in IMG/M
3300024330\|Ga0137417_1452103	All Organisms → cellular organisms → Bacteria → Acidobacteria	2818	Open in IMG/M
3300025961\|Ga0207712_10628678	Not Available	931	Open in IMG/M
3300026341\|Ga0257151_1015516	Not Available	797	Open in IMG/M
3300026343\|Ga0209159_1207380	Not Available	619	Open in IMG/M
3300026343\|Ga0209159_1249471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300026481\|Ga0257155_1050744	Not Available	648	Open in IMG/M
3300026481\|Ga0257155_1074493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300026496\|Ga0257157_1021509	Not Available	1049	Open in IMG/M
3300026497\|Ga0257164_1036131	Not Available	759	Open in IMG/M
3300026540\|Ga0209376_1309386	Not Available	616	Open in IMG/M
3300026551\|Ga0209648_10089850	All Organisms → cellular organisms → Bacteria → Acidobacteria	2542	Open in IMG/M
3300026551\|Ga0209648_10122075	Not Available	2099	Open in IMG/M
3300026555\|Ga0179593_1163269	All Organisms → cellular organisms → Bacteria → Acidobacteria	2990	Open in IMG/M
3300027326\|Ga0209731_1008194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1337	Open in IMG/M
3300027439\|Ga0209332_1007923	All Organisms → cellular organisms → Bacteria → Acidobacteria	2157	Open in IMG/M
3300027439\|Ga0209332_1081502	Not Available	584	Open in IMG/M
3300027610\|Ga0209528_1037254	Not Available	1076	Open in IMG/M
3300027629\|Ga0209422_1148707	Not Available	526	Open in IMG/M
3300027671\|Ga0209588_1105754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M
3300027727\|Ga0209328_10151964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300027846\|Ga0209180_10552457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300027875\|Ga0209283_10898938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300028673\|Ga0257175_1126880	Not Available	510	Open in IMG/M
3300030935\|Ga0075401_11395958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1405	Open in IMG/M
3300030945\|Ga0075373_10092552	Not Available	673	Open in IMG/M
3300031474\|Ga0170818_113540935	Not Available	604	Open in IMG/M
3300031719\|Ga0306917_10747096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300031720\|Ga0307469_11082705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300031942\|Ga0310916_10124112	All Organisms → cellular organisms → Bacteria → Acidobacteria	2104	Open in IMG/M
3300031962\|Ga0307479_10852820	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300032059\|Ga0318533_10062033	Not Available	2515	Open in IMG/M
3300032180\|Ga0307471_102187511	Not Available	696	Open in IMG/M
3300032205\|Ga0307472_100705450	Not Available	908	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.20%
Host-Associated	Host-Associated	2.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.33%
Plants	Host-Associated → Plants	2.80%
Aquatic	Environmental → Aquatic	1.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.80%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Sediment	Environmental → Aquatic → Sediment	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.31%
Loam	Environmental → Terrestrial → Soil → Loam	14.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.87%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.04%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	34.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.87%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.93%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026341	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-A	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300030935	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03103780	2088090014	Soil	MSDFPSGVDVHWETQRRVVWNEQEHTREEQEFVYEISWITELGLWRTFLRSHHKVND
INPgaii200_04649161	2228664022	Soil	VRWETQPRVLWNEQEHMNEEHELVYEISRIANLVRTAWE
JGI12635J15846_101359973	3300001593	Forest Soil	MHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRSFLRSQRKVTS*
JGI12635J15846_107531551	3300001593	Forest Soil	HAGVEPHWETQRRMVWNEREHTSEERELVYEISWVEELGLWRSFLRSQRKVKS*
JGIcombinedJ26739_1001624675	3300002245	Forest Soil	HWETQRRVVWNEQEHTREEYELVYEISWIKELGLWRSFLRSRHRVKS*
JGI25613J43889_100114832	3300002907	Grasslands Soil	MHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRCFLRSQRKVTS*
JGI25613J43889_102309651	3300002907	Grasslands Soil	AGVDVHWETQRRMVWSEREHTSEEREXVYEISWVAELGLWRSFLRSQPKVKS*
JGI25617J43924_100959461	3300002914	Grasslands Soil	SGFPAGVDMHWETRRRVVWNEQEHTREERELVYEISWIKELGLWRCFLRSQRKVTS*
JGI25616J43925_100422002	3300002917	Grasslands Soil	MHWETRRRVVWNEQEHTREERELVYEISWIKELGLWRCFLRSQRKVTS*
JGI25616J43925_100859632	3300002917	Grasslands Soil	GVDVHWETQRRMVWNEREHTSEERELVFAISWVAELGXXRXFLXSQRKVKS*
Ga0062387_1011780301	3300004091	Bog Forest Soil	DGVDVHWETQRRVVWNEREHSNEEHELVYEISWIKEPGLWRTFLRSHHQVND*
Ga0066676_111209332	3300005186	Soil	WETRRRVVWNEQEHTREEHELVYEISWIKELGLWRCFLRSQRKVTS*
Ga0070708_1003811832	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VHWEMQRRVVWNEQEHTREEHDLVYEISWIKELGLWRSFLRSQRKVTS*
Ga0070708_1013344132	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	FPAGVDVHWETQRRVVWNEQEHTREEHELVYEISWINELGLWRSFLRSHHRVKS*
Ga0073909_102021421	3300005526	Surface Soil	GVDVHWETQRRVVWNEQEHTREEHELVYEISWIKELDLWRSFLRSQRKVTS*
Ga0070686_1000886122	3300005544	Switchgrass Rhizosphere	VHWETQRRVVWNEKEHTREEHELVYELSWIKELGLCRSFLRSQRKVTS*
Ga0070704_1022804212	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	GFPAGVDVHWETQRRVVWNEQEHTREEHELVYEISWIKELDLWRSFLRSQRKVTS*
Ga0070716_1004072942	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MCTWETQRRVVWNEQEHTREEHELVYEISWIKELG
Ga0075014_1003560891	3300006174	Watersheds	MHWETRRRVVWNEQERTREEQEFVYEISWIEELGQWRTFLRSHHKVSG*
Ga0070712_1003569632	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MCTWETQRRVVWNEQEHTREEHELVYEISWIKELGLWRSFLRSQHKVIG*
Ga0099794_101527741	3300007265	Vadose Zone Soil	MHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRRFLRSQRKVTS*
Ga0099795_100501411	3300007788	Vadose Zone Soil	MHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRSFLRSHHKVTS*
Ga0099829_113637762	3300009038	Vadose Zone Soil	SGFPAGVDMHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRCFLRSQRKVTS*
Ga0099829_117550942	3300009038	Vadose Zone Soil	SGFPAGVDMHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRRFLRSQRKATS*
Ga0099830_113090192	3300009088	Vadose Zone Soil	WETQRRIVWNEREHTSEERELVYEISWIAERSLWRSFLRSQRKVKS*
Ga0099828_108620451	3300009089	Vadose Zone Soil	VHWERQRRIVWNEREHTSEEREQVYEISWVAELGLWRGFLRSQRKAKS*
Ga0099828_112464601	3300009089	Vadose Zone Soil	AGVDMHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRCFLRSQRKVTS*
Ga0126372_106754341	3300010360	Tropical Forest Soil	VHWATQRRIVWNELQPTSEEFELVYEISWIAELGLWRSFLRSQRKVK
Ga0105239_128123132	3300010375	Corn Rhizosphere	GVDVHWETQRRLVWNEQEHTREEHELVYEISWIKELGLWRRFLRSQRKVTT*
Ga0126381_1003929364	3300010376	Tropical Forest Soil	VFPSGVDAHLETQRRLVWNEQEHTSEEHQFVYEISWIEQLGLWRTFLRSHHKVKG*
Ga0126381_1013323193	3300010376	Tropical Forest Soil	GFPAGVDVHWETQRRMVWNAREHTSEERECAYEISWIAELGLWRSFLRSQHKLKG*
Ga0137392_106135482	3300011269	Vadose Zone Soil	AGVDMHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRRFLRSQRKVTS*
Ga0137391_108452412	3300011270	Vadose Zone Soil	RRRVVWNEQEHTREEHELVYEISWIKELGLWRRFLRSQRKVTS*
Ga0137391_113289601	3300011270	Vadose Zone Soil	RRVVWNEQEHTREEHELVYEISWIKELGLWRSFLRSQRKAQT*
Ga0137391_114855881	3300011270	Vadose Zone Soil	QRRVVWNEQGHTREEHELVYEISWIKELGLWRSFLRSHHKVTS*
Ga0137388_100599633	3300012189	Vadose Zone Soil	VVDVHWETQRRMVWNVREHTSEARELVYEISWIAELGLWRSFLRSQRKVKS*
Ga0137388_101306514	3300012189	Vadose Zone Soil	FPAGVDMHWETRRRVVWNEQEHTREEHELVYEISWIKEFGLWRTFLRSHHKVND*
Ga0137388_117519442	3300012189	Vadose Zone Soil	ETRRRVVWNEQEHTREEHELVYEISWIKELGLWRSFLRSHHKVTS*
Ga0137363_113527221	3300012202	Vadose Zone Soil	MHWETRRRVVWNEQEHTREEHELVYEISWIEELGLWRTFLRSHHKANR*
Ga0137363_114310131	3300012202	Vadose Zone Soil	AGVDMHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRRFLRSQRKATS*
Ga0137362_109721292	3300012205	Vadose Zone Soil	RRRVVWNEQEHTREEHELVYEISWIKELGLWRCFLRSQRKAQT*
Ga0137360_118755421	3300012361	Vadose Zone Soil	MHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWR
Ga0137358_107954051	3300012582	Vadose Zone Soil	MHWETPRRVVWNEQEHTREEHELVYEISWIKELGLWRCFLRSQRKVTS*
Ga0137397_108816612	3300012685	Vadose Zone Soil	FPAGVDMHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRRFLRSQRKVTS*
Ga0137396_106466041	3300012918	Vadose Zone Soil	DMHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRRFLRSQRKATS*
Ga0137394_102387323	3300012922	Vadose Zone Soil	VLWEPQRRIVWNRQEHTHEEHEFVYEISWIGELGLWRTFLRSHHKVNG*
Ga0137359_116680932	3300012923	Vadose Zone Soil	VWNEQEHTREEHELVYEISWIKELGFWHRFLRSHHKVKS*
Ga0137419_100871072	3300012925	Vadose Zone Soil	MHWETRRRVVWNEQEHTGEEHELVYEISWIEELGLWRTFLTSHHKVNR*
Ga0137419_107327751	3300012925	Vadose Zone Soil	MHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRRFLRSQRKATS*
Ga0137404_1000092910	3300012929	Vadose Zone Soil	VWNEQEYTREEHELVYEISWIKELGLWRTFLRSHHKVND*
Ga0137407_112066441	3300012930	Vadose Zone Soil	MHWETRRRVVWNEQEHTGEEHELVYEISWIEELGLWRTFLTS
Ga0137410_116999812	3300012944	Vadose Zone Soil	HWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRRFLRSQRKVTS*
Ga0137420_12402782	3300015054	Vadose Zone Soil	HWETQRRVVWQEQEHTREEHELVYEISWIKELGLWRSFLRSHHLVKS*
Ga0137408_10281923	3300019789	Vadose Zone Soil	MHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRCFLRSQRKVTS
Ga0193728_13310261	3300019890	Soil	VHWETQRRVVWNDQEHAREEHELVYEISWIEELGLW
Ga0193728_13503901	3300019890	Soil	MHWETQRRVVWNEQEHTREEYELVYEISWIKELGLWRSFLRSHHKVKS
Ga0179590_10380622	3300020140	Vadose Zone Soil	VLWEPQRRIVWNPQEHTHEEHEFVYEISWIGELGLWRTFLRSH
Ga0210407_103246312	3300020579	Soil	MHWETHRRVVWNEQGHTREEHELVYEISWIKELGLWRSFLRSHHKVKS
Ga0210403_100941451	3300020580	Soil	APSSRGHVWNCPGVDMHWETRRRVVWNEQEHTPEEHEFVYEISWIEELGLWRSFLLSHHKVND
Ga0210399_100022404	3300020581	Soil	MHWETRRRVVWNEQEHTPEEHEFVYEISWIEELGLWRSFLLSHHKVND
Ga0210399_100209205	3300020581	Soil	VLWETQRRIVWNEREHTREEHEIVYEISWIEELGEWRTFLRSRYKVDR
Ga0210399_109182241	3300020581	Soil	VHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRSFLRSH
Ga0210401_108125172	3300020583	Soil	MHWETRSRVVWNEQEHTREEHEFVYEISWIEELGLWR
Ga0179596_101860702	3300021086	Vadose Zone Soil	TRRRVVRNEQEHTREEHELVYEISWIKELGLWRCFLRSQRKVTS
Ga0210396_108930992	3300021180	Soil	MHWETRRRIVWNEQQHTREEHEFVYEVSWIEDLGLWRTFLRSHHKVND
Ga0193699_104741652	3300021363	Soil	VDVHWATQRRVVWNDQEHAREEHERVYEISWIEELGLWRSFLRSRHKVKS
Ga0210383_114707031	3300021407	Soil	VRGEMQPRVVWNERVHMNEVPELVYEVSWIEELGLWRTFLRPHHMVKH
Ga0210394_106690931	3300021420	Soil	DMHWETRRRIVWNEQQHAREEHEFVYEVSWIEDLGLWRTFLRSHHKVND
Ga0210391_101087922	3300021433	Soil	MHWETRRRIVWNEQQHAREEHEFVYEVSWIEDLGLWRTFLRSHHKVND
Ga0210402_106794183	3300021478	Soil	RRRVVWNEQEHTREEHELVYEISWIKEFGLWRTFLRSHHKVND
Ga0210409_113988291	3300021559	Soil	MHWETRRRVVWNEQEHTREEHELVYEISWIKEFGLWRTFLRS
Ga0137417_14521034	3300024330	Vadose Zone Soil	FGLSAGVDMHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRCFLRSQRKVTS
Ga0207712_106286782	3300025961	Switchgrass Rhizosphere	RRLVWNEQEHTREEHELVYEISWIKELGLWRRFLRSQRKVTT
Ga0257151_10155161	3300026341	Soil	MHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRSFLRSHHKVKS
Ga0209159_12073801	3300026343	Soil	MHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRCFL
Ga0209159_12494712	3300026343	Soil	LDVDMHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRCFLRSQRKVTS
Ga0257155_10507442	3300026481	Soil	VHWETQRRVVWQEQEHTREEHELVYEISWIKELGLWRSFL
Ga0257155_10744931	3300026481	Soil	GFPAGVDVHWETQRRVVWQEQEHTREEHELVYEISWIKELGLWRRFLRSQRKVTS
Ga0257157_10215092	3300026496	Soil	AGVDMHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRRFLRSQRKVTS
Ga0257164_10361311	3300026497	Soil	MHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRRFLRSQRKV
Ga0209376_13093861	3300026540	Soil	MHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRCFLRSQRK
Ga0209648_100898505	3300026551	Grasslands Soil	GFPAGVDMHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRCFLRSQRKVTS
Ga0209648_101220754	3300026551	Grasslands Soil	FLAGVDVHWETQRRIVWNEREHTSEERELVYEISWVAELGLWRSFLRSQRKVKS
Ga0179593_11632692	3300026555	Vadose Zone Soil	MHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRCFLRSQRKVTR
Ga0209731_10081941	3300027326	Forest Soil	TQRRVVWNEQEHAPEEHEFVYEVSWIEDLGLWRTFLRSHHKVND
Ga0209332_10079235	3300027439	Forest Soil	HWKTQRQVVWNEQEHAREEYELVYEISWIKELGLWRSFLRSRHRVKS
Ga0209332_10815022	3300027439	Forest Soil	VHWETQRRVVWNEQEHTREEHELVYEISWIKELGLWRSFLRSH
Ga0209528_10372543	3300027610	Forest Soil	VDVHWETQRGVVWNEREHPNEEHELVYEISWIKELGLWRSFLRSRHKVKS
Ga0209422_11487071	3300027629	Forest Soil	MHWETRRRVVWNEQEHTREEHEFVYEISWIEELGLWRTFLKSYHKVNK
Ga0209588_11057541	3300027671	Vadose Zone Soil	MHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRRFLRSQRKATS
Ga0209328_101519642	3300027727	Forest Soil	GHWETQRRIVWNERVHTSEECELVYEISWVAELGLWRSFLRSQRNVKS
Ga0209180_105524572	3300027846	Vadose Zone Soil	TRRRVVWNEQEHTREEHELVYEISWIKELGLWRCFLRSQRKVTS
Ga0209283_108989382	3300027875	Vadose Zone Soil	HWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRSFLRSHHKVTS
Ga0268266_117895301	3300028379	Switchgrass Rhizosphere	VHWETQRRVVWNEREHTREEHELVYEISWINELGL
Ga0257175_11268801	3300028673	Soil	MHWETRRRVVWNEQEHTREEHELVYEISWIKELGLWRRFLRSQRKVTS
Ga0075401_113959581	3300030935	Soil	QRRVVWNEQGHTREEHELVYEISWIKELGLWRTFLRSRRKVND
Ga0075373_100925522	3300030945	Soil	RGEMQPRVVWNEGVHMNEVHELVYEVSWIEELGLWRTFLRPYHMVKH
Ga0170834_1004882461	3300031057	Forest Soil	VHWETQRRVVWNEQGHTREEHELVYEISWIKELGLW
Ga0170818_1135409352	3300031474	Forest Soil	QRRVVWNEKEHTREEHELVYEISWIKELSLWGTFLRPHHKVND
Ga0306917_107470962	3300031719	Soil	GFPAGVDVRWETQRRIVWNAREHTSEERDCAYEISWIAELGLWRSFLRSQRKVKG
Ga0307469_110827053	3300031720	Hardwood Forest Soil	QAVPQSSQFRAFSEGVDVHGETQRRMVWNEQEHAREEHELVYEISWIKELGLWRSFLRSHHKVND
Ga0307468_1008512701	3300031740	Hardwood Forest Soil	MHWETRRRIVWNEQEHTREEHELVYEISWIKELGLWR
Ga0310916_101241124	3300031942	Soil	LDTHWETVTCEVWNQHEHASEERELVYEISWIPELGTWRRFLRSQRKVKS
Ga0307479_108528202	3300031962	Hardwood Forest Soil	MHWETRRRVVWNEQEHAPEEHEFVYEVSWIEDLDLWRTFLRSHHKVND
Ga0318533_100620333	3300032059	Soil	TATLGIDPHYETEKRSVWNSEAHTNEEHEFVYEISWIPELGLWRRFLRAQRKA
Ga0307471_1021875111	3300032180	Hardwood Forest Soil	MHWETRSRVVWNEQEHTREEHEFVYEISWIEELGLRRTFL
Ga0307472_1007054502	3300032205	Hardwood Forest Soil	MSGFPVGVDVHWETQRRDIWNEQEHTREERELVYEISWIKELGLWRSFLRSHHKVTG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092602

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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