Metagenome / Metatranscriptome Family F092635

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092635
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	84 residues
Representative Sequence	LPDAASNPSPGPKSRRWTIVAAGLLLLALALVVIYTSRSAFSSPLALVVVAAIGLAALLLQLRLRKDLTTQVRAP
Number of Associated Samples	92
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.25 %
% of genes near scaffold ends (potentially truncated)	94.39 %
% of genes from short scaffolds (< 2000 bps)	76.64 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.832 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.019 % of family members)
Environment Ontology (ENVO)	Unclassified (25.234 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.748 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.60% β-sheet: 0.00% Coil/Unstructured: 53.40%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00196	GerE	42.06
PF03572	Peptidase_S41	9.35
PF10531	SLBB	4.67
PF16363	GDP_Man_Dehyd	2.80
PF01070	FMN_dh	2.80
PF00483	NTP_transferase	1.87
PF01370	Epimerase	1.87
PF11918	Peptidase_S41_N	1.87
PF11954	DUF3471	1.87
PF00313	CSD	0.93
PF03551	PadR	0.93
PF16326	ABC_tran_CTD	0.93
PF13439	Glyco_transf_4	0.93
PF12762	DDE_Tnp_IS1595	0.93
PF00383	dCMP_cyt_deam_1	0.93
PF09972	DUF2207	0.93
PF13579	Glyco_trans_4_4	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	9.35
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	2.80
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	2.80
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.93
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.93
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.83 %
Unclassified	root	N/A	26.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.83 %
Unclassified	root	N/A	26.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.83 %
Unclassified	root	N/A	26.17 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	57.01 %
Unclassified	root	N/A	26.17 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.28 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.74 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.74 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.74 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.93 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.74 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	1.87 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.93 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.93 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.74 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.87 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.93 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.93 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.74 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.87 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.93 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.93 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.74 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.87 %
Streptomyces sp. CNH099	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNH099	0.93 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.93 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10022265	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3885	Open in IMG/M
3300001356\|JGI12269J14319_10228603	All Organisms → cellular organisms → Bacteria → Acidobacteria	708	Open in IMG/M
3300001593\|JGI12635J15846_10419897	Not Available	803	Open in IMG/M
3300004080\|Ga0062385_10241063	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300004091\|Ga0062387_100591775	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300004092\|Ga0062389_104587915	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300004635\|Ga0062388_100014852	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4316	Open in IMG/M
3300005177\|Ga0066690_10147559	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300005332\|Ga0066388_104694335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNH099	695	Open in IMG/M
3300005445\|Ga0070708_100405080	All Organisms → cellular organisms → Bacteria → Acidobacteria	1286	Open in IMG/M
3300005542\|Ga0070732_10618367	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300005542\|Ga0070732_10669331	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300005994\|Ga0066789_10230763	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300006059\|Ga0075017_100129240	All Organisms → cellular organisms → Bacteria → Acidobacteria	1783	Open in IMG/M
3300006102\|Ga0075015_100654240	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300006173\|Ga0070716_100036295	All Organisms → cellular organisms → Bacteria	2717	Open in IMG/M
3300006174\|Ga0075014_100016769	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2719	Open in IMG/M
3300006174\|Ga0075014_100103604	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300006174\|Ga0075014_100399340	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300006893\|Ga0073928_10514389	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300009089\|Ga0099828_10115667	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2338	Open in IMG/M
3300009522\|Ga0116218_1505219	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300009672\|Ga0116215_1002040	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12824	Open in IMG/M
3300010048\|Ga0126373_10782147	Not Available	1016	Open in IMG/M
3300010339\|Ga0074046_10527603	All Organisms → cellular organisms → Bacteria → Acidobacteria	703	Open in IMG/M
3300010343\|Ga0074044_10043803	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3097	Open in IMG/M
3300010379\|Ga0136449_100006910	All Organisms → cellular organisms → Bacteria	32648	Open in IMG/M
3300010398\|Ga0126383_10901761	All Organisms → cellular organisms → Bacteria → Acidobacteria	970	Open in IMG/M
3300010398\|Ga0126383_10938481	Not Available	952	Open in IMG/M
3300010880\|Ga0126350_11926109	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300012353\|Ga0137367_10792203	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300012925\|Ga0137419_10190592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1511	Open in IMG/M
3300012929\|Ga0137404_11469560	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300013297\|Ga0157378_13005856	Not Available	523	Open in IMG/M
3300014165\|Ga0181523_10411968	All Organisms → cellular organisms → Bacteria → Acidobacteria	752	Open in IMG/M
3300014168\|Ga0181534_10116036	All Organisms → cellular organisms → Bacteria → Acidobacteria	1350	Open in IMG/M
3300014169\|Ga0181531_10227672	All Organisms → cellular organisms → Bacteria → Acidobacteria	1135	Open in IMG/M
3300014498\|Ga0182019_10661925	All Organisms → cellular organisms → Bacteria → Acidobacteria	737	Open in IMG/M
3300014501\|Ga0182024_10275262	All Organisms → cellular organisms → Bacteria → Proteobacteria	2240	Open in IMG/M
3300014501\|Ga0182024_11010879	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	991	Open in IMG/M
3300016319\|Ga0182033_11716756	All Organisms → cellular organisms → Bacteria → Acidobacteria	569	Open in IMG/M
3300017823\|Ga0187818_10323690	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300017934\|Ga0187803_10425459	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300017943\|Ga0187819_10798016	Not Available	530	Open in IMG/M
3300017973\|Ga0187780_10217132	All Organisms → cellular organisms → Bacteria → Acidobacteria	1335	Open in IMG/M
3300017973\|Ga0187780_11247185	Not Available	545	Open in IMG/M
3300017975\|Ga0187782_10089236	All Organisms → cellular organisms → Bacteria → Acidobacteria	2262	Open in IMG/M
3300018034\|Ga0187863_10522651	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300018038\|Ga0187855_10012970	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	5563	Open in IMG/M
3300018042\|Ga0187871_10046560	All Organisms → cellular organisms → Bacteria → Acidobacteria	2631	Open in IMG/M
3300018044\|Ga0187890_10039759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2833	Open in IMG/M
3300018062\|Ga0187784_10193491	All Organisms → cellular organisms → Bacteria → Acidobacteria	1660	Open in IMG/M
3300018062\|Ga0187784_10688057	Not Available	819	Open in IMG/M
3300018085\|Ga0187772_10019478	All Organisms → cellular organisms → Bacteria → Acidobacteria	3873	Open in IMG/M
3300018085\|Ga0187772_10879987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300018086\|Ga0187769_10760234	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300018090\|Ga0187770_10676774	All Organisms → cellular organisms → Bacteria → Acidobacteria	823	Open in IMG/M
3300018090\|Ga0187770_11640226	Not Available	525	Open in IMG/M
3300020579\|Ga0210407_10490125	All Organisms → cellular organisms → Bacteria → Acidobacteria	961	Open in IMG/M
3300020580\|Ga0210403_10204247	Not Available	1622	Open in IMG/M
3300020580\|Ga0210403_10546175	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M
3300020580\|Ga0210403_11471217	Not Available	513	Open in IMG/M
3300020581\|Ga0210399_11613098	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300020582\|Ga0210395_10985886	Not Available	624	Open in IMG/M
3300021046\|Ga0215015_10426927	All Organisms → cellular organisms → Bacteria → Acidobacteria	1056	Open in IMG/M
3300021180\|Ga0210396_11526881	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300021405\|Ga0210387_10630936	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	951	Open in IMG/M
3300021406\|Ga0210386_10887541	All Organisms → cellular organisms → Bacteria → Acidobacteria	764	Open in IMG/M
3300021420\|Ga0210394_11687820	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300021433\|Ga0210391_10742183	Not Available	768	Open in IMG/M
3300021474\|Ga0210390_10013984	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6522	Open in IMG/M
3300021479\|Ga0210410_11807810	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300021861\|Ga0213853_11503412	All Organisms → cellular organisms → Bacteria → Acidobacteria	981	Open in IMG/M
3300023030\|Ga0224561_1001058	Not Available	2157	Open in IMG/M
3300024331\|Ga0247668_1123604	Not Available	525	Open in IMG/M
3300025906\|Ga0207699_10039760	All Organisms → cellular organisms → Bacteria	2705	Open in IMG/M
3300026294\|Ga0209839_10044517	Not Available	1628	Open in IMG/M
3300027064\|Ga0208724_1017462	Not Available	711	Open in IMG/M
3300027681\|Ga0208991_1031489	All Organisms → cellular organisms → Bacteria → Acidobacteria	1607	Open in IMG/M
3300027842\|Ga0209580_10289662	All Organisms → cellular organisms → Bacteria → Acidobacteria	815	Open in IMG/M
3300027867\|Ga0209167_10509689	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300027895\|Ga0209624_10003093	All Organisms → cellular organisms → Bacteria → Acidobacteria	11973	Open in IMG/M
3300027908\|Ga0209006_11043020	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300027911\|Ga0209698_11182002	Not Available	564	Open in IMG/M
3300028013\|Ga0265350_100185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1923	Open in IMG/M
3300028036\|Ga0265355_1006237	All Organisms → cellular organisms → Bacteria → Acidobacteria	930	Open in IMG/M
3300028798\|Ga0302222_10400673	Not Available	536	Open in IMG/M
3300028800\|Ga0265338_10178602	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1621	Open in IMG/M
3300028800\|Ga0265338_11129541	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300030494\|Ga0310037_10120616	All Organisms → cellular organisms → Bacteria → Acidobacteria	1206	Open in IMG/M
3300031010\|Ga0265771_1007978	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300031057\|Ga0170834_108316247	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300031231\|Ga0170824_103812745	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300031231\|Ga0170824_124025139	All Organisms → cellular organisms → Bacteria → Acidobacteria	1507	Open in IMG/M
3300031236\|Ga0302324_101248868	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300031823\|Ga0307478_10834962	Not Available	771	Open in IMG/M
3300032898\|Ga0335072_10044837	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6008	Open in IMG/M
3300032898\|Ga0335072_11512387	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300033547\|Ga0316212_1046401	Not Available	616	Open in IMG/M
3300033804\|Ga0314863_127555	Not Available	543	Open in IMG/M
3300033977\|Ga0314861_0291070	Not Available	739	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.33%
Host-Associated	Host-Associated	4.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.77%
Aquatic	Environmental → Aquatic	20.56%
Plants	Host-Associated → Plants	4.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.90%
Freshwater	Environmental → Aquatic → Freshwater	14.02%
Sediment	Environmental → Aquatic → Sediment	5.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.74%
Peat	Environmental → Terrestrial → Peat	1.87%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.93%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	22.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.08%
Loam	Environmental → Terrestrial → Soil → Loam	9.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.93%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.28%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.61%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.02%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	10.28%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.61%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.74%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.80%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.87%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.87%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.87%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.93%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027064	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF003 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028013	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE2	Environmental	Open in IMG/M
3300028036	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2	Host-Associated	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031010	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M
3300033804	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_20	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100222655	3300000567	Peatlands Soil	LPDAASNPVPSPKPRRWTILAAGFLLLALALVVIYTSRGAFFSPLALVVVAAIGLAALLLELRLRKDIGKPV
JGI12269J14319_102286032	3300001356	Peatlands Soil	MPDAASNQAPTPEPRRWTILAAGFLLLALALVVIYTSGSAFFSPLALVVVAAIGLAALLLQLRLRHDIGTPVRAPLWLNVLGLGFAVVALFADF
JGI12635J15846_104198971	3300001593	Forest Soil	LKSPLPALYNSPNGIPLPDAAPNPLPNAKSRRPAILGAGLLLLALALVVIYTGRGAFRSPIALVVVAAIGLAALLLQLRLRHDLTSVRRPLWLNALGVAC
Ga0062385_102410631	3300004080	Bog Forest Soil	LPDATSKPSPAPQPRRWTIFAAGFLLLALALVVIYTSRRAFASPLALVLVAAIGLAALLLQLRLRKDLT
Ga0062387_1005917751	3300004091	Bog Forest Soil	LPDATSNPLPDDAKPRRPAILAAGLLLLALALVVIYTGRGAFRSPLALVVGAAIGLAALLLQLRLRQDLPPSVRAPLWLNALGVISAIAAVVADVFRLSFTFLL
Ga0062389_1045879151	3300004092	Bog Forest Soil	LPDAASNPGPVPSSLPDPPGKPRRWSIVAAGLLLLALALVVIYTSRSAFYSPLALVVVAAIGIAALLLQLR
Ga0062388_1000148521	3300004635	Bog Forest Soil	LPDAAPTSPADSRPRRWSIFAAGFLLLALALVVIYTSRPAFSSPLALVVVAAIGLAALLLQLRLRKDLSVRAPLWLNL
Ga0066690_101475591	3300005177	Soil	VANALPVPASNPAPQPKPRRWSIIAAGFLLLALAFVVLYTSRTAFSSPLAMVVVGAIGLAALLLQIRLR
Ga0066388_1046943351	3300005332	Tropical Forest Soil	VPDPTSNPTAPPRPRGWALVAAGLLLLVLALVVIYTSRGAFFSPLALVVVAAIGLAALLLQLRLRKDVNSGIHPPLWVNVLGLIFALLAVWADFAHVKAS
Ga0070709_111061931	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPDTTSNQSPPTRPRDWSLVAAGLLLLVLALVVIYTNRSAFISPLALVVVASIGVAALLLQLRFRKDQDVDR
Ga0070708_1004050802	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LPNADSKPGLIAKPRRWTVFAAGLLLLALGLVVIYTSRGAFLSPLALVVVAAIGLAALLLQLRLRHNET
Ga0070732_106183671	3300005542	Surface Soil	VPDAPSNPTPQPRRRGWGIIAAGLLLLALAIVVLYTSRQAFHSPLAMVVVAAIGLAALLLQLRLRNS
Ga0070732_106693311	3300005542	Surface Soil	LYNFEGQAFLPEDASNPVPGTNPRRWTIFPAALLLVALALVVIYTSRSAFLSPLALVVVAAIGLAALLLQLRLRRNLATPVRAPVWLNVLGVVSAVVAVFADVLRLSTAWL
Ga0066789_102307631	3300005994	Soil	LPDAPSNPAPPPKSRRWSIVAAGFLLLALALVVIYTSRSAFSSPLALVVVAAIGLAALLLQLRLRKDTSAEVHAPLWLNVLGLIFA
Ga0075017_1001292402	3300006059	Watersheds	LPDATSNSAPAPKPRRSTIFAAGFLLLALALVVIYTSRSAFLSPLALVVVAAIGLAALLLQLRLRKDIGVPVRAPVG
Ga0075015_1006542401	3300006102	Watersheds	LPDAASNSAPAPKPRRSTILAAGFLLLALALVVIYTSRSAFLSPLALVVVAAIGLAALLLQLRLRKDIGAP
Ga0070716_1000362951	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPNATSNQSPAPKPRGWSLVAAGFLLLALALVVIYTSRSAFLSPLALVVVASIGLAALLLQL
Ga0075014_1000167691	3300006174	Watersheds	LPDATSNSAPAPKPRRSTIFAAGFLLLALALVVIYTSRSAFLSPLALVVVAAIGLAALLLQLRLRKDIGVPVRAPVGLNVLGLIFAVAAIFAD
Ga0075014_1001036042	3300006174	Watersheds	LPDVPSNPAPPSQSRRWTIVAAGLLLLALALVVIYTSRAAFSSPLALVVVAAIGLAALLLQLRLRKDAPAGVHAPLWLNVLGLIFAVTAVIADVFHFTANI
Ga0075014_1003993402	3300006174	Watersheds	LSQDDPNPAPQPKPRGWSIIAAGFLLIALTLVVMYTSRAAFSSPLALVVVAAIGLAALLLQLRLRKDLSGRIQAPLSLNVLG
Ga0073928_105143891	3300006893	Iron-Sulfur Acid Spring	LPDAASNPVPAPKPRRWSIVAAGLLLAALALVVIYTSRSAFFSPLALVVVAAIGLAALLLQLRLRRDRDKDLNTSVRAPLWLNVL
Ga0099828_101156671	3300009089	Vadose Zone Soil	LPNADSKPGLIAKPRRWTVFAAGLLLLALGLVVIYTSRGAFLSPLALVVVAAIGLAALLLQLRLRHNETARVH
Ga0116218_15052191	3300009522	Peatlands Soil	LPDAASNPAPAPQPQPERKSRRWTIVAAGLLLLALALVVIYTSRAAFSSPLALVVVAGIGLAALLLQLRLRQDLSAQVRNDVRAP
Ga0116215_10020401	3300009672	Peatlands Soil	LERKSLPDADSNPAPAPRPRRWTIVAAGLLLFALALVVIYTSRRAFISPLALVVVAAIGLAALLLQLRLRKDISVPVRAPVLLNGLGLALALAAVLADMFHI
Ga0126373_107821471	3300010048	Tropical Forest Soil	LPDTDPNQTSSPKPRRWTIVAAGFLLLELALVVIYTGRGAFLSPLALVVVAAIGLAALLLQLWLHKGLADQIRAPLWLNVLG
Ga0074046_105276031	3300010339	Bog Forest Soil	VPDAVPNSAPAPKPRRRTILAAGFLLLALALVVIYTSRTAFFSPLALVVVAAIGLAALLLELRLRRDLGTPVRAPLWLNVVG
Ga0074044_100438031	3300010343	Bog Forest Soil	LPDTASNPVPAPQPDLPGKPRRWSIIAAGLLLLALALVVIYTSRAAFFSPLALVVVAAIGLAALLLELRFRKDVSPRVRAPLWLNVLGLVFAIGAVFDFHFGADLKLVAA
Ga0136449_10000691027	3300010379	Peatlands Soil	LPDAASNPAPAPRPRGWTIVAAGFLLLALALVVIYTSNAAFFRPLALVVVAAIGLAALLLKLRLRHDIGATVRAPLWLNVLGLVFALAAVFADVVHLNASR
Ga0126383_109017611	3300010398	Tropical Forest Soil	LADTAPNQTPPLKPRRWTILAAGLLLLGLALVVLYTTRGAFLSPLALVVVAAIGLAALLLQLQLRKDLSGQIHAPLWL
Ga0126383_109384811	3300010398	Tropical Forest Soil	LPDTAPNQTSPPKPRRWTIVAAGLLLLALALVVIYTSRGAFLSPLAMVVVAAIGLAALLLQLRLHKDLTDRIHAPLWLNVLGLVFA
Ga0126350_119261091	3300010880	Boreal Forest Soil	LPDAASNPAAAPKPRRWSIVAAGLLLGALALVVIYTSRSAFFSPLALVVVAAIGLAALLLQLRLSRDKERDLSTSVRAPLWLNVL
Ga0137367_107922031	3300012353	Vadose Zone Soil	LPDSASNPRPAPKRRWDIIAAGLLLLALAGVVIYTSHAAFSSPLALVVVAAIGIVAMMLQLRLGSAGTQVRAPLAINVLGLMFAVAAVLADIAHF
Ga0137419_101905923	3300012925	Vadose Zone Soil	MDGNLLPEAASNSNSTLKSRRLAIVSAGLLLLALAMVVIYTNRSAFLSPLALVVVAAIGLAALLL
Ga0137404_114695602	3300012929	Vadose Zone Soil	VSDATSNPDPPANPRRGTILAAGLLLLALALVVIYTSRNAFFSPLAIVIVAAIGLAALLLQPRLRRDLNKKAASP
Ga0157378_130058562	3300013297	Miscanthus Rhizosphere	MPNATSNQSPAPKPRGWSLVAAGFLLLALALVVIYTSRSAFLSPLALVVVASIGLAALLLQLRMRKDVDGRIHAPIWLNVLGL
Ga0181523_104119682	3300014165	Bog	VQNLLADASPNSPPPKPRRWTIVAAGFLLLALALVVIYTSRAAFFSPLALVVIAAIGLAALILQLRLRQGASGSVRTPLWLNALGLIFALAAVFFHLS
Ga0181534_101160361	3300014168	Bog	LPGSSSNPHSPPRLEPDPPGKPRRWSILAAGLLLLALALVVIYTSRSAFSSPLALVVVATIGLAALLLQLRLRSKNKDQSATQVHAPL
Ga0181531_102276721	3300014169	Bog	LPDAAANPPPEPESQSRRWTVVAAGLLLLALALVVIYTSRAAFYSPLALVVVAAIGLAALLLQLRLRNDPDALAGTQVRAPLWLNVLGIIFA
Ga0182019_106619251	3300014498	Fen	LPASESNPSPDPKPHGSSIIAAGLLLLALALVVLYTNRPAFSSPLAMVVVAAIGLAALLFQLRLRKD
Ga0182024_102752621	3300014501	Permafrost	LPDDASNSPSAPKPRRWSIVAAGLLLIALALVVIYTSRSAFLSPLALVVVAAIGLAALLLELRLRKDL
Ga0182024_110108793	3300014501	Permafrost	LPDAASNSPSAPKPRRWSILAAGLLLIALALVVIYTSRSAFLSPLALVVVAAIGLAALLLELRLRKDL
Ga0182033_117167561	3300016319	Soil	VPEPTSNPAPLPKPRGWALVAAGFLLLALSLVVIYTRRGAFLSPLALVVVAAIGLAALLFQLRLRKDMDTTVHP
Ga0187818_103236901	3300017823	Freshwater Sediment	VPCITWDDSLPGADSNPASQRKARGWSLVAAGLLLLALALVVVYTGHAAFSSPLAIVVLAAIGLAALLLQLRLRKDLSTPVRAPFWLNVAGLGFALAAVF
Ga0187803_104254592	3300017934	Freshwater Sediment	VTEPAANPAPPPKPRGWGLVAAGFLLLALALVVLYTGRGAFLSPLALVVVAAIGLAALLLQLRLRRDSDKSIHAPLWL
Ga0187819_107980161	3300017943	Freshwater Sediment	LPDAASNPVPAPKPRRRTILAAGFLLLALALVVIYTSPSAFFSPLALVVVAAIGLAALLLELRLRKDIGKPVHAPLWLNVA
Ga0187780_102171321	3300017973	Tropical Peatland	LPDAPSNPPATPKPRGWGLVAAGLLLLALSLVVIYTSRRAFFSPLALVVVAAIGLAALLLQLRLRRDLHTAVRAPLWLNVLGLLFAIGAVFADM
Ga0187780_112471852	3300017973	Tropical Peatland	LPDAASNPAPAPKPRRWTIVAAGFLLLALALVVIYTSRSAFFSPLALVVVAAIVLAALLLQIRLRRDIGVPVRAPLWL
Ga0187782_100892361	3300017975	Tropical Peatland	LSEITPNPTPQPKSRTWGVISAGLLLLALAMVVLYTSRPAFSSPLALVVVAAIGLAALLLQLRLRKDAQTPVRAPLWLNVLGLVLAVVSIFADV
Ga0187863_105226511	3300018034	Peatland	LPGSSSNPHSPPRLEPDPPGKPRRWSILAAGLLLLALALVVIYTSRSAFSSPLALVVVATIGLAALLLQLRLRSKNKDQSATQVHAPLWLNVLGL
Ga0187855_100129706	3300018038	Peatland	LPDASSNPVPAQPEPDLPGKPRRWSIIAAGLLLLALALVVIYTSRAAFFSPLALVVVSAIGLAALLLELRFRKDVSPRVRAPLW
Ga0187871_100465604	3300018042	Peatland	VSNISPNPGPESPPRRSTILAAGLLLLALALVVIYTSRGAFQSPLALVVVAAIGLAALLLQQRLRPDLAASVRVPVWLNGVGVGL
Ga0187890_100397591	3300018044	Peatland	VPDAASNPLPNAKSRRPAILAAGLLLLALALVVIYTGRGAFRSPIALVVVAAIGLAALLLQLRLRQDLPASVRAPLWLNALGVISAIVAVVADVFRLNFA
Ga0187784_101934912	3300018062	Tropical Peatland	VPESASNSPPVPKPRRWTIIAAGFLLLALALVVIYTSRKAFLSPLALVVVAAIGLAALLLEIRLRQDIGVPVRAPLWL
Ga0187784_106880572	3300018062	Tropical Peatland	LPEAAPNPTPAPKARRWTIVAAGFLLLALALVVVYTSRNALLSPLAVVVVAAIGLAALLLELRLRKYIATPVRAPLW
Ga0187772_100194781	3300018085	Tropical Peatland	VPDTASNPLPGPRPRRRTILAAGFLLLALALVVMYTSRNAFLSPLALVVVAAIGLAALLLEIRLRRDIGVP
Ga0187772_108799872	3300018085	Tropical Peatland	LPDAASNPVPASKPRRWTILAAGFLLLALALVVIYTSPSAFLSPLALMVVAAIGLAALLLELRLRKDIGTPVHAPLWLNVAGLVL
Ga0187769_107602341	3300018086	Tropical Peatland	VPESPSNPASPPKPRRWTVIAAGFLLLALALVVIYTSRKAFLSPLALVVVAAIGLAALLLEIRLRQDIGVPVRAPLWLNITGLIFAVAAVFADALRLNA
Ga0187769_112002862	3300018086	Tropical Peatland	LNSHLKTSRSALYNLGRKSLPDASSNPAPARQPRRWTIFAAGFLLLALALVVIYTSRSAFLSPMALVVVAAIGLAALLLC
Ga0187770_106767741	3300018090	Tropical Peatland	LPDAGSNPAVVPKPRRWTILAAGFLLLALSLVVIYTSRSALLSPLALVVVAAIGLAALLLEIRLRRD
Ga0187770_116402261	3300018090	Tropical Peatland	VPDIASNPAPAPKPRRWTILAAGFLLLALALVVIYTSRSAFFSPLAMIVVAAIGLAALLLELRLRRDIGVSVHAPVGLNVLGLICAF
Ga0210407_104901251	3300020579	Soil	LPDAASNPAPAPQPQPERKSRRWTIVAAGLLLLALALVVIYTSRAAFSSPLALVVVAAIGLAALLLQLRLRKDVSTQVGNE
Ga0210403_102042472	3300020580	Soil	LPDPASNPAGAPKSLRLRIVAAGLLLLALGVVVIYTSRPAFFSPLAIVVVAAIGLAALLLQLRLRRDLNAPVH
Ga0210403_105461752	3300020580	Soil	LPDATSKPSSAPTPQSRRWTIFAAGLLLLALALIVLYTSSRAFYSPLALVVVAAIGLAALLLQLRLRKDLGTPVRAPLWLNVLGVVFAFGAVMA
Ga0210403_114712171	3300020580	Soil	LKSPRSALYNLERNSLPDAASNPVPAQPEPDLSAKPRRWSIVAAGLLLLALALVVIYTSRAAFFSPLALVVVAAIGLAALLLELRFRKDVSPRVRAPLWLNVLGLVFALGA
Ga0210399_116130981	3300020581	Soil	LPDATSKPSPKPQPRRWSIFAAGLLLLALALVVIYTSGRAFSSPLALVVVAAIGLAALLLQLRLRKDLSTPVRAPLWLNVLG
Ga0210395_109858861	3300020582	Soil	LPDAASNPEPDDKPRRSTILAAGLLLLALALVVIYTGRGAFRSPIALVVVAAIGLAALLLQLRLRQDLPASVRAPLWLNALGVISAIVAVVADVFRLNF
Ga0215015_104269271	3300021046	Soil	LPNADSKPGLVAKPRRWTVFAAGLLLLALGLVVIYTSRGAFLSPLALVVVAAIGLAALLLQLRLRHNGTARLHSPLWLNVLG
Ga0210396_115268811	3300021180	Soil	LPDATSKPSPKPQPRRWSIFAAGLLLLALALVVIYTSGRAFSSPLALVVVAAIGLAALLLQLRLRKDLSTPVRAPLWLNVLGLVFAIGAVCA
Ga0210387_106309361	3300021405	Soil	LPDPASNPAAAPKSLRLRIVAAGLLLLALGVVVIYTSRPAFFSPLAIVVVAAIGLAALLLQLRLRRDLNAPVHAPLWL
Ga0210386_108875411	3300021406	Soil	LPDAASNPAPAPQPQPERKSRRWTIVAAGLLLLALALVVIYTSRAAFSSPLALVVVAAIGLAALLLQLRLRKDVST
Ga0210394_116878202	3300021420	Soil	VPDESPNPAPDPRSRRPTIMAAGLLLLALALVVIYTSRGAFLSPLALVVVAAIGLAALLLQLRLRTDLHPSIRGPLWLN
Ga0210391_107421832	3300021433	Soil	LPDAASNPEPDDKPRRSTILAAGLLLLALALVVIYTGRGAFRSPIALVVVAAIGLAALLLQLRLRQDLPASVRAPLWLNALGVI
Ga0210390_100139847	3300021474	Soil	LKSPRSALYNLERNSLPDAASNPVPAQPEPDLPGKPRRWSIVAAGLLLLALALVVIYTSRAAFFSPLALVVVAAIGLAALLLELRFRKDVSPRVRAPLWLNVLGLVFALGAV
Ga0210402_102310722	3300021478	Soil	LPDADSNPASASKPRRWTIVAAGLLLFALALVVIYTSRTAFFSPLAMVVVAAIGLAALLLQLR
Ga0210410_118078101	3300021479	Soil	VPDESPNPAPDPRSRRPTIMAAGLLLLALALVVIYTSRGAFLSPLALVVVAAIGLAALLLQLRLRTDLHPSIRGP
Ga0213853_115034121	3300021861	Watersheds	LPDAAPNPAPTPKPRRWTILAAGFLLLALSLVVTFTSGSAFLSPLALVVVAAIGLAALLLQLRLRHDIGTPVHAPLWLNVVGLVFAVVALFAD
Ga0224561_10010583	3300023030	Soil	LPDAASNPEPDDKPRRSTILAAGLLLLALALVVIYTGRGAFRSPIALVVVAAIGLAALLLQLRLRQDLPASVRAPLW
Ga0247668_11236041	3300024331	Soil	MPNATSNQSPAPKPRGWSLVAAGFLLLALALVVIYTSRSAFLSPLALVVVASIGLAALLLQLRMRKDVDGRIHAPIWLNVLGLIFAIG
Ga0207699_100397601	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LPDAASNPSPGPKSRRWTIVAAGLLLLALALVVIYTSRSAFSSPLALVVVAAIGLAALLLQLRLRKDLTTQVRAP
Ga0209839_100445172	3300026294	Soil	LPDPASNPAAAPKSLRLRIVAAGLLLLALGVVVIYTSRPAFFSPLAIVVVAAIGLAALLLQLRL
Ga0208724_10174622	3300027064	Forest Soil	LPDAASNPEPDDKPRRSTILAAGLLLLALALVVIYTGRGAFRSPIALVVVAAIGLAALLLQLRLRQDLPASVRAPLWLNALGVISAIVAVVADVFR
Ga0208991_10314892	3300027681	Forest Soil	LPNADSNPGLIDKPRRWTIFAAGLLLLALALIVIYTSRGAFLSPLALVVVAAIGLAALLLQLRLRHNGTARVRSPLWLNVLGIVLA
Ga0209580_102896622	3300027842	Surface Soil	LPDAAPNQTSSKPRRWTIVAAGLLLLALALVVIYTSRGAFLSPLAMVVVAAIGLAALLLQLRLHKDLTDQIRAPLWLNVL
Ga0209167_105096891	3300027867	Surface Soil	LPDATSNPAPTPKPRRWTIFAAGLLILALAVVVLYTSSRAFSSPLAIVVVAAIGLAALLLQLRFRRDIGTPVRAPVWLNVLGLACALGAV
Ga0209624_1000309311	3300027895	Forest Soil	LPDAAPNPRSAPQPRRWSIVAAGLLLLALALVVIYTSRSAFFSPLALVVVAAIGLAALLLQSRLRKGLPNPVRAPLWLNVLGVVFAVAAVAADLL
Ga0209006_110430202	3300027908	Forest Soil	LPDAASNPVPAPKPRRWSIVAAGLLLLALALVVIYTSRSAFSSPLALVVVAAIGLAALLLQLRFRTQGSGRVRAPLWLNVLGLIF
Ga0209698_111820021	3300027911	Watersheds	LPDVTSNPQPKPRRWTIFAAGLLLLALGVVVLYTNNRAFSSPLAIVVVAAIGLAALLMQLRLRKDIGTPVHSPLWLNVLG
Ga0265350_1001851	3300028013	Soil	LPDAASKPLPNAKSRRPAILGAGLLLLALALVVIYTGRGAFRSPIALVVVAAIGLAALLLQLRLRHDLPSMRSPLWLNAVGVVSATVA
Ga0265355_10062371	3300028036	Rhizosphere	VSDITPNPGPETPPRRPTILAAGLLLLALALVVIYTSRSAFQSPLALVVVAAIGLAALLLQQRLRPDLAASVRVPVWLNGVGV
Ga0302222_104006731	3300028798	Palsa	MPAPKPRGWGLVAAGFLLLALALVVLYTSRPAFSSPLAIVVVAAIGLAALLLQLRLRKDIGTAIRSPLWL
Ga0265338_101786023	3300028800	Rhizosphere	MPDATSKQTPSPKPRGWSLVAAGLLLLALALVVIYTGRGAFLSPLALVVVAAIGLAALLLQTRLRKDIDRRV
Ga0265338_111295412	3300028800	Rhizosphere	MSRSALYNLGRNSLPDAPSNPAPAPRSRRWSVVAAGLLLLALALVVIYTSRSAFSSPLALVVVAAIGLAALLLQLR
Ga0310037_101206162	3300030494	Peatlands Soil	LPDAASNPAPAPQPQPERKSRRWTIVAAGLLLLALALVVIYTSRAAFSSPLALVVVAAIGLAALLLQLRLRQDLSAQVKHDVRAPLWLN
Ga0265771_10079782	3300031010	Soil	VSDITPNPGPETPPRRPTILAAGLLLLALALVVIYTSRGAFQSPLALVVVAAIGLAALLLQQRLRPDLAASVRVPVWLNGIGVGL
Ga0170834_1083162471	3300031057	Forest Soil	LSRAPSNPAPDSQSQPKPRRWSIIGAGLLLVALALVVLYTTRSAFTSPLALVVVATIGIAALLLQLL
Ga0170824_1038127451	3300031231	Forest Soil	LSRAPSNPAPDSQSQPKPRRWSIIGAGLLLVALALVVLYTTRSAFTSPLALVVVATIGIAALL
Ga0170824_1240251391	3300031231	Forest Soil	LPDATSKPSPTPPPRRWTVFAAGLLLFALALVVIYTSHRAFSSPLALVVVAAIGMAALLLHLRLRKNADIGKDKEASTPVRAPLWLNVLGVAFAIAAVAADIL
Ga0302324_1012488681	3300031236	Palsa	VPEDPPTSDASPRKRGSTIFAAGLLLVALALVVLYTSRRAFMSPVALVVVAAIGLAALLLQLRMRQGVVPGVRAPFWLNLLGVVLAAIAVFADVFRFSA
Ga0310686_1037677111	3300031708	Soil	LICYDRATDLKTPRSALYNLERNPLPDATSNPVPAQPEPDLPGKPRRWSIIAAGLLLLALALVVIYTSRAAFFSPLALVVVAAIGLAALLLELRLRKDVSPRVRAPLWLNVLGLAFALGAVFADLFHV
Ga0307478_108349621	3300031823	Hardwood Forest Soil	LPDGASNPVPAQPGPDLPGKPRRWSIIAAGLLLLALALVVIYTSRAAFFSPLALVVVAAIGLAALLLELRFRKDVSPRVRAPLWLNV
Ga0335080_117491512	3300032828	Soil	LSDDPSNAPGVKPRRWTIFAAGLLLLALALVVIYTSRRAFQSPLALVVVAAIGMAALL
Ga0335072_100448376	3300032898	Soil	LPDAASNPATAPKPRRWTVFAAAFLLLALALVVIYTSRRAFMSPLALVVVAAIGLAALLLQLRLRGDSGKPGPVRLLLNGLGILFAVAAVFGDRL
Ga0335072_115123872	3300032898	Soil	VPDADSNPGLTAKPHRWTIIAAGLLLLALALVVIYTSTGAFRSPVALVVVAAIGFAALLLQLRFRQDPIKPIRAPLWLNILGIIFSVATVL
Ga0335076_101178101	3300032955	Soil	LPDSPANPAKPRRWTIFASALLLLALSLVVIYTTRAAFFSPLALVVVAAIGLAALLLQLRMRSDMEKPARA
Ga0316212_10464011	3300033547	Roots	LPDAASKPLPNAKSRRPAILGAGLLLLALALVVIYTGRGAFRSPIALVVVAAIGLAALLLQLRLRHDLPSMRSPLWLNAVGVVSATVAVV
Ga0314863_127555_3_278	3300033804	Peatland	MPDAAANPVPAPKPRRWTILAAGFLLLALALVVIYTSRNAFFSPLALMVVAAIGLAALLLELRLRRDIGVSVHAPLWLNVLGLVCAFGALLA
Ga0314861_0291070_2_265	3300033977	Peatland	LPEAASNPTSASKPRRWTIVAAGFLLLALALVVIYTSRNAFLSPLALVVVAAIGLAALLLELRLRKDIGRPVHAPLWLNVVGLVFAVC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092635

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences