NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F092649

Metagenome / Metatranscriptome Family F092649

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092649
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 62 residues
Representative Sequence RMGSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSGSGRT
Number of Associated Samples 97
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 41.12 %
% of genes near scaffold ends (potentially truncated) 58.88 %
% of genes from short scaffolds (< 2000 bps) 98.13 %
Associated GOLD sequencing projects 94
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (93.458 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil
(15.888 % of family members)
Environment Ontology (ENVO) Unclassified
(28.972 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.467 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 11.11%    β-sheet: 0.00%    Coil/Unstructured: 88.89%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF07369DUF1488 3.74
PF06233Usg 0.93
PF10276zf-CHCC 0.93
PF03070TENA_THI-4 0.93
PF13763DUF4167 0.93
PF03466LysR_substrate 0.93
PF13358DDE_3 0.93
PF13683rve_3 0.93
PF09361Phasin_2 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.46 %
UnclassifiedrootN/A6.54 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918007|ConsensusfromContig131684All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium702Open in IMG/M
3300001545|JGI12630J15595_10039183All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium962Open in IMG/M
3300001661|JGI12053J15887_10641487All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium505Open in IMG/M
3300002245|JGIcombinedJ26739_100392911All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1266Open in IMG/M
3300002245|JGIcombinedJ26739_101098272All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium682Open in IMG/M
3300002245|JGIcombinedJ26739_101191337All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium651Open in IMG/M
3300002917|JGI25616J43925_10074642All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1428Open in IMG/M
3300005165|Ga0066869_10013993All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1136Open in IMG/M
3300005171|Ga0066677_10803824All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium520Open in IMG/M
3300005172|Ga0066683_10630151All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium646Open in IMG/M
3300005181|Ga0066678_10905740All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 170577Open in IMG/M
3300005435|Ga0070714_101790995All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium599Open in IMG/M
3300005439|Ga0070711_100405565All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1107Open in IMG/M
3300005439|Ga0070711_100669568All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei871Open in IMG/M
3300005439|Ga0070711_100762306All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae818Open in IMG/M
3300005439|Ga0070711_102016633All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium508Open in IMG/M
3300005444|Ga0070694_101704183Not Available536Open in IMG/M
3300005447|Ga0066689_10297153All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1001Open in IMG/M
3300005455|Ga0070663_101755762All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium555Open in IMG/M
3300005457|Ga0070662_100519439All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei995Open in IMG/M
3300005467|Ga0070706_101270294All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium676Open in IMG/M
3300005468|Ga0070707_101789342All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 170582Open in IMG/M
3300005518|Ga0070699_101617146All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 170594Open in IMG/M
3300005568|Ga0066703_10714836All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 170576Open in IMG/M
3300005712|Ga0070764_10612516All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 170665Open in IMG/M
3300006047|Ga0075024_100290112All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium799Open in IMG/M
3300006057|Ga0075026_100851996All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium556Open in IMG/M
3300006172|Ga0075018_10526385All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 170619Open in IMG/M
3300006795|Ga0075520_1346276All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium606Open in IMG/M
3300006854|Ga0075425_102147561All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium623Open in IMG/M
3300006871|Ga0075434_101988895All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 170587Open in IMG/M
3300009038|Ga0099829_11217005All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium623Open in IMG/M
3300009088|Ga0099830_11414695All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium579Open in IMG/M
3300009092|Ga0105250_10283118All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium714Open in IMG/M
3300009148|Ga0105243_10571318All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1084Open in IMG/M
3300010373|Ga0134128_10399650All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1534Open in IMG/M
3300010401|Ga0134121_11362938All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium718Open in IMG/M
3300010860|Ga0126351_1036897All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium578Open in IMG/M
3300010880|Ga0126350_10658863All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1022Open in IMG/M
3300011120|Ga0150983_14750518Not Available957Open in IMG/M
3300011120|Ga0150983_14754367Not Available1107Open in IMG/M
3300011269|Ga0137392_10451933All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1067Open in IMG/M
3300012205|Ga0137362_11689593All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium520Open in IMG/M
3300012358|Ga0137368_10525105All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium760Open in IMG/M
3300012359|Ga0137385_10960166Not Available706Open in IMG/M
3300012917|Ga0137395_10572364All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 170815Open in IMG/M
3300012927|Ga0137416_10668832All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium910Open in IMG/M
3300014969|Ga0157376_11922374All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 170629Open in IMG/M
3300018051|Ga0184620_10323848All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 170521Open in IMG/M
3300018466|Ga0190268_10331394All Organisms → cellular organisms → Bacteria935Open in IMG/M
3300019872|Ga0193754_1038720All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 170501Open in IMG/M
3300019882|Ga0193713_1016277All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2221Open in IMG/M
3300019886|Ga0193727_1071175All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1073Open in IMG/M
3300019889|Ga0193743_1209477All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium610Open in IMG/M
3300020002|Ga0193730_1052186All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1179Open in IMG/M
3300020018|Ga0193721_1109890All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium701Open in IMG/M
3300020021|Ga0193726_1094490All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1361Open in IMG/M
3300020199|Ga0179592_10149851All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1067Open in IMG/M
3300020199|Ga0179592_10151183All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1062Open in IMG/M
3300020581|Ga0210399_11027153All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium663Open in IMG/M
3300020581|Ga0210399_11205647All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei601Open in IMG/M
3300021168|Ga0210406_10537762All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium920Open in IMG/M
3300021171|Ga0210405_11131951All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 170583Open in IMG/M
3300021180|Ga0210396_11460419All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium563Open in IMG/M
3300021403|Ga0210397_11298216All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 170565Open in IMG/M
3300021411|Ga0193709_1096965All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria638Open in IMG/M
3300021418|Ga0193695_1019879All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1406Open in IMG/M
3300021420|Ga0210394_11748253All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei520Open in IMG/M
3300021475|Ga0210392_10633078Not Available794Open in IMG/M
3300021478|Ga0210402_10427403All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1230Open in IMG/M
3300022467|Ga0224712_10644045All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 170519Open in IMG/M
3300025457|Ga0208850_1020941All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1165Open in IMG/M
3300025544|Ga0208078_1093845All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium611Open in IMG/M
3300025898|Ga0207692_10893847Not Available584Open in IMG/M
3300025916|Ga0207663_10632494All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei843Open in IMG/M
3300026355|Ga0257149_1046297All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium626Open in IMG/M
3300026377|Ga0257171_1060040All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium662Open in IMG/M
3300026469|Ga0257169_1045039All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium686Open in IMG/M
3300026507|Ga0257165_1060367All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium687Open in IMG/M
3300026508|Ga0257161_1082495All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium664Open in IMG/M
3300026515|Ga0257158_1079344All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium633Open in IMG/M
3300026538|Ga0209056_10239615All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1296Open in IMG/M
3300026551|Ga0209648_10344816All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1029Open in IMG/M
3300026721|Ga0208841_104898All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae517Open in IMG/M
3300026880|Ga0209623_1011393All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium593Open in IMG/M
3300026999|Ga0207949_1019818All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 170615Open in IMG/M
3300027174|Ga0207948_1034356All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium608Open in IMG/M
3300027297|Ga0208241_1054490All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium636Open in IMG/M
3300027388|Ga0208995_1014402All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 1701353Open in IMG/M
3300027616|Ga0209106_1060006All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 170851Open in IMG/M
3300027671|Ga0209588_1190633All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium641Open in IMG/M
3300027727|Ga0209328_10096351All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium904Open in IMG/M
3300027862|Ga0209701_10742309All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium501Open in IMG/M
3300027875|Ga0209283_10300319All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1060Open in IMG/M
3300027875|Ga0209283_10451289All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei833Open in IMG/M
3300027895|Ga0209624_10862429Not Available592Open in IMG/M
3300027903|Ga0209488_11019860All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 170571Open in IMG/M
3300028047|Ga0209526_10114019All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 1701900Open in IMG/M
3300028047|Ga0209526_10650606All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium669Open in IMG/M
3300028807|Ga0307305_10164133All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1025Open in IMG/M
3300030988|Ga0308183_1078375All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 170717Open in IMG/M
3300031090|Ga0265760_10270437All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium594Open in IMG/M
3300031677|Ga0307480_1007800All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium705Open in IMG/M
3300031868|Ga0316038_107715All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium683Open in IMG/M
3300031962|Ga0307479_10117661All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2590Open in IMG/M
3300032075|Ga0310890_11294862All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium596Open in IMG/M
3300032119|Ga0316051_1012809All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium711Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil15.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil14.02%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil14.02%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil14.02%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere9.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.67%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.80%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil2.80%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.87%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.87%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.87%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.87%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.87%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.87%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.87%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.93%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.93%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918007Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_allEnvironmentalOpen in IMG/M
3300001545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300005165Soil and rhizosphere microbial communities from Laval, Canada - mgHMCEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006795Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-BEnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010860Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300019872Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a1EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300019889Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021411Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2EnvironmentalOpen in IMG/M
3300021418Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2EnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300022467Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025457Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025544Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026355Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-AEnvironmentalOpen in IMG/M
3300026377Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-BEnvironmentalOpen in IMG/M
3300026469Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-BEnvironmentalOpen in IMG/M
3300026507Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-BEnvironmentalOpen in IMG/M
3300026508Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-AEnvironmentalOpen in IMG/M
3300026515Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-AEnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026721Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN395 (SPAdes)EnvironmentalOpen in IMG/M
3300026880Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300026999Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)EnvironmentalOpen in IMG/M
3300027174Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)EnvironmentalOpen in IMG/M
3300027297Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)EnvironmentalOpen in IMG/M
3300027388Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300030988Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031677Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031868Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLA1 metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032119Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A_all_C_023015202140918007SoilMGSVEEGGLGAGRTLLNKTAPRGEQFVSISVADLFVGRRSAGRPGLDFASVRQAPDSGSGRT
JGI12630J15595_1003918323300001545Forest SoilMGSVEEGGLGAGRTLLNKTGRRSEQFVSIGVAALFVGRRSAGRPGLDFASVGQASDSGSRRT*
JGI12053J15887_1064148723300001661Forest SoilVRLRMGSVEEGGLGAGITLLSKTARRSEQFVSISVADLFVGRHSAGRPGLDFASIGQASDSVSGRT*
JGIcombinedJ26739_10039291133300002245Forest SoilMGSVEEGGLGAGGTLLNKTTCRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSGSGRT*
JGIcombinedJ26739_10109827223300002245Forest SoilVRLRMGSVEEGGLGAGRTLLNXTARRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSGSGRT*
JGIcombinedJ26739_10119133713300002245Forest SoilGPKGIVCLRMGVCLRMGSVEEGGLGAGRTLLNKTVRRGEQLVSVSNLFVGRRPAGRPGLDFAFVGEASDSGSSRT*
JGI25616J43925_1007464233300002917Grasslands SoilMGSVEEGGLGAGRTLLSKTARRSEQFVSISVADLFVGRRPGLDFAFVGQASDSGSGRT*
Ga0066869_1001399323300005165SoilMGSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFASVGQAYDSGSGRT*
Ga0066677_1080382413300005171SoilPKGIVRSRIESVEEGGLGAGRTLLTACRSEQLVSISAADLFVDRRSAGRPGLDFASVGQAYDSGSGRT*
Ga0066683_1063015123300005172SoilMGSVEEGGLGAGRTLLNKTAHRSEQFVSISVADLFVGRHSAGRPGLDFAPVGQASDSDSGRT*
Ga0066678_1090574023300005181SoilMGSVEEGGLGAGRTLLNKTARRSEQFVSISVAALFVGRRSAGRPGLDFASV
Ga0070714_10179099513300005435Agricultural SoilMGSVEEGGLGAGRTLLGKTARRSEQFVSIGVADLFVGRRSAGRPGLDFTPVGQASDSGSGRI*
Ga0070711_10040556543300005439Corn, Switchgrass And Miscanthus RhizosphereVRLRMGNVEEGGLGAGRTLLNKTARRSEKFVSTSVADLFVGRHSAGRPGLDFASVGQASASVSGRT*
Ga0070711_10066956813300005439Corn, Switchgrass And Miscanthus RhizosphereTLLTARRSEQFVSISASDLFVDRRSAGRPGLDFASVGQANDSGSGRT*
Ga0070711_10076230623300005439Corn, Switchgrass And Miscanthus RhizosphereMGSVEEGGLGAGRTLVNKTARRREKFASISVAALFVGRRSAGRPGLDFASVGQASDSGS
Ga0070711_10201663313300005439Corn, Switchgrass And Miscanthus RhizosphereMGSVEEGGLGAGGTLLNKTARRSDQFVSTSVADLFVGRRSAGRPGLDFASVGQASDSGSRRT*
Ga0070694_10170418323300005444Corn, Switchgrass And Miscanthus RhizosphereMTQAVAIRCFACEEGGLGTGSALLNITARQSEQFVAISVADLFVGRRSAGRPGLDFASVGQASDSDSGRT
Ga0066689_1029715343300005447SoilMGSVEEGGLGAGRTLLNKTAHRSEQFVSISVAALFVDRRSAGRPGLNFASVGQASDSGFGRTWRTNRPVDSADH
Ga0070663_10175576223300005455Corn RhizosphereMGSVEEGGLGTGRTLLNKTARRSEQFVSISVAALFVGRRSAGRPGLDFASVGQAYNSGSGRT*
Ga0070662_10051943913300005457Corn RhizosphereHGPKGIVRLRMGNVEEGGLGAGRTLLNKTARRSEKFVSTSVADLFVGRHSAGRPGLDFASVGQASASVSGRT*
Ga0070706_10127029413300005467Corn, Switchgrass And Miscanthus RhizosphereMGSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSGSGRI*
Ga0070707_10178934213300005468Corn, Switchgrass And Miscanthus RhizosphereVRLRMGSVEEGGLGAGRTLLNKTARRSEQFVSTGVADLFAGRRFAGRPGLDFAFVGQASDSGSGRT*
Ga0070699_10161714633300005518Corn, Switchgrass And Miscanthus RhizosphereVRLRIGSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFASVGQA
Ga0066703_1071483623300005568SoilMGSVEEGGLGAGRTLLNKTARRSEQFVSISVAALFVGRRSAGRPGLDFASVGQASDSGSGRT
Ga0070764_1061251613300005712SoilVRLRMGSVEEGGLGAGRTLLNKTARRSEQFVSIGVADLFVGRRSTGRPGLDFASVGQASDSG
Ga0075024_10029011223300006047WatershedsMIAVLKTARRSEQLVFITVADLFVGRRSAGRPGLDFASVGQASDSGSGRA*
Ga0075026_10085199613300006057WatershedsLKTARRSEQLVSISAADLFVDRRSAGRPGLDFASVGQASDSGSGRA*
Ga0075018_1052638513300006172WatershedsVLNKTARRSEQFVSTSVAYLFASRRFAGRPDLDLAFVGQASDSGSG
Ga0075520_134627613300006795Arctic Peat SoilPKSGKSKQADWEPGRTLLNKTARGSEQFVSISVADLFVGRRSTGRPGLDFAFVGQASDPGSGRS*
Ga0075425_10214756113300006854Populus RhizosphereMGIVRLRMGSVEEGGLGAGRTQLNKTTRRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSDSGRT*
Ga0075434_10198889513300006871Populus RhizosphereMGSVEEGGLGAGRTQLNKTTRRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSGSGRTWRTNRPVDS
Ga0099829_1121700523300009038Vadose Zone SoilMGSVEEGRLGAGRTLLNKTARRSEQFVSISVADLFVGRYSAGRPGLDFASVG*
Ga0099830_1141469513300009088Vadose Zone SoilVRLRMGSVEEGGLGAGRTLLNKTARRSEQFVSLRVADLFVGRRSAGCPGFDFASVGQAPDSGSGRT*
Ga0105250_1028311823300009092Switchgrass RhizosphereTARRSEQFVSISAADRFVDRRSAGRPGLDFASVGQTYDSGSVRT*
Ga0105243_1057131813300009148Miscanthus RhizosphereMGNVEEGGLGAGRTLLNKTARRSEKFVSTSVADLFVGRHSAGRPGLDFASVGQA
Ga0134128_1039965033300010373Terrestrial SoilMDRSGIVRLRMGNFEDGGLGAGRALLNKTARRSEQFVSIGVADLFVGRRSVGRPGSDFASVG*
Ga0134121_1136293813300010401Terrestrial SoilMDRSGIVRLRMGNFEDGGLGAGRALLNKTARRSEQFVSIGVADLFVGRRSAGRPGLDFASVGQTSDLGSGRT*
Ga0126351_103689713300010860Boreal Forest SoilPKGIVRLRMGSVEEDGLGAGRTLLNKTARRSEQFVSISVADLFVGRHSAGRPGLDFASVCQASDSNSGRT*
Ga0126350_1065886333300010880Boreal Forest SoilVRLRMESVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRFAGRPALDFASVDQASNSDSGRT*
Ga0150983_1475051833300011120Forest SoilMGSVEEGGLGAGRTLLNKTARRSEQFVSIGVAALFVGRRSAGRPGLDFASVGQA
Ga0150983_1475436713300011120Forest SoilMGSVEEGGLGAGGILLNKTARRSEQFVSIGVAALFVGRRSAGRPGLDFASVGQA
Ga0137392_1045193323300011269Vadose Zone SoilVRLRMGSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSGSGRT*
Ga0137362_1168959313300012205Vadose Zone SoilRMGSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSGSGRT*
Ga0137368_1052510523300012358Vadose Zone SoilVRLRMGSVEEGGLGAGRTLLNKTAHRSEQFVSISVADLFVGRHSAGRPRLDFASVGQASDSVSGRT*
Ga0137385_1096016623300012359Vadose Zone SoilRLRMGSVEEGGLGAGRTLLNKTAHRGEQFASISVADLFVGRHSAGRPGLDFASVGQASDSVSGRT*
Ga0137395_1057236423300012917Vadose Zone SoilMGGVEEGGLKAGRTLLNKTARRSEQFVSISVADLFVGRRCAGRPGLEFASVGQASDSGSGRASR
Ga0137416_1066883213300012927Vadose Zone SoilLLNKTARRSEQFVSISVADLFVGRRSAGRPSLDFASVGQASDSGSGRT*
Ga0157376_1192237413300014969Miscanthus RhizosphereMGSVEEGGLGAGRTLLNKTARRSEKFVSTSVADLFVGRHSAGRPGLDFASANYR
Ga0184620_1032384813300018051Groundwater SedimentMGSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVDRRSAGRPGLDFASVGQAADSGSGRTERTNRPVDSA
Ga0190268_1033139413300018466SoilGYGPKGIVRLIMGSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRSAGRSGLDFAPVGQAPDSGSGRT
Ga0193754_103872033300019872SoilMGSVEEGGLGAGRTQLNKTTRRSEQFVSISVADLFVGRRSAGRPGLDFAS
Ga0193713_101627743300019882SoilSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSGSGRT
Ga0193727_107117513300019886SoilMGSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSGSGRTW
Ga0193743_120947723300019889SoilVRLRMGSVEEGGLGAGRTLLNKTAHRSEQFVSISVADLFVGRHSAGRPGLDFASVGQASDSVSGRT
Ga0193730_105218623300020002SoilLPPLRHGPKGIVRLRMGSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSGSGRT
Ga0193721_110989013300020018SoilMVSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSGSGRT
Ga0193726_109449033300020021SoilLRMGSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSGSGRT
Ga0179592_1014985133300020199Vadose Zone SoilAGRTLLNKTARRSEQFVSISVADLFVGRHSAGRPGLDFASVGQASDSVSGRT
Ga0179592_1015118313300020199Vadose Zone SoilMGSVEEGGLGAGRTLLNNTARRSEQFVSISVADLFVGRHSAGRPGLNFASVGQASDSGSGRT
Ga0210399_1102715313300020581SoilMGSVEGGGLGAGRTLLNKTARRSEQFVSIGVVDLFVGRRSAGRPGLDLASVGQASDSGSGRT
Ga0210399_1120564723300020581SoilVRLTMGSVEEGGLGAGRTLLDKAARRSEQFVSISVADLFVGRRPAGRPGLDFASVGQASDSGSGRT
Ga0210406_1053776233300021168SoilALRAWIEGHRAPKNGSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASESGSGRT
Ga0210405_1113195113300021171SoilMGRVEEGGLGAGRTLLNKTARRGEQFVSVRVAALFVGRRSAGRPRLDFASVGQASDSCSGRT
Ga0210396_1146041913300021180SoilMGSVEEGGLGAGRTLLNKTGRRSEQFVSIGVADLFVGRRSAGRSALDFASVGQASDSGSGRT
Ga0210397_1129821623300021403SoilMGSVEEGGLGAGRTLLNKTARRSEQFVSISVAALFVDRRSAGCPGLDFASVGQASDSGSGRTWRTNRPVD
Ga0193709_109696513300021411SoilVRLRMGSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRHSAGRPGLDFASVGQASDSVSGRT
Ga0193695_101987923300021418SoilVRLRMGSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSGSGRT
Ga0210394_1174825313300021420SoilAGRTLLDKAARRSEQFVSISVADLFVGRRPAGRPGLDFASVGQASDSGSGRT
Ga0210392_1063307823300021475SoilALNKTARRSEQFVSIGVVDLFVGRRSAGRPGLDLASVGQASDSGSGRT
Ga0210402_1042740313300021478SoilGRTLLNKTARGSEQFVSISVANLFVGRRSAGRPGLDFASVGQASDSGSGRT
Ga0224712_1064404513300022467Corn, Switchgrass And Miscanthus RhizosphereMDRSGIVRLRMGNFEDGGLGAGRALLNKTARRSEQFVSIGVADLFVGRRSVGRPGSDFASVG
Ga0208850_102094113300025457Arctic Peat SoilVCLRMGSVEEGGLGAGRTLLNKTVRRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSGSGRT
Ga0208078_109384523300025544Arctic Peat SoilVRLRVGSVEAGRLGAGRTLLNKTARGSEQFVSTSVADLFVGRRSAGRPGLDFASVGQASDSDSGRT
Ga0207692_1089384713300025898Corn, Switchgrass And Miscanthus RhizosphereMGSVEEGGLGAGGTLLNKTARRSDQFVSTSVADLFVGRRSAGRPGLDFASVGQASDSG
Ga0207663_1063249413300025916Corn, Switchgrass And Miscanthus RhizosphereTLLTARRSEQFVSISASDLFVDRRSAGRPGLDFASVGQANDSGSGRT
Ga0257149_104629723300026355SoilGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSGSGRT
Ga0257171_106004013300026377SoilVRLRMGSVEEGGLGTGRTLLNKTARRSEQFVSIGVADLFVDRRSAGRPGLDFASVGQAFDSGSGRT
Ga0257169_104503933300026469SoilMGSVEEGGLGAGRTLLNKTARRSEQFVSTSVAYLFASRRFAGRPGLDLAFVGQASDSGSGRTQRTNRPIDSADHT
Ga0257165_106036713300026507SoilFRYTQHGPKGIVRLRMGSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSGSGRT
Ga0257161_108249513300026508SoilVRLRMGSVEGGLGAGRPLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFAFVGQASDTGSGRT
Ga0257158_107934423300026515SoilGRTLLNKTARQSEQFVSISVADLFVGRRSAGRPGLDFASVGQAFDSGSGRT
Ga0209056_1023961543300026538SoilVRLRMGGVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSGSGRT
Ga0209648_1034481613300026551Grasslands SoilGLGAGGTLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFVSVGQASDSGSGRT
Ga0208841_10489833300026721SoilVRLRTGSVEEGGLGAGRTLLNKTARRSEQFVSTSVAYLFVGRRSAGRPGLDLAF
Ga0209623_101139313300026880Forest SoilVRLRMGSVEEGGLGAGRTLLNRTARRSEQFVSISVAALFVGRRSAGRPGLDFASVGQASDSGSGRT
Ga0207949_101981823300026999Forest SoilMVRLRMGSVEEGGLGAGRTLLNKIARGSEQFVSISVAALFVGRRSAGRPGLDFASVGQAPDSDTGRT
Ga0207948_103435623300027174Forest SoilVRLGMGSVEEGGLGAGRTLLNKTARRSEQFVSIPVGDLFVGRHSAGRPGLDFASVGQASDSGSGRT
Ga0208241_105449013300027297Forest SoilVRRRMGSVKEGGLGTRRTLLNKTVRRSEQFVSISVADLFVGRHSAGRPGLDFAFVGQASDSDSGRT
Ga0208995_101440223300027388Forest SoilVRLRMGSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRHSAGRPGLDFASVGQASDSDSGRT
Ga0209106_106000643300027616Forest SoilMGSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSGS
Ga0209588_119063323300027671Vadose Zone SoilGSVEEGGLGAGRTLLNKTARQSEQFVSISVAYLFVGRRSAGRPGLDFASVGQASDSDSGR
Ga0209328_1009635123300027727Forest SoilKGIVRLRMRSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFASVGQTSDTGSGRT
Ga0209701_1074230913300027862Vadose Zone SoilGPKGIVRLRMGSVEEGGLGAGRTLLNKTARRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSGSGRT
Ga0209283_1030031923300027875Vadose Zone SoilMGSVEEGRLGAGRTLLNKTARRSEQFVSISVADLFVGRYSAGRPGLDFASVG
Ga0209283_1045128923300027875Vadose Zone SoilRLRMGSVEEGGLGAGRTLLNKTARRSEQFVSLRVADLFVGRRSAGCPGFDFASVGQAPDSGSGRT
Ga0209624_1086242913300027895Forest SoilVRLRVGSVEEGGLGAGRALLNKTARGSEQFVSISVANLFVGRRPAGCPGLDFASVGQAPDSGSGR
Ga0209488_1101986013300027903Vadose Zone SoilVRLRTASVEEGGLGAGRTQLNKTTRRSEQFVSISVADLFVGRRSAGRPGLDFASVGKASDSGSGRTYRTNRPV
Ga0209526_1011401913300028047Forest SoilMGSVEEGGLGAGGTLLNKTTCRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDS
Ga0209526_1065060613300028047Forest SoilVRLRVGSVEAGRLGAGRTLLNKTARGSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSGSGRT
Ga0307305_1016413323300028807SoilVRLRMGSVEEGGLGAGRTQLNKTTRRSEQFVSISVADLFVGRRSAGRPGLDFASVGQASDSDSGRT
Ga0308183_107837513300030988SoilMVRLTMGSVEEGGLGAGRALLNKTARRSEQFVSISVADLFVGRHSAGRPSLGLASVGQASDSVSGRT
Ga0265760_1027043723300031090SoilVRLRMGRVEEGGLGAGRTLLNKTARRSEQFVSVGVAALFVGRRSAGRPRLDFASVGQASDSCSGRT
Ga0307480_100780013300031677Hardwood Forest SoilTLLTARRSEQFVSISAADLSVDRRSAGRPGLDFASVGQASASVSGRT
Ga0316038_10771513300031868SoilMFHSHLLRGHGPKGIVRLRVGSVEEGGLGAGRALLNKTARGSEQFVSISVANLFVGRRPAGCPGLDF
Ga0307479_1011766163300031962Hardwood Forest SoilMGSVEEGGLGAGRTLLNKTARRSEQFVSIGVAALFVGRRSAGRPGLDFASVGQASDSGSGRT
Ga0310890_1129486213300032075SoilGSVEEGGLGAGRTLLNKTVRRSEKFVSTSVADLFVGRHSAGRPGLDFASVGQAYNSGSGR
Ga0316051_101280913300032119SoilVRLRVGSVEEGGLGAGRTLLNKTARGSEQFVSISVADLFVGRRPAGRPGLDFASVGQASDSGSGR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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